Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99406.t1 | XP_003617067.1 | 99.4 | 532 | 3 | 0 | 1 | 532 | 1 | 532 | 2.90E-295 | 1023.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99406.t1 | Q9SF16 | 93.0 | 532 | 37 | 0 | 1 | 532 | 1 | 532 | 9.2e-282 | 970.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99406.t1 | G7K2W1 | 99.4 | 532 | 3 | 0 | 1 | 532 | 1 | 532 | 2.1e-295 | 1023.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057052 | MS.gene99406 | 0.852564 | 4.25E-61 | -1.69E-46 |
| MS.gene060574 | MS.gene99406 | 0.811681 | 6.20E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99406.t1 | MTR_5g087560 | 99.465 | 561 | 3 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1135 |
| MS.gene99406.t1 | MTR_8g088270 | 37.665 | 531 | 305 | 8 | 21 | 532 | 17 | 540 | 1.72e-109 | 338 |
| MS.gene99406.t1 | MTR_7g067470 | 36.450 | 524 | 312 | 8 | 11 | 526 | 6 | 516 | 6.42e-100 | 313 |
| MS.gene99406.t1 | MTR_7g113470 | 36.031 | 519 | 321 | 6 | 11 | 526 | 6 | 516 | 3.19e-99 | 311 |
| MS.gene99406.t1 | MTR_2g013540 | 32.163 | 541 | 350 | 5 | 5 | 536 | 1 | 533 | 2.87e-94 | 299 |
| MS.gene99406.t1 | MTR_3g086330 | 31.569 | 529 | 346 | 8 | 6 | 526 | 10 | 530 | 7.77e-79 | 258 |
| MS.gene99406.t1 | MTR_3g109925 | 32.877 | 511 | 323 | 8 | 27 | 526 | 28 | 529 | 7.06e-77 | 253 |
| MS.gene99406.t1 | MTR_1g030650 | 27.099 | 524 | 363 | 10 | 11 | 526 | 11 | 523 | 3.08e-61 | 211 |
| MS.gene99406.t1 | MTR_3g109925 | 30.237 | 506 | 286 | 8 | 27 | 526 | 28 | 472 | 4.34e-61 | 209 |
| MS.gene99406.t1 | MTR_6g032870 | 27.099 | 524 | 363 | 10 | 11 | 526 | 8 | 520 | 4.12e-59 | 206 |
| MS.gene99406.t1 | MTR_2g013540 | 29.563 | 389 | 257 | 5 | 157 | 536 | 4 | 384 | 1.17e-51 | 182 |
| MS.gene99406.t1 | MTR_7g406870 | 26.204 | 519 | 356 | 7 | 25 | 527 | 19 | 526 | 1.30e-50 | 182 |
| MS.gene99406.t1 | MTR_7g406870 | 24.679 | 389 | 273 | 5 | 152 | 527 | 33 | 414 | 7.47e-29 | 119 |
| MS.gene99406.t1 | MTR_8g105970 | 27.628 | 333 | 183 | 11 | 183 | 494 | 60 | 355 | 5.14e-24 | 103 |
| MS.gene99406.t1 | MTR_8g010750 | 26.842 | 380 | 193 | 11 | 22 | 357 | 26 | 364 | 2.25e-20 | 94.7 |
| MS.gene99406.t1 | MTR_1g017390 | 23.427 | 572 | 328 | 22 | 30 | 536 | 64 | 590 | 4.80e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99406.t1 | AT3G11830 | 92.924 | 537 | 38 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1006 |
| MS.gene99406.t1 | AT3G11830 | 92.551 | 537 | 38 | 1 | 1 | 537 | 1 | 535 | 0.0 | 996 |
| MS.gene99406.t1 | AT3G20050 | 36.364 | 539 | 318 | 7 | 17 | 537 | 13 | 544 | 1.02e-109 | 338 |
| MS.gene99406.t1 | AT5G20890 | 36.154 | 520 | 319 | 7 | 11 | 526 | 6 | 516 | 4.62e-96 | 303 |
| MS.gene99406.t1 | AT5G26360 | 31.978 | 541 | 351 | 5 | 5 | 536 | 1 | 533 | 2.54e-89 | 286 |
| MS.gene99406.t1 | AT3G18190 | 34.247 | 511 | 316 | 8 | 27 | 526 | 32 | 533 | 6.74e-85 | 274 |
