Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62993.t1 | XP_013466502.1 | 100 | 543 | 0 | 0 | 407 | 949 | 1 | 543 | 1.40E-302 | 1048.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62993.t1 | Q94K05 | 81.8 | 549 | 94 | 2 | 407 | 949 | 1 | 549 | 2.3e-256 | 886.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62993.t1 | A0A072VGH7 | 100.0 | 543 | 0 | 0 | 407 | 949 | 1 | 543 | 1.0e-302 | 1048.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62993.t1 | MTR_1g030650 | 100.000 | 543 | 0 | 0 | 407 | 949 | 1 | 543 | 0.0 | 1110 |
MS.gene62993.t1 | MTR_6g032870 | 91.682 | 541 | 43 | 2 | 410 | 949 | 1 | 540 | 0.0 | 1007 |
MS.gene62993.t1 | MTR_1g030640 | 96.474 | 397 | 13 | 1 | 1 | 397 | 1 | 396 | 0.0 | 798 |
MS.gene62993.t1 | MTR_2g013540 | 29.063 | 523 | 345 | 12 | 435 | 939 | 24 | 538 | 8.24e-65 | 228 |
MS.gene62993.t1 | MTR_8g088270 | 30.174 | 517 | 335 | 9 | 434 | 929 | 23 | 534 | 5.42e-63 | 223 |
MS.gene62993.t1 | MTR_3g109925 | 27.626 | 514 | 358 | 5 | 429 | 932 | 23 | 532 | 7.43e-63 | 223 |
MS.gene62993.t1 | MTR_5g087560 | 27.099 | 524 | 363 | 10 | 417 | 929 | 11 | 526 | 3.32e-58 | 210 |
MS.gene62993.t1 | MTR_3g086330 | 26.744 | 516 | 370 | 6 | 419 | 929 | 18 | 530 | 6.78e-52 | 191 |
MS.gene62993.t1 | MTR_3g109925 | 26.326 | 509 | 314 | 5 | 429 | 932 | 23 | 475 | 1.00e-49 | 183 |
MS.gene62993.t1 | MTR_7g067470 | 28.257 | 499 | 343 | 8 | 442 | 933 | 30 | 520 | 4.47e-49 | 183 |
MS.gene62993.t1 | MTR_7g113470 | 28.257 | 499 | 343 | 9 | 442 | 933 | 30 | 520 | 8.86e-49 | 182 |
MS.gene62993.t1 | MTR_7g406870 | 24.517 | 518 | 366 | 10 | 431 | 931 | 18 | 527 | 1.19e-37 | 149 |
MS.gene62993.t1 | MTR_2g013540 | 26.478 | 389 | 264 | 11 | 569 | 939 | 5 | 389 | 1.80e-35 | 140 |
MS.gene62993.t1 | MTR_8g105970 | 25.974 | 308 | 188 | 6 | 597 | 891 | 69 | 349 | 1.88e-23 | 103 |
MS.gene62993.t1 | MTR_7g406870 | 22.695 | 423 | 302 | 10 | 526 | 931 | 1 | 415 | 2.27e-20 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62993.t1 | AT3G03960 | 83.333 | 534 | 86 | 1 | 407 | 937 | 1 | 534 | 0.0 | 935 |
MS.gene62993.t1 | AT3G18190 | 27.953 | 508 | 352 | 5 | 435 | 932 | 33 | 536 | 7.71e-66 | 231 |
MS.gene62993.t1 | AT3G20050 | 29.787 | 517 | 337 | 9 | 434 | 929 | 23 | 534 | 6.03e-63 | 223 |
MS.gene62993.t1 | AT5G26360 | 28.681 | 523 | 347 | 12 | 435 | 939 | 24 | 538 | 7.24e-61 | 218 |
MS.gene62993.t1 | AT3G11830 | 27.841 | 528 | 354 | 12 | 417 | 929 | 11 | 526 | 1.07e-58 | 211 |
MS.gene62993.t1 | AT3G11830 | 27.841 | 528 | 352 | 13 | 417 | 929 | 11 | 524 | 7.93e-57 | 206 |
MS.gene62993.t1 | AT1G24510 | 27.017 | 533 | 376 | 8 | 404 | 929 | 4 | 530 | 1.72e-52 | 193 |
MS.gene62993.t1 | AT5G20890 | 27.364 | 497 | 350 | 7 | 442 | 933 | 30 | 520 | 4.87e-48 | 180 |
MS.gene62993.t1 | AT1G24510 | 25.696 | 467 | 340 | 5 | 468 | 929 | 13 | 477 | 1.37e-44 | 169 |
MS.gene62993.t1 | AT3G02530 | 25.681 | 514 | 355 | 11 | 436 | 931 | 23 | 527 | 6.93e-41 | 159 |
MS.gene62993.t1 | AT1G24510 | 25.219 | 456 | 334 | 5 | 479 | 929 | 1 | 454 | 7.85e-41 | 157 |
MS.gene62993.t1 | AT5G16070 | 25.391 | 512 | 358 | 10 | 436 | 931 | 23 | 526 | 8.64e-40 | 155 |
MS.gene62993.t1 | AT4G08640 | 34.969 | 163 | 77 | 3 | 601 | 762 | 1 | 135 | 9.78e-21 | 90.9 |
