Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98597.t1 | XP_013455783.2 | 96.7 | 271 | 9 | 0 | 1 | 271 | 1 | 271 | 1.20E-142 | 515.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98597.t1 | Q94KL7 | 56.5 | 271 | 114 | 1 | 2 | 268 | 3 | 273 | 1.3e-79 | 297.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98597.t1 | A0A396I496 | 96.7 | 271 | 9 | 0 | 1 | 271 | 1 | 271 | 8.9e-143 | 515.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene98597 | 0.847177 | 1.36E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene98597 | 0.830275 | 3.22E-55 | -1.69E-46 |
| MS.gene050414 | MS.gene98597 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene98597 | 0.820619 | 6.23E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene98597 | 0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene98597 | 0.820456 | 6.79E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene98597 | 0.813329 | 2.70E-51 | -1.69E-46 |
| MS.gene052493 | MS.gene98597 | 0.81245 | 4.21E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene98597 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene98597 | 0.810163 | 1.32E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene98597 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene98597 | 0.837257 | 5.78E-57 | -1.69E-46 |
| MS.gene054178 | MS.gene98597 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene98597 | 0.856013 | 4.29E-62 | -1.69E-46 |
| MS.gene054893 | MS.gene98597 | 0.857787 | 1.29E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene98597 | 0.804701 | 1.90E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene98597 | 0.802641 | 5.09E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene98597 | 0.803255 | 3.80E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene98597 | 0.8362 | 1.08E-56 | -1.69E-46 |
| MS.gene057034 | MS.gene98597 | 0.808253 | 3.39E-50 | -1.69E-46 |
| MS.gene057155 | MS.gene98597 | 0.837325 | 5.56E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene98597 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene98597 | 0.814958 | 1.18E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene98597 | 0.806126 | 9.57E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene98597 | 0.801702 | 7.95E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene98597 | 0.803075 | 4.14E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene98597 | 0.8119 | 5.55E-51 | -1.69E-46 |
| MS.gene060412 | MS.gene98597 | 0.80737 | 5.23E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene98597 | 0.802606 | 5.18E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene98597 | 0.810772 | 9.76E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene98597 | 0.81826 | 2.15E-52 | -1.69E-46 |
| MS.gene060851 | MS.gene98597 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene98597 | 0.82173 | 3.46E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene98597 | 0.848275 | 6.80E-60 | -1.69E-46 |
| MS.gene060933 | MS.gene98597 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene98597 | 0.802781 | 4.77E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene98597 | 0.805652 | 1.20E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98597.t1 | MTR_4g052300 | 95.817 | 263 | 11 | 0 | 9 | 271 | 3 | 265 | 0.0 | 513 |
| MS.gene98597.t1 | MTR_4g052350 | 82.288 | 271 | 48 | 0 | 1 | 271 | 1 | 271 | 1.66e-167 | 464 |
| MS.gene98597.t1 | MTR_4g052340 | 83.764 | 271 | 44 | 0 | 1 | 271 | 1 | 271 | 2.36e-166 | 461 |
| MS.gene98597.t1 | MTR_4g052320 | 87.121 | 264 | 33 | 1 | 9 | 271 | 3 | 266 | 2.50e-161 | 448 |
| MS.gene98597.t1 | MTR_7g105460 | 58.238 | 261 | 106 | 1 | 13 | 270 | 12 | 272 | 2.31e-100 | 294 |
| MS.gene98597.t1 | MTR_7g071680 | 51.111 | 270 | 107 | 5 | 12 | 258 | 27 | 294 | 1.54e-87 | 263 |
| MS.gene98597.t1 | MTR_7g107670 | 48.881 | 268 | 127 | 4 | 12 | 270 | 31 | 297 | 3.50e-77 | 236 |
| MS.gene98597.t1 | MTR_7g110130 | 49.213 | 254 | 125 | 2 | 12 | 261 | 4 | 257 | 8.98e-77 | 234 |
