AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77306

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77306.t1 MTR_7g067470 99.620 527 2 0 1 527 1 527 0.0 1058
MS.gene77306.t1 MTR_7g113470 98.102 527 10 0 1 527 1 527 0.0 1040
MS.gene77306.t1 MTR_5g087560 36.450 524 312 8 6 516 11 526 4.06e-100 313
MS.gene77306.t1 MTR_8g088270 34.915 527 312 9 14 516 15 534 1.87e-89 285
MS.gene77306.t1 MTR_3g109925 34.834 511 314 7 20 517 26 530 1.92e-85 274
MS.gene77306.t1 MTR_3g086330 33.333 522 334 8 6 517 14 531 1.68e-83 269
MS.gene77306.t1 MTR_3g109925 31.944 504 281 7 20 517 26 473 1.34e-68 228
MS.gene77306.t1 MTR_7g406870 30.435 506 330 8 27 516 26 525 2.81e-62 213
MS.gene77306.t1 MTR_2g013540 29.167 528 348 11 6 517 7 524 4.00e-62 213
MS.gene77306.t1 MTR_6g032870 28.916 498 341 8 30 520 33 524 7.99e-53 188
MS.gene77306.t1 MTR_1g030650 28.257 499 343 8 30 520 36 527 1.45e-51 184
MS.gene77306.t1 MTR_7g406870 28.537 417 278 7 116 516 1 413 6.07e-40 150
MS.gene77306.t1 MTR_8g105970 31.023 303 182 9 189 485 75 356 2.16e-34 133
MS.gene77306.t1 MTR_3g465910 87.179 78 9 1 381 458 459 535 6.29e-34 135
MS.gene77306.t1 MTR_2g013540 25.661 378 264 8 154 517 1 375 1.24e-28 118
MS.gene77306.t1 MTR_3g466600 90.196 51 5 0 431 481 1 51 7.53e-24 95.1
MS.gene77306.t1 MTR_3g465900 84.783 46 6 1 483 527 1 46 3.05e-17 81.3
MS.gene77306.t1 MTR_1g090140 24.077 569 327 22 16 525 40 562 8.05e-14 74.3
MS.gene77306.t1 MTR_1g090130 22.598 562 344 20 16 525 40 562 3.95e-13 72.4
MS.gene77306.t1 MTR_8g017080 23.704 540 333 17 16 509 41 547 5.28e-13 72.0
MS.gene77306.t1 MTR_0991s0010 37.273 110 63 2 26 131 65 172 9.29e-12 64.3
MS.gene77306.t1 MTR_1g017390 36.434 129 74 3 26 148 65 191 6.37e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77306.t1 AT5G20890 88.994 527 58 0 1 527 1 527 0.0 941
MS.gene77306.t1 AT3G11830 36.731 520 316 7 6 516 11 526 3.36e-96 303
MS.gene77306.t1 AT3G20050 34.981 526 313 8 14 516 15 534 1.37e-95 301
MS.gene77306.t1 AT3G11830 36.538 520 315 8 6 516 11 524 6.19e-94 297
MS.gene77306.t1 AT3G18190 35.010 517 317 8 14 517 24 534 3.60e-89 284
MS.gene77306.t1 AT1G24510 32.634 524 329 9 8 517 18 531 2.84e-82 266
MS.gene77306.t1 AT1G24510 32.211 475 300 8 57 517 12 478 1.10e-70 234
MS.gene77306.t1 AT1G24510 31.533 463 295 8 69 517 1 455 4.66e-65 218
MS.gene77306.t1 AT3G02530 30.784 510 323 11 27 516 26 525 1.12e-63 217
MS.gene77306.t1 AT5G16070 30.368 517 331 11 27 524 26 532 8.20e-63 214
MS.gene77306.t1 AT5G26360 28.897 526 352 11 6 517 7 524 7.93e-57 199
MS.gene77306.t1 AT3G03960 28.916 498 341 9 30 520 39 530 1.01e-50 182
MS.gene77306.t1 AT2G33210 24.821 560 328 24 16 522 40 559 8.58e-17 84.0
MS.gene77306.t1 AT3G23990 24.460 556 333 20 16 521 39 557 7.53e-16 80.9
MS.gene77306.t1 AT2G33210 24.685 555 330 23 16 522 40 554 2.30e-15 79.3
MS.gene77306.t1 AT3G13470 37.069 116 65 3 26 136 70 182 9.27e-11 64.7

Find 122 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTGCCATTACCATTTC+AGG 0.181073 7.2:-36169218 None:intergenic
TTTATTCTTGACAAGAAAAT+TGG 0.237404 7.2:+36168083 MS.gene77306:CDS
CTCCTGGTTTCTTTATAATC+TGG 0.268796 7.2:-36167793 None:intergenic
CTTTGCATTCTCTATGCGTT+TGG 0.270372 7.2:-36168117 None:intergenic
CTTGTCTTGCGAGAGAATTT+TGG 0.272978 7.2:-36167073 None:intergenic
GGCTATGGCTATTGCTGATT+TGG 0.287547 7.2:+36165796 MS.gene77306:CDS
CTTTGCTGATGCAGGAATAT+TGG 0.298904 7.2:+36168340 MS.gene77306:CDS
AATCTGGACAGATTCTAAAT+TGG 0.300526 7.2:-36167777 None:intergenic
ACCTCTGTTGTTGTATTGGC+TGG 0.330206 7.2:+36166099 MS.gene77306:CDS
GAGCGTCTGGCTCTGGTAAC+TGG 0.330579 7.2:+36168392 MS.gene77306:CDS
TTATGATTTCATCGACTCTA+AGG 0.332845 7.2:-36169990 None:intergenic
TTTGCATTCTCTATGCGTTT+GGG 0.352812 7.2:-36168116 None:intergenic
CCGTGTTCGTGTCGACTCTA+TGG 0.366141 7.2:+36168193 MS.gene77306:CDS
GCATTATCAGCAATGGTTGT+TGG 0.371197 7.2:-36169320 None:intergenic
TTGTACAGTCATCATTTGTC+GGG 0.379728 7.2:+36165774 MS.gene77306:intron
CTTGACAAGAAAATTGGTAT+TGG 0.380814 7.2:+36168089 MS.gene77306:CDS
GCATCAGCAAAGAGCTCCTC+TGG 0.385618 7.2:-36168329 None:intergenic
ATTCTGTCTTCTCTCCTCCT+TGG 0.391078 7.2:-36170021 None:intergenic
GAAAAGGTGAACAAGATAAT+AGG 0.393726 7.2:+36168260 MS.gene77306:CDS
CATTATCAGCAATGGTTGTT+GGG 0.396407 7.2:-36169319 None:intergenic
CAGCAGTACATCCCTCGTTC+TGG 0.402972 7.2:-36169388 None:intergenic
GAAAGGAGAGCGGGCGAGAA+TGG 0.403189 7.2:+36165447 MS.gene77306:CDS
AACTACCTCTGTTGTTGTAT+TGG 0.419643 7.2:+36166095 MS.gene77306:CDS
GGTTGGAGACATGTTTCAAC+GGG 0.423103 7.2:+36169900 MS.gene77306:intron
TACCATTCCCTTTGGGCCTA+AGG 0.426340 7.2:-36165828 None:intergenic
CTTATTGAAGAGATTATGAT+TGG 0.428527 7.2:+36168473 MS.gene77306:CDS
CCTCTGTTGTTGTATTGGCT+GGG 0.432678 7.2:+36166100 MS.gene77306:CDS
GAAGGAGAAAATGAAAGAAA+AGG 0.438401 7.2:+36168244 MS.gene77306:CDS
GAGGAGCTCTTTGCTGATGC+AGG 0.439320 7.2:+36168332 MS.gene77306:CDS
GATAAAATTCTGCAGTCAAC+GGG 0.441555 7.2:+36165946 MS.gene77306:CDS
TGGAGGCGGGTGGCCTGAAA+TGG 0.444431 7.2:+36169205 MS.gene77306:CDS
TTCTGGTGTTGCAATGGGGC+AGG 0.444806 7.2:+36168517 MS.gene77306:CDS