Find 245 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATCCTGCTGCTAAGATTT+TGG | 0.176276 | 1.3:+16498713 | MS.gene62993:CDS |
ATTTGAGTCATACCCTATTT+TGG | 0.182730 | 1.3:-16493457 | None:intergenic |
AGCTGCATGTCTCAAATTAT+TGG | 0.208256 | 1.3:+16496066 | MS.gene62993:intron |
TTATTCCTTCTAAGTGAAAA+TGG | 0.212698 | 1.3:-16496131 | None:intergenic |
AACCTCCTCGGCTGCTGATT+TGG | 0.248392 | 1.3:-16494450 | None:intergenic |
GCATTCTCCGCCAATGTTCT+AGG | 0.257968 | 1.3:-16504750 | None:intergenic |
AATTCATGCTTGTAGGCTTA+TGG | 0.265137 | 1.3:+16503170 | MS.gene62993:intron |
TACAGCCTGTTCACCAAAAT+AGG | 0.266802 | 1.3:+16493444 | MS.gene62993:CDS |
ATTTCAGACTATGGAAATAT+TGG | 0.272556 | 1.3:+16499751 | MS.gene62993:intron |
ACCTCCTCGGCTGCTGATTT+GGG | 0.286834 | 1.3:-16494449 | None:intergenic |
CACTAAAGTTGGCATTGATT+TGG | 0.293356 | 1.3:+16504830 | MS.gene62993:CDS |
TTGTCCACATTAAAGTTTAC+AGG | 0.307478 | 1.3:-16500025 | None:intergenic |
TCAAATTATTGGGAAGCTAT+TGG | 0.309504 | 1.3:+16496077 | MS.gene62993:CDS |
CTTCTCTTCACAATCTCTTA+AGG | 0.318402 | 1.3:+16491823 | MS.gene62993:CDS |
GCGTAATAGTACAGTTGTTC+GGG | 0.323609 | 1.3:+16500081 | MS.gene62993:CDS |
GGAAGAAAATGAAACTGTTC+TGG | 0.329882 | 1.3:+16495382 | MS.gene62993:CDS |
TAAGATGGTTATAAATCATT+TGG | 0.331551 | 1.3:+16498635 | MS.gene62993:CDS |
ATGGTGCTGAAGAGCTTATT+AGG | 0.332856 | 1.3:+16498814 | MS.gene62993:CDS |
TTTGCCGGCGAGTTACTTCA+TGG | 0.340967 | 1.3:+16498795 | MS.gene62993:CDS |
TTGTTGTGGTTGTTGAAGAA+TGG | 0.349548 | 1.3:-16491782 | None:intergenic |
GCCGCTATTGGTGGGTTTGC+TGG | 0.357775 | 1.3:+16491974 | MS.gene62993:CDS |
CACTGCAGATAAACTTGGTT+TGG | 0.358035 | 1.3:+16495409 | MS.gene62993:CDS |
TGAGGAAGGTTCCGACAATA+TGG | 0.361565 | 1.3:+16499784 | MS.gene62993:CDS |
GTTCGTGTCGCAAAGCTCTT+AGG | 0.365160 | 1.3:+16500049 | MS.gene62993:CDS |
TCTGTTTCAGTTGAGGAAAT+TGG | 0.367632 | 1.3:+16503385 | MS.gene62993:CDS |
GAAGAGAGAGCACGAGCAAC+AGG | 0.369231 | 1.3:-16492007 | None:intergenic |
AGAGATAGGCTCAAGGGAAT+TGG | 0.369687 | 1.3:-16494422 | None:intergenic |
GACCTTCTTTCAGCATAGAT+TGG | 0.374912 | 1.3:-16497771 | None:intergenic |
TCAACATATCCAAGATCATC+TGG | 0.376981 | 1.3:-16503361 | None:intergenic |
AAAGCTCAACAAGAGGAAAT+TGG | 0.382605 | 1.3:+16498747 | MS.gene62993:CDS |
CAGTAAAGCTCCACAATACT+TGG | 0.386440 | 1.3:+16495074 | MS.gene62993:CDS |
GTAGCAACTGTTGTCTTAAG+AGG | 0.386858 | 1.3:+16503577 | MS.gene62993:CDS |
CTGATTTGGGACTTAGAGAT+AGG | 0.387375 | 1.3:-16494436 | None:intergenic |
TTAACGCAGCAATGCTATAT+TGG | 0.388018 | 1.3:+16493354 | MS.gene62993:CDS |
TGCGTAATAGTACAGTTGTT+CGG | 0.388090 | 1.3:+16500080 | MS.gene62993:CDS |
ATCAAGGCTGTAGTTGATTC+TGG | 0.389293 | 1.3:+16502940 | MS.gene62993:CDS |
ACATCATCAGTATCATCATC+TGG | 0.389499 | 1.3:-16494148 | None:intergenic |
GTAGAGAAAGAAGGGGTTAT+CGG | 0.392310 | 1.3:-16491758 | None:intergenic |
GTCCCCTCCACAAGCATCCC+TGG | 0.394937 | 1.3:-16495163 | None:intergenic |
ATGTCACAACCACACATGTT+TGG | 0.396159 | 1.3:+16504871 | MS.gene62993:CDS |
AGAACATTGGCGGAGAATGC+TGG | 0.398518 | 1.3:+16504753 | MS.gene62993:CDS |
AATGGAAAAGGGTTGCATAT+TGG | 0.400790 | 1.3:+16495113 | MS.gene62993:CDS |
TCTCATACATTCTGCTGAAC+AGG | 0.403846 | 1.3:+16501769 | MS.gene62993:CDS |