| MS.gene98597.t1 | MTR_2g090165 | 49.804 | 255 | 121 | 4 | 12 | 261 | 4 | 256 | 1.97e-76 | 233 |
| MS.gene98597.t1 | MTR_7g083870 | 48.519 | 270 | 124 | 5 | 12 | 269 | 33 | 299 | 6.90e-76 | 233 |
| MS.gene98597.t1 | MTR_7g105590 | 60.326 | 184 | 73 | 0 | 12 | 195 | 6 | 189 | 1.29e-75 | 229 |
| MS.gene98597.t1 | MTR_7g105580 | 49.804 | 255 | 103 | 4 | 12 | 261 | 6 | 240 | 3.83e-75 | 229 |
| MS.gene98597.t1 | MTR_6g023590 | 45.594 | 261 | 136 | 4 | 1 | 256 | 1 | 260 | 1.46e-74 | 228 |
| MS.gene98597.t1 | MTR_3g020670 | 49.064 | 267 | 126 | 3 | 12 | 268 | 14 | 280 | 2.39e-74 | 228 |
| MS.gene98597.t1 | MTR_7g110140 | 48.606 | 251 | 124 | 3 | 13 | 259 | 5 | 254 | 2.57e-73 | 225 |
| MS.gene98597.t1 | MTR_4g078630 | 46.038 | 265 | 125 | 4 | 10 | 261 | 15 | 274 | 6.01e-71 | 220 |
| MS.gene98597.t1 | MTR_7g110160 | 47.638 | 254 | 110 | 3 | 12 | 261 | 4 | 238 | 8.73e-71 | 218 |
| MS.gene98597.t1 | MTR_7g105570 | 47.692 | 260 | 82 | 2 | 14 | 270 | 21 | 229 | 3.23e-70 | 216 |
| MS.gene98597.t1 | MTR_6g023950 | 46.743 | 261 | 133 | 4 | 1 | 256 | 1 | 260 | 5.01e-69 | 214 |
| MS.gene98597.t1 | MTR_6g023610 | 45.850 | 253 | 132 | 3 | 8 | 255 | 7 | 259 | 1.79e-68 | 213 |
| MS.gene98597.t1 | MTR_6g023990 | 43.775 | 249 | 135 | 3 | 13 | 256 | 13 | 261 | 1.15e-67 | 211 |
| MS.gene98597.t1 | MTR_6g023910 | 46.215 | 251 | 124 | 5 | 13 | 255 | 12 | 259 | 1.41e-66 | 208 |
| MS.gene98597.t1 | MTR_6g023600 | 44.828 | 261 | 138 | 4 | 1 | 256 | 1 | 260 | 6.38e-66 | 206 |
| MS.gene98597.t1 | MTR_6g035395 | 45.076 | 264 | 123 | 5 | 12 | 271 | 3 | 248 | 8.43e-65 | 203 |
| MS.gene98597.t1 | MTR_6g023600 | 44.061 | 261 | 134 | 5 | 1 | 256 | 1 | 254 | 3.36e-61 | 194 |
| MS.gene98597.t1 | MTR_4g084800 | 62.879 | 132 | 49 | 0 | 12 | 143 | 11 | 142 | 5.92e-56 | 177 |
| MS.gene98597.t1 | MTR_3g113870 | 43.694 | 222 | 114 | 3 | 5 | 221 | 17 | 232 | 3.71e-52 | 170 |
| MS.gene98597.t1 | MTR_3g085740 | 32.157 | 255 | 163 | 6 | 8 | 257 | 69 | 318 | 1.30e-34 | 127 |
| MS.gene98597.t1 | MTR_4g058840 | 31.136 | 273 | 176 | 7 | 4 | 267 | 1 | 270 | 2.30e-28 | 109 |
| MS.gene98597.t1 | MTR_4g058820 | 31.136 | 273 | 176 | 7 | 4 | 267 | 1 | 270 | 2.30e-28 | 109 |
| MS.gene98597.t1 | MTR_1g082760 | 33.074 | 257 | 158 | 6 | 13 | 259 | 39 | 291 | 9.97e-28 | 108 |
| MS.gene98597.t1 | MTR_4g058810 | 30.370 | 270 | 162 | 8 | 14 | 267 | 11 | 270 | 4.79e-26 | 103 |
| MS.gene98597.t1 | MTR_1g051165 | 29.963 | 267 | 164 | 9 | 11 | 259 | 11 | 272 | 9.47e-26 | 102 |
| MS.gene98597.t1 | MTR_7g113650 | 29.615 | 260 | 163 | 8 | 13 | 259 | 39 | 291 | 7.08e-25 | 100 |
| MS.gene98597.t1 | MTR_4g131740 | 31.698 | 265 | 160 | 10 | 9 | 259 | 35 | 292 | 7.57e-24 | 98.2 |
| MS.gene98597.t1 | MTR_4g086400 | 34.426 | 244 | 134 | 9 | 16 | 244 | 6 | 238 | 4.29e-22 | 95.9 |
| MS.gene98597.t1 | MTR_1196s0010 | 29.183 | 257 | 162 | 7 | 8 | 256 | 268 | 512 | 2.85e-21 | 93.2 |
| MS.gene98597.t1 | MTR_3g068155 | 29.200 | 250 | 170 | 6 | 14 | 259 | 19 | 265 | 5.53e-21 | 90.1 |
| MS.gene98597.t1 | MTR_8g442750 | 30.037 | 273 | 163 | 8 | 14 | 268 | 14 | 276 | 2.78e-20 | 88.6 |
| MS.gene98597.t1 | MTR_4g086410 | 31.818 | 242 | 143 | 6 | 16 | 244 | 6 | 238 | 3.15e-20 | 90.5 |
| MS.gene98597.t1 | MTR_4g064887 | 27.843 | 255 | 167 | 7 | 14 | 259 | 15 | 261 | 7.42e-20 | 86.7 |
| MS.gene98597.t1 | MTR_7g094510 | 28.309 | 272 | 160 | 10 | 1 | 256 | 1 | 253 | 1.04e-19 | 86.3 |
| MS.gene98597.t1 | MTR_3g068070 | 28.682 | 258 | 169 | 8 | 14 | 264 | 15 | 264 | 1.72e-19 | 85.9 |
| MS.gene98597.t1 | MTR_4g132850 | 26.587 | 252 | 171 | 6 | 12 | 257 | 5 | 248 | 2.51e-19 | 85.1 |
| MS.gene98597.t1 | MTR_8g096580 | 29.386 | 228 | 147 | 6 | 14 | 235 | 45 | 264 | 1.16e-18 | 84.3 |
| MS.gene98597.t1 | MTR_3g068175 | 27.519 | 258 | 178 | 5 | 8 | 259 | 9 | 263 | 1.30e-18 | 83.6 |
| MS.gene98597.t1 | MTR_7g063390 | 29.630 | 270 | 175 | 8 | 1 | 259 | 1 | 266 | 1.98e-18 | 82.8 |
| MS.gene98597.t1 | MTR_4g097510 | 29.670 | 182 | 124 | 3 | 15 | 195 | 3 | 181 | 3.84e-18 | 82.4 |