ACAGACAAGGTGAAGATATA+CGG 0.446868 7.2:+36168167 MS.gene77306:CDS
TTTGTACAGTCATCATTTGT+CGG 0.449738 7.2:+36165773 MS.gene77306:intron
GAACCTGCTATTATAGTCAT+TGG 0.450616 7.2:-36166168 None:intergenic
CTCAGACTGTCAATGATAGC+AGG 0.455917 7.2:+36169174 MS.gene77306:CDS
GCTGGAATTGATGTCATCTC+TGG 0.462467 7.2:+36169407 MS.gene77306:CDS
AATGATAGCAGGGTGTTACT+TGG 0.464868 7.2:+36169185 MS.gene77306:CDS
GGCAAAGGAAATTGATGCAT+TGG 0.465686 7.2:+36169232 MS.gene77306:CDS
GATGAAGCAAGTGAAGAGAA+AGG 0.472529 7.2:+36165430 MS.gene77306:CDS
TGCCCAAGCTTAACAGACTC+AGG 0.474350 7.2:-36168443 None:intergenic
TTGGGATAGCCAAGAGTGCC+CGG 0.474753 7.2:-36169301 None:intergenic
AACCCTGAGTCTGTTAAGCT+TGG 0.475389 7.2:+36168440 MS.gene77306:CDS
TTTAAGGGAGGCAGAAAAGT+TGG 0.477988 7.2:+36166128 MS.gene77306:CDS
GCTAAAGTTGCTGAGATTGA+AGG 0.478957 7.2:+36168215 MS.gene77306:CDS
GATTTGGTTAAGACTACCTT+AGG 0.481337 7.2:+36165812 MS.gene77306:CDS
GTCATCATTTGTCGGGGCTA+TGG 0.483139 7.2:+36165781 MS.gene77306:intron
AGCAGGGTGTTACTTGGAGG+CGG 0.483620 7.2:+36169191 MS.gene77306:CDS
AAAGTTCAAGATGATGAAGT+TGG 0.486158 7.2:+36166066 MS.gene77306:CDS
CTCTGTTGTTGTATTGGCTG+GGG 0.488885 7.2:+36166101 MS.gene77306:CDS
TGGTATTGAGCGTCTGGCTC+TGG 0.490993 7.2:+36168385 MS.gene77306:CDS
CAGCTGGGTTATCAATATGA+AGG 0.502529 7.2:-36166020 None:intergenic
CATTGCTGATAATGCTGGAT+TGG 0.503219 7.2:+36169328 MS.gene77306:CDS
ACCCTGAGTCTGTTAAGCTT+GGG 0.506927 7.2:+36168441 MS.gene77306:CDS
ACAACCATTGCTGATAATGC+TGG 0.508371 7.2:+36169323 MS.gene77306:CDS
CAGAACGAGGGATGTACTGC+TGG 0.510419 7.2:+36169389 MS.gene77306:CDS
TCAACGAGGACTTTAGCAGC+TGG 0.514395 7.2:-36166036 None:intergenic
ATTCTGCAGTCAACGGGTAG+AGG 0.514855 7.2:+36165952 MS.gene77306:CDS
TGAGATTGAAGGAGCTGAGA+AGG 0.516192 7.2:+36168226 MS.gene77306:CDS
AAGTGAAGAGAAAGGAGAGC+GGG 0.523721 7.2:+36165438 MS.gene77306:CDS
CCTCGTTCTGGTGCTCAGCA+CGG 0.531696 7.2:-36169376 None:intergenic
GAGCACACTCAGCCGCCATT+CGG 0.533449 7.2:-36166800 None:intergenic
CGGGTGGCCTGAAATGGTAA+TGG 0.539649 7.2:+36169211 MS.gene77306:CDS
GGATAAAATTCTGCAGTCAA+CGG 0.542081 7.2:+36165945 MS.gene77306:intron
CATCCAATGACTATAATAGC+AGG 0.543016 7.2:+36166165 MS.gene77306:CDS
TGAAGCATTCAAAGTCAAGC+AGG 0.543590 7.2:+36169930 MS.gene77306:CDS
TACCTTAGGCCCAAAGGGAA+TGG 0.543614 7.2:+36165826 MS.gene77306:CDS
AAGACTACCTTAGGCCCAAA+GGG 0.550690 7.2:+36165821 MS.gene77306:CDS
TGTATTGCTATCTGCAACAG+AGG 0.552549 7.2:+36169954 MS.gene77306:CDS
GGGTGTTACTTGGAGGCGGG+TGG 0.558203 7.2:+36169195 MS.gene77306:CDS
CAACGAGGACTTTAGCAGCT+GGG 0.558853 7.2:-36166035 None:intergenic
ATGACCTCTCAGCCTCATCA+AGG 0.561780 7.2:-36169127 None:intergenic
GATAGCAGGGTGTTACTTGG+AGG 0.563489 7.2:+36169188 MS.gene77306:CDS
CAAAATTCTCTCGCAAGACA+AGG 0.569659 7.2:+36167074 MS.gene77306:CDS
AGCTGGGTTATCAATATGAA+GGG 0.569845 7.2:-36166019 None:intergenic
CAAGATGATGAAGTTGGCGA+TGG 0.570613 7.2:+36166072 MS.gene77306:CDS
TTCTGCAGTCAACGGGTAGA+GGG 0.570922 7.2:+36165953 MS.gene77306:CDS
CAATAGTTCTGAGAGGTGCT+AGG 0.574201 7.2:+36168546 MS.gene77306:CDS
GCCTGAAATGGTAATGGCAA+AGG 0.576296 7.2:+36169217 MS.gene77306:CDS
GAGTCTATCAGTGATCCTCC+TGG 0.577363 7.2:-36167809 None:intergenic
TAGACTTGATGAACATTGCA+AGG 0.577688 7.2:+36167037 MS.gene77306:CDS
TGAAGAGATTATGATTGGTG+AGG 0.578048 7.2:+36168478 MS.gene77306:CDS
AACAGACTCAGGGTTGTCAA+AGG 0.580150 7.2:-36168432 None:intergenic
GCAGGGTGTTACTTGGAGGC+GGG 0.586668 7.2:+36169192 MS.gene77306:CDS
CAATCCAGCATTATCAGCAA+TGG 0.589615 7.2:-36169327 None:intergenic
TGCATTGGTAGAGAAGGTTG+TGG 0.590099 7.2:+36166827 MS.gene77306:CDS
GTGAACAAGATAATAGGTCA+TGG 0.590525 7.2:+36168266 MS.gene77306:CDS
GCATTGGCTAGAAAGACTCC+AGG 0.593187 7.2:+36169248 MS.gene77306:CDS
CATCAGCAAAGAGCTCCTCT+GGG 0.593588 7.2:-36168328 None:intergenic
AAATCATAACTTGTGCTCCA+AGG 0.594768 7.2:+36170004 MS.gene77306:CDS
TCAGACTGTCAATGATAGCA+GGG 0.596838 7.2:+36169175 MS.gene77306:CDS
TAAGACTACCTTAGGCCCAA+AGG 0.597137 7.2:+36165820 MS.gene77306:CDS
CATAGAGTCGACACGAACAC+GGG 0.600968 7.2:-36168192 None:intergenic
CCATAGAGTCGACACGAACA+CGG 0.601800 7.2:-36168193 None:intergenic
GTGGACAACAAAGAAGATGC+TGG 0.604567 7.2:+36166846 MS.gene77306:CDS
GAAGTTACTGTTACTAATGA+CGG 0.604825 7.2:+36165979 MS.gene77306:CDS
CCGTGCTGAGCACCAGAACG+AGG 0.605089 7.2:+36169376 MS.gene77306:CDS
GCCCAAGCTTAACAGACTCA+GGG 0.607943 7.2:-36168442 None:intergenic
TCGTAATGCATTGGTAGAGA+AGG 0.612856 7.2:+36166821 MS.gene77306:CDS
AGGTTGGAGACATGTTTCAA+CGG 0.614227 7.2:+36169899 MS.gene77306:intron
CAGCCACCATGTCCTTGATG+AGG 0.616535 7.2:+36169115 MS.gene77306:intron
CACTGCAATGGACACAGACA+AGG 0.617081 7.2:+36168154 MS.gene77306:CDS
ACTAGTTGCAAACACTGCAA+TGG 0.618834 7.2:+36168142 MS.gene77306:CDS
TGGGATAGCCAAGAGTGCCC+GGG 0.629291 7.2:-36169300 None:intergenic
TGTACAGTCATCATTTGTCG+GGG 0.632087 7.2:+36165775 MS.gene77306:intron
TCTCAGCCTCATCAAGGACA+TGG 0.634180 7.2:-36169121 None:intergenic
TGAGTGTGCTCGTAATGCAT+TGG 0.636791 7.2:+36166812 MS.gene77306:CDS
GTCCAGATTATAAAGAAACC+AGG 0.640531 7.2:+36167791 MS.gene77306:CDS
AGATGCTGTAATGAGACTAA+AGG 0.646296 7.2:+36167119 MS.gene77306:CDS