ACAGCTCTAAGTAAAGAATC+AGG | 0.405933 | 1.3:-16494070 | None:intergenic |
CCTAATGCATTATATGTTGA+AGG | 0.407076 | 1.3:+16493383 | MS.gene62993:CDS |
TGTCACAACCACACATGTTT+GGG | 0.407686 | 1.3:+16504872 | MS.gene62993:CDS |
GCAGGTTGCTCTCTCTTGCC+AGG | 0.408481 | 1.3:-16506503 | None:intergenic |
TGTTGTGGTTGTTGAAGAAT+GGG | 0.412053 | 1.3:-16491781 | None:intergenic |
GGAACTCCTTCACCACTAGA+TGG | 0.413837 | 1.3:-16494367 | None:intergenic |
AAGTGGATTGATCCTAAAAC+TGG | 0.414539 | 1.3:+16494022 | MS.gene62993:CDS |
TCAGATTATTATGGCGAAAC+CGG | 0.414996 | 1.3:+16506472 | MS.gene62993:intron |
ATGATAGTGCCGACTGGAAC+TGG | 0.418053 | 1.3:+16491950 | MS.gene62993:CDS |
CCTAAAACTGGCAAATCTAC+AGG | 0.418414 | 1.3:+16494034 | MS.gene62993:CDS |
AAGGGAATTGGAGCCATTGC+AGG | 0.420564 | 1.3:-16494410 | None:intergenic |
ACTGGAACTGGAGCCGCTAT+TGG | 0.423707 | 1.3:+16491962 | MS.gene62993:CDS |
CGACCAAACCCAGATGATCT+TGG | 0.424847 | 1.3:+16503352 | MS.gene62993:CDS |
CTGTGCAGACCTTAGTGAAT+AGG | 0.425303 | 1.3:+16494089 | MS.gene62993:CDS |
GCACTCTGAATCAATGGAAA+AGG | 0.426223 | 1.3:+16495101 | MS.gene62993:CDS |
ATGCTGCATGCACTGTGCTA+CGG | 0.426838 | 1.3:+16505202 | MS.gene62993:CDS |
GGAATAAAATTCGTAACATT+GGG | 0.428084 | 1.3:+16496147 | MS.gene62993:CDS |
CTCCTCCGCTTACAATCACT+TGG | 0.429888 | 1.3:-16502966 | None:intergenic |
GGGCATGTGCACAAGGAATT+CGG | 0.431905 | 1.3:-16494388 | None:intergenic |
GCTGCATGTCTCAAATTATT+GGG | 0.436132 | 1.3:+16496067 | MS.gene62993:intron |
TTCTGCAGCTTCAAGCGTTA+CGG | 0.436928 | 1.3:-16497725 | None:intergenic |
AGGGATGCTTGTGGAGGGGA+CGG | 0.437088 | 1.3:+16495165 | MS.gene62993:CDS |
TGAGATGATTCCTAGAACAT+TGG | 0.438030 | 1.3:+16504740 | MS.gene62993:CDS |
ATTTCAGTTGCTGCAGCTCC+AGG | 0.441650 | 1.3:-16503888 | None:intergenic |
ACCATCACCCGCACTTCCCT+CGG | 0.444815 | 1.3:+16497859 | MS.gene62993:CDS |
AACGCTTGAAGCTGCAGAAA+TGG | 0.445933 | 1.3:+16497729 | MS.gene62993:CDS |
GCGAAACCGGCTGGAGGACC+TGG | 0.446059 | 1.3:+16506485 | MS.gene62993:CDS |
AGGAATAAAATTCGTAACAT+TGG | 0.446897 | 1.3:+16496146 | MS.gene62993:CDS |
TTTGGACGAGGGTGTTTGTA+AGG | 0.446924 | 1.3:+16504848 | MS.gene62993:CDS |
ATTATTATGGCGAAACCGGC+TGG | 0.448121 | 1.3:+16506476 | MS.gene62993:CDS |
CTCTTGCCAGGTCCTCCAGC+CGG | 0.458903 | 1.3:-16506491 | None:intergenic |
GGAAAACTCTTTCACCCTCT+TGG | 0.458929 | 1.3:-16503919 | None:intergenic |
CTGATGATGTTGATGAATAT+CGG | 0.460169 | 1.3:+16494161 | MS.gene62993:CDS |
ACAAACCTTAGCAATGGCTT+TGG | 0.461437 | 1.3:-16498874 | None:intergenic |
ACAGATTTGCAGAAGGGTCA+TGG | 0.468323 | 1.3:+16493417 | MS.gene62993:CDS |
TTCCCAGGGATGCTTGTGGA+GGG | 0.471362 | 1.3:+16495160 | MS.gene62993:CDS |
GTGACAGTATATTCTACAAC+AGG | 0.472274 | 1.3:-16493692 | None:intergenic |
TATCCAAGATCATCTGGGTT+TGG | 0.472971 | 1.3:-16503355 | None:intergenic |
CACTGTGCTACGGGTGGACC+AGG | 0.473173 | 1.3:+16505212 | MS.gene62993:CDS |
AGATAAACTTGGTTTGGAAT+CGG | 0.473366 | 1.3:+16495415 | MS.gene62993:CDS |
TCTTCCACAGTAATGATAAG+TGG | 0.473460 | 1.3:-16495365 | None:intergenic |
GGGATGCTTGTGGAGGGGAC+GGG | 0.474394 | 1.3:+16495166 | MS.gene62993:CDS |
GTAATAGCTGCTCACAAAGC+AGG | 0.476166 | 1.3:+16496101 | MS.gene62993:CDS |
GTGAATGCCATCGCTGTTGT+TGG | 0.477098 | 1.3:+16494118 | MS.gene62993:CDS |