| MS.gene98597.t1 | MTR_3g068085 | 28.788 | 264 | 161 | 10 | 14 | 264 | 15 | 264 | 5.05e-18 | 81.6 |
| MS.gene98597.t1 | MTR_7g063320 | 30.556 | 252 | 162 | 7 | 14 | 256 | 15 | 262 | 9.76e-17 | 78.2 |
| MS.gene98597.t1 | MTR_7g105560 | 64.286 | 56 | 20 | 0 | 12 | 67 | 11 | 66 | 1.34e-16 | 75.5 |
| MS.gene98597.t1 | MTR_3g068175 | 27.099 | 262 | 178 | 6 | 8 | 259 | 9 | 267 | 1.81e-16 | 77.4 |
| MS.gene98597.t1 | MTR_3g068065 | 25.703 | 249 | 178 | 6 | 14 | 258 | 17 | 262 | 1.81e-16 | 77.4 |
| MS.gene98597.t1 | MTR_4g064883 | 27.626 | 257 | 177 | 7 | 8 | 259 | 8 | 260 | 2.26e-16 | 77.0 |
| MS.gene98597.t1 | MTR_7g063330 | 26.877 | 253 | 173 | 7 | 14 | 258 | 15 | 263 | 1.62e-15 | 74.7 |
| MS.gene98597.t1 | MTR_7g063270 | 27.381 | 252 | 173 | 6 | 14 | 258 | 16 | 264 | 2.30e-15 | 74.3 |
| MS.gene98597.t1 | MTR_7g094520 | 26.587 | 252 | 172 | 5 | 14 | 256 | 11 | 258 | 3.24e-15 | 73.9 |
| MS.gene98597.t1 | MTR_4g064887 | 28.351 | 194 | 130 | 4 | 14 | 202 | 15 | 204 | 1.09e-14 | 71.6 |
| MS.gene98597.t1 | MTR_3g087850 | 30.000 | 180 | 118 | 4 | 18 | 195 | 30 | 203 | 3.45e-14 | 71.2 |
| MS.gene98597.t1 | MTR_7g063360 | 28.148 | 270 | 179 | 8 | 1 | 259 | 1 | 266 | 6.38e-14 | 70.1 |
| MS.gene98597.t1 | MTR_7g063260 | 26.877 | 253 | 174 | 5 | 14 | 258 | 16 | 265 | 9.81e-14 | 69.7 |
| MS.gene98597.t1 | MTR_8g096620 | 25.238 | 210 | 151 | 4 | 16 | 222 | 47 | 253 | 1.88e-13 | 69.7 |
| MS.gene98597.t1 | MTR_3g087860 | 29.518 | 166 | 110 | 3 | 31 | 195 | 29 | 188 | 2.42e-13 | 68.9 |
| MS.gene98597.t1 | MTR_4g058830 | 30.460 | 174 | 101 | 5 | 105 | 267 | 52 | 216 | 6.74e-13 | 66.6 |
| MS.gene98597.t1 | MTR_4g064883 | 29.000 | 200 | 135 | 5 | 8 | 203 | 8 | 204 | 9.59e-13 | 66.2 |
| MS.gene98597.t1 | MTR_8g044240 | 28.824 | 170 | 115 | 2 | 20 | 183 | 75 | 244 | 1.27e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98597.t1 | AT3G51680 | 52.190 | 274 | 110 | 6 | 12 | 266 | 30 | 301 | 5.99e-88 | 264 |
| MS.gene98597.t1 | AT2G47140 | 50.000 | 252 | 121 | 3 | 12 | 259 | 4 | 254 | 2.42e-78 | 238 |
| MS.gene98597.t1 | AT1G52340 | 49.446 | 271 | 122 | 3 | 12 | 268 | 16 | 285 | 1.17e-77 | 237 |
| MS.gene98597.t1 | AT3G26770 | 48.450 | 258 | 119 | 4 | 12 | 258 | 39 | 293 | 3.41e-75 | 231 |
| MS.gene98597.t1 | AT4G03140 | 51.373 | 255 | 115 | 3 | 12 | 258 | 76 | 329 | 5.66e-74 | 229 |
| MS.gene98597.t1 | AT3G26760 | 45.076 | 264 | 133 | 3 | 6 | 258 | 28 | 290 | 2.66e-73 | 226 |
| MS.gene98597.t1 | AT3G29250 | 47.036 | 253 | 125 | 4 | 13 | 259 | 5 | 254 | 1.03e-72 | 224 |
| MS.gene98597.t1 | AT3G29250 | 47.036 | 253 | 125 | 4 | 13 | 259 | 41 | 290 | 4.65e-72 | 223 |
| MS.gene98597.t1 | AT3G29250 | 46.875 | 256 | 126 | 5 | 11 | 259 | 40 | 292 | 3.05e-71 | 221 |
| MS.gene98597.t1 | AT2G47130 | 47.619 | 252 | 124 | 4 | 13 | 259 | 5 | 253 | 5.72e-71 | 219 |
| MS.gene98597.t1 | AT2G47120 | 46.875 | 256 | 127 | 5 | 9 | 259 | 2 | 253 | 2.61e-70 | 218 |
| MS.gene98597.t1 | AT2G47120 | 47.222 | 252 | 124 | 5 | 13 | 259 | 5 | 252 | 1.01e-69 | 216 |
| MS.gene98597.t1 | AT3G29260 | 46.429 | 252 | 129 | 4 | 12 | 259 | 4 | 253 | 2.01e-67 | 210 |
| MS.gene98597.t1 | AT3G42960 | 43.820 | 267 | 133 | 6 | 7 | 260 | 1 | 263 | 1.92e-56 | 182 |
| MS.gene98597.t1 | AT1G24360 | 30.385 | 260 | 159 | 7 | 11 | 259 | 71 | 319 | 8.10e-31 | 117 |
| MS.gene98597.t1 | AT3G55290 | 33.203 | 256 | 159 | 7 | 14 | 259 | 17 | 270 | 2.22e-30 | 115 |
| MS.gene98597.t1 | AT3G55290 | 33.203 | 256 | 159 | 7 | 14 | 259 | 18 | 271 | 2.24e-30 | 115 |
| MS.gene98597.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 15 | 269 | 5.28e-29 | 111 |
| MS.gene98597.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 19 | 273 | 5.32e-29 | 111 |
| MS.gene98597.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 22 | 276 | 5.36e-29 | 111 |
| MS.gene98597.t1 | AT2G17845 | 31.203 | 266 | 168 | 7 | 14 | 267 | 47 | 309 | 6.21e-29 | 112 |