| MS.gene99406.t1 | AT1G24510 | 30.132 | 531 | 355 | 8 | 6 | 528 | 10 | 532 | 8.96e-76 | 250 |
| MS.gene99406.t1 | AT1G24510 | 28.992 | 476 | 323 | 7 | 60 | 528 | 12 | 479 | 3.27e-63 | 215 |
| MS.gene99406.t1 | AT3G03960 | 27.307 | 531 | 367 | 9 | 5 | 526 | 6 | 526 | 1.72e-62 | 215 |
| MS.gene99406.t1 | AT1G24510 | 28.233 | 464 | 318 | 7 | 72 | 528 | 1 | 456 | 9.34e-58 | 200 |
| MS.gene99406.t1 | AT3G02530 | 25.586 | 512 | 360 | 6 | 29 | 527 | 23 | 526 | 1.81e-49 | 179 |
| MS.gene99406.t1 | AT5G16070 | 25.636 | 511 | 360 | 6 | 29 | 527 | 23 | 525 | 1.86e-48 | 176 |
| MS.gene99406.t1 | AT3G13470 | 23.199 | 569 | 336 | 20 | 35 | 549 | 74 | 595 | 9.04e-13 | 71.2 |
| MS.gene99406.t1 | AT1G55490 | 22.968 | 566 | 328 | 21 | 35 | 536 | 78 | 599 | 1.67e-12 | 70.5 |
| MS.gene99406.t1 | AT1G55490 | 22.968 | 566 | 328 | 21 | 35 | 536 | 78 | 599 | 1.67e-12 | 70.5 |
| MS.gene99406.t1 | AT1G55490 | 22.968 | 566 | 328 | 21 | 35 | 536 | 78 | 599 | 1.67e-12 | 70.5 |
| MS.gene99406.t1 | AT1G55490 | 22.968 | 566 | 328 | 21 | 35 | 536 | 78 | 599 | 1.67e-12 | 70.5 |
| MS.gene99406.t1 | AT1G55490 | 22.968 | 566 | 328 | 21 | 35 | 536 | 78 | 599 | 1.67e-12 | 70.5 |
Find 132 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTTCTTCAAAACTTAT+AGG | 0.194659 | 5.1:+69013198 | MS.gene99406:CDS |
| ATTCATTTGCCAACTTTGTC+TGG | 0.204932 | 5.1:+69018367 | MS.gene99406:CDS |
| CTTATTTGCTTGAAGGTTCT+TGG | 0.219293 | 5.1:+69015932 | MS.gene99406:intron |
| GAATATTATTTATGACAAAT+TGG | 0.227744 | 5.1:+69015506 | MS.gene99406:CDS |
| AAAATTTAATACGGAGTTAT+AGG | 0.246244 | 5.1:+69012965 | MS.gene99406:CDS |
| AAAGGAATTCTTTGCATCTA+TGG | 0.289996 | 5.1:+69013227 | MS.gene99406:CDS |
| GAAATATTGGCACCTTATTT+CGG | 0.304281 | 5.1:-69015343 | None:intergenic |
| AAAAGAGTTGCTGCTGCAAC+TGG | 0.305439 | 5.1:+69015791 | MS.gene99406:CDS |
| GAAGGTGAGGGTGCTCCATT+TGG | 0.310401 | 5.1:+69018315 | MS.gene99406:intron |
| CAGAAACACGCGCTTCCTTC+TGG | 0.317305 | 5.1:+69017302 | MS.gene99406:CDS |
| GTTCTCTCACGCCTGGCTAT+TGG | 0.351309 | 5.1:+69015558 | MS.gene99406:CDS |
| AGAAAGAAAATGCCGAAATA+AGG | 0.352104 | 5.1:+69015331 | MS.gene99406:CDS |
| AAGGTGAGGGTGCTCCATTT+GGG | 0.365916 | 5.1:+69018316 | MS.gene99406:intron |
| TGCTACAGAGGCAGCTTGCC+TGG | 0.375773 | 5.1:+69018509 | MS.gene99406:CDS |
| ATGCAATCATGATTGTTAGA+AGG | 0.376275 | 5.1:+69016204 | MS.gene99406:CDS |
| GAGCTAGCTGTTAGCATTGA+GGG | 0.383111 | 5.1:+69013126 | MS.gene99406:CDS |
| CAGCATTGTCACATAATTGC+CGG | 0.405508 | 5.1:-69017244 | None:intergenic |
| TTGTGCGTGCATGCTGCCTT+AGG | 0.406875 | 5.1:-69016383 | None:intergenic |
| CAGCATGCACGCACAATAGC+TGG | 0.407586 | 5.1:+69016390 | MS.gene99406:CDS |
| AAACTCATCCACGATGATAA+AGG | 0.411477 | 5.1:+69011616 | MS.gene99406:CDS |
| TTCACTCTCAAAATTTAATA+CGG | 0.412053 | 5.1:+69012956 | MS.gene99406:CDS |