ACAGCCTGTTCACCAAAATA+GGG | 0.477932 | 1.3:+16493445 | MS.gene62993:CDS |
TGGATTCTGTAGTCCTTCCC+AGG | 0.478829 | 1.3:+16495145 | MS.gene62993:CDS |
GTTATTAGGGATGAATAAGA+TGG | 0.479239 | 1.3:+16498620 | MS.gene62993:intron |
AGCATACCCTGTCTCCTTGA+AGG | 0.479850 | 1.3:-16503940 | None:intergenic |
AGAATGGGGTAGAGAAAGAA+GGG | 0.480882 | 1.3:-16491766 | None:intergenic |
GAAGGTCACAAACATCTCTC+TGG | 0.481597 | 1.3:+16497787 | MS.gene62993:CDS |
TGCTGCATGCACTGTGCTAC+GGG | 0.481668 | 1.3:+16505203 | MS.gene62993:CDS |
CCTTCAACATATAATGCATT+AGG | 0.484777 | 1.3:-16493383 | None:intergenic |
GTATTTGAGTGACCATTGGC+AGG | 0.490682 | 1.3:-16496185 | None:intergenic |
AGTTCTTGATGCTGGTATAG+AGG | 0.490977 | 1.3:+16493610 | MS.gene62993:CDS |
TAGGGTTACCATTGGGACCG+AGG | 0.491115 | 1.3:-16497876 | None:intergenic |
TAGTACAGTTGTTCGGGGAA+TGG | 0.492637 | 1.3:+16500087 | MS.gene62993:CDS |
GAGGGAAGCCCTTGCAGCAT+CGG | 0.495642 | 1.3:-16493663 | None:intergenic |
ACCGAGGGAAGTGCGGGTGA+TGG | 0.496519 | 1.3:-16497860 | None:intergenic |
ACATATAATGCATTAGGCAT+TGG | 0.499376 | 1.3:-16493377 | None:intergenic |
GGAACTGGAGCCGCTATTGG+TGG | 0.500113 | 1.3:+16491965 | MS.gene62993:CDS |
ATTGTAAGCGGAGGAGCAGT+AGG | 0.500138 | 1.3:+16502973 | MS.gene62993:CDS |
CACTCTGAATCAATGGAAAA+GGG | 0.500456 | 1.3:+16495102 | MS.gene62993:CDS |
GAGAGAGCAACCTGCTGGCA+TGG | 0.500525 | 1.3:+16506511 | MS.gene62993:CDS |
GGTGATGCACTCTGAATCAA+TGG | 0.500894 | 1.3:+16495095 | MS.gene62993:CDS |
CAGCATAGATTGGATACCAT+AGG | 0.502516 | 1.3:-16497761 | None:intergenic |
AAGAATGGGGTAGAGAAAGA+AGG | 0.502658 | 1.3:-16491767 | None:intergenic |
TGATGAATATCGGCAGGGAT+TGG | 0.504212 | 1.3:+16494171 | MS.gene62993:CDS |
GTTGGAATAGTTCTTGATGC+TGG | 0.507045 | 1.3:+16493602 | MS.gene62993:CDS |
CTTAAGAGATTGTGAAGAGA+AGG | 0.507400 | 1.3:-16491822 | None:intergenic |
TTACATTAGGGTGAGTGATA+AGG | 0.508155 | 1.3:-16492042 | None:intergenic |
TGCTGAAGAGCTTATTAGGA+TGG | 0.509633 | 1.3:+16498818 | MS.gene62993:CDS |
CTTCCCAGGGATGCTTGTGG+AGG | 0.509870 | 1.3:+16495159 | MS.gene62993:CDS |
TAGTATAAAGAGAATGGAAA+AGG | 0.510329 | 1.3:+16500132 | MS.gene62993:CDS |
TTGTGCACATGCCCCTGCAA+TGG | 0.511213 | 1.3:+16494397 | MS.gene62993:CDS |
GCATCAGGAAACACTAAAGT+TGG | 0.518443 | 1.3:+16504819 | MS.gene62993:CDS |
CTATACGCAGAACATGCATC+AGG | 0.519150 | 1.3:+16504804 | MS.gene62993:CDS |
GAACATTGGCGGAGAATGCT+GGG | 0.519436 | 1.3:+16504754 | MS.gene62993:CDS |
GCTGTTGCTAGCAAGCAATT+CGG | 0.521387 | 1.3:+16499848 | MS.gene62993:CDS |
TACGACTGGTTCTGTAGCTA+TGG | 0.521985 | 1.3:+16503236 | MS.gene62993:CDS |
CAGCCTCAACTCCCGCTAGT+AGG | 0.522203 | 1.3:-16494337 | None:intergenic |
TGAAGAGAAGGAACATGAAA+CGG | 0.522274 | 1.3:-16491810 | None:intergenic |
TAGTCTTCGTCCATGCCAGC+AGG | 0.523539 | 1.3:-16506521 | None:intergenic |
CAGATTTGCAGAAGGGTCAT+GGG | 0.525771 | 1.3:+16493418 | MS.gene62993:CDS |
GGCAAGAGAGAGCAACCTGC+TGG | 0.526440 | 1.3:+16506506 | MS.gene62993:CDS |
TACAAGTAGCCGATGCTGCA+AGG | 0.528199 | 1.3:+16493654 | MS.gene62993:CDS |
GAGGGAAGTGCGGGTGATGG+TGG | 0.529652 | 1.3:-16497857 | None:intergenic |
CGGAGGAGCAGTAGGAGAGA+TGG | 0.529826 | 1.3:+16502981 | MS.gene62993:CDS |
GCTGAAGAGCTTATTAGGAT+GGG | 0.532631 | 1.3:+16498819 | MS.gene62993:CDS |