| MS.gene98597.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 17 | 271 | 6.36e-29 | 111 |
| MS.gene98597.t1 | AT1G62610 | 30.859 | 256 | 166 | 6 | 14 | 259 | 14 | 268 | 2.90e-28 | 109 |
| MS.gene98597.t1 | AT1G62610 | 30.859 | 256 | 166 | 6 | 14 | 259 | 13 | 267 | 3.22e-28 | 109 |
| MS.gene98597.t1 | AT1G62610 | 30.859 | 256 | 166 | 6 | 14 | 259 | 15 | 269 | 3.53e-28 | 109 |
| MS.gene98597.t1 | AT1G62610 | 30.859 | 256 | 166 | 6 | 14 | 259 | 19 | 273 | 3.67e-28 | 109 |
| MS.gene98597.t1 | AT3G55310 | 32.031 | 256 | 162 | 7 | 14 | 259 | 17 | 270 | 1.58e-27 | 107 |
| MS.gene98597.t1 | AT3G46170 | 31.179 | 263 | 157 | 8 | 13 | 259 | 25 | 279 | 3.70e-27 | 107 |
| MS.gene98597.t1 | AT2G30670 | 30.000 | 260 | 175 | 4 | 14 | 270 | 7 | 262 | 2.49e-25 | 101 |
| MS.gene98597.t1 | AT1G54870 | 31.538 | 260 | 158 | 9 | 13 | 259 | 81 | 333 | 2.42e-24 | 100 |
| MS.gene98597.t1 | AT1G54870 | 31.538 | 260 | 158 | 9 | 13 | 259 | 83 | 335 | 2.70e-24 | 100 |
| MS.gene98597.t1 | AT2G47150 | 32.677 | 254 | 112 | 8 | 14 | 266 | 1 | 196 | 4.05e-24 | 96.7 |
| MS.gene98597.t1 | AT3G05260 | 29.183 | 257 | 167 | 6 | 13 | 259 | 36 | 287 | 1.15e-22 | 94.7 |
| MS.gene98597.t1 | AT2G29330 | 29.297 | 256 | 170 | 6 | 14 | 264 | 7 | 256 | 1.47e-22 | 94.0 |
| MS.gene98597.t1 | AT2G29310 | 30.400 | 250 | 167 | 5 | 14 | 259 | 7 | 253 | 4.66e-22 | 92.8 |
| MS.gene98597.t1 | AT2G29300 | 31.518 | 257 | 164 | 8 | 14 | 264 | 7 | 257 | 2.52e-21 | 90.9 |
| MS.gene98597.t1 | AT2G29340 | 28.112 | 249 | 174 | 3 | 14 | 259 | 7 | 253 | 2.71e-21 | 90.5 |
| MS.gene98597.t1 | AT1G07450 | 29.804 | 255 | 169 | 7 | 14 | 264 | 8 | 256 | 3.64e-21 | 90.1 |
| MS.gene98597.t1 | AT2G29340 | 28.346 | 254 | 175 | 4 | 14 | 264 | 7 | 256 | 5.58e-21 | 90.5 |
| MS.gene98597.t1 | AT5G06060 | 27.843 | 255 | 175 | 6 | 14 | 264 | 9 | 258 | 8.13e-21 | 89.4 |
| MS.gene98597.t1 | AT1G49670 | 35.000 | 200 | 116 | 5 | 16 | 202 | 6 | 204 | 1.04e-20 | 92.0 |
| MS.gene98597.t1 | AT1G49670 | 35.000 | 200 | 116 | 5 | 16 | 202 | 6 | 204 | 1.17e-20 | 91.7 |
| MS.gene98597.t1 | AT4G05530 | 31.225 | 253 | 158 | 8 | 12 | 257 | 7 | 250 | 1.21e-20 | 88.6 |
| MS.gene98597.t1 | AT2G29300 | 31.076 | 251 | 163 | 7 | 14 | 258 | 7 | 253 | 1.79e-20 | 89.0 |
| MS.gene98597.t1 | AT5G10050 | 31.148 | 183 | 118 | 4 | 15 | 195 | 6 | 182 | 6.91e-20 | 87.0 |
| MS.gene98597.t1 | AT1G07440 | 26.506 | 249 | 177 | 4 | 14 | 259 | 12 | 257 | 2.69e-19 | 85.1 |
| MS.gene98597.t1 | AT5G18210 | 28.517 | 263 | 168 | 6 | 7 | 255 | 1 | 257 | 4.30e-19 | 84.7 |
| MS.gene98597.t1 | AT2G29350 | 27.099 | 262 | 185 | 4 | 6 | 264 | 7 | 265 | 5.84e-19 | 84.3 |
| MS.gene98597.t1 | AT2G29290 | 26.772 | 254 | 179 | 4 | 14 | 264 | 7 | 256 | 6.10e-19 | 84.3 |
| MS.gene98597.t1 | AT2G29370 | 26.641 | 259 | 173 | 6 | 14 | 264 | 16 | 265 | 7.25e-19 | 84.0 |
| MS.gene98597.t1 | AT2G29260 | 26.996 | 263 | 183 | 6 | 2 | 259 | 56 | 314 | 1.83e-18 | 84.0 |
| MS.gene98597.t1 | AT5G65205 | 32.432 | 185 | 113 | 6 | 15 | 195 | 7 | 183 | 2.55e-18 | 82.8 |
| MS.gene98597.t1 | AT5G50690 | 30.939 | 181 | 110 | 5 | 13 | 185 | 44 | 217 | 3.70e-18 | 82.0 |
| MS.gene98597.t1 | AT5G50590 | 30.939 | 181 | 110 | 5 | 13 | 185 | 44 | 217 | 3.70e-18 | 82.0 |
| MS.gene98597.t1 | AT5G50690 | 30.939 | 181 | 110 | 5 | 13 | 185 | 44 | 217 | 8.19e-18 | 81.6 |
| MS.gene98597.t1 | AT5G50590 | 30.939 | 181 | 110 | 5 | 13 | 185 | 44 | 217 | 8.19e-18 | 81.6 |
| MS.gene98597.t1 | AT2G29340 | 30.729 | 192 | 128 | 3 | 14 | 202 | 7 | 196 | 8.62e-18 | 79.7 |
| MS.gene98597.t1 | AT2G29340 | 30.729 | 192 | 128 | 3 | 14 | 202 | 7 | 196 | 8.62e-18 | 79.7 |
| MS.gene98597.t1 | AT2G29150 | 29.057 | 265 | 160 | 8 | 14 | 264 | 16 | 266 | 1.21e-17 | 80.9 |
| MS.gene98597.t1 | AT5G18210 | 27.737 | 274 | 173 | 7 | 7 | 266 | 1 | 263 | 1.36e-17 | 80.9 |
| MS.gene98597.t1 | AT3G47350 | 29.353 | 201 | 126 | 6 | 16 | 208 | 46 | 238 | 1.94e-17 | 80.9 |
| MS.gene98597.t1 | AT3G47350 | 29.353 | 201 | 126 | 6 | 16 | 208 | 46 | 238 | 2.24e-17 | 80.5 |
