Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01425.t1 | XP_003593572.2 | 99.1 | 555 | 5 | 0 | 1 | 555 | 1 | 555 | 0.00E+00 | 1080.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01425.t1 | Q84WV1 | 89.5 | 555 | 58 | 0 | 1 | 555 | 1 | 555 | 1.4e-290 | 999.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01425.t1 | G7IPS8 | 99.1 | 555 | 5 | 0 | 1 | 555 | 1 | 555 | 0.0e+00 | 1080.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01425.t1 | MTR_2g013540 | 99.099 | 555 | 5 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1125 |
MS.gene01425.t1 | MTR_2g013540 | 99.261 | 406 | 3 | 0 | 150 | 555 | 1 | 406 | 0.0 | 829 |
MS.gene01425.t1 | MTR_5g087560 | 32.163 | 541 | 350 | 5 | 1 | 533 | 5 | 536 | 1.88e-94 | 299 |
MS.gene01425.t1 | MTR_3g086330 | 33.461 | 523 | 332 | 9 | 9 | 524 | 18 | 531 | 2.90e-89 | 285 |
MS.gene01425.t1 | MTR_8g088270 | 30.697 | 531 | 347 | 8 | 13 | 527 | 13 | 538 | 1.42e-71 | 239 |
MS.gene01425.t1 | MTR_3g109925 | 30.528 | 511 | 344 | 7 | 20 | 524 | 25 | 530 | 2.79e-71 | 238 |
MS.gene01425.t1 | MTR_1g030650 | 29.063 | 523 | 345 | 12 | 24 | 538 | 29 | 533 | 1.16e-67 | 228 |
MS.gene01425.t1 | MTR_6g032870 | 28.755 | 546 | 361 | 12 | 1 | 538 | 5 | 530 | 4.45e-66 | 224 |
MS.gene01425.t1 | MTR_7g406870 | 26.966 | 534 | 348 | 10 | 22 | 532 | 20 | 534 | 7.37e-66 | 223 |
MS.gene01425.t1 | MTR_7g113470 | 29.848 | 526 | 347 | 11 | 7 | 524 | 6 | 517 | 2.76e-63 | 216 |
MS.gene01425.t1 | MTR_7g067470 | 29.167 | 528 | 348 | 10 | 7 | 524 | 6 | 517 | 1.29e-61 | 212 |
MS.gene01425.t1 | MTR_7g406870 | 24.318 | 440 | 291 | 10 | 116 | 532 | 2 | 422 | 5.23e-38 | 145 |
MS.gene01425.t1 | MTR_3g109925 | 31.061 | 264 | 174 | 4 | 267 | 524 | 212 | 473 | 1.22e-26 | 113 |
MS.gene01425.t1 | MTR_3g109925 | 36.301 | 146 | 93 | 0 | 20 | 165 | 25 | 170 | 1.30e-25 | 110 |
MS.gene01425.t1 | MTR_8g105970 | 27.451 | 306 | 179 | 9 | 192 | 485 | 75 | 349 | 8.20e-19 | 88.6 |
MS.gene01425.t1 | MTR_4g124590 | 29.130 | 230 | 140 | 5 | 168 | 384 | 406 | 625 | 1.27e-17 | 87.4 |
MS.gene01425.t1 | MTR_4g085090 | 25.769 | 260 | 170 | 6 | 168 | 414 | 409 | 658 | 2.90e-16 | 83.2 |
MS.gene01425.t1 | MTR_8g023080 | 27.854 | 219 | 134 | 6 | 228 | 430 | 465 | 675 | 4.71e-13 | 72.8 |
MS.gene01425.t1 | MTR_8g023080 | 27.854 | 219 | 134 | 6 | 228 | 430 | 473 | 683 | 5.09e-13 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01425.t1 | AT5G26360 | 89.550 | 555 | 58 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1017 |
MS.gene01425.t1 | AT3G11830 | 33.457 | 541 | 343 | 5 | 1 | 533 | 5 | 536 | 6.84e-95 | 300 |
MS.gene01425.t1 | AT3G11830 | 33.272 | 541 | 342 | 6 | 1 | 533 | 5 | 534 | 3.08e-92 | 293 |
MS.gene01425.t1 | AT1G24510 | 34.549 | 521 | 329 | 8 | 9 | 524 | 18 | 531 | 1.45e-90 | 288 |
MS.gene01425.t1 | AT3G18190 | 31.418 | 522 | 342 | 9 | 10 | 524 | 22 | 534 | 1.96e-77 | 254 |
MS.gene01425.t1 | AT1G24510 | 32.787 | 488 | 311 | 9 | 42 | 524 | 3 | 478 | 2.96e-76 | 249 |
MS.gene01425.t1 | AT1G24510 | 32.900 | 462 | 298 | 8 | 68 | 524 | 1 | 455 | 2.60e-72 | 238 |
MS.gene01425.t1 | AT3G20050 | 30.114 | 528 | 352 | 6 | 14 | 527 | 14 | 538 | 3.75e-71 | 238 |
MS.gene01425.t1 | AT3G03960 | 27.778 | 522 | 353 | 11 | 24 | 538 | 32 | 536 | 6.66e-65 | 221 |
MS.gene01425.t1 | AT5G20890 | 29.356 | 528 | 347 | 10 | 7 | 524 | 6 | 517 | 7.18e-62 | 213 |
MS.gene01425.t1 | AT5G16070 | 25.497 | 553 | 371 | 8 | 4 | 534 | 2 | 535 | 7.77e-60 | 207 |
MS.gene01425.t1 | AT3G02530 | 25.362 | 552 | 370 | 8 | 4 | 532 | 2 | 534 | 1.67e-59 | 206 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 396 | 666 | 1.53e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 398 | 668 | 1.53e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 399 | 669 | 1.57e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 399 | 669 | 1.57e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 399 | 669 | 1.57e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 399 | 669 | 1.63e-20 | 96.7 |
MS.gene01425.t1 | AT4G33240 | 27.046 | 281 | 176 | 6 | 168 | 429 | 399 | 669 | 1.74e-20 | 96.7 |
MS.gene01425.t1 | AT3G14270 | 26.335 | 281 | 179 | 7 | 168 | 430 | 411 | 681 | 2.17e-17 | 86.7 |
MS.gene01425.t1 | AT3G14270 | 26.335 | 281 | 179 | 7 | 168 | 430 | 411 | 681 | 2.17e-17 | 86.7 |