ATTGGGACCGAGGGAAGTGC+GGG | 0.532962 | 1.3:-16497866 | None:intergenic |
TGTTGATTCTGTTTCAGTTG+AGG | 0.534399 | 1.3:+16503378 | MS.gene62993:CDS |
GTCACGGACATCCATATTGT+CGG | 0.535283 | 1.3:-16499795 | None:intergenic |
GATGCTGCAAGGGCTTCCCT+CGG | 0.535323 | 1.3:+16493665 | MS.gene62993:CDS |
AAAACCAAAATCTTAGCAGC+AGG | 0.535365 | 1.3:-16498717 | None:intergenic |
ATCCAATCTATGCTGAAAGA+AGG | 0.535733 | 1.3:+16497769 | MS.gene62993:CDS |
ACATCTGCAACTGAAACTAA+AGG | 0.536029 | 1.3:+16501740 | MS.gene62993:CDS |
TCCCAGGGATGCTTGTGGAG+GGG | 0.536283 | 1.3:+16495161 | MS.gene62993:CDS |
TTGAGGAAATTGGTGGTGCA+AGG | 0.536879 | 1.3:+16503395 | MS.gene62993:CDS |
ATATCCACTGATAATCTCAC+TGG | 0.537469 | 1.3:-16498850 | None:intergenic |
AGGGATAGCCGTATTGTGCC+TGG | 0.537772 | 1.3:+16503870 | MS.gene62993:CDS |
GATGATTCCTAGAACATTGG+CGG | 0.537916 | 1.3:+16504743 | MS.gene62993:CDS |
CTATTTATCAGACTATGTGC+AGG | 0.538247 | 1.3:+16503850 | MS.gene62993:intron |
GATGACACTGCAGATAAACT+TGG | 0.538756 | 1.3:+16495404 | MS.gene62993:CDS |
GTCCTTCCCAGGGATGCTTG+TGG | 0.540707 | 1.3:+16495156 | MS.gene62993:CDS |
CTGAGGCCAGCTAGCACACA+TGG | 0.542293 | 1.3:-16495054 | None:intergenic |
TCCCCTCCACAAGCATCCCT+GGG | 0.542524 | 1.3:-16495162 | None:intergenic |
CTCTTGACAGATTTGCAGAA+GGG | 0.543219 | 1.3:+16493411 | MS.gene62993:CDS |
AGCATAGATTGGATACCATA+GGG | 0.543739 | 1.3:-16497760 | None:intergenic |
TGTTGGTAGTATAAAGAGAA+TGG | 0.546633 | 1.3:+16500126 | MS.gene62993:CDS |
CGCACTTCCCTCGGTCCCAA+TGG | 0.547576 | 1.3:+16497868 | MS.gene62993:CDS |
TGCGGGTGATGGTGGAGAGT+TGG | 0.548163 | 1.3:-16497849 | None:intergenic |
CTGGTATAGAGGAAGAGCTT+CGG | 0.548267 | 1.3:+16493621 | MS.gene62993:CDS |
GTTTCAGTTGAGGAAATTGG+TGG | 0.550129 | 1.3:+16503388 | MS.gene62993:CDS |
AATATTGGACGAACTTGTTG+AGG | 0.552189 | 1.3:+16499766 | MS.gene62993:CDS |
ATTGAAAGAGCAGTTGATGA+TGG | 0.555713 | 1.3:+16503625 | MS.gene62993:CDS |
CTTGAAGCTGCAGAAATGGT+AGG | 0.559127 | 1.3:+16497733 | MS.gene62993:CDS |
GAGAAGGAACATGAAACGGT+TGG | 0.559451 | 1.3:-16491806 | None:intergenic |
ATGAAACGGTTGGTTTGTTG+TGG | 0.564750 | 1.3:-16491796 | None:intergenic |
CATCATCAGTATCATCATCT+GGG | 0.566233 | 1.3:-16494147 | None:intergenic |
ACAAGTAGCCGATGCTGCAA+GGG | 0.568105 | 1.3:+16493655 | MS.gene62993:CDS |
TTGGACGAACTTGTTGAGGA+AGG | 0.568925 | 1.3:+16499770 | MS.gene62993:CDS |
GAGTGCATCACCAAGTATTG+TGG | 0.569897 | 1.3:-16495084 | None:intergenic |
CTGCAGCTCCAGGCACAATA+CGG | 0.572095 | 1.3:-16503878 | None:intergenic |
CTCCACAAGCATCCCTGGGA+AGG | 0.572336 | 1.3:-16495158 | None:intergenic |
CACTTCAAGTTCATTTACAA+TGG | 0.572457 | 1.3:-16498688 | None:intergenic |
GAACTGGAGCCGCTATTGGT+GGG | 0.573340 | 1.3:+16491966 | MS.gene62993:CDS |
GAAATGGTAGGTTTACCCTA+TGG | 0.575454 | 1.3:+16497745 | MS.gene62993:CDS |
GTCGCAAAGCTCTTAGGAGG+AGG | 0.576535 | 1.3:+16500055 | MS.gene62993:CDS |
TATAAGCCATCTAGTGGTGA+AGG | 0.577042 | 1.3:+16494361 | MS.gene62993:CDS |
ACTTCATTTATGCCTGCCAA+TGG | 0.577218 | 1.3:+16496173 | MS.gene62993:CDS |
AAAGAGAATGGAAAAGGCAA+AGG | 0.578368 | 1.3:+16500138 | MS.gene62993:CDS |
GAATGCTGGGCTAAATGCAA+TGG | 0.579804 | 1.3:+16504767 | MS.gene62993:CDS |
TAGGTGGCTGTGTTTGCTGG+TGG | 0.581109 | 1.3:+16501710 | MS.gene62993:intron |