| TTGCAATTGGGACTGATGAT+AGG | 0.412581 | 5.1:+69013265 | MS.gene99406:CDS |
| GAAGAACTATGGTGGCTGTT+TGG | 0.419517 | 5.1:-69016027 | None:intergenic |
| AGCAATATCAACTAAGATCT+TGG | 0.420275 | 5.1:-69011704 | None:intergenic |
| GGAGGCAGAGGTCGCGGAGG+TGG | 0.424216 | 5.1:+69019844 | MS.gene99406:CDS |
| GAAGAGAAGAAAAGTTTGCT+TGG | 0.426567 | 5.1:+69013159 | MS.gene99406:CDS |
| GGCTCCACCACGAAGAACTA+TGG | 0.429012 | 5.1:-69016038 | None:intergenic |
| GTGGACGCTGTAATTGCAAT+TGG | 0.430540 | 5.1:+69013252 | MS.gene99406:CDS |
| ATCTTCAATGGATGTCCATC+TGG | 0.432018 | 5.1:+69016004 | MS.gene99406:CDS |
| ATATGAAAATGTCTTCTTGA+AGG | 0.433340 | 5.1:-69015229 | None:intergenic |
| TTCATTTGCCAACTTTGTCT+GGG | 0.434603 | 5.1:+69018368 | MS.gene99406:CDS |
| GATGATAGGTTAAACATGAT+TGG | 0.435001 | 5.1:+69013279 | MS.gene99406:CDS |
| TCTTCGTGGTGGAGCCGATC+AGG | 0.435496 | 5.1:+69016045 | MS.gene99406:CDS |
| AGCCTCTCCTTGTGCACTCT+CGG | 0.442120 | 5.1:-69019806 | None:intergenic |
| ACGCCTGGCTATTGGTGATC+TGG | 0.446104 | 5.1:+69015566 | MS.gene99406:CDS |
| AGTAGCGCCGTCGTTAGAAA+TGG | 0.453461 | 5.1:-69011647 | None:intergenic |
| ATTCTTTGCATCTATGGTTG+TGG | 0.462064 | 5.1:+69013233 | MS.gene99406:CDS |
| GGTTTCCGTGGCCGTGGACG+AGG | 0.463717 | 5.1:+69019865 | MS.gene99406:CDS |
| CACCCTAGGTCCTCGCGGTA+TGG | 0.466201 | 5.1:+69011591 | MS.gene99406:CDS |
| CGTGACTCATTTCTTGTCAA+TGG | 0.467306 | 5.1:+69015201 | MS.gene99406:CDS |
| TTTGGATCGAGAAACTTCTT+GGG | 0.472807 | 5.1:-69015270 | None:intergenic |
| ATCAACTAAGATCTTGGCAG+CGG | 0.472906 | 5.1:-69011698 | None:intergenic |
| ACTATTACTTAATGTTGAGT+TGG | 0.473212 | 5.1:+69015296 | MS.gene99406:CDS |
| GAGAGATTCAACATCTTCAA+TGG | 0.474859 | 5.1:+69015992 | MS.gene99406:CDS |
| GCAAAGCCTTTCATTGAAGA+TGG | 0.481903 | 5.1:+69012931 | MS.gene99406:CDS |
| GAACAACTTTGGCACCACTT+TGG | 0.482261 | 5.1:-69015539 | None:intergenic |
| AAAACTTATAGGCGGAGAAA+AGG | 0.483886 | 5.1:+69013209 | MS.gene99406:CDS |
| GTGGCTATGTCGACCCCAAA+TGG | 0.487755 | 5.1:-69018330 | None:intergenic |
| TTCAACCATGTCTTCTATGC+TGG | 0.488113 | 5.1:+69011362 | None:intergenic |
| AATCAATTGTTGATGCAGAA+TGG | 0.489441 | 5.1:+69015484 | MS.gene99406:CDS |
| TGGAAATAAGCCGGTACCTA+AGG | 0.491090 | 5.1:+69016367 | MS.gene99406:CDS |
| AGCATTGTCACATAATTGCC+GGG | 0.495335 | 5.1:-69017243 | None:intergenic |
| TGTGTTACCTTTACAACTGC+AGG | 0.496824 | 5.1:-69018393 | None:intergenic |
| AAGAATTCAACTGTAGTTGC+TGG | 0.502547 | 5.1:+69016233 | MS.gene99406:CDS |
| CTGGGAGCCTGCAGTTGTAA+AGG | 0.504005 | 5.1:+69018386 | MS.gene99406:CDS |
| TCCGCGACCTCTGCCTCCCA+TGG | 0.505514 | 5.1:-69019839 | None:intergenic |
| AGAGGCTGCTGCAAGTGCCA+TGG | 0.507829 | 5.1:+69019822 | MS.gene99406:CDS |
| GTCCATACCGCGAGGACCTA+GGG | 0.509242 | 5.1:-69011593 | None:intergenic |
| GAGGCTGCTGCAAGTGCCAT+GGG | 0.510487 | 5.1:+69019823 | MS.gene99406:CDS |