MS.gene01425.t1 | AT1G71010 | 23.954 | 263 | 177 | 5 | 165 | 414 | 352 | 604 | 1.98e-16 | 83.6 |
Find 131 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCAAATTCACAAGTCAATT+TGG | 0.107359 | 2.2:-69106771 | MS.gene01425:CDS |
CCCAAATTGACTTGTGAATT+TGG | 0.111350 | 2.2:+69106770 | None:intergenic |
AAGCTTGTACTGTATTATTA+AGG | 0.193579 | 2.2:-69104872 | MS.gene01425:CDS |
TTATTTGAAGTTAAGAAAAT+TGG | 0.228729 | 2.2:-69104936 | MS.gene01425:CDS |
CCACCTCCAGGAACAAGTTT+TGG | 0.245793 | 2.2:+69104689 | None:intergenic |
AGTTTGTGCCTTCACATTAT+AGG | 0.249274 | 2.2:+69103949 | None:intergenic |
TTGCCCTCTTGAGTATAAAA+AGG | 0.258332 | 2.2:-69105255 | MS.gene01425:CDS |
AAGCTGCATGCATGCTTCTA+AGG | 0.263661 | 2.2:-69103910 | MS.gene01425:CDS |
GGCTTTGAAGGGCCTGCTCC+AGG | 0.267217 | 2.2:+69103848 | None:intergenic |
CCAAATTCACAAGTCAATTT+GGG | 0.281512 | 2.2:-69106770 | MS.gene01425:CDS |
TCTGATGTCGGTACTGGTGC+TGG | 0.297029 | 2.2:-69104960 | MS.gene01425:CDS |
AAGATGCTTCTTGATGCTTC+TGG | 0.319424 | 2.2:-69108526 | MS.gene01425:CDS |
AGAGAAGGGTCTTAGTGATT+TGG | 0.323297 | 2.2:-69105105 | MS.gene01425:CDS |
ATCTCCGACTTCTTCGTCTT+GGG | 0.330557 | 2.2:+69107707 | None:intergenic |
CTCCATGCTTGCTCAGATAA+TGG | 0.339131 | 2.2:+69105078 | None:intergenic |
CATCTCCGACTTCTTCGTCT+TGG | 0.342454 | 2.2:+69107706 | None:intergenic |
GAATCCTCAAGCTGCGCGCC+AGG | 0.348343 | 2.2:+69105371 | None:intergenic |
CACCGCATGCCTTGGCAATT+CGG | 0.351778 | 2.2:+69105018 | None:intergenic |
GTCTCAATCTTAGGCTTTGA+AGG | 0.361612 | 2.2:+69103836 | None:intergenic |
GACTCTTTGAAACGTGAGTC+TGG | 0.365350 | 2.2:-69108738 | MS.gene01425:CDS |
ACAACAGTGGGTGTTGATAT+TGG | 0.375171 | 2.2:-69105446 | MS.gene01425:CDS |
AATAATACAGTACAAGCTTT+GGG | 0.376013 | 2.2:+69104876 | None:intergenic |
ACCACATCTGTCATCATTCT+TGG | 0.376651 | 2.2:-69107681 | MS.gene01425:intron |
TAATAATACAGTACAAGCTT+TGG | 0.380733 | 2.2:+69104875 | None:intergenic |
GCTTTGAAGGGCCTGCTCCA+GGG | 0.381395 | 2.2:+69103849 | None:intergenic |
ATCTTTCTCCTCATCTTGCC+AGG | 0.386648 | 2.2:+69105305 | None:intergenic |
AAGAAGCAGGCCCCTGGAGC+AGG | 0.394021 | 2.2:-69103860 | MS.gene01425:CDS |
TCTCCCTCGGTCTCAATCTT+AGG | 0.395252 | 2.2:+69103827 | None:intergenic |
TAAGAAGTTCAGCATTTGTT+TGG | 0.396948 | 2.2:+69105225 | None:intergenic |
AATGCATGGATTGGCATTGA+TGG | 0.400045 | 2.2:-69104275 | MS.gene01425:CDS |
TGCAGCATATAACAAAGCTT+TGG | 0.404233 | 2.2:-69107190 | MS.gene01425:intron |
AGCTTGTACTGTATTATTAA+GGG | 0.412154 | 2.2:-69104871 | MS.gene01425:CDS |
CTTGTAGTGCGGTCATTGTC+CGG | 0.414199 | 2.2:+69104402 | None:intergenic |
CTGGAGTCTCTTGTTGAAGT+TGG | 0.416658 | 2.2:-69105192 | MS.gene01425:CDS |
ATTATTAAGGGGTGCTAGTA+AGG | 0.424390 | 2.2:-69104859 | MS.gene01425:CDS |
GAACAGACCAGATGAGTTGC+AGG | 0.428469 | 2.2:-69104985 | MS.gene01425:CDS |
GATATAATTCGTACAACATT+GGG | 0.434382 | 2.2:-69108565 | MS.gene01425:CDS |
TTCTCTGTAACAACCAAGTC+TGG | 0.436296 | 2.2:+69105122 | None:intergenic |
TGAAAATTATAGCATGCAAA+TGG | 0.436575 | 2.2:-69104302 | MS.gene01425:intron |
TGAATCTATTCCACGTACTT+TGG | 0.438051 | 2.2:-69104450 | MS.gene01425:CDS |
CTCGCCGTCGGCATCTCCCT+CGG | 0.440258 | 2.2:+69103814 | None:intergenic |
CTTTGAAGGGCCTGCTCCAG+GGG | 0.441053 | 2.2:+69103850 | None:intergenic |
TCAGACTCCTGCAACTCATC+TGG | 0.446459 | 2.2:+69104978 | None:intergenic |
GCAATGGCAGCAGCTTCATA+TGG | 0.448185 | 2.2:+69104476 | None:intergenic |
AACAAAGATGTGGTTGCCCC+TGG | 0.456951 | 2.2:-69105323 | MS.gene01425:CDS |
GTTCTTGTCAATGAAAGCTT+CGG | 0.464365 | 2.2:+69107315 | None:intergenic |
TTACGGTCTTGAGCATCAAT+AGG | 0.467143 | 2.2:+69107132 | None:intergenic |
AATGCAGGAGGACAAATGTT+GGG | 0.467727 | 2.2:-69106816 | MS.gene01425:intron |
CCAAAACTTGTTCCTGGAGG+TGG | 0.476990 | 2.2:-69104689 | MS.gene01425:CDS |
AAGCATGCATGCAGCTTCAA+TGG | 0.478250 | 2.2:+69103916 | None:intergenic |
CAGGAGTCTGATGTCGGTAC+TGG | 0.489559 | 2.2:-69104966 | MS.gene01425:CDS |
ATCAAGAAGAAGCAGGCCCC+TGG | 0.492359 | 2.2:-69103866 | MS.gene01425:CDS |
TGATATAATTCGTACAACAT+TGG | 0.494523 | 2.2:-69108566 | MS.gene01425:CDS |
TGAGGATTCGAGAGTTCTCA+AGG | 0.501299 | 2.2:-69105357 | MS.gene01425:CDS |