| MS.gene98597.t1 | AT3G12800 | 29.502 | 261 | 167 | 7 | 14 | 261 | 10 | 266 | 3.22e-17 | 80.1 |
| MS.gene98597.t1 | AT2G29360 | 27.237 | 257 | 176 | 4 | 14 | 264 | 16 | 267 | 3.25e-17 | 79.7 |
| MS.gene98597.t1 | AT1G10310 | 31.100 | 209 | 138 | 5 | 1 | 207 | 3 | 207 | 3.74e-17 | 79.0 |
| MS.gene98597.t1 | AT2G29320 | 29.020 | 255 | 171 | 7 | 11 | 259 | 10 | 260 | 6.49e-17 | 79.0 |
| MS.gene98597.t1 | AT4G13180 | 28.996 | 269 | 175 | 8 | 1 | 259 | 1 | 263 | 8.91e-17 | 78.2 |
| MS.gene98597.t1 | AT2G29310 | 31.250 | 192 | 127 | 3 | 14 | 202 | 7 | 196 | 4.44e-16 | 75.1 |
| MS.gene98597.t1 | AT5G50600 | 25.877 | 228 | 156 | 6 | 14 | 235 | 45 | 265 | 6.40e-16 | 77.0 |
| MS.gene98597.t1 | AT5G50700 | 25.877 | 228 | 156 | 6 | 14 | 235 | 45 | 265 | 6.40e-16 | 77.0 |
| MS.gene98597.t1 | AT2G29350 | 29.442 | 197 | 134 | 3 | 9 | 202 | 10 | 204 | 7.76e-15 | 72.4 |
| MS.gene98597.t1 | AT5G50770 | 31.000 | 200 | 132 | 5 | 16 | 212 | 47 | 243 | 1.33e-14 | 73.2 |
| MS.gene98597.t1 | AT2G29310 | 29.167 | 192 | 131 | 4 | 70 | 259 | 63 | 251 | 1.56e-14 | 72.0 |
| MS.gene98597.t1 | AT5G04900 | 31.361 | 169 | 111 | 2 | 20 | 183 | 83 | 251 | 1.75e-14 | 72.8 |
| MS.gene98597.t1 | AT3G03980 | 26.165 | 279 | 172 | 8 | 1 | 256 | 1 | 268 | 3.07e-14 | 71.2 |
| MS.gene98597.t1 | AT2G29350 | 27.041 | 196 | 139 | 3 | 70 | 264 | 35 | 227 | 1.13e-13 | 68.9 |
| MS.gene98597.t1 | AT2G29290 | 26.020 | 196 | 140 | 3 | 70 | 264 | 48 | 239 | 2.31e-13 | 68.6 |
| MS.gene98597.t1 | AT2G29320 | 31.282 | 195 | 126 | 5 | 11 | 200 | 10 | 201 | 7.60e-13 | 66.2 |
Find 75 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGGACCATTCGGTATT+AGG | 0.230853 | 4.2:+49898308 | MS.gene98597:CDS |
| GCACAAGATTAGTACCCTTT+AGG | 0.313335 | 4.2:-49898423 | None:intergenic |
| AACTTGGTTGGCGTCTTTCT+TGG | 0.316400 | 4.2:+49898133 | MS.gene98597:CDS |
| GCTTGGACCATTCGGTATTA+GGG | 0.326280 | 4.2:+49898309 | MS.gene98597:CDS |
| GCTGCTTCAGCCACATCTTT+AGG | 0.361562 | 4.2:-49898445 | None:intergenic |
| ATAGGAGTCGCAAGAAAATA+AGG | 0.364524 | 4.2:-49898346 | None:intergenic |
| GATATCTAGTTTACCGTACT+TGG | 0.373680 | 4.2:-49898023 | None:intergenic |
| CTTGGAAACGGTTGTGTTCA+CGG | 0.391770 | 4.2:-49898005 | None:intergenic |
| GGTCTTAATCTTGTCATAGA+TGG | 0.404623 | 4.2:+49898505 | MS.gene98597:CDS |
| ACCGGCGGTGCGAGCGGTAT+TGG | 0.413233 | 4.2:+49897827 | MS.gene98597:CDS |
| AAACAAATTATCTGAATTTG+AGG | 0.415679 | 4.2:+49898096 | MS.gene98597:CDS |
| AACTTGTTTATACCTTCTTA+AGG | 0.422188 | 4.2:-49897570 | None:intergenic |
| AGTTCAAAGCACGGCGTTGT+TGG | 0.422887 | 4.2:+49898262 | MS.gene98597:CDS |
| TAGAGTGTCCTTTGTCGTCT+TGG | 0.425344 | 4.2:-49897907 | None:intergenic |
| GATGAGTCTAAGTATGTTAG+TGG | 0.435502 | 4.2:+49898484 | MS.gene98597:CDS |
| GTTCAAAGCACGGCGTTGTT+GGG | 0.435762 | 4.2:+49898263 | MS.gene98597:CDS |
| GTGATTAAAGTTAACTTGGT+TGG | 0.442187 | 4.2:+49898121 | MS.gene98597:CDS |
| AATTTCTTTAAGCTTGATGA+TGG | 0.444421 | 4.2:+49898376 | MS.gene98597:CDS |
| TCTTTAAGCTTGATGATGGT+GGG | 0.454681 | 4.2:+49898380 | MS.gene98597:CDS |
| GGAAGTGATTAAAGTTAACT+TGG | 0.460772 | 4.2:+49898117 | MS.gene98597:CDS |
| AACACAACCGTTTCCAAGTA+CGG | 0.463216 | 4.2:+49898010 | MS.gene98597:CDS |
| GGCTGAAGCAGCTCTGTACT+TGG | 0.463314 | 4.2:+49898456 | MS.gene98597:CDS |
| AGAAACACGGCCATCGAGCT+TGG | 0.469330 | 4.2:+49898292 | MS.gene98597:CDS |
| CAAGACTCTTCTCCGAGCAT+GGG | 0.470310 | 4.2:+49897861 | MS.gene98597:CDS |
| GCCATCGAGCTTGGACCATT+CGG | 0.474487 | 4.2:+49898301 | MS.gene98597:CDS |
| ATTATGCTACCCCGTCGAGC+AGG | 0.480860 | 4.2:-49898184 | None:intergenic |
| GGTAATGATCCCTGCTCGAC+GGG | 0.482899 | 4.2:+49898174 | MS.gene98597:CDS |
| CTTTAAGCTTGATGATGGTG+GGG | 0.483378 | 4.2:+49898381 | MS.gene98597:CDS |
| AATTCATTTACAAGGCTTGA+GGG | 0.492849 | 4.2:+49897788 | MS.gene98597:intron |
| AACAATGGCAACCGTTCCAT+TGG | 0.500328 | 4.2:+49897538 | None:intergenic |
| TAGTTTACCGTACTTGGAAA+CGG | 0.505519 | 4.2:-49898017 | None:intergenic |