CAAGTGAAGAGAAAGGAGAG+CGG 0.646384 7.2:+36165437 MS.gene77306:CDS
CGTGCTGAGCACCAGAACGA+GGG 0.655321 7.2:+36169377 MS.gene77306:CDS
CAGCCTCATCAAGGACATGG+TGG 0.656164 7.2:-36169118 None:intergenic
ATGTCCTTGATGAGGCTGAG+AGG 0.658084 7.2:+36169123 MS.gene77306:CDS
CGTCTGGCTCTGGTAACTGG+TGG 0.662358 7.2:+36168395 MS.gene77306:CDS
ATTGCTATCTGCAACAGAGG+CGG 0.662677 7.2:+36169957 MS.gene77306:CDS
TCATAACTTGTGCTCCAAGG+AGG 0.680461 7.2:+36170007 MS.gene77306:CDS
CCCAGCCAATACAACAACAG+AGG 0.708815 7.2:-36166100 None:intergenic
GTTGATTTACAATTTCCCAG+AGG 0.717017 7.2:+36168313 MS.gene77306:CDS
GCATGCACAATAGTTCTGAG+AGG 0.722642 7.2:+36168539 MS.gene77306:CDS
CAGATTATAAAGAAACCAGG+AGG 0.727696 7.2:+36167794 MS.gene77306:CDS
GTTGGAGACATGTTTCAACG+GGG 0.797013 7.2:+36169901 MS.gene77306:CDS
GAACTTTAGAAATGTCAACG+AGG 0.815142 7.2:-36166050 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAAAAAAAATTAAATA+AGG - chr7.2:36165356-36165375 None:intergenic 0.0%
!!! AATTTTTTTTAATATATATT+TGG + chr7.2:36165361-36165380 MS.gene77306:intron 0.0%
!! AAAGTTTATCAGAATTATAA+AGG - chr7.2:36166648-36166667 None:intergenic 15.0%
!! ATCAATATATTTGACATTAT+CGG + chr7.2:36166760-36166779 MS.gene77306:intron 15.0%
!!! ATTTTAGAAAAATATCATGT+AGG + chr7.2:36169805-36169824 MS.gene77306:intron 15.0%
!!! TATCTTATACATAAATTTTC+TGG + chr7.2:36166993-36167012 MS.gene77306:intron 15.0%
!! AACTAAGTAATTCACATATT+TGG + chr7.2:36165909-36165928 MS.gene77306:intron 20.0%
!! AACTAATTGTGTTTATGAAT+TGG + chr7.2:36165749-36165768 MS.gene77306:intron 20.0%
!! AATATGTAAAAGAACAACAT+TGG - chr7.2:36168606-36168625 None:intergenic 20.0%
!! ACTAAGTAATTCACATATTT+GGG + chr7.2:36165910-36165929 MS.gene77306:intron 20.0%
!! CCATCTTTGTAATTAAATTA+AGG + chr7.2:36166403-36166422 MS.gene77306:intron 20.0%
!! CCTTAATTTAATTACAAAGA+TGG - chr7.2:36166406-36166425 None:intergenic 20.0%
!! CTATGTACATATTATAAGAA+TGG - chr7.2:36167385-36167404 None:intergenic 20.0%
!! GAATTTACAATGACAAAAAA+AGG - chr7.2:36168579-36168598 None:intergenic 20.0%
!! GAGTAAAAAGTAAAAATTGT+GGG + chr7.2:36166572-36166591 MS.gene77306:intron 20.0%
!! TGAGTAAAAAGTAAAAATTG+TGG + chr7.2:36166571-36166590 MS.gene77306:intron 20.0%
!! TTTATTCTTGACAAGAAAAT+TGG + chr7.2:36168083-36168102 MS.gene77306:CDS 20.0%
!! TTTATTGAAGGTTAATGTAA+AGG + chr7.2:36168769-36168788 MS.gene77306:intron 20.0%
!!! AAGAATGGATTATAAATTGT+AGG - chr7.2:36167370-36167389 None:intergenic 20.0%
!!! AATGATAACGATAAATTCAA+AGG - chr7.2:36166918-36166937 None:intergenic 20.0%
!!! ATTTCCATTTTCATATTACA+GGG + chr7.2:36167749-36167768 MS.gene77306:intron 20.0%
!!! TAGTATTTCTGTTTCTAAAT+TGG + chr7.2:36168042-36168061 MS.gene77306:intron 20.0%
!!! TCATTCTATAATCTTTTTCT+TGG + chr7.2:36169466-36169485 MS.gene77306:intron 20.0%
!!! TTTTTTTTCTTGAATTCTTG+AGG + chr7.2:36168632-36168651 MS.gene77306:intron 20.0%
! AAATTGGACACATTATTAGT+AGG - chr7.2:36167166-36167185 None:intergenic 25.0%
! AACTAAAGGAAGAATAAAAG+TGG - chr7.2:36166512-36166531 None:intergenic 25.0%
! AATGAAATACTCTTATAACC+TGG - chr7.2:36167542-36167561 None:intergenic 25.0%
! AATTGGACACATTATTAGTA+GGG - chr7.2:36167165-36167184 None:intergenic 25.0%
! ACAATATGCATAAAACATCA+GGG - chr7.2:36166293-36166312 None:intergenic 25.0%
! AGCACAAAAACTGAATAAAA+GGG - chr7.2:36168747-36168766 None:intergenic 25.0%
! ATACAAATGGTTCATTATAC+AGG - chr7.2:36168006-36168025 None:intergenic 25.0%
! ATTAAGGACCAATTTATTGA+TGG + chr7.2:36166419-36166438 MS.gene77306:intron 25.0%
! ATTATACAGGATAGTTAAGT+TGG - chr7.2:36167993-36168012 None:intergenic 25.0%
! CTTATTGAAGAGATTATGAT+TGG + chr7.2:36168473-36168492 MS.gene77306:CDS 25.0%
! GGGTAATATTACTGAAAATT+TGG + chr7.2:36167845-36167864 MS.gene77306:intron 25.0%
! TAAACGATATTCACTGATAA+GGG + chr7.2:36167495-36167514 MS.gene77306:intron 25.0%
! TACAATATGCATAAAACATC+AGG - chr7.2:36166294-36166313 None:intergenic 25.0%
! TAGCCAAAAAGAAAATAGAA+AGG - chr7.2:36169850-36169869 None:intergenic 25.0%
! TTAGAAAACTGAAAAAACTG+TGG - chr7.2:36167434-36167453 None:intergenic 25.0%
! TTGTACATAAGATCTTTCTT+TGG + chr7.2:36166309-36166328 MS.gene77306:intron 25.0%
! TTTGCTAAATCCATCAAAAT+TGG - chr7.2:36167182-36167201 None:intergenic 25.0%
!! AAAATTTTACCATTCCCTTT+GGG - chr7.2:36165838-36165857 None:intergenic 25.0%
!! AAAGCATCAAAGTTTGATAA+TGG + chr7.2:36166610-36166629 MS.gene77306:intron 25.0%
!! AATAATGTGTCCAATTTTGA+TGG + chr7.2:36167169-36167188 MS.gene77306:intron 25.0%
!! CATTATCGGATATGATTTTT+AGG + chr7.2:36166774-36166793 MS.gene77306:intron 25.0%
!! CATTTCCATTTTCATATTAC+AGG + chr7.2:36167748-36167767 MS.gene77306:intron 25.0%
!! CTTCCTTTCTATTTTCTTTT+TGG + chr7.2:36169844-36169863 MS.gene77306:intron 25.0%
!! CTTTTATTCTTCCTTTAGTT+TGG + chr7.2:36166512-36166531 MS.gene77306:intron 25.0%
!! GATAAATTGATCAAGTTTTC+TGG + chr7.2:36168500-36168519 MS.gene77306:CDS 25.0%
!! GTTGTTCTTTTACATATTCA+GGG + chr7.2:36168608-36168627 MS.gene77306:intron 25.0%
!! TATATACTTTTCTGCATGAT+TGG + chr7.2:36167287-36167306 MS.gene77306:intron 25.0%
!! TATGTGAATTACTTAGTTCT+TGG - chr7.2:36165907-36165926 None:intergenic 25.0%