ATCAAGGTTGAGAAGGTCCC+TGG | 0.501501 | 2.2:-69105389 | MS.gene01425:CDS |
AGAGGATCACCTTTGACGCC+TGG | 0.511277 | 2.2:+69108691 | None:intergenic |
GAGTCTCTTGTTGAAGTTGG+AGG | 0.512986 | 2.2:-69105189 | MS.gene01425:CDS |
AGCATATAACAAAGCTTTGG+AGG | 0.514704 | 2.2:-69107187 | MS.gene01425:CDS |
ATTGGCATTGATGGAAATAC+TGG | 0.514728 | 2.2:-69104266 | MS.gene01425:CDS |
CGTACTTTGGCACAAAATTG+TGG | 0.516524 | 2.2:-69104437 | MS.gene01425:CDS |
ATTGTGGAGTAAACGTCATC+CGG | 0.520410 | 2.2:-69104421 | MS.gene01425:CDS |
GACTTGGTTGTTACAGAGAA+GGG | 0.522462 | 2.2:-69105119 | MS.gene01425:CDS |
CTGATGTCGGTACTGGTGCT+GGG | 0.526357 | 2.2:-69104959 | MS.gene01425:CDS |
AACTTCTTAAAGAAGAAGAC+TGG | 0.529976 | 2.2:-69105211 | MS.gene01425:CDS |
CGGACAATGACCGCACTACA+AGG | 0.532946 | 2.2:-69104401 | MS.gene01425:CDS |
TGAGGTTGAAAGAAACCTAC+AGG | 0.532972 | 2.2:-69104826 | MS.gene01425:intron |
AAGCATCTTTAGCATGGACC+TGG | 0.533448 | 2.2:+69108540 | None:intergenic |
GAGACAAGTACCTTGGCAGC+TGG | 0.535922 | 2.2:+69107921 | None:intergenic |
TCTTTCTCCTCATCTTGCCA+GGG | 0.536384 | 2.2:+69105306 | None:intergenic |
AAATGCAGGAGGACAAATGT+TGG | 0.537076 | 2.2:-69106817 | MS.gene01425:intron |
GGTGCATCATGCTAATATCC+AGG | 0.537436 | 2.2:-69108709 | MS.gene01425:CDS |
GGTCCCTGGCGCGCAGCTTG+AGG | 0.537728 | 2.2:-69105375 | MS.gene01425:CDS |
ATCTCTGTAGCACCACCTCC+AGG | 0.539267 | 2.2:+69104677 | None:intergenic |
CAATGAAAGCTTCGGCAACA+TGG | 0.540939 | 2.2:+69107323 | None:intergenic |
GTAAACTACAACAGGAATTG+TGG | 0.545065 | 2.2:-69107991 | MS.gene01425:intron |
AATCCTCAAGCTGCGCGCCA+GGG | 0.549966 | 2.2:+69105372 | None:intergenic |
TGCTAATATCCAGGCGTCAA+AGG | 0.552854 | 2.2:-69108700 | MS.gene01425:intron |
ATTGAAGTTTAAACCAGACT+TGG | 0.553489 | 2.2:-69105135 | MS.gene01425:CDS |
GAGTGGAATCAAGAAGAAGC+AGG | 0.556687 | 2.2:-69103873 | MS.gene01425:CDS |
TGGAATAGATTCAAAAGCAA+TGG | 0.561218 | 2.2:+69104460 | None:intergenic |
TATCTACATCTCTTAAACCA+TGG | 0.561631 | 2.2:+69105423 | None:intergenic |
CAAATTCACAAGTCAATTTG+GGG | 0.565801 | 2.2:-69106769 | MS.gene01425:CDS |
AAATTATATCAAGGTTGAGA+AGG | 0.566760 | 2.2:-69105396 | MS.gene01425:CDS |
TATTGCTCATCCAGCTGCCA+AGG | 0.569445 | 2.2:-69107931 | MS.gene01425:intron |
TGCCATTATCTGAGCAAGCA+TGG | 0.569972 | 2.2:-69105080 | MS.gene01425:CDS |
AATGGAGAAAATGCATGGAT+TGG | 0.569974 | 2.2:-69104284 | MS.gene01425:CDS |
CAGAAGAGTTCTTCTATCGA+AGG | 0.570379 | 2.2:-69104632 | MS.gene01425:CDS |
TTCGTACAACATTGGGACCC+AGG | 0.571407 | 2.2:-69108558 | MS.gene01425:CDS |
TCTCAATCTTAGGCTTTGAA+GGG | 0.572066 | 2.2:+69103837 | None:intergenic |
AATAACAGCACCGCATGCCT+TGG | 0.573559 | 2.2:+69105010 | None:intergenic |
CAAGACGAAGAAGTCGGAGA+TGG | 0.577173 | 2.2:-69107705 | MS.gene01425:CDS |
AGACTTGGTTGTTACAGAGA+AGG | 0.577254 | 2.2:-69105120 | MS.gene01425:CDS |
GTGGGTGTTGATATTGGCCA+TGG | 0.577458 | 2.2:-69105440 | MS.gene01425:CDS |
TGGAAGGATTTGCTCGCCGT+CGG | 0.584192 | 2.2:+69103802 | None:intergenic |
GCTTGTACTGTATTATTAAG+GGG | 0.588332 | 2.2:-69104870 | MS.gene01425:CDS |
AGTAATGTTTAACAAAGATG+TGG | 0.589801 | 2.2:-69105333 | MS.gene01425:CDS |
TTCTATCGAAGGCATTGAGA+AGG | 0.594600 | 2.2:-69104621 | MS.gene01425:intron |
CATCCTACAGTTATTTGCCG+AGG | 0.596745 | 2.2:-69107289 | MS.gene01425:intron |
TATTGATGCTACTACAACAG+TGG | 0.599428 | 2.2:-69105459 | MS.gene01425:CDS |
ATCAAGAAGCATCTTTAGCA+TGG | 0.599778 | 2.2:+69108534 | None:intergenic |
GAAACGTGAGTCTGGAGCAA+AGG | 0.599966 | 2.2:-69108730 | MS.gene01425:CDS |
TGCTGACATGAAAGAGCGCA+AGG | 0.603461 | 2.2:-69104237 | MS.gene01425:intron |
TGATAATAACCGAATTGCCA+AGG | 0.604859 | 2.2:-69105027 | MS.gene01425:CDS |
ATGCTTCTTGATGCTTCTGG+AGG | 0.606288 | 2.2:-69108523 | MS.gene01425:intron |
AGGATTGATGATATAGTGAG+TGG | 0.606903 | 2.2:-69103890 | MS.gene01425:CDS |
AACCGAATTGCCAAGGCATG+CGG | 0.607588 | 2.2:-69105020 | MS.gene01425:CDS |
ATGCAAATGGAGAAAATGCA+TGG | 0.610848 | 2.2:-69104289 | MS.gene01425:CDS |
CTTACTGAGAACTACAACTG+AGG | 0.611153 | 2.2:+69109823 | None:intergenic |
TAGTAAGGATCTCTTGAATG+AGG | 0.616230 | 2.2:-69104844 | MS.gene01425:CDS |
CTTTCTCCTCATCTTGCCAG+GGG | 0.618134 | 2.2:+69105307 | None:intergenic |
TTACCTCGGCAAATAACTGT+AGG | 0.621545 | 2.2:+69107286 | None:intergenic |