AAACCCTGTAAACTTTAATG+TGG | 0.581302 | 1.3:+16500021 | MS.gene62993:CDS |
CTAAAACTGGCAAATCTACA+GGG | 0.581494 | 1.3:+16494035 | MS.gene62993:CDS |
AGGGAATTGGAGCCATTGCA+GGG | 0.581967 | 1.3:-16494409 | None:intergenic |
AGTTGGCATTGATTTGGACG+AGG | 0.582981 | 1.3:+16504836 | MS.gene62993:CDS |
AAGATACTTGATACCTCAAG+TGG | 0.584669 | 1.3:-16493722 | None:intergenic |
CATCCCAGTGAGATTATCAG+TGG | 0.585054 | 1.3:+16498846 | MS.gene62993:CDS |
CATTGGGACCGAGGGAAGTG+CGG | 0.586602 | 1.3:-16497867 | None:intergenic |
TGAGGAAATTGGTGGTGCAA+GGG | 0.587609 | 1.3:+16503396 | MS.gene62993:CDS |
GCTCTTGACAGATTTGCAGA+AGG | 0.588709 | 1.3:+16493410 | MS.gene62993:CDS |
TGATGTTGATGAATATCGGC+AGG | 0.589319 | 1.3:+16494165 | MS.gene62993:CDS |
AGGGTTACCATTGGGACCGA+GGG | 0.590918 | 1.3:-16497875 | None:intergenic |
CAACAAGAGGAAATTGGTGA+TGG | 0.592907 | 1.3:+16498753 | MS.gene62993:CDS |
AAATAACTTGCTCCTTGTCA+CGG | 0.594985 | 1.3:-16499811 | None:intergenic |
TAAAGTAGAAGAGCTCATCA+AGG | 0.595111 | 1.3:+16502924 | MS.gene62993:CDS |
AACCTAACAAACCTTAGCAA+TGG | 0.596276 | 1.3:-16498880 | None:intergenic |
TGCAGCTTCAAGCGTTACGG+TGG | 0.597186 | 1.3:-16497722 | None:intergenic |
TGATGGAGTGAACACTTACA+AGG | 0.597565 | 1.3:+16503642 | MS.gene62993:CDS |
CTAGAGTTTACTAACCTCCT+CGG | 0.598512 | 1.3:-16494462 | None:intergenic |
GGCTGGGAAAGCTCAACAAG+AGG | 0.600488 | 1.3:+16498740 | MS.gene62993:CDS |
CAATATGGATGTCCGTGACA+AGG | 0.600789 | 1.3:+16499799 | MS.gene62993:CDS |
TAATAGCTGCTCACAAAGCA+GGG | 0.602386 | 1.3:+16496102 | MS.gene62993:CDS |
TGAAATTGAGTTAGCCAAGA+GGG | 0.602609 | 1.3:+16503905 | MS.gene62993:CDS |
ATTGCAGGGGCATGTGCACA+AGG | 0.603340 | 1.3:-16494395 | None:intergenic |
GGATTCTGTAGTCCTTCCCA+GGG | 0.604243 | 1.3:+16495146 | MS.gene62993:CDS |
TGTCACAGACACTCCACTTG+AGG | 0.604509 | 1.3:+16493709 | MS.gene62993:CDS |
AGACCTACTAGCGGGAGTTG+AGG | 0.607296 | 1.3:+16494334 | MS.gene62993:CDS |
TAGCTACAGAACCAGTCGTA+CGG | 0.607987 | 1.3:-16503233 | None:intergenic |
TTGCATATTGGCAAGTGATG+TGG | 0.609804 | 1.3:+16495125 | MS.gene62993:CDS |
GTTGGCATTGATTTGGACGA+GGG | 0.610122 | 1.3:+16504837 | MS.gene62993:CDS |
AAATTATTCGAAAACTGAAG+AGG | 0.610195 | 1.3:+16502900 | MS.gene62993:CDS |
TTCTACAACAGGCAATCCGA+GGG | 0.610250 | 1.3:-16493681 | None:intergenic |
TCCTCCGCTTACAATCACTT+GGG | 0.610330 | 1.3:-16502965 | None:intergenic |
TGTCCACATTAAAGTTTACA+GGG | 0.611569 | 1.3:-16500024 | None:intergenic |
CAACATATCCAAGATCATCT+GGG | 0.611755 | 1.3:-16503360 | None:intergenic |
ATATACCAAAGCCATTGCTA+AGG | 0.614733 | 1.3:+16498869 | MS.gene62993:CDS |
GGACTTAGAGATAGGCTCAA+GGG | 0.614747 | 1.3:-16494428 | None:intergenic |
ACCAGCAAACCCACCAATAG+CGG | 0.615654 | 1.3:-16491975 | None:intergenic |
GGGACTTAGAGATAGGCTCA+AGG | 0.618985 | 1.3:-16494429 | None:intergenic |
TCCCAAATCAGCAGCCGAGG+AGG | 0.621887 | 1.3:+16494448 | MS.gene62993:CDS |
CAGCTCTAAGTAAAGAATCA+GGG | 0.622102 | 1.3:-16494069 | None:intergenic |
AGCACCATGAAGTAACTCGC+CGG | 0.622286 | 1.3:-16498799 | None:intergenic |
CGTGTCGCAAAGCTCTTAGG+AGG | 0.623567 | 1.3:+16500052 | MS.gene62993:CDS |
ATTCTACAACAGGCAATCCG+AGG | 0.628425 | 1.3:-16493682 | None:intergenic |
GGCTGTTATAAGCCATCTAG+TGG | 0.629360 | 1.3:+16494355 | MS.gene62993:CDS |
TGCATGCACTGTGCTACGGG+TGG | 0.630144 | 1.3:+16505206 | MS.gene62993:CDS |