!! TGTTGTTCTTTTACATATTC+AGG + chr7.2:36168607-36168626 MS.gene77306:intron 25.0%
!!! ATAGACTCATTTTTAGATGA+AGG + chr7.2:36167824-36167843 MS.gene77306:CDS 25.0%
!!! ATTTCAGTTTTTTCTTTCCA+AGG + chr7.2:36166483-36166502 MS.gene77306:intron 25.0%
!!! CAATATTTTGAATTCAGTCA+AGG - chr7.2:36167970-36167989 None:intergenic 25.0%
!!! GTGTGTTTTATTTAGAAATC+TGG + chr7.2:36167324-36167343 MS.gene77306:intron 25.0%
!!! TAGACTCATTTTTAGATGAA+GGG + chr7.2:36167825-36167844 MS.gene77306:CDS 25.0%
!!! TTACTTTTTACTCATCTTTC+AGG - chr7.2:36166565-36166584 None:intergenic 25.0%
AAAAAAATCTCTTGCAATGG+AGG + chr7.2:36169271-36169290 MS.gene77306:CDS 30.0%
AAAGTTCAAGATGATGAAGT+TGG + chr7.2:36166066-36166085 MS.gene77306:CDS 30.0%
AAGAACATTAGAACAAACTG+TGG - chr7.2:36167593-36167612 None:intergenic 30.0%
AAGGATTGGAAGAAATTGAA+GGG - chr7.2:36167408-36167427 None:intergenic 30.0%
AAGGTTAATTTCCTAACACT+CGG - chr7.2:36166222-36166241 None:intergenic 30.0%
AATACAAAAGAAAAAACCGC+AGG - chr7.2:36167922-36167941 None:intergenic 30.0%
AATCTGGACAGATTCTAAAT+TGG - chr7.2:36167780-36167799 None:intergenic 30.0%
AATTGTTATCTGTTTACAGC+AGG + chr7.2:36166940-36166959 MS.gene77306:intron 30.0%
AGCAATTCAATTACTTGTCA+AGG - chr7.2:36166241-36166260 None:intergenic 30.0%
AGGAAAAAAATCTCTTGCAA+TGG + chr7.2:36169268-36169287 MS.gene77306:CDS 30.0%
ATAAAAAACAGTAAGGAGCA+GGG - chr7.2:36168988-36169007 None:intergenic 30.0%
ATGAAGCAAAGAAGAAATCA+TGG - chr7.2:36167222-36167241 None:intergenic 30.0%
ATTGTTATCTGTTTACAGCA+GGG + chr7.2:36166941-36166960 MS.gene77306:intron 30.0%
CAGCACAAAAACTGAATAAA+AGG - chr7.2:36168748-36168767 None:intergenic 30.0%
CTTATAATCATTGAGTCCAA+TGG + chr7.2:36168869-36168888 MS.gene77306:intron 30.0%
CTTCTGATCAAAAATGTGTT+TGG + chr7.2:36165553-36165572 MS.gene77306:intron 30.0%
CTTGACAAGAAAATTGGTAT+TGG + chr7.2:36168089-36168108 MS.gene77306:CDS 30.0%
GAAAAGGTGAACAAGATAAT+AGG + chr7.2:36168260-36168279 MS.gene77306:CDS 30.0%
GAAGGAGAAAATGAAAGAAA+AGG + chr7.2:36168244-36168263 MS.gene77306:CDS 30.0%
GAAGTTACTGTTACTAATGA+CGG + chr7.2:36165979-36165998 MS.gene77306:CDS 30.0%
GATCACATCCATCAATAAAT+TGG - chr7.2:36166430-36166449 None:intergenic 30.0%
GTAAAAGAACAACATTGGAA+AGG - chr7.2:36168601-36168620 None:intergenic 30.0%
GTAAACGATATTCACTGATA+AGG + chr7.2:36167494-36167513 MS.gene77306:intron 30.0%
TAATTAGATTTACTCCCTAG+TGG + chr7.2:36169604-36169623 MS.gene77306:intron 30.0%
TGACAATGAAACCAAACTAA+AGG - chr7.2:36166526-36166545 None:intergenic 30.0%
TGGATTTAGCAAATAGTGTA+TGG + chr7.2:36167189-36167208 MS.gene77306:intron 30.0%
TTACAAATATGCTATACGTC+AGG + chr7.2:36167669-36167688 MS.gene77306:intron 30.0%
TTTACCTAGAGTGATACAAA+TGG - chr7.2:36168019-36168038 None:intergenic 30.0%
TTTGATGTAATCACATGTGT+TGG - chr7.2:36165607-36165626 None:intergenic 30.0%
TTTGTACAGTCATCATTTGT+CGG + chr7.2:36165773-36165792 MS.gene77306:intron 30.0%
! CTTTTATTCAGTTTTTGTGC+TGG + chr7.2:36168746-36168765 MS.gene77306:intron 30.0%
! GAAAATTTTACCATTCCCTT+TGG - chr7.2:36165839-36165858 None:intergenic 30.0%
! TAGTTTGGTTTCATTGTCAA+CGG + chr7.2:36166527-36166546 MS.gene77306:intron 30.0%
! TATTTTCCCTTTTGGATGTT+AGG + chr7.2:36166873-36166892 MS.gene77306:intron 30.0%
! TTCTTGAGGTTTTCTTATTC+TGG + chr7.2:36168646-36168665 MS.gene77306:intron 30.0%
!! AACATGGTTATATTTTTGCC+AGG + chr7.2:36167521-36167540 MS.gene77306:intron 30.0%
!! CTGGTATTTATTTTCCCTTT+TGG + chr7.2:36166865-36166884 MS.gene77306:intron 30.0%
!! TTATGATTTCATCGACTCTA+AGG - chr7.2:36169993-36170012 None:intergenic 30.0%
!!! ATGATTTTTAGGTTTCCGAA+TGG + chr7.2:36166785-36166804 MS.gene77306:intron 30.0%
!!! ATTGCAAGAGATTTTTTTCC+TGG - chr7.2:36169269-36169288 None:intergenic 30.0%
!!! TTTTTGTGCTGGTTTATTGA+AGG + chr7.2:36168757-36168776 MS.gene77306:intron 30.0%
AAAAACTGTGGTTCAAGGAT+TGG - chr7.2:36167422-36167441 None:intergenic 35.0%
AAAACCGCAGGTTTCAAAAA+AGG - chr7.2:36167910-36167929 None:intergenic 35.0%
AAATCGCTCGTACATATACT+CGG - chr7.2:36169767-36169786 None:intergenic 35.0%
AACTACCTCTGTTGTTGTAT+TGG + chr7.2:36166095-36166114 MS.gene77306:CDS 35.0%
AAGCAGTCTAGTTAAACCAT+TGG - chr7.2:36168888-36168907 None:intergenic 35.0%
AAGCCTCTCATATTATTCAG+TGG - chr7.2:36169672-36169691 None:intergenic 35.0%
ACAGACAAGGTGAAGATATA+CGG + chr7.2:36168167-36168186 MS.gene77306:CDS 35.0%
ACTGAAAAAACTGTGGTTCA+AGG - chr7.2:36167427-36167446 None:intergenic 35.0%
AGATGCTGTAATGAGACTAA+AGG + chr7.2:36167119-36167138 MS.gene77306:CDS 35.0%
AGCCTCTCATATTATTCAGT+GGG - chr7.2:36169671-36169690 None:intergenic 35.0%
AGCTGGGTTATCAATATGAA+GGG - chr7.2:36166022-36166041 None:intergenic 35.0%
CAAGGATTGGAAGAAATTGA+AGG - chr7.2:36167409-36167428 None:intergenic 35.0%
CACATTATTAGTAGGGTAGT+CGG - chr7.2:36167158-36167177 None:intergenic 35.0%
CAGATTATAAAGAAACCAGG+AGG + chr7.2:36167794-36167813 MS.gene77306:CDS 35.0%
CATAAAAAACAGTAAGGAGC+AGG - chr7.2:36168989-36169008 None:intergenic 35.0%
CATCCAATGACTATAATAGC+AGG + chr7.2:36166165-36166184 MS.gene77306:CDS 35.0%
CATTATCAGCAATGGTTGTT+GGG - chr7.2:36169322-36169341 None:intergenic 35.0%