CTGGGATGCCTATAATGTGA+AGG | 0.622790 | 2.2:-69103957 | MS.gene01425:CDS |
AGGATGCCATGTCTGTTGCT+AGG | 0.623139 | 2.2:-69104727 | MS.gene01425:CDS |
ATGCAGGAGGACAAATGTTG+GGG | 0.628171 | 2.2:-69106815 | MS.gene01425:intron |
AAGCCTAAGATTGAGACCGA+GGG | 0.639435 | 2.2:-69103830 | MS.gene01425:CDS |
AAAGCCTAAGATTGAGACCG+AGG | 0.639722 | 2.2:-69103831 | MS.gene01425:CDS |
GGAATTGTGGTAACAAACGA+TGG | 0.639749 | 2.2:-69107978 | MS.gene01425:CDS |
AGCATCTTTAGCATGGACCT+GGG | 0.641425 | 2.2:+69108541 | None:intergenic |
GAGACCGAGGGAGATGCCGA+CGG | 0.648360 | 2.2:-69103818 | MS.gene01425:CDS |
GTTGGAGGAAGAATACATTG+AGG | 0.653847 | 2.2:-69105174 | MS.gene01425:CDS |
GAGTTGCAGGAGTCTGATGT+CGG | 0.655712 | 2.2:-69104972 | MS.gene01425:CDS |
ATTGATGCTACTACAACAGT+GGG | 0.658789 | 2.2:-69105458 | MS.gene01425:CDS |
TATGTTCCTAGCAACAGACA+TGG | 0.662859 | 2.2:+69104721 | None:intergenic |
ACCAAGAATGATGACAGATG+TGG | 0.671414 | 2.2:+69107680 | None:intergenic |
AATCCAAAACTTGTTCCTGG+AGG | 0.673753 | 2.2:-69104692 | MS.gene01425:CDS |
TGGTTGCCCCTGGCAAGATG+AGG | 0.674881 | 2.2:-69105313 | MS.gene01425:CDS |
CAATCAAGAAGAATGATACG+TGG | 0.679875 | 2.2:+69105275 | None:intergenic |
CGCACCCAAGACGAAGAAGT+CGG | 0.680075 | 2.2:-69107711 | MS.gene01425:CDS |
GAGGATTCGAGAGTTCTCAA+GGG | 0.691262 | 2.2:-69105356 | MS.gene01425:CDS |
AATCAAGAAGAATGATACGT+GGG | 0.699347 | 2.2:+69105276 | None:intergenic |
TTAGTGCAATCAGAAGACTG+AGG | 0.785980 | 2.2:-69105055 | MS.gene01425:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATATTAAAAATTATATCA+AGG | - | chr2.2:69108221-69108240 | MS.gene01425:intron | 10.0% |
!!! | TTAATATTTTCAAACATTTT+AGG | - | chr2.2:69106942-69106961 | MS.gene01425:intron | 10.0% |
!! | TGTTTAACATCAATATATAT+AGG | + | chr2.2:69105984-69106003 | None:intergenic | 15.0% |
!!! | AAAGTTTTTTGCTTATAATT+TGG | - | chr2.2:69107518-69107537 | MS.gene01425:intron | 15.0% |
!!! | AAGTTTTTTGCTTATAATTT+GGG | - | chr2.2:69107519-69107538 | MS.gene01425:intron | 15.0% |
!!! | ACAACGTTAATTTTTTTTTT+AGG | + | chr2.2:69104614-69104633 | None:intergenic | 15.0% |
!!! | TAGATTATTCTTTTAAAATG+TGG | + | chr2.2:69104682-69104701 | None:intergenic | 15.0% |
!!! | TTAGGAAATAAAACTATTTT+AGG | - | chr2.2:69107642-69107661 | MS.gene01425:intron | 15.0% |
!!! | TTATTTGAAGTTAAGAAAAT+TGG | - | chr2.2:69108690-69108709 | MS.gene01425:intron | 15.0% |
!!! | TTGAAAATGATTTTAAACAT+AGG | - | chr2.2:69104573-69104592 | MS.gene01425:intron | 15.0% |
!! | AAACATAACTCTAAATATCA+AGG | - | chr2.2:69107458-69107477 | MS.gene01425:intron | 20.0% |
!! | AACATAACTCTAAATATCAA+GGG | - | chr2.2:69107459-69107478 | MS.gene01425:intron | 20.0% |
!! | AAGAGAATTTAAATTACTAC+GGG | + | chr2.2:69106058-69106077 | None:intergenic | 20.0% |
!! | AATAAGAAAATATTTAGCCT+CGG | + | chr2.2:69105406-69105425 | None:intergenic | 20.0% |
!! | ACTTATAGTAGCATTAAATT+TGG | + | chr2.2:69107858-69107877 | None:intergenic | 20.0% |
!! | ATAATTCAATAGATCTAGAA+AGG | + | chr2.2:69108108-69108127 | None:intergenic | 20.0% |
!! | CTTATAGTAGCATTAAATTT+GGG | + | chr2.2:69107857-69107876 | None:intergenic | 20.0% |
!! | GAAGAGAATTTAAATTACTA+CGG | + | chr2.2:69106059-69106078 | None:intergenic | 20.0% |
!! | TAAAAATAAATGGATAACGA+AGG | + | chr2.2:69109508-69109527 | None:intergenic | 20.0% |
!! | TGATAGGAAAAAAAAACTTA+CGG | + | chr2.2:69106514-69106533 | None:intergenic | 20.0% |
!! | TTATTTATACACTATTAGCT+AGG | + | chr2.2:69107710-69107729 | None:intergenic | 20.0% |
!! | TTGGAATGACAAATTTAAAT+TGG | - | chr2.2:69107487-69107506 | MS.gene01425:intron | 20.0% |
!!! | AAATAATGATGGATAGTTTT+CGG | + | chr2.2:69109460-69109479 | None:intergenic | 20.0% |
!!! | AAATGATTTTAAACATAGGT+TGG | - | chr2.2:69104577-69104596 | MS.gene01425:intron | 20.0% |
!!! | AATTTCGAATGTATTGATTA+TGG | - | chr2.2:69103976-69103995 | MS.gene01425:intron | 20.0% |
!!! | ATAATTTGCCATATTTTGTT+TGG | - | chr2.2:69104503-69104522 | MS.gene01425:intron | 20.0% |
!!! | ATTTGTTTTGATTTTCAATG+TGG | - | chr2.2:69107594-69107613 | MS.gene01425:intron | 20.0% |
!!! | ATTTTATTACCAAATGATTC+TGG | + | chr2.2:69104485-69104504 | None:intergenic | 20.0% |
!!! | CTTTTTTTTGCTTATAACTT+GGG | + | chr2.2:69107151-69107170 | None:intergenic | 20.0% |