| GCCATGGGAGGCAGAGGTCG+CGG | 0.511189 | 5.1:+69019838 | MS.gene99406:CDS |
| TGTCCATACCGCGAGGACCT+AGG | 0.512184 | 5.1:-69011594 | None:intergenic |
| CTCCTATGCAAAAGCTCTTG+AGG | 0.514576 | 5.1:+69016434 | MS.gene99406:CDS |
| GCAAGTGCCATGGGAGGCAG+AGG | 0.514740 | 5.1:+69019832 | MS.gene99406:CDS |
| CAAAGTTGTTCTCTCACGCC+TGG | 0.517173 | 5.1:+69015551 | MS.gene99406:CDS |
| TGGACGCTGTAATTGCAATT+GGG | 0.522784 | 5.1:+69013253 | MS.gene99406:CDS |
| GTGCATGCTGCCTTAGGTAC+CGG | 0.523446 | 5.1:-69016377 | None:intergenic |
| TGCTATAAATGCTGCTACAG+AGG | 0.524498 | 5.1:+69018497 | MS.gene99406:CDS |
| TGCAATCATGATTGTTAGAA+GGG | 0.525847 | 5.1:+69016205 | MS.gene99406:CDS |
| ATGGTGGCTGTTTGGCCAGA+TGG | 0.526129 | 5.1:-69016019 | None:intergenic |
| TTATAGGAATGCATGCTCCT+TGG | 0.526307 | 5.1:+69012981 | MS.gene99406:CDS |
| CGGCAATTATGTGACAATGC+TGG | 0.526950 | 5.1:+69017245 | MS.gene99406:CDS |
| AAACATGATTGGAATAAAGA+AGG | 0.527009 | 5.1:+69013290 | MS.gene99406:CDS |
| AAGAGTTGCTGCTGCAACTG+GGG | 0.532157 | 5.1:+69015793 | MS.gene99406:CDS |
| TTGCCAGATCACCAATAGCC+AGG | 0.540140 | 5.1:-69015569 | None:intergenic |
| GGAGGTGGTTTCCGTGGCCG+TGG | 0.540350 | 5.1:+69019859 | MS.gene99406:CDS |
| TGTTATTGCAGGTTATTCCC+CGG | 0.542735 | 5.1:+69017225 | MS.gene99406:intron |
| AAAGAGTTGCTGCTGCAACT+GGG | 0.544621 | 5.1:+69015792 | MS.gene99406:CDS |
| TTGATGTTGCTTACGAGTTG+AGG | 0.547025 | 5.1:-69011535 | None:intergenic |
| CAGGCGTGAGAGAACAACTT+TGG | 0.550761 | 5.1:-69015550 | None:intergenic |
| GCATTCCTCGTCCACGGCCA+CGG | 0.551786 | 5.1:-69019870 | None:intergenic |
| AGAGCTAGCTGTTAGCATTG+AGG | 0.556400 | 5.1:+69013125 | MS.gene99406:CDS |
| GGTTCGAACGACGTCGGCGA+CGG | 0.561806 | 5.1:-69011569 | None:intergenic |
| TGCAGGCTCCCAGACAAAGT+TGG | 0.565410 | 5.1:-69018376 | None:intergenic |
| TGTCAATAACATTATTGATG+AGG | 0.570369 | 5.1:+69015832 | MS.gene99406:CDS |
| AGCACAGAAAATGTCTCTAT+CGG | 0.576037 | 5.1:-69015744 | None:intergenic |
| TCAACTAAGATCTTGGCAGC+GGG | 0.578759 | 5.1:-69011697 | None:intergenic |
| GTTGTCAGATGGAAATAAGC+CGG | 0.584185 | 5.1:+69016358 | MS.gene99406:intron |
| GACGTCGTTCGAACCACCCT+AGG | 0.584290 | 5.1:+69011577 | MS.gene99406:CDS |
| TATTGGTGATCTGGCAACAC+AGG | 0.584988 | 5.1:+69015575 | MS.gene99406:CDS |
| CAGATCATACTACTGAAAGA+AGG | 0.586463 | 5.1:+69011490 | MS.gene99406:CDS |
| TCAACTGTAGTTGCTGGTGG+AGG | 0.588207 | 5.1:+69016239 | MS.gene99406:CDS |
| TCTTTCAGTAGTATGATCTG+TGG | 0.588647 | 5.1:-69011487 | None:intergenic |
| ACAGCCACCATAGTTCTTCG+TGG | 0.595963 | 5.1:+69016031 | MS.gene99406:CDS |
| TGAACACCATCTTCAATGAA+AGG | 0.598288 | 5.1:-69012937 | None:intergenic |
| TTTGGGGTCGACATAGCCAC+TGG | 0.598540 | 5.1:+69018333 | MS.gene99406:CDS |
| AGGTGAGGGTGCTCCATTTG+GGG | 0.609656 | 5.1:+69018317 | MS.gene99406:intron |
| GTCCGAGAGTGCACAAGGAG+AGG | 0.612084 | 5.1:+69019804 | MS.gene99406:intron |