AAGTCCCAAATCAGCAGCCG+AGG | 0.631473 | 1.3:+16494445 | MS.gene62993:CDS |
CTGAAATTGAGTTAGCCAAG+AGG | 0.632775 | 1.3:+16503904 | MS.gene62993:CDS |
TATCCACTGATAATCTCACT+GGG | 0.639601 | 1.3:-16498849 | None:intergenic |
AAGTAATTTACTTAGCCATG+TGG | 0.643526 | 1.3:-16504899 | None:intergenic |
GTTGTGGTTGTTGAAGAATG+GGG | 0.643585 | 1.3:-16491780 | None:intergenic |
TATTTATCAGACTATGTGCA+GGG | 0.644306 | 1.3:+16503851 | MS.gene62993:intron |
GCCCAAGTGATTGTAAGCGG+AGG | 0.645935 | 1.3:+16502964 | MS.gene62993:CDS |
ACATGTTTGGGATCTCCACA+TGG | 0.646020 | 1.3:+16504884 | MS.gene62993:CDS |
CAGGGAGTAGACCTACTAGC+GGG | 0.651585 | 1.3:+16494326 | MS.gene62993:intron |
GAAACGTCCAACAACAGCGA+TGG | 0.657732 | 1.3:-16494125 | None:intergenic |
GGGAATTGGAGCCATTGCAG+GGG | 0.657844 | 1.3:-16494408 | None:intergenic |
AGTATTGTGGAGCTTTACTG+AGG | 0.661521 | 1.3:-16495071 | None:intergenic |
TATCGGAAGATTGAGAGTGA+AGG | 0.663850 | 1.3:-16491741 | None:intergenic |
CGTAATAGTACAGTTGTTCG+GGG | 0.666054 | 1.3:+16500082 | MS.gene62993:CDS |
GGTGCCCAAGTGATTGTAAG+CGG | 0.667648 | 1.3:+16502961 | MS.gene62993:CDS |
ATAGCGGCTCCAGTTCCAGT+CGG | 0.668116 | 1.3:-16491959 | None:intergenic |
GCAGCCACTTATCATTACTG+TGG | 0.673374 | 1.3:+16495361 | MS.gene62993:intron |
GAATGGGGTAGAGAAAGAAG+GGG | 0.674497 | 1.3:-16491765 | None:intergenic |
AGTGTGATGATAGTGCCGAC+TGG | 0.677986 | 1.3:+16491944 | MS.gene62993:CDS |
ATTATGGCGAAACCGGCTGG+AGG | 0.695300 | 1.3:+16506479 | MS.gene62993:CDS |
GATGTTGATGAATATCGGCA+GGG | 0.699845 | 1.3:+16494166 | MS.gene62993:CDS |
GTGGAGATCCCAAACATGTG+TGG | 0.710523 | 1.3:-16504880 | None:intergenic |
GTTCTGAGAAATGATGCTGT+TGG | 0.720603 | 1.3:+16500109 | MS.gene62993:CDS |
ACAGGGAGTAGACCTACTAG+CGG | 0.738946 | 1.3:+16494325 | MS.gene62993:intron |
AAACTGGCAAATCTACAGGG+AGG | 0.758367 | 1.3:+16494038 | MS.gene62993:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 16491737 | 16506544 | 16491737 | ID=MS.gene62993 |
chr1.3 | mRNA | 16491737 | 16506544 | 16491737 | ID=MS.gene62993.t1;Parent=MS.gene62993 |
chr1.3 | exon | 16491737 | 16491844 | 16491737 | ID=MS.gene62993.t1.exon1;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16491737 | 16491844 | 16491737 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16491926 | 16492060 | 16491926 | ID=MS.gene62993.t1.exon2;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16491926 | 16492060 | 16491926 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16493350 | 16493466 | 16493350 | ID=MS.gene62993.t1.exon3;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16493350 | 16493466 | 16493350 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16493602 | 16493730 | 16493602 | ID=MS.gene62993.t1.exon4;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16493602 | 16493730 | 16493602 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16494016 | 16494192 | 16494016 | ID=MS.gene62993.t1.exon5;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16494016 | 16494192 | 16494016 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16494329 | 16494469 | 16494329 | ID=MS.gene62993.t1.exon6;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16494329 | 16494469 | 16494329 