!!! | GGAAATAAAACTATTTTGTT+TGG | + | chr2.2:69107231-69107250 | None:intergenic | 20.0% |
!!! | TAAGCATAGCTTTTTAAATA+TGG | - | chr2.2:69104829-69104848 | MS.gene01425:CDS | 20.0% |
!!! | TATCCATTTATTTTTAAACG+AGG | - | chr2.2:69109512-69109531 | MS.gene01425:intron | 20.0% |
!!! | TCAATTTTAACTTTGTACAT+GGG | + | chr2.2:69104727-69104746 | None:intergenic | 20.0% |
!!! | TCTGATAATGTTTTGTATTA+TGG | - | chr2.2:69109638-69109657 | MS.gene01425:intron | 20.0% |
!!! | TCTTTTTTTTGCTTATAACT+TGG | + | chr2.2:69107152-69107171 | None:intergenic | 20.0% |
!!! | TGGTAATTTTTATAAGAGTT+TGG | - | chr2.2:69105476-69105495 | MS.gene01425:intron | 20.0% |
!!! | TTGTTGTTTCTAATTTAATG+TGG | - | chr2.2:69105012-69105031 | MS.gene01425:CDS | 20.0% |
!!! | TTGTTTTCTTAAATTACTAC+AGG | + | chr2.2:69105191-69105210 | None:intergenic | 20.0% |
!!! | TTTTTGCTTATAATTTGAGA+CGG | - | chr2.2:69107556-69107575 | MS.gene01425:intron | 20.0% |
!!! | TTTTTGTTAATCAATGCAAT+TGG | - | chr2.2:69107040-69107059 | MS.gene01425:intron | 20.0% |
!!! | TTTTTTTTTCCTATCAAGAT+TGG | - | chr2.2:69106518-69106537 | MS.gene01425:intron | 20.0% |
! | AAAAATGTACCAATCTTGAT+AGG | + | chr2.2:69106530-69106549 | None:intergenic | 25.0% |
! | AAATGTGGACAGATATAAAA+TGG | + | chr2.2:69104667-69104686 | None:intergenic | 25.0% |
! | AAATTATATCAAGGTTGAGA+AGG | - | chr2.2:69108230-69108249 | MS.gene01425:intron | 25.0% |
! | AAGCTTGTACTGTATTATTA+AGG | - | chr2.2:69108754-69108773 | MS.gene01425:intron | 25.0% |
! | AATAATACAGTACAAGCTTT+GGG | + | chr2.2:69108753-69108772 | None:intergenic | 25.0% |
! | AATACTATGAAGGGTAATTT+AGG | - | chr2.2:69107624-69107643 | MS.gene01425:intron | 25.0% |
! | AATACTATGAAGGGTAATTT+AGG | + | chr2.2:69107643-69107624 | None:intergenic | 25.0% |
! | AATATCAATAACTAACCTGT+AGG | + | chr2.2:69108818-69108837 | None:intergenic | 25.0% |
! | AATGTTGTTAGAAAATAAGC+GGG | - | chr2.2:69104748-69104767 | MS.gene01425:intron | 25.0% |
! | ACCAGAATGAATTAAAAGTT+AGG | + | chr2.2:69109098-69109117 | None:intergenic | 25.0% |
! | AGCTTGTACTGTATTATTAA+GGG | - | chr2.2:69108755-69108774 | MS.gene01425:intron | 25.0% |
! | AGTAATGTTTAACAAAGATG+TGG | - | chr2.2:69108293-69108312 | MS.gene01425:intron | 25.0% |
! | AGTTTACAGGAAAAAAGAAT+AGG | + | chr2.2:69105622-69105641 | None:intergenic | 25.0% |
! | ATACATAAAATCAGTTCACT+CGG | + | chr2.2:69103933-69103952 | None:intergenic | 25.0% |
! | ATTAATACGATACATTACCT+CGG | + | chr2.2:69106357-69106376 | None:intergenic | 25.0% |
! | ATTATTCATGTGATGGTTAT+TGG | - | chr2.2:69107065-69107084 | MS.gene01425:intron | 25.0% |
! | ATTGGTTATTATTCATGTGA+TGG | - | chr2.2:69107058-69107077 | MS.gene01425:intron | 25.0% |
! | CATTCACTATTGTTAAATGA+TGG | - | chr2.2:69107924-69107943 | MS.gene01425:intron | 25.0% |
! | GAATGTTGTTAGAAAATAAG+CGG | - | chr2.2:69104747-69104766 | MS.gene01425:intron | 25.0% |
! | GATATAATTCGTACAACATT+GGG | - | chr2.2:69105061-69105080 | MS.gene01425:CDS | 25.0% |
! | GTAATTTAAATTCTCTTCTC+TGG | - | chr2.2:69106061-69106080 | MS.gene01425:intron | 25.0% |
! | TAAAGCAGTTGAATTGAAAA+AGG | + | chr2.2:69107679-69107698 | None:intergenic | 25.0% |
! | TAACATGATATGTAAGTTGT+AGG | - | chr2.2:69105515-69105534 | MS.gene01425:intron | 25.0% |
! | TAATAATACAGTACAAGCTT+TGG | + | chr2.2:69108754-69108773 | None:intergenic | 25.0% |
! | TAATGTATCGTATTAATCAG+CGG | - | chr2.2:69106360-69106379 | MS.gene01425:intron | 25.0% |
! | TATGTCAAGAAGAAATTCAA+AGG | + | chr2.2:69106764-69106783 | None:intergenic | 25.0% |
! | TGAAAATTATAGCATGCAAA+TGG | - | chr2.2:69109324-69109343 | MS.gene01425:intron | 25.0% |
! | TGAGCAAAGAATATCATATT+TGG | + | chr2.2:69106922-69106941 | None:intergenic | 25.0% |
! | TGATATAATTCGTACAACAT+TGG | - | chr2.2:69105060-69105079 | MS.gene01425:CDS | 25.0% |
! | TGCATAGCTATAGTTATAAA+GGG | + | chr2.2:69107898-69107917 | None:intergenic | 25.0% |
! | TTCTATATTCCGATTATTTG+TGG | - | chr2.2:69106604-69106623 | MS.gene01425:intron | 25.0% |
! | TTGCCTCGTTTAAAAATAAA+TGG | + | chr2.2:69109518-69109537 | None:intergenic | 25.0% |
! | TTGTTGTGTCATATACTAAA+TGG | - | chr2.2:69106198-69106217 | MS.gene01425:intron | 25.0% |
! | TTTCGTTCATCAATAGAATT+GGG | + | chr2.2:69106791-69106810 | None:intergenic | 25.0% |