| ATTTACAAGGCTTGAGGGGA+AGG | 0.507888 | 4.2:+49897793 | MS.gene98597:intron |
| GCAAGACTCTTCTCCGAGCA+TGG | 0.508760 | 4.2:+49897860 | MS.gene98597:CDS |
| TTCTTTAAGCTTGATGATGG+TGG | 0.511555 | 4.2:+49898379 | MS.gene98597:CDS |
| ACCAATGCTTCCACCAACAC+TGG | 0.517064 | 4.2:-49898215 | None:intergenic |
| ACCAATACCGCTCGCACCGC+CGG | 0.517121 | 4.2:-49897828 | None:intergenic |
| AGTGTTGGTGGAAGCATTGG+TGG | 0.519339 | 4.2:+49898217 | MS.gene98597:CDS |
| CAATTCATTTACAAGGCTTG+AGG | 0.526989 | 4.2:+49897787 | MS.gene98597:intron |
| TTGGAACAAAGCATGCATCA+AGG | 0.538346 | 4.2:+49898152 | MS.gene98597:CDS |
| GCCAGTGTTGGTGGAAGCAT+TGG | 0.538454 | 4.2:+49898214 | MS.gene98597:CDS |
| AACGACTTGAGCCCCATGCT+CGG | 0.539844 | 4.2:-49897873 | None:intergenic |
| ATTAACACAGCCAGTGTTGG+TGG | 0.541696 | 4.2:+49898205 | MS.gene98597:CDS |
| TTAAAGAAATTTGTAACCAT+AGG | 0.542029 | 4.2:-49898364 | None:intergenic |
| GTTCAAACACACAAAATCCA+TGG | 0.551317 | 4.2:-49898546 | None:intergenic |
| CTTAAGGCATTAGAGACCAA+TGG | 0.551569 | 4.2:-49897554 | None:intergenic |
| ACCGAATGGTCCAAGCTCGA+TGG | 0.561776 | 4.2:-49898302 | None:intergenic |
| CTGATCACCGGCGGTGCGAG+CGG | 0.569489 | 4.2:+49897821 | MS.gene98597:CDS |
| GGGAAGGTAGCTCTGATCAC+CGG | 0.573355 | 4.2:+49897809 | MS.gene98597:CDS |
| TGTCACGTCACAACGAACAT+AGG | 0.574819 | 4.2:-49897960 | None:intergenic |
| TGGTCTCTAATGCCTTAAGA+AGG | 0.576031 | 4.2:+49897558 | MS.gene98597:CDS |
| TGGAACAAAGCATGCATCAA+GGG | 0.577105 | 4.2:+49898153 | MS.gene98597:CDS |
| CTTAATCTTGTCATAGATGG+AGG | 0.588109 | 4.2:+49898508 | MS.gene98597:CDS |
| GGGTAATGATCCCTGCTCGA+CGG | 0.588135 | 4.2:+49898173 | MS.gene98597:CDS |
| GATATCATGTTTAACAACGC+TGG | 0.588151 | 4.2:+49898040 | MS.gene98597:CDS |
| AAGACTCTTCTCCGAGCATG+GGG | 0.588198 | 4.2:+49897862 | MS.gene98597:CDS |
| ATAATTAACACAGCCAGTGT+TGG | 0.597332 | 4.2:+49898202 | MS.gene98597:CDS |
| CGGTGCGAGCGGTATTGGTG+AGG | 0.597709 | 4.2:+49897832 | MS.gene98597:CDS |
| GGAGTCAGTGTCGCTAACCA+TGG | 0.600283 | 4.2:+49898529 | MS.gene98597:CDS |
| GCTGAAGCAGCTCTGTACTT+GGG | 0.604618 | 4.2:+49898457 | MS.gene98597:CDS |
| TTATGCTACCCCGTCGAGCA+GGG | 0.605399 | 4.2:-49898183 | None:intergenic |
| TTTAACAACGCTGGCATAAG+CGG | 0.605608 | 4.2:+49898049 | MS.gene98597:CDS |
| GGCATTAGAGACCAATGGAA+CGG | 0.606755 | 4.2:-49897549 | None:intergenic |
| TGTTCGTTGTGACGTGACAA+AGG | 0.616110 | 4.2:+49897964 | MS.gene98597:CDS |
| TTTGAACTTGTGTAGGCATG+TGG | 0.618438 | 4.2:-49898247 | None:intergenic |
| GCCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4.2:-49898254 | None:intergenic |
| TAATCTTGTGCCTAAAGATG+TGG | 0.622940 | 4.2:+49898435 | MS.gene98597:CDS |
| ACAACGAACATAGGAAGAAG+AGG | 0.624459 | 4.2:-49897951 | None:intergenic |
| ATTCATTTACAAGGCTTGAG+GGG | 0.635187 | 4.2:+49897789 | MS.gene98597:intron |
| GCCTACACAAGTTCAAAGCA+CGG | 0.640398 | 4.2:+49898253 | MS.gene98597:CDS |
| AAGGTAGCTCTGATCACCGG+CGG | 0.659291 | 4.2:+49897812 | MS.gene98597:CDS |
| CAATTCACCCTAATACCGAA+TGG | 0.666486 | 4.2:-49898316 | None:intergenic |
| GCTGACATCCAAGACGACAA+AGG | 0.668183 | 4.2:+49897899 | MS.gene98597:CDS |
| ATGCTCGGAGAAGAGTCTTG+CGG | 0.699817 | 4.2:-49897858 | None:intergenic |
| TGTTGGGCTGATGAGAAACA+CGG | 0.702541 | 4.2:+49898279 | MS.gene98597:CDS |
| GTAATGATCCCTGCTCGACG+GGG | 0.704946 | 4.2:+49898175 | MS.gene98597:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTCTGTATATTAA+TGG | + | chr4.2:49897611-49897630 | MS.gene98597:intron | 10.0% |
| !! | GATTTATGAAAAAATATAAG+TGG | + | chr4.2:49897706-49897725 | MS.gene98597:intron | 15.0% |
| !! | TACAGAAAATAAATGAAATA+AGG | - | chr4.2:49897605-49897624 | None:intergenic | 15.0% |
| !!! | TTATTTTACTTAAATTTGTG+TGG | - | chr4.2:49897755-49897774 | None:intergenic | 15.0% |
| !! | AAACAAATTATCTGAATTTG+AGG | + | chr4.2:49898096-49898115 | MS.gene98597:CDS | 20.0% |
| !! | CATAAATCGTATATTTATGT+AGG | - | chr4.2:49897694-49897713 | None:intergenic | 20.0% |