CGAAGCCATAAAAAACAGTA+AGG - chr7.2:36168995-36169014 None:intergenic 35.0%
CTCCTGGTTTCTTTATAATC+TGG - chr7.2:36167796-36167815 None:intergenic 35.0%
GAACCTGCTATTATAGTCAT+TGG - chr7.2:36166171-36166190 None:intergenic 35.0%
GAGTTAGGATGTGTATGATA+GGG + chr7.2:36169635-36169654 MS.gene77306:intron 35.0%
GATAAAATTCTGCAGTCAAC+GGG + chr7.2:36165946-36165965 MS.gene77306:CDS 35.0%
GCTTCCCTGTAATATGAAAA+TGG - chr7.2:36167756-36167775 None:intergenic 35.0%
GGATAAAATTCTGCAGTCAA+CGG + chr7.2:36165945-36165964 MS.gene77306:intron 35.0%
GGTAAACCTAACATCCAAAA+GGG - chr7.2:36166882-36166901 None:intergenic 35.0%
GTAATGAGACTAAAGGTGAT+TGG + chr7.2:36167126-36167145 MS.gene77306:intron 35.0%
GTCCAGATTATAAAGAAACC+AGG + chr7.2:36167791-36167810 MS.gene77306:CDS 35.0%
GTGAACAAGATAATAGGTCA+TGG + chr7.2:36168266-36168285 MS.gene77306:CDS 35.0%
TAGACTTGATGAACATTGCA+AGG + chr7.2:36167037-36167056 MS.gene77306:CDS 35.0%
TCATCTTTCAGGAAGATGAA+TGG - chr7.2:36166554-36166573 None:intergenic 35.0%
TGAACCATTTGTATCACTCT+AGG + chr7.2:36168012-36168031 MS.gene77306:intron 35.0%
TGAAGAGATTATGATTGGTG+AGG + chr7.2:36168478-36168497 MS.gene77306:CDS 35.0%
TGGTAAACCTAACATCCAAA+AGG - chr7.2:36166883-36166902 None:intergenic 35.0%
TTAGAACAAACTGTGGTTCA+AGG - chr7.2:36167586-36167605 None:intergenic 35.0%
TTGGATGTTAGGTTTACCAT+TGG + chr7.2:36166884-36166903 MS.gene77306:intron 35.0%
TTGTACAGTCATCATTTGTC+GGG + chr7.2:36165774-36165793 MS.gene77306:intron 35.0%
TTTGCATTCTCTATGCGTTT+GGG - chr7.2:36168119-36168138 None:intergenic 35.0%
! AAATCATAACTTGTGCTCCA+AGG + chr7.2:36170004-36170023 MS.gene77306:CDS 35.0%
! ATATTTGGGATGATGTTTGC+AGG + chr7.2:36165924-36165943 MS.gene77306:intron 35.0%
! ATGATAGCTAGTTTGATCCT+TGG + chr7.2:36167463-36167482 MS.gene77306:intron 35.0%
! ATGTACGAGCGATTTTACAA+AGG + chr7.2:36169772-36169791 MS.gene77306:intron 35.0%
! CTGGTCATTCATAGTGATTT+TGG + chr7.2:36169521-36169540 MS.gene77306:intron 35.0%
! GAACTTTAGAAATGTCAACG+AGG - chr7.2:36166053-36166072 None:intergenic 35.0%
! GATTTGGTTAAGACTACCTT+AGG + chr7.2:36165812-36165831 MS.gene77306:CDS 35.0%
! GTTGATTTACAATTTCCCAG+AGG + chr7.2:36168313-36168332 MS.gene77306:CDS 35.0%
! TGGATTTTGCAGAGAAATTC+AGG + chr7.2:36167013-36167032 MS.gene77306:intron 35.0%
! TTCATTTTCATGTGAGTCTG+CGG + chr7.2:36165710-36165729 MS.gene77306:intron 35.0%
!! GCATCAACTGTTTTGTTAAC+AGG + chr7.2:36168288-36168307 MS.gene77306:CDS 35.0%
!! TGTTCGCTTTGGAATTGTAT+TGG + chr7.2:36165506-36165525 MS.gene77306:intron 35.0%
!!! AAGTTTTCTGGTGTTGCAAT+GGG + chr7.2:36168512-36168531 MS.gene77306:CDS 35.0%
!!! ATTGAGCATGCTGATTTTGA+TGG + chr7.2:36168365-36168384 MS.gene77306:CDS 35.0%
!!! ATTTTTAGGTTTCCGAATGG+CGG + chr7.2:36166788-36166807 MS.gene77306:intron 35.0%
!!! CTATCCTTTTTTGAAACCTG+CGG + chr7.2:36167903-36167922 MS.gene77306:intron 35.0%
!!! CTGCTCCTTACTGTTTTTTA+TGG + chr7.2:36168987-36169006 MS.gene77306:intron 35.0%
AAACATCAGGGTAGACGATA+AGG - chr7.2:36166281-36166300 None:intergenic 40.0%
AAGAATAAAAGTGGCAGCCT+TGG - chr7.2:36166503-36166522 None:intergenic 40.0%
ACAGAAAACTGCAGTATGGA+CGG - chr7.2:36166690-36166709 None:intergenic 40.0%
ACTAGTTGCAAACACTGCAA+TGG + chr7.2:36168142-36168161 MS.gene77306:CDS 40.0%
AGGTTGGAGACATGTTTCAA+CGG + chr7.2:36169899-36169918 MS.gene77306:intron 40.0%
CAAAATTCTCTCGCAAGACA+AGG + chr7.2:36167074-36167093 MS.gene77306:CDS 40.0%
CAATCCAGCATTATCAGCAA+TGG - chr7.2:36169330-36169349 None:intergenic 40.0%
CAGCTGGGTTATCAATATGA+AGG - chr7.2:36166023-36166042 None:intergenic 40.0%
CATGACAGAAAACTGCAGTA+TGG - chr7.2:36166694-36166713 None:intergenic 40.0%
CTTTGCATTCTCTATGCGTT+TGG - chr7.2:36168120-36168139 None:intergenic 40.0%
CTTTGCTGATGCAGGAATAT+TGG + chr7.2:36168340-36168359 MS.gene77306:CDS 40.0%
GAAATATTAGCTATGACGCG+TGG - chr7.2:36165682-36165701 None:intergenic 40.0%
GATGAAGCAAGTGAAGAGAA+AGG + chr7.2:36165430-36165449 MS.gene77306:CDS 40.0%
GATGTGTATGATAGGGACTT+TGG + chr7.2:36169642-36169661 MS.gene77306:intron 40.0%
GCATTATCAGCAATGGTTGT+TGG - chr7.2:36169323-36169342 None:intergenic 40.0%
GCATTTGAGCTGGATATGTA+TGG + chr7.2:36169021-36169040 MS.gene77306:intron 40.0%
GCTAAAGTTGCTGAGATTGA+AGG + chr7.2:36168215-36168234 MS.gene77306:CDS 40.0%
GGAGTTAGGATGTGTATGAT+AGG + chr7.2:36169634-36169653 MS.gene77306:intron 40.0%
GGCAAAGGAAATTGATGCAT+TGG + chr7.2:36169232-36169251 MS.gene77306:CDS 40.0%
GTCCCACTGAATAATATGAG+AGG + chr7.2:36169666-36169685 MS.gene77306:intron 40.0%
GTGACTTGATTCTTTACCCT+TGG + chr7.2:36169706-36169725 MS.gene77306:intron 40.0%
TAACTCCACTGTATCCACTA+GGG - chr7.2:36169621-36169640 None:intergenic 40.0%
TCACTGATAAGGGTTGAACA+TGG + chr7.2:36167505-36167524 MS.gene77306:intron 40.0%
TCAGACTGTCAATGATAGCA+GGG + chr7.2:36169175-36169194 MS.gene77306:CDS 40.0%
TCATTGTGATGTGTTCGCTT+TGG + chr7.2:36165495-36165514 MS.gene77306:intron 40.0%
TCCTTTGCCATTACCATTTC+AGG - chr7.2:36169221-36169240 None:intergenic 40.0%
TCTCAAAAACTAGTCGCCAA+GGG - chr7.2:36169725-36169744 None:intergenic 40.0%
TGATTCACATTCCGAGTGTT+AGG + chr7.2:36166208-36166227 MS.gene77306:intron 40.0%
TGTACAGTCATCATTTGTCG+GGG + chr7.2:36165775-36165794 MS.gene77306:intron 40.0%
TGTATTGCTATCTGCAACAG+AGG + chr7.2:36169954-36169973 MS.gene77306:CDS 40.0%
TTCGATCAATGCATTTGAGC+TGG + chr7.2:36169011-36169030 MS.gene77306:intron 40.0%
TTCTCAAAAACTAGTCGCCA+AGG - chr7.2:36169726-36169745 None:intergenic 40.0%
TTTAAGGGAGGCAGAAAAGT+TGG + chr7.2:36166128-36166147 MS.gene77306:CDS 40.0%
! AACCTACGAGAAGTACACAT+CGG - chr7.2:36169884-36169903 None:intergenic 40.0%
! ACAACCATTGCTGATAATGC+TGG + chr7.2:36169323-36169342 MS.gene77306:CDS 40.0%
! ATCGTTTACAAAGCACTCCA+AGG - chr7.2:36167483-36167502 None:intergenic 40.0%
! CATTGCTGATAATGCTGGAT+TGG + chr7.2:36169328-36169347 MS.gene77306:CDS 40.0%
! CTGCAGTTTTCTGTCATGTT+TGG + chr7.2:36166696-36166715 MS.gene77306:intron 40.0%
! CTTGTCTTGCGAGAGAATTT+TGG - chr7.2:36167076-36167095 None:intergenic 40.0%
! TCGTAATGCATTGGTAGAGA+AGG + chr7.2:36166821-36166840 MS.gene77306:CDS 40.0%
! TGAAGCATTCAAAGTCAAGC+AGG + chr7.2:36169930-36169949 MS.gene77306:CDS 40.0%
!! AATGATAGCAGGGTGTTACT+TGG + chr7.2:36169185-36169204 MS.gene77306:CDS 40.0%
!! TTTTGATGGTATTGAGCGTC+TGG + chr7.2:36168379-36168398 MS.gene77306:CDS 40.0%
!!! AAGCCTGACATCTGTTTTTG+TGG + chr7.2:36169092-36169111 MS.gene77306:intron 40.0%
!!! AGTTTTCTGGTGTTGCAATG+GGG + chr7.2:36168513-36168532 MS.gene77306:CDS 40.0%
!!! CAAGTTTTCTGGTGTTGCAA+TGG + chr7.2:36168511-36168530 MS.gene77306:CDS 40.0%
AACAGACTCAGGGTTGTCAA+AGG - chr7.2:36168435-36168454 None:intergenic 45.0%
AACCCTGAGTCTGTTAAGCT+TGG + chr7.2:36168440-36168459 MS.gene77306:CDS 45.0%
AAGACTACCTTAGGCCCAAA+GGG + chr7.2:36165821-36165840 MS.gene77306:CDS 45.0%
AAGTGAAGAGAAAGGAGAGC+GGG + chr7.2:36165438-36165457 MS.gene77306:CDS 45.0%
ACCCTGAGTCTGTTAAGCTT+GGG + chr7.2:36168441-36168460 MS.gene77306:CDS 45.0%
ATTCTGTCTTCTCTCCTCCT+TGG - chr7.2:36170024-36170043 None:intergenic 45.0%
ATTGCTATCTGCAACAGAGG+CGG + chr7.2:36169957-36169976 MS.gene77306:CDS 45.0%
CAAGATGATGAAGTTGGCGA+TGG + chr7.2:36166072-36166091 MS.gene77306:CDS 45.0%
CAAGTGAAGAGAAAGGAGAG+CGG + chr7.2:36165437-36165456 MS.gene77306:CDS 45.0%
CTAACTCCACTGTATCCACT+AGG - chr7.2:36169622-36169641 None:intergenic 45.0%
CTCAGACTGTCAATGATAGC+AGG + chr7.2:36169174-36169193 MS.gene77306:CDS 45.0%
CTGCCACAAAAACAGATGTC+AGG - chr7.2:36169098-36169117 None:intergenic 45.0%
GATGTGTACTTCTCGTAGGT+TGG + chr7.2:36169883-36169902 MS.gene77306:intron 45.0%
GCTGGAATTGATGTCATCTC+TGG + chr7.2:36169407-36169426 MS.gene77306:CDS 45.0%
GGTTGGAGACATGTTTCAAC+GGG + chr7.2:36169900-36169919 MS.gene77306:intron 45.0%
GTAAGGAGCAGGGCAATAAA+AGG - chr7.2:36168978-36168997 None:intergenic 45.0%
GTGGACAACAAAGAAGATGC+TGG + chr7.2:36166846-36166865 MS.gene77306:CDS 45.0%
GTTGGAGACATGTTTCAACG+GGG + chr7.2:36169901-36169920 MS.gene77306:CDS 45.0%
TAAGACTACCTTAGGCCCAA+AGG + chr7.2:36165820-36165839 MS.gene77306:CDS 45.0%
TCTGATCACTGCATTCACTC+TGG + chr7.2:36169502-36169521 MS.gene77306:intron 45.0%
TGAGATTGAAGGAGCTGAGA+AGG + chr7.2:36168226-36168245 MS.gene77306:CDS 45.0%
TGAGTGTGCTCGTAATGCAT+TGG + chr7.2:36166812-36166831 MS.gene77306:CDS 45.0%
TTCAAAGGCTACAGAGCCAA+TGG - chr7.2:36166903-36166922 None:intergenic 45.0%
! ACCTCTGTTGTTGTATTGGC+TGG + chr7.2:36166099-36166118 MS.gene77306:CDS 45.0%
! ATTGGCTGGGGAGCTTTTAA+GGG + chr7.2:36166113-36166132 MS.gene77306:CDS 45.0%
! CTAGTGGATACAGTGGAGTT+AGG + chr7.2:36169620-36169639 MS.gene77306:intron 45.0%
! GGCTATGGCTATTGCTGATT+TGG + chr7.2:36165796-36165815 MS.gene77306:CDS 45.0%
! TCATAACTTGTGCTCCAAGG+AGG + chr7.2:36170007-36170026 MS.gene77306:CDS 45.0%
! TGCATTGGTAGAGAAGGTTG+TGG + chr7.2:36166827-36166846 MS.gene77306:CDS 45.0%
! TTACTCCCTAGTGGATACAG+TGG + chr7.2:36169613-36169632 MS.gene77306:intron 45.0%
!! CAATAGTTCTGAGAGGTGCT+AGG + chr7.2:36168546-36168565 MS.gene77306:CDS 45.0%
!! CCTCTGTTGTTGTATTGGCT+GGG + chr7.2:36166100-36166119 MS.gene77306:CDS 45.0%
!! CTCTGTTGTTGTATTGGCTG+GGG + chr7.2:36166101-36166120 MS.gene77306:CDS 45.0%
!! GCATGCACAATAGTTCTGAG+AGG + chr7.2:36168539-36168558 MS.gene77306:CDS 45.0%
!! GCCTGAAATGGTAATGGCAA+AGG + chr7.2:36169217-36169236 MS.gene77306:CDS 45.0%
!! TATTGGCTGGGGAGCTTTTA+AGG + chr7.2:36166112-36166131 MS.gene77306:CDS 45.0%
!!! TTGCAATGGAGGCATTTTCC+CGG + chr7.2:36169282-36169301 MS.gene77306:CDS 45.0%
!!! TTAAAGTTTTTTTTTTTTTA+AGG - chr7.2:36168813-36168832 None:intergenic 5.0%
AAACTGCAGTATGGACGGAG+TGG - chr7.2:36166685-36166704 None:intergenic 50.0%
AACTGCAGTATGGACGGAGT+GGG - chr7.2:36166684-36166703 None:intergenic 50.0%
ATGACCTCTCAGCCTCATCA+AGG - chr7.2:36169130-36169149 None:intergenic 50.0%
ATGTCCTTGATGAGGCTGAG+AGG + chr7.2:36169123-36169142 MS.gene77306:CDS 50.0%
ATTCTGCAGTCAACGGGTAG+AGG + chr7.2:36165952-36165971 MS.gene77306:CDS 50.0%
CAACGAGGACTTTAGCAGCT+GGG - chr7.2:36166038-36166057 None:intergenic 50.0%
CACTGCAATGGACACAGACA+AGG + chr7.2:36168154-36168173 MS.gene77306:CDS 50.0%
CATAGAGTCGACACGAACAC+GGG - chr7.2:36168195-36168214 None:intergenic 50.0%
CATCAGCAAAGAGCTCCTCT+GGG - chr7.2:36168331-36168350 None:intergenic 50.0%
CATGTGAGTCTGCGGAAAGT+TGG + chr7.2:36165718-36165737 MS.gene77306:intron 50.0%
CCATAGAGTCGACACGAACA+CGG - chr7.2:36168196-36168215 None:intergenic 50.0%
CCCAGCCAATACAACAACAG+AGG - chr7.2:36166103-36166122 None:intergenic 50.0%
GACCGATGTGTACTTCTCGT+AGG + chr7.2:36169879-36169898 MS.gene77306:intron 50.0%
GAGTCTATCAGTGATCCTCC+TGG - chr7.2:36167812-36167831 None:intergenic 50.0%
GCCCAAGCTTAACAGACTCA+GGG - chr7.2:36168445-36168464 None:intergenic 50.0%
GTCATCATTTGTCGGGGCTA+TGG + chr7.2:36165781-36165800 MS.gene77306:intron 50.0%
TACCATTCCCTTTGGGCCTA+AGG - chr7.2:36165831-36165850 None:intergenic 50.0%
TACCTTAGGCCCAAAGGGAA+TGG + chr7.2:36165826-36165845 MS.gene77306:CDS 50.0%
TCAACGAGGACTTTAGCAGC+TGG - chr7.2:36166039-36166058 None:intergenic 50.0%
TCTCAGCCTCATCAAGGACA+TGG - chr7.2:36169124-36169143 None:intergenic 50.0%
TGCCCAAGCTTAACAGACTC+AGG - chr7.2:36168446-36168465 None:intergenic 50.0%
TTCTGCAGTCAACGGGTAGA+GGG + chr7.2:36165953-36165972 MS.gene77306:CDS 50.0%
! AAGGAAGCATGCTGAGCTAG+CGG - chr7.2:36169831-36169850 None:intergenic 50.0%
!! GATAGCAGGGTGTTACTTGG+AGG + chr7.2:36169188-36169207 MS.gene77306:CDS 50.0%
!! GCATTGGCTAGAAAGACTCC+AGG + chr7.2:36169248-36169267 MS.gene77306:CDS 50.0%
!!! TGCAATGGAGGCATTTTCCC+GGG + chr7.2:36169283-36169302 MS.gene77306:CDS 50.0%
CAGAACGAGGGATGTACTGC+TGG + chr7.2:36169389-36169408 MS.gene77306:CDS 55.0%
CAGCAGTACATCCCTCGTTC+TGG - chr7.2:36169391-36169410 None:intergenic 55.0%
CAGCCACCATGTCCTTGATG+AGG + chr7.2:36169115-36169134 MS.gene77306:intron 55.0%
CAGCCTCATCAAGGACATGG+TGG - chr7.2:36169121-36169140 None:intergenic 55.0%
CGGGTGGCCTGAAATGGTAA+TGG + chr7.2:36169211-36169230 MS.gene77306:CDS 55.0%
GAGGAGCTCTTTGCTGATGC+AGG + chr7.2:36168332-36168351 MS.gene77306:CDS 55.0%
GCATCAGCAAAGAGCTCCTC+TGG - chr7.2:36168332-36168351 None:intergenic 55.0%
! TGGTATTGAGCGTCTGGCTC+TGG + chr7.2:36168385-36168404 MS.gene77306:CDS 55.0%
!! AGCAGGGTGTTACTTGGAGG+CGG + chr7.2:36169191-36169210 MS.gene77306:CDS 55.0%
!! CCGTGTTCGTGTCGACTCTA+TGG + chr7.2:36168193-36168212 MS.gene77306:CDS 55.0%
!! TTCTGGTGTTGCAATGGGGC+AGG + chr7.2:36168517-36168536 MS.gene77306:CDS 55.0%
CCTCGTTCTGGTGCTCAGCA+CGG - chr7.2:36169379-36169398 None:intergenic 60.0%
CGTGCTGAGCACCAGAACGA+GGG + chr7.2:36169377-36169396 MS.gene77306:CDS 60.0%
GAAAGGAGAGCGGGCGAGAA+TGG + chr7.2:36165447-36165466 MS.gene77306:CDS 60.0%
GAGCACACTCAGCCGCCATT+CGG - chr7.2:36166803-36166822 None:intergenic 60.0%
!! CGTCTGGCTCTGGTAACTGG+TGG + chr7.2:36168395-36168414 MS.gene77306:CDS 60.0%
!! GAGCGTCTGGCTCTGGTAAC+TGG + chr7.2:36168392-36168411 MS.gene77306:CDS 60.0%
!! GCAGGGTGTTACTTGGAGGC+GGG + chr7.2:36169192-36169211 MS.gene77306:CDS 60.0%
!! GGCTGGGGAGCTTTTAAGGG+AGG + chr7.2:36166116-36166135 MS.gene77306:CDS 60.0%
CCGTGCTGAGCACCAGAACG+AGG + chr7.2:36169376-36169395 MS.gene77306:CDS 65.0%
TGGAGGCGGGTGGCCTGAAA+TGG + chr7.2:36169205-36169224 MS.gene77306:CDS 65.0%
!! GGGTGTTACTTGGAGGCGGG+TGG + chr7.2:36169195-36169214 MS.gene77306:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 36165308 36170047 36165308 ID=MS.gene77306
chr7.2 mRNA 36165308 36170047 36165308 ID=MS.gene77306.t1;Parent=MS.gene77306
chr7.2 exon 36165308 36165313 36165308 ID=MS.gene77306.t1.exon1;Parent=MS.gene77306.t1
chr7.2 CDS 36165308 36165313 36165308 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36165412 36165468 36165412 ID=MS.gene77306.t1.exon2;Parent=MS.gene77306.t1
chr7.2 CDS 36165412 36165468 36165412 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36165782 36165847 36165782 ID=MS.gene77306.t1.exon3;Parent=MS.gene77306.t1
chr7.2 CDS 36165782 36165847 36165782 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36165946 36166186 36165946 ID=MS.gene77306.t1.exon4;Parent=MS.gene77306.t1
chr7.2 CDS 36165946 36166186 36165946 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36166796 36166867 36166796 ID=MS.gene77306.t1.exon5;Parent=MS.gene77306.t1
chr7.2 CDS 36166796 36166867 36166796 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36167025 36167140 36167025 ID=MS.gene77306.t1.exon6;Parent=MS.gene77306.t1
chr7.2 CDS 36167025 36167140 36167025 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36167770 36167846 36167770 ID=MS.gene77306.t1.exon7;Parent=MS.gene77306.t1
chr7.2 CDS 36167770 36167846 36167770 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36168082 36168567 36168082 ID=MS.gene77306.t1.exon8;Parent=MS.gene77306.t1
chr7.2 CDS 36168082 36168567 36168082 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36169118 36169433 36169118 ID=MS.gene77306.t1.exon9;Parent=MS.gene77306.t1
chr7.2 CDS 36169118 36169433 36169118 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
chr7.2 exon 36169901 36170047 36169901 ID=MS.gene77306.t1.exon10;Parent=MS.gene77306.t1
chr7.2 CDS 36169901 36170047 36169901 ID=cds.MS.gene77306.t1;Parent=MS.gene77306.t1
Gene Sequence

>MS.gene77306