!! | AATTACTGATGTTATTTGTG+TGG | + | chr2.2:69106014-69106033 | None:intergenic | 25.0% |
!! | ATAGCTTTTTAAATATGGAG+TGG | - | chr2.2:69104834-69104853 | MS.gene01425:CDS | 25.0% |
!! | ATTACTGATGTTATTTGTGT+GGG | + | chr2.2:69106013-69106032 | None:intergenic | 25.0% |
!! | ATTTTATTGATATTGCTTCG+TGG | - | chr2.2:69105737-69105756 | MS.gene01425:intron | 25.0% |
!! | GTACACAATTTTATACTGTA+AGG | + | chr2.2:69106392-69106411 | None:intergenic | 25.0% |
!! | TAATTCTTGTTGATTATCAG+TGG | - | chr2.2:69109127-69109146 | MS.gene01425:intron | 25.0% |
!! | TGTTTCAAGTAGAATCAAAT+CGG | - | chr2.2:69104113-69104132 | MS.gene01425:intron | 25.0% |
!! | TTTTCGTTCATCAATAGAAT+TGG | + | chr2.2:69106792-69106811 | None:intergenic | 25.0% |
!!! | AATTTTACAAAGTGTCTGTT+TGG | + | chr2.2:69104194-69104213 | None:intergenic | 25.0% |
!!! | AGTTGTTTTGATTTTCAATG+TGG | + | chr2.2:69107282-69107301 | None:intergenic | 25.0% |
!!! | CTCAATTTTAACTTTGTACA+TGG | + | chr2.2:69104728-69104747 | None:intergenic | 25.0% |
!!! | GAACTGATTTTATGTATGTT+TGG | - | chr2.2:69103936-69103955 | MS.gene01425:CDS | 25.0% |
!!! | TCCTAACTTTTAATTCATTC+TGG | - | chr2.2:69109094-69109113 | MS.gene01425:intron | 25.0% |
!!! | TTTTAGGTTGATGTTTAACT+TGG | - | chr2.2:69106958-69106977 | MS.gene01425:intron | 25.0% |
!!! | TTTTTGTTCTAAATGACTCA+TGG | - | chr2.2:69103852-69103871 | MS.gene01425:CDS | 25.0% |
AAAAAAAGCTAACGCGTAAA+GGG | + | chr2.2:69103837-69103856 | None:intergenic | 30.0% | |
AAAAAGCAACCTGATAAATC+AGG | + | chr2.2:69106238-69106257 | None:intergenic | 30.0% | |
AAAAGCAACCTGATAAATCA+GGG | + | chr2.2:69106237-69106256 | None:intergenic | 30.0% | |
AAAGAATTTAGGAGGTTCTA+AGG | + | chr2.2:69107325-69107344 | None:intergenic | 30.0% | |
AAATACTAGTTCCAAGGATT+AGG | + | chr2.2:69107412-69107431 | None:intergenic | 30.0% | |
AACTTCTTAAAGAAGAAGAC+TGG | - | chr2.2:69108415-69108434 | MS.gene01425:intron | 30.0% | |
AAGCAAACAGAATTGCAATA+TGG | + | chr2.2:69106693-69106712 | None:intergenic | 30.0% | |
AATAGAAGTTAAAGAAGACC+AGG | + | chr2.2:69109302-69109321 | None:intergenic | 30.0% | |
AATCAAGAAGAATGATACGT+GGG | + | chr2.2:69108353-69108372 | None:intergenic | 30.0% | |
ACCAAATTCACAAGTCAATT+TGG | - | chr2.2:69106855-69106874 | MS.gene01425:intron | 30.0% | |
ACTATTTGTGCAATCTATCT+AGG | + | chr2.2:69106638-69106657 | None:intergenic | 30.0% | |
ATATGTAAGTTGTAGGTTCT+GGG | - | chr2.2:69105522-69105541 | MS.gene01425:intron | 30.0% | |
ATGAACCACCAAACAAAATA+TGG | + | chr2.2:69104514-69104533 | None:intergenic | 30.0% | |
ATTGAAGTTTAAACCAGACT+TGG | - | chr2.2:69108491-69108510 | MS.gene01425:intron | 30.0% | |
CAAATTCACAAGTCAATTTG+GGG | - | chr2.2:69106857-69106876 | MS.gene01425:intron | 30.0% | |
CACATCAGAATTAAAACCAA+AGG | + | chr2.2:69104781-69104800 | None:intergenic | 30.0% | |
CAGTGAACAAGAAAGAATTT+AGG | + | chr2.2:69107336-69107355 | None:intergenic | 30.0% | |
CCAAATTCACAAGTCAATTT+GGG | - | chr2.2:69106856-69106875 | MS.gene01425:intron | 30.0% | |
CCATGTTTATTTCAGTACAA+CGG | - | chr2.2:69109552-69109571 | MS.gene01425:intron | 30.0% | |
GCTTATAATTTGGGTGAAAA+AGG | - | chr2.2:69107528-69107547 | MS.gene01425:intron | 30.0% | |
GCTTGTACTGTATTATTAAG+GGG | - | chr2.2:69108756-69108775 | MS.gene01425:intron | 30.0% | |
GTAATTTAAATTCTCCTCTC+TGG | - | chr2.2:69106090-69106109 | MS.gene01425:intron | 30.0% | |
GTGCATAGCTATAGTTATAA+AGG | + | chr2.2:69107899-69107918 | None:intergenic | 30.0% | |
TAAATCCTGGAGTATAATCA+AGG | + | chr2.2:69108145-69108164 | None:intergenic | 30.0% | |
TAAGAAGTTCAGCATTTGTT+TGG | + | chr2.2:69108404-69108423 | None:intergenic | 30.0% | |
TAGATTGCACAAATAGTTTG+TGG | - | chr2.2:69106641-69106660 | MS.gene01425:intron | 30.0% | |
TATATTCCGATTATTTGTGG+AGG | - | chr2.2:69106607-69106626 | MS.gene01425:intron | 30.0% | |
TATCTACATCTCTTAAACCA+TGG | + | chr2.2:69108206-69108225 | None:intergenic | 30.0% | |
TCACATTAGAGAATGCATTA+TGG | - | chr2.2:69104544-69104563 | MS.gene01425:intron | 30.0% | |
TGAACAAGAAAGAATTTAGG+AGG | + | chr2.2:69107333-69107352 | None:intergenic | 30.0% | |
TGACTTTGGCAAAATAATGA+TGG | + | chr2.2:69109471-69109490 | None:intergenic | 30.0% | |
TGCATTCTCTAATGTGAAAA+CGG | + | chr2.2:69104541-69104560 | None:intergenic | 30.0% | |