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16495036 | 16495221 | 16495036 | ID=MS.gene62993.t1.exon7;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16495036 | 16495221 | 16495036 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16495365 | 16495436 | 16495365 | ID=MS.gene62993.t1.exon8;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16495365 | 16495436 | 16495365 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16496068 | 16496194 | 16496068 | ID=MS.gene62993.t1.exon9;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16496068 | 16496194 | 16496068 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16497722 | 16497889 | 16497722 | ID=MS.gene62993.t1.exon10;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16497722 | 16497889 | 16497722 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16498628 | 16498890 | 16498628 | ID=MS.gene62993.t1.exon11;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16498628 | 16498890 | 16498628 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16499758 | 16499904 | 16499758 | ID=MS.gene62993.t1.exon12;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16499758 | 16499904 | 16499758 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16499998 | 16500159 | 16499998 | ID=MS.gene62993.t1.exon13;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16499998 | 16500159 | 16499998 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16501713 | 16501790 | 16501713 | ID=MS.gene62993.t1.exon14;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16501713 | 16501790 | 16501713 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16502895 | 16503028 | 16502895 | ID=MS.gene62993.t1.exon15;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16502895 | 16503028 | 16502895 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16503185 | 16503257 | 16503185 | ID=MS.gene62993.t1.exon16;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16503185 | 16503257 | 16503185 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16503340 | 16503417 | 16503340 | ID=MS.gene62993.t1.exon17;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16503340 | 16503417 | 16503340 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16503541 | 16503663 | 16503541 | ID=MS.gene62993.t1.exon18;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16503541 | 16503663 | 16503541 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16503861 | 16503955 | 16503861 | ID=MS.gene62993.t1.exon19;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16503861 | 16503955 | 16503861 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16504701 | 16504910 | 16504701 | ID=MS.gene62993.t1.exon20;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16504701 | 16504910 | 16504701 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16505176 | 16505233 | 16505176 | ID=MS.gene62993.t1.exon21;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16505176 | 16505233 | 16505176 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
chr1.3 | exon | 16506476 | 16506544 | 16506476 | ID=MS.gene62993.t1.exon22;Parent=MS.gene62993.t1 |
chr1.3 | CDS | 16506476 | 16506544 | 16506476 | ID=cds.MS.gene62993.t1;Parent=MS.gene62993.t1 |
Gene Sequence |
Protein sequence |