| GGTCGCGGAGGTGGTTTCCG+TGG | 0.612096 | 5.1:+69019853 | MS.gene99406:CDS |
| AATTCAACTGTAGTTGCTGG+TGG | 0.612307 | 5.1:+69016236 | MS.gene99406:CDS |
| ATGTAGTCCGAGAGTGCACA+AGG | 0.618575 | 5.1:+69019799 | MS.gene99406:intron |
| CTTTCTTCAAAACTTATAGG+CGG | 0.620972 | 5.1:+69013201 | MS.gene99406:CDS |
| TTTCATCCACACTTAAGACC+AGG | 0.622642 | 5.1:-69018527 | None:intergenic |
| AGCTTGCCTGGTCTTAAGTG+TGG | 0.623799 | 5.1:+69018521 | MS.gene99406:CDS |
| ACAATTGATTGATACTGCGA+AGG | 0.626095 | 5.1:-69015471 | None:intergenic |
| ATTTATATAGGCGATTGAGA+AGG | 0.626592 | 5.1:+69013098 | MS.gene99406:intron |
| GAAGGTACAGACACATCGCA+AGG | 0.628380 | 5.1:+69011508 | MS.gene99406:CDS |
| ATCTACGCATTCCTCGTCCA+CGG | 0.629446 | 5.1:-69019876 | None:intergenic |
| ATGGGAGGCAGAGGTCGCGG+AGG | 0.629988 | 5.1:+69019841 | MS.gene99406:CDS |
| GCTGCTGCAAGTGCCATGGG+AGG | 0.631802 | 5.1:+69019826 | MS.gene99406:CDS |
| AGAGTTGCTGCTGCAACTGG+GGG | 0.633739 | 5.1:+69015794 | MS.gene99406:CDS |
| CCACATGTAACAGACCTGAT+CGG | 0.638379 | 5.1:-69016059 | None:intergenic |
| GTGACTGTGAAGGTTGGCGA+TGG | 0.638685 | 5.1:+69012865 | MS.gene99406:intron |
| TGCTAAGTCTCAAGACTCTG+AGG | 0.641653 | 5.1:+69011723 | MS.gene99406:CDS |
| GAGTCACGCATGTTACCACC+AGG | 0.652404 | 5.1:-69015186 | None:intergenic |
| GCTTACCAGCATAGAAGACA+TGG | 0.652653 | 5.1:-69011367 | None:intergenic |
| TTTCTTCTACAGGTTCCTGG+TGG | 0.652923 | 5.1:+69015171 | MS.gene99406:intron |
| TGAATCAGCAATTCCACCAG+TGG | 0.658303 | 5.1:-69018349 | None:intergenic |
| GCCACCATAGTTCTTCGTGG+TGG | 0.660027 | 5.1:+69016034 | MS.gene99406:CDS |
| GGGGTCGACATAGCCACTGG+TGG | 0.660282 | 5.1:+69018336 | MS.gene99406:CDS |
| TGCAAGCAATACCACAGTGG+TGG | 0.660823 | 5.1:-69012890 | None:intergenic |
| TCTGTCACCATTTCTAACGA+CGG | 0.662631 | 5.1:+69011640 | MS.gene99406:CDS |
| AAGGTACAGACACATCGCAA+GGG | 0.678150 | 5.1:+69011509 | MS.gene99406:CDS |
| GCATTGTCACATAATTGCCG+GGG | 0.690605 | 5.1:-69017242 | None:intergenic |
| TCCACCACGAAGAACTATGG+TGG | 0.692737 | 5.1:-69016035 | None:intergenic |
| TGACAGAACCTTTATCATCG+TGG | 0.697727 | 5.1:-69011624 | None:intergenic |
| CATACCGCGAGGACCTAGGG+TGG | 0.704746 | 5.1:-69011590 | None:intergenic |
| TAGGGTGGTTCGAACGACGT+CGG | 0.704807 | 5.1:-69011575 | None:intergenic |
| TTGGATAAATGTGTCCAAAG+TGG | 0.710450 | 5.1:+69015525 | MS.gene99406:CDS |
| CGAACCACCCTAGGTCCTCG+CGG | 0.746042 | 5.1:+69011586 | MS.gene99406:CDS |
| ATGAGTTTGTCCATACCGCG+AGG | 0.761718 | 5.1:-69011601 | None:intergenic |
| AGCTGCAAGCAATACCACAG+TGG | 0.761934 | 5.1:-69012893 | None:intergenic |
| TGGCGATGGAACCACCACTG+TGG | 0.777137 | 5.1:+69012879 | MS.gene99406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 69011369 | 69019900 | 69011369 | ID=MS.gene99406 |
| chr5.1 | mRNA | 69011369 | 69019900 | 69011369 | ID=MS.gene99406.t1;Parent=MS.gene99406 |