TGGAATAGATTCAAAAGCAA+TGG | + | chr2.2:69109169-69109188 | None:intergenic | 30.0% | |
TTAAATTACTACGGGTATCA+GGG | + | chr2.2:69106050-69106069 | None:intergenic | 30.0% | |
TTATTTGTGCTCTTGTTCTT+TGG | - | chr2.2:69107735-69107754 | MS.gene01425:intron | 30.0% | |
TTGAGTGTAAGAATCATGTT+TGG | - | chr2.2:69104337-69104356 | MS.gene01425:intron | 30.0% | |
TTTAAATTACTACGGGTATC+AGG | + | chr2.2:69106051-69106070 | None:intergenic | 30.0% | |
! | AAAAATCCAAAACTTGTTCC+TGG | - | chr2.2:69108931-69108950 | MS.gene01425:intron | 30.0% |
! | AGATTGCACAAATAGTTTGT+GGG | - | chr2.2:69106642-69106661 | MS.gene01425:intron | 30.0% |
! | AGGCTGATATTTTCATTAGA+TGG | + | chr2.2:69107389-69107408 | None:intergenic | 30.0% |
! | ATGTGCAATGGTTTATGTTT+TGG | - | chr2.2:69104237-69104256 | MS.gene01425:intron | 30.0% |
! | ATTCTGGAGAGAAAATTGAT+TGG | + | chr2.2:69104469-69104488 | None:intergenic | 30.0% |
! | ATTTTCTCTCCAGAATCATT+TGG | - | chr2.2:69104473-69104492 | MS.gene01425:CDS | 30.0% |
! | GTTTCAAGTAGAATCAAATC+GGG | - | chr2.2:69104114-69104133 | MS.gene01425:intron | 30.0% |
! | TTCTGGAGAGAAAATTGATT+GGG | + | chr2.2:69104468-69104487 | None:intergenic | 30.0% |
! | TTGTGTAGTGGTTTATGTTT+TGG | - | chr2.2:69104280-69104299 | MS.gene01425:CDS | 30.0% |
! | TTTTTCCTGTAAACTACAAC+AGG | - | chr2.2:69105627-69105646 | MS.gene01425:intron | 30.0% |
! | TTTTTGCTTATAACTTGGGA+CGG | + | chr2.2:69107147-69107166 | None:intergenic | 30.0% |
!! | ATTTGCCATATTTTGTTTGG+TGG | - | chr2.2:69104506-69104525 | MS.gene01425:intron | 30.0% |
!! | TTCATACTTTCTGAAATTGC+TGG | - | chr2.2:69105855-69105874 | MS.gene01425:intron | 30.0% |
!!! | ATTTTAACTTTGTACATGGG+TGG | + | chr2.2:69104724-69104743 | None:intergenic | 30.0% |
!!! | CTAAATATCAAGGGTACTTT+TGG | - | chr2.2:69107468-69107487 | MS.gene01425:intron | 30.0% |
!!! | TACTTTTTCCCTGATTTATC+AGG | - | chr2.2:69106226-69106245 | MS.gene01425:intron | 30.0% |
AAAGTGACTTGAATGTGCAA+TGG | - | chr2.2:69104225-69104244 | MS.gene01425:intron | 35.0% | |
AATGGAGAAAATGCATGGAT+TGG | - | chr2.2:69109342-69109361 | MS.gene01425:intron | 35.0% | |
AATTACATCAATCCGTGCTT+TGG | + | chr2.2:69107022-69107041 | None:intergenic | 35.0% | |
ACACCTTCAATCATAAGTGT+TGG | - | chr2.2:69105259-69105278 | MS.gene01425:CDS | 35.0% | |
ACGGAGCTTATAGCTTATTA+AGG | - | chr2.2:69105286-69105305 | MS.gene01425:CDS | 35.0% | |
ACGTAAAAGTGATTGTGTAG+TGG | - | chr2.2:69104268-69104287 | MS.gene01425:CDS | 35.0% | |
ACTTATTGCCTATAAAGCAC+TGG | - | chr2.2:69105149-69105168 | MS.gene01425:CDS | 35.0% | |
AGAAAGCAGCATGATCAAAT+AGG | + | chr2.2:69108861-69108880 | None:intergenic | 35.0% | |
AGAATAGGTGTCTAAGTACT+CGG | + | chr2.2:69105607-69105626 | None:intergenic | 35.0% | |
AGTACAGTGTAATGAAGATG+TGG | + | chr2.2:69107124-69107143 | None:intergenic | 35.0% | |
AGTTTGTGCCTTCACATTAT+AGG | + | chr2.2:69109680-69109699 | None:intergenic | 35.0% | |
ATGACACAACAAACACATTC+TGG | + | chr2.2:69106190-69106209 | None:intergenic | 35.0% | |
ATGCAAATGGAGAAAATGCA+TGG | - | chr2.2:69109337-69109356 | MS.gene01425:intron | 35.0% | |
ATGTTTGTCTGTTCTCGAAT+AGG | + | chr2.2:69104421-69104440 | None:intergenic | 35.0% | |
ATTGATGCTACTACAACAGT+GGG | - | chr2.2:69108168-69108187 | MS.gene01425:intron | 35.0% | |
CAAAAAAAGCTAACGCGTAA+AGG | + | chr2.2:69103838-69103857 | None:intergenic | 35.0% | |
CAATCAAGAAGAATGATACG+TGG | + | chr2.2:69108354-69108373 | None:intergenic | 35.0% | |
CAATTCCTGTTGTAGTTTAC+AGG | + | chr2.2:69105635-69105654 | None:intergenic | 35.0% | |
CCGTTGTACTGAAATAAACA+TGG | + | chr2.2:69109555-69109574 | None:intergenic | 35.0% | |
CTATTGATGAACGAAAATGC+AGG | - | chr2.2:69106795-69106814 | MS.gene01425:CDS | 35.0% | |
CTATTGTTAAATGATGGCTG+TGG | - | chr2.2:69107930-69107949 | MS.gene01425:intron | 35.0% | |
CTGAGATGTACATAGTTTCT+TGG | - | chr2.2:69105440-69105459 | MS.gene01425:CDS | 35.0% | |
CTTGATTCTAACTTGAAGCT+AGG | + | chr2.2:69104380-69104399 | None:intergenic | 35.0% | |
GATATGTAAGTTGTAGGTTC+TGG | - | chr2.2:69105521-69105540 | MS.gene01425:intron | 35.0% | |
GGCGTGTAAAATACTATGAA+GGG | - | chr2.2:69107615-69107634 | MS.gene01425:intron | 35.0% | |
GGCGTGTAAAATACTATGAA+GGG | + | chr2.2:69107634-69107615 | None:intergenic | 35.0% | |