| !! | TTAAAGAAATTTGTAACCAT+AGG | - | chr4.2:49898367-49898386 | None:intergenic | 20.0% |
| !!! | AGATATTTTTTCTAACCTAA+AGG | + | chr4.2:49898408-49898427 | MS.gene98597:CDS | 20.0% |
| !!! | GATATTTTTTCTAACCTAAA+GGG | + | chr4.2:49898409-49898428 | MS.gene98597:CDS | 20.0% |
| ! | AAATATAAGTGGACATTTGA+AGG | + | chr4.2:49897717-49897736 | MS.gene98597:intron | 25.0% |
| ! | AATTTCTTTAAGCTTGATGA+TGG | + | chr4.2:49898376-49898395 | MS.gene98597:CDS | 25.0% |
| !! | AACTTGTTTATACCTTCTTA+AGG | - | chr4.2:49897573-49897592 | None:intergenic | 25.0% |
| !! | CGTATATTTATGTAGGATTT+TGG | - | chr4.2:49897687-49897706 | None:intergenic | 25.0% |
| AATTCATTTACAAGGCTTGA+GGG | + | chr4.2:49897788-49897807 | MS.gene98597:intron | 30.0% | |
| ACATGCTCAATTCATTTACA+AGG | + | chr4.2:49897780-49897799 | MS.gene98597:intron | 30.0% | |
| AGATAATCACAGACTTAAGT+TGG | - | chr4.2:49897664-49897683 | None:intergenic | 30.0% | |
| GGAAGTGATTAAAGTTAACT+TGG | + | chr4.2:49898117-49898136 | MS.gene98597:CDS | 30.0% | |
| ! | GTGATTAAAGTTAACTTGGT+TGG | + | chr4.2:49898121-49898140 | MS.gene98597:CDS | 30.0% |
| ATAATTAACACAGCCAGTGT+TGG | + | chr4.2:49898202-49898221 | MS.gene98597:CDS | 35.0% | |
| ATAGGAGTCGCAAGAAAATA+AGG | - | chr4.2:49898349-49898368 | None:intergenic | 35.0% | |
| ATTCATTTACAAGGCTTGAG+GGG | + | chr4.2:49897789-49897808 | MS.gene98597:intron | 35.0% | |
| CAATTCATTTACAAGGCTTG+AGG | + | chr4.2:49897787-49897806 | MS.gene98597:intron | 35.0% | |
| CTTAATCTTGTCATAGATGG+AGG | + | chr4.2:49898508-49898527 | MS.gene98597:CDS | 35.0% | |
| GATATCATGTTTAACAACGC+TGG | + | chr4.2:49898040-49898059 | MS.gene98597:CDS | 35.0% | |
| GATGAGTCTAAGTATGTTAG+TGG | + | chr4.2:49898484-49898503 | MS.gene98597:CDS | 35.0% | |
| GGTCTTAATCTTGTCATAGA+TGG | + | chr4.2:49898505-49898524 | MS.gene98597:CDS | 35.0% | |
| GTTCAAACACACAAAATCCA+TGG | - | chr4.2:49898549-49898568 | None:intergenic | 35.0% | |
| TAATCTTGTGCCTAAAGATG+TGG | + | chr4.2:49898435-49898454 | MS.gene98597:CDS | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | - | chr4.2:49898020-49898039 | None:intergenic | 35.0% | |
| ! | GATATCTAGTTTACCGTACT+TGG | - | chr4.2:49898026-49898045 | None:intergenic | 35.0% |
| ! | TTATTTTCTTGCGACTCCTA+TGG | + | chr4.2:49898348-49898367 | MS.gene98597:CDS | 35.0% |
| !! | TCTTTAAGCTTGATGATGGT+GGG | + | chr4.2:49898380-49898399 | MS.gene98597:CDS | 35.0% |
| !! | TTCTTTAAGCTTGATGATGG+TGG | + | chr4.2:49898379-49898398 | MS.gene98597:CDS | 35.0% |
| AACACAACCGTTTCCAAGTA+CGG | + | chr4.2:49898010-49898029 | MS.gene98597:CDS | 40.0% | |
| ACAACGAACATAGGAAGAAG+AGG | - | chr4.2:49897954-49897973 | None:intergenic | 40.0% | |
| CAATTCACCCTAATACCGAA+TGG | - | chr4.2:49898319-49898338 | None:intergenic | 40.0% | |
| GCACAAGATTAGTACCCTTT+AGG | - | chr4.2:49898426-49898445 | None:intergenic | 40.0% | |
| TGGAACAAAGCATGCATCAA+GGG | + | chr4.2:49898153-49898172 | MS.gene98597:CDS | 40.0% | |
| TGGTCTCTAATGCCTTAAGA+AGG | + | chr4.2:49897558-49897577 | MS.gene98597:CDS | 40.0% | |
| TTGGAACAAAGCATGCATCA+AGG | + | chr4.2:49898152-49898171 | MS.gene98597:CDS | 40.0% | |
| TTTAACAACGCTGGCATAAG+CGG | + | chr4.2:49898049-49898068 | MS.gene98597:CDS | 40.0% | |
| TTTGAACTTGTGTAGGCATG+TGG | - | chr4.2:49898250-49898269 | None:intergenic | 40.0% | |
| ! | CTTAAGGCATTAGAGACCAA+TGG | - | chr4.2:49897557-49897576 | None:intergenic | 40.0% |
| !! | CTTTAAGCTTGATGATGGTG+GGG | + | chr4.2:49898381-49898400 | MS.gene98597:CDS | 40.0% |
| AACTTGGTTGGCGTCTTTCT+TGG | + | chr4.2:49898133-49898152 | MS.gene98597:CDS | 45.0% | |
| AGCTTGGACCATTCGGTATT+AGG | + | chr4.2:49898308-49898327 | MS.gene98597:CDS | 45.0% | |
| ATTTACAAGGCTTGAGGGGA+AGG | + | chr4.2:49897793-49897812 | MS.gene98597:intron | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | - | chr4.2:49898008-49898027 | None:intergenic | 45.0% | |
| GCCTACACAAGTTCAAAGCA+CGG | + | chr4.2:49898253-49898272 | MS.gene98597:CDS | 45.0% | |