| chr5.1 | exon | 69011369 | 69011383 | 69011369 | ID=MS.gene99406.t1.exon1;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69011369 | 69011383 | 69011369 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69011484 | 69011744 | 69011484 | ID=MS.gene99406.t1.exon2;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69011484 | 69011744 | 69011484 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69012877 | 69013002 | 69012877 | ID=MS.gene99406.t1.exon3;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69012877 | 69013002 | 69012877 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69013108 | 69013311 | 69013108 | ID=MS.gene99406.t1.exon4;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69013108 | 69013311 | 69013108 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69015183 | 69015352 | 69015183 | ID=MS.gene99406.t1.exon5;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69015183 | 69015352 | 69015183 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69015461 | 69015596 | 69015461 | ID=MS.gene99406.t1.exon6;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69015461 | 69015596 | 69015461 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69015737 | 69015853 | 69015737 | ID=MS.gene99406.t1.exon7;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69015737 | 69015853 | 69015737 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69015947 | 69016066 | 69015947 | ID=MS.gene99406.t1.exon8;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69015947 | 69016066 | 69015947 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69016173 | 69016271 | 69016173 | ID=MS.gene99406.t1.exon9;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69016173 | 69016271 | 69016173 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69016366 | 69016455 | 69016366 | ID=MS.gene99406.t1.exon10;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69016366 | 69016455 | 69016366 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69017236 | 69017323 | 69017236 | ID=MS.gene99406.t1.exon11;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69017236 | 69017323 | 69017236 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69018319 | 69018407 | 69018319 | ID=MS.gene99406.t1.exon12;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69018319 | 69018407 | 69018319 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69018492 | 69018566 | 69018492 | ID=MS.gene99406.t1.exon13;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69018492 | 69018566 | 69018492 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| chr5.1 | exon | 69019805 | 69019900 | 69019805 | ID=MS.gene99406.t1.exon14;Parent=MS.gene99406.t1 |
| chr5.1 | CDS | 69019805 | 69019900 | 69019805 | ID=cds.MS.gene99406.t1;Parent=MS.gene99406.t1 |
| Gene Sequence |
| Protein sequence |