ATGGCGGTAAGTTACTTGCTTGCTACTAATCTTGTTATTTTGTTTCCTTATTTAATTTTTTTTAATATATATTTGGAAATTTATTGTGCTGTGAATGCTTACAGATTGATAGAATTTTTAAAGATGAAGCAAGTGAAGAGAAAGGAGAGCGGGCGAGAATGGTGAGTGTGAAAATGTGTTATTGATTTCATTGTGATGTGTTCGCTTTGGAATTGTATTGGCTAAAATTCACTGTAGCACTGACACTTCTGATCAAAAATGTGTTTGGTGTCTGACACTTACTCAAAGAGTCAACACCAACACATGTGATTACATCAAATTATCTCATTTTCACAAATTGTTATGTGTTAGTGTTCGTTTTGTTTCTGTGTCCACGCGTCATAGCTAATATTTCAATGCATTTTCATTTTCATGTGAGTCTGCGGAAAGTTGGTTAACTCTAACTAATTGTGTTTATGAATTGGTTTTGTACAGTCATCATTTGTCGGGGCTATGGCTATTGCTGATTTGGTTAAGACTACCTTAGGCCCAAAGGGAATGGTAAAATTTTCTCTTCAGTAATGAAATGTCGTGCTATACGATTTTATTTTCTGCTACCAAGAACTAAGTAATTCACATATTTGGGATGATGTTTGCAGGATAAAATTCTGCAGTCAACGGGTAGAGGGCGTGAAGTTACTGTTACTAATGACGGTGCTACAATCTTGAAGTCCCTTCATATTGATAACCCAGCTGCTAAAGTCCTCGTTGACATTTCTAAAGTTCAAGATGATGAAGTTGGCGATGGAACTACCTCTGTTGTTGTATTGGCTGGGGAGCTTTTAAGGGAGGCAGAAAAGTTGGTTGCAGCTAAAATTCATCCAATGACTATAATAGCAGGTTCGTTTCTTTTCTTTTCATTGATTCACATTCCGAGTGTTAGGAAATTAACCTTGACAAGTAATTGAATTGCTGTTGAAAGCTACATTTTCCTTATCGTCTACCCTGATGTTTTATGCATATTGTACATAAGATCTTTCTTTGGTACGCAACAACTTTGATGCTACTTTGAAGTAAATAAATCTAAAATGTTTATAGTCTCTAAATTTAGTTGTTCCATCTTTGTAATTAAATTAAGGACCAATTTATTGATGGATGTGATCTAATGTAACAGTATCAGTCAATGAAAATCTTTCATTTCAGTTTTTTCTTTCCAAGGCTGCCACTTTTATTCTTCCTTTAGTTTGGTTTCATTGTCAACGGACCATTCATCTTCCTGAAAGATGAGTAAAAAGTAAAAATTGTGGGAAGCATCAGAAACATAAAGCATCAAAGTTTGATAATGGTGCTTTAAAAGTCCTTTATAATTCTGATAAACTTTGCATGATTGTTGTCCCACTCCGTCCATACTGCAGTTTTCTGTCATGTTTGGTTTCAAATGATTTTCTTTCAAATGATGCATATGTGTTTAATATCAATATATTTGACATTATCGGATATGATTTTTAGGTTTCCGAATGGCGGCTGAGTGTGCTCGTAATGCATTGGTAGAGAAGGTTGTGGACAACAAAGAAGATGCTGGTATTTATTTTCCCTTTTGGATGTTAGGTTTACCATTGGCTCTGTAGCCTTTGAATTTATCGTTATCATTAGAATTGTTATCTGTTTACAGCAGGGTCAGATACAAAAGCTTTCTCTTGTCATAATATCTTATACATAAATTTTCTGGATTTTGCAGAGAAATTCAGGTTAGACTTGATGAACATTGCAAGGACTACTTTGAGCTCCAAAATTCTCTCGCAAGACAAGGAGCATTTCGCAAAATTAGCTGTAGATGCTGTAATGAGACTAAAGGTGATTGGTGACTACCGACTACCCTACTAATAATGTGTCCAATTTTGATGGATTTAGCAAATAGTGTATGGACTGTTGCCATGATTTCTTCTTTGCTTCATATCTGCAAAAACTCTAGTTTATAAAAATTTGATACGATTTTGATCTATATACTTTTCTGCATGATTGGCTAAATACTTAAAAGTGTGTTTTATTTAGAAATCTGGTTACAATTCTTTTATATGATCCTACAATTTATAATCCATTCTTATAATATGTACATAGCCCTTCAATTTCTTCCAATCCTTGAACCACAGTTTTTTCAGTTTTCTAATATAATTTCATGATAGCTAGTTTGATCCTTGGAGTGCTTTGTAAACGATATTCACTGATAAGGGTTGAACATGGTTATATTTTTGCCAGGTTATAAGAGTATTTCATTTGTGATAATGTTTTCTATTATCCTTGAACCACAGTTTGTTCTAATGTTCTTAAAAGCACAGAATGTTTGCAGTTTAATTGTCTTTTTAGTTATGCAGTATTTTGTTCTTACAAATATGCTATACGTCAGGATTTTTATTTTTTTTATAGTGATCTCTATTGTCATAAAATTAACTATTAAACTTTTCATTTCCATTTTCATATTACAGGGAAGCACCAATTTAGAATCTGTCCAGATTATAAAGAAACCAGGAGGATCACTGATAGACTCATTTTTAGATGAAGGGTAATATTACTGAAAATTTGGAATATTTTTTTAGTCGAGTATCAAATGCTTCTATTCTATCCTTTTTTGAAACCTGCGGTTTTTTCTTTTGTATTGAGTTGCATACGTAGTCTTCAAGTACCTTGACTGAATTCAAAATATTGCCAACTTAACTATCCTGTATAATGAACCATTTGTATCACTCTAGGTAAAAAATAGTATTTCTGTTTCTAAATTGGATTATATTTTTGTTTAGATTTATTCTTGACAAGAAAATTGGTATTGGACAACCCAAACGCATAGAGAATGCAAAGATACTAGTTGCAAACACTGCAATGGACACAGACAAGGTGAAGATATACGGAGCCCGTGTTCGTGTCGACTCTATGGCTAAAGTTGCTGAGATTGAAGGAGCTGAGAAGGAGAAAATGAAAGAAAAGGTGAACAAGATAATAGGTCATGGCATCAACTGTTTTGTTAACAGGCAGTTGATTTACAATTTCCCAGAGGAGCTCTTTGCTGATGCAGGAATATTGGCTATTGAGCATGCTGATTTTGATGGTATTGAGCGTCTGGCTCTGGTAACTGGTGGTGAAATTGCTTCAACCTTTGACAACCCTGAGTCTGTTAAGCTTGGGCAATGTGAGCTTATTGAAGAGATTATGATTGGTGAGGATAAATTGATCAAGTTTTCTGGTGTTGCAATGGGGCAGGCATGCACAATAGTTCTGAGAGGTGCTAGGTACGTTTCCTTTTTTTGTCATTGTAAATTCCTTTCCAATGTTGTTCTTTTACATATTCAGGGATTTTTTTTCTTGAATTCTTGAGGTTTTCTTATTCTGGCAGTATTTGATTGCAGTATTTCACTGTCTATTCACAGTTGATCAGTGTTTGATATGAATTGCGTAGTACAAATGACCCTTTTATTCAGTTTTTGTGCTGGTTTATTGAAGGTTAATGTAAAGGATTCTAACTTATTATTTTCCTTAAAAAAAAAAAAACTTTAATTTTGTTTTTTTTTTTAAATAATTCATAAATTTTCGCTTATAATCATTGAGTCCAATGGTTTAACTAGACTGCTTAAATTGTGAACATTAATTGCTTTTATGCACACATGTTCTTGTGTTATCATACAAAGTTTGTTTATGTCCTTTTATTGCCCTGCTCCTTACTGTTTTTTATGGCTTCGATCAATGCATTTGAGCTGGATATGTATGGTACTTTTTGTATGCATGAGTAGACAATTTTTTTTAACAAATTTGAGTTAAGCCTGACATCTGTTTTTGTGGCAGCCACCATGTCCTTGATGAGGCTGAGAGGTCATTGCATGATGCTTTGTGTGTGCTATCTCAGACTGTCAATGATAGCAGGGTGTTACTTGGAGGCGGGTGGCCTGAAATGGTAATGGCAAAGGAAATTGATGCATTGGCTAGAAAGACTCCAGGAAAAAAATCTCTTGCAATGGAGGCATTTTCCCGGGCACTCTTGGCTATCCCAACAACCATTGCTGATAATGCTGGATTGGACAGTGCTGAGTTGATTTCTCAGCTCCGTGCTGAGCACCAGAACGAGGGATGTACTGCTGGAATTGATGTCATCTCTGGTTCTGTAAGTACAATTCTGAGAATTGCAGTGATATATCATTCTATAATCTTTTTCTTGGCAGTAGATCTGTTTCTGATCACTGCATTCACTCTGGTCATTCATAGTGATTTTGGTATAAAACATGTCTCATTGAAATTTAAATAAGTTTGTATTTATTTCATGCAGTCATTTCTTAATTAGATTTACTCCCTAGTGGATACAGTGGAGTTAGGATGTGTATGATAGGGACTTTGGCGTCCCACTGAATAATATGAGAGGCTTAGTGAAGTACTCAAGTGACTTGATTCTTTACCCTTGGCGACTAGTTTTTGAGAAGTTTTTATCATTTATTAACCGAGTATATGTACGAGCGATTTTACAAAGGTTTATGTCGTATTTTAGAAAAATATCATGTAGGCCGCTAGCTCAGCATGCTTCCTTTCTATTTTCTTTTTGGCTAGTATACTTTGACCGATGTGTACTTCTCGTAGGTTGGAGACATGTTTCAACGGGGCATTTGTGAAGCATTCAAAGTCAAGCAGGCTGTATTGCTATCTGCAACAGAGGCGGCTGAGATGATCCTTAGAGTCGATGAAATCATAACTTGTGCTCCAAGGAGGAGAGAAGACAGAATGTAA
Protein sequence

>MS.gene77306.t1

MAIDRIFKDEASEEKGERARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIIAGFRMAAECARNALVEKVVDNKEDAEKFRLDLMNIARTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESVQIIKKPGGSLIDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEGAEKEKMKEKVNKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEIDALARKTPGKKSLAMEAFSRALLAIPTTIADNAGLDSAELISQLRAEHQNEGCTAGIDVISGSVGDMFQRGICEAFKVKQAVLLSATEAAEMILRVDEIITCAPRRREDRM