GGGTAGTAATTCATAGTACA+GGG | - | chr2.2:69106667-69106686 | MS.gene01425:intron | 35.0% | |
GGTAGCAAATTACAGTTATC+TGG | + | chr2.2:69107001-69107020 | None:intergenic | 35.0% | |
GTAAACTACAACAGGAATTG+TGG | - | chr2.2:69105635-69105654 | MS.gene01425:intron | 35.0% | |
GTGTTTCTTTCTCTCTAGTT+AGG | - | chr2.2:69104639-69104658 | MS.gene01425:CDS | 35.0% | |
GTTCTTGTCAATGAAAGCTT+CGG | + | chr2.2:69106314-69106333 | None:intergenic | 35.0% | |
TAGCATCAATAGCTAAATCC+TGG | + | chr2.2:69108158-69108177 | None:intergenic | 35.0% | |
TAGTAAGGATCTCTTGAATG+AGG | - | chr2.2:69108782-69108801 | MS.gene01425:intron | 35.0% | |
TATGAGTTCATGTTTGTCTG+CGG | - | chr2.2:69103893-69103912 | MS.gene01425:CDS | 35.0% | |
TATTGATGCTACTACAACAG+TGG | - | chr2.2:69108167-69108186 | MS.gene01425:intron | 35.0% | |
TCCTAACTCTAATGTGACTT+TGG | + | chr2.2:69109485-69109504 | None:intergenic | 35.0% | |
TCCTTGGAACTAGTATTTCA+CGG | - | chr2.2:69107414-69107433 | MS.gene01425:intron | 35.0% | |
TGAACTGAGATTCTTTCACA+TGG | - | chr2.2:69106126-69106145 | MS.gene01425:intron | 35.0% | |
TGAATCTATTCCACGTACTT+TGG | - | chr2.2:69109176-69109195 | MS.gene01425:intron | 35.0% | |
TGATAATAACCGAATTGCCA+AGG | - | chr2.2:69108599-69108618 | MS.gene01425:intron | 35.0% | |
TGCAGCATATAACAAAGCTT+TGG | - | chr2.2:69106436-69106455 | MS.gene01425:intron | 35.0% | |
TGCCCTCTTGAGTATAAAAA+GGG | - | chr2.2:69108372-69108391 | MS.gene01425:intron | 35.0% | |
TGCTGTGAGTATATTTCTCT+TGG | - | chr2.2:69106887-69106906 | MS.gene01425:intron | 35.0% | |
TGGCGTGTAAAATACTATGA+AGG | - | chr2.2:69107614-69107633 | MS.gene01425:intron | 35.0% | |
TGGCGTGTAAAATACTATGA+AGG | + | chr2.2:69107633-69107614 | None:intergenic | 35.0% | |
TGGGTAGTAATTCATAGTAC+AGG | - | chr2.2:69106666-69106685 | MS.gene01425:intron | 35.0% | |
TTGAATGTAATCCCATGTGT+TGG | - | chr2.2:69105216-69105235 | MS.gene01425:CDS | 35.0% | |
TTGCCCTCTTGAGTATAAAA+AGG | - | chr2.2:69108371-69108390 | MS.gene01425:intron | 35.0% | |
TTTCTTAGCAAGTCTGATCT+TGG | + | chr2.2:69107185-69107204 | None:intergenic | 35.0% | |
TTTGCAATTGTCATTCACTG+AGG | - | chr2.2:69105328-69105347 | MS.gene01425:CDS | 35.0% | |
! | AGACAACTGTGTTGATGTTA+GGG | - | chr2.2:69107093-69107112 | MS.gene01425:intron | 35.0% |
! | AGCATATAACAAAGCTTTGG+AGG | - | chr2.2:69106439-69106458 | MS.gene01425:intron | 35.0% |
! | AGGATTGATGATATAGTGAG+TGG | - | chr2.2:69109736-69109755 | MS.gene01425:intron | 35.0% |
! | CACCCTTTTTATACTCAAGA+GGG | + | chr2.2:69108377-69108396 | None:intergenic | 35.0% |
! | CGGTAATTGAGTAGATGTTT+TGG | - | chr2.2:69107434-69107453 | MS.gene01425:intron | 35.0% |
! | TAGACAACTGTGTTGATGTT+AGG | - | chr2.2:69107092-69107111 | MS.gene01425:intron | 35.0% |
! | TAGCAAGCACTACTTAGTTT+TGG | + | chr2.2:69104974-69104993 | None:intergenic | 35.0% |
! | TCACCCTTTTTATACTCAAG+AGG | + | chr2.2:69108378-69108397 | None:intergenic | 35.0% |
! | TGAACTTTTGCAAATCCACT+TGG | + | chr2.2:69106567-69106586 | None:intergenic | 35.0% |
! | TGCTTATAATTTGAGACGGA+GGG | - | chr2.2:69107560-69107579 | MS.gene01425:intron | 35.0% |
! | TGTATTATGGTGCTAGATCT+GGG | - | chr2.2:69109651-69109670 | MS.gene01425:intron | 35.0% |
! | TTAATGTGGTTGTTGTTGAC+TGG | - | chr2.2:69105026-69105045 | MS.gene01425:CDS | 35.0% |
! | TTGCTTATAATTTGAGACGG+AGG | - | chr2.2:69107559-69107578 | MS.gene01425:intron | 35.0% |
! | TTGTATTATGGTGCTAGATC+TGG | - | chr2.2:69109650-69109669 | MS.gene01425:intron | 35.0% |
!! | AAATTGCTGGCTTATTGGAA+TGG | - | chr2.2:69105868-69105887 | MS.gene01425:intron | 35.0% |
!! | AATCATAAGTGTTGGTGCTA+CGG | - | chr2.2:69105267-69105286 | MS.gene01425:CDS | 35.0% |
!! | ACTGAGGTTCTAGCTTATTA+AGG | - | chr2.2:69105344-69105363 | MS.gene01425:CDS | 35.0% |
!! | ATCAAGAAGCATCTTTAGCA+TGG | + | chr2.2:69105095-69105114 | None:intergenic | 35.0% |
!! | ATTATTAAGGGGTGCTAGTA+AGG | - | chr2.2:69108767-69108786 | MS.gene01425:intron | 35.0% |
!! | ATTGGCATTGATGGAAATAC+TGG | - | chr2.2:69109360-69109379 | MS.gene01425:intron | 35.0% |
!! | CCCAAATTGACTTGTGAATT+TGG | + | chr2.2:69106859-69106878 | None:intergenic | 35.0% |
!! | TCTCAATCTTAGGCTTTGAA+GGG | + | chr2.2:69109792-69109811 | None:intergenic | 35.0% |
!! | TCTTACTTTTCCTTGTAGTG