| GCTTGGACCATTCGGTATTA+GGG | + | chr4.2:49898309-49898328 | MS.gene98597:CDS | 45.0% | |
| GGCATTAGAGACCAATGGAA+CGG | - | chr4.2:49897552-49897571 | None:intergenic | 45.0% | |
| TGTCACGTCACAACGAACAT+AGG | - | chr4.2:49897963-49897982 | None:intergenic | 45.0% | |
| TGTTCGTTGTGACGTGACAA+AGG | + | chr4.2:49897964-49897983 | MS.gene98597:CDS | 45.0% | |
| TGTTGGGCTGATGAGAAACA+CGG | + | chr4.2:49898279-49898298 | MS.gene98597:CDS | 45.0% | |
| ! | ATTAACACAGCCAGTGTTGG+TGG | + | chr4.2:49898205-49898224 | MS.gene98597:CDS | 45.0% |
| ! | TAGAGTGTCCTTTGTCGTCT+TGG | - | chr4.2:49897910-49897929 | None:intergenic | 45.0% |
| AAGACTCTTCTCCGAGCATG+GGG | + | chr4.2:49897862-49897881 | MS.gene98597:CDS | 50.0% | |
| ACCAATGCTTCCACCAACAC+TGG | - | chr4.2:49898218-49898237 | None:intergenic | 50.0% | |
| AGTTCAAAGCACGGCGTTGT+TGG | + | chr4.2:49898262-49898281 | MS.gene98597:CDS | 50.0% | |
| ATGCTCGGAGAAGAGTCTTG+CGG | - | chr4.2:49897861-49897880 | None:intergenic | 50.0% | |
| CAAGACTCTTCTCCGAGCAT+GGG | + | chr4.2:49897861-49897880 | MS.gene98597:CDS | 50.0% | |
| GCTGAAGCAGCTCTGTACTT+GGG | + | chr4.2:49898457-49898476 | MS.gene98597:CDS | 50.0% | |
| GCTGACATCCAAGACGACAA+AGG | + | chr4.2:49897899-49897918 | MS.gene98597:CDS | 50.0% | |
| GCTGCTTCAGCCACATCTTT+AGG | - | chr4.2:49898448-49898467 | None:intergenic | 50.0% | |
| GTTCAAAGCACGGCGTTGTT+GGG | + | chr4.2:49898263-49898282 | MS.gene98597:CDS | 50.0% | |
| ! | GCCGTGCTTTGAACTTGTGT+AGG | - | chr4.2:49898257-49898276 | None:intergenic | 50.0% |
| !! | AGTGTTGGTGGAAGCATTGG+TGG | + | chr4.2:49898217-49898236 | MS.gene98597:CDS | 50.0% |
| AACGACTTGAGCCCCATGCT+CGG | - | chr4.2:49897876-49897895 | None:intergenic | 55.0% | |
| ACCGAATGGTCCAAGCTCGA+TGG | - | chr4.2:49898305-49898324 | None:intergenic | 55.0% | |
| AGAAACACGGCCATCGAGCT+TGG | + | chr4.2:49898292-49898311 | MS.gene98597:CDS | 55.0% | |
| ATTATGCTACCCCGTCGAGC+AGG | - | chr4.2:49898187-49898206 | None:intergenic | 55.0% | |
| GCAAGACTCTTCTCCGAGCA+TGG | + | chr4.2:49897860-49897879 | MS.gene98597:CDS | 55.0% | |
| GCCATCGAGCTTGGACCATT+CGG | + | chr4.2:49898301-49898320 | MS.gene98597:CDS | 55.0% | |
| GGCTGAAGCAGCTCTGTACT+TGG | + | chr4.2:49898456-49898475 | MS.gene98597:CDS | 55.0% | |
| GGGTAATGATCCCTGCTCGA+CGG | + | chr4.2:49898173-49898192 | MS.gene98597:CDS | 55.0% | |
| GGTAATGATCCCTGCTCGAC+GGG | + | chr4.2:49898174-49898193 | MS.gene98597:CDS | 55.0% | |
| GTAATGATCCCTGCTCGACG+GGG | + | chr4.2:49898175-49898194 | MS.gene98597:CDS | 55.0% | |
| TTATGCTACCCCGTCGAGCA+GGG | - | chr4.2:49898186-49898205 | None:intergenic | 55.0% | |
| ! | GGAGTCAGTGTCGCTAACCA+TGG | + | chr4.2:49898529-49898548 | MS.gene98597:CDS | 55.0% |
| !! | AAGGTAGCTCTGATCACCGG+CGG | + | chr4.2:49897812-49897831 | MS.gene98597:CDS | 55.0% |
| !! | GCCAGTGTTGGTGGAAGCAT+TGG | + | chr4.2:49898214-49898233 | MS.gene98597:CDS | 55.0% |
| !! | GGGAAGGTAGCTCTGATCAC+CGG | + | chr4.2:49897809-49897828 | MS.gene98597:CDS | 55.0% |
| ACCAATACCGCTCGCACCGC+CGG | - | chr4.2:49897831-49897850 | None:intergenic | 65.0% | |
| !! | CGGTGCGAGCGGTATTGGTG+AGG | + | chr4.2:49897832-49897851 | MS.gene98597:CDS | 65.0% |
| ACCGGCGGTGCGAGCGGTAT+TGG | + | chr4.2:49897827-49897846 | MS.gene98597:CDS | 70.0% | |
| CTGATCACCGGCGGTGCGAG+CGG | + | chr4.2:49897821-49897840 | MS.gene98597:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 49897542 | 49898579 | 49897542 | ID=MS.gene98597 |
| chr4.2 | mRNA | 49897542 | 49898579 | 49897542 | ID=MS.gene98597.t1;Parent=MS.gene98597 |
| chr4.2 | exon | 49897542 | 49897579 | 49897542 | ID=MS.gene98597.t1.exon1;Parent=MS.gene98597.t1 |
| chr4.2 | CDS | 49897542 | 49897579 | 49897542 | ID=cds.MS.gene98597.t1;Parent=MS.gene98597.t1 |
| chr4.2 | exon | 49897802 | 49898579 | 49897802 | ID=MS.gene98597.t1.exon2;Parent=MS.gene98597.t1 |
| chr4.2 | CDS | 49897802 | 49898579 | 49897802 | ID=cds.MS.gene98597.t1;Parent=MS.gene98597.t1 |
| Gene Sequence |
| Protein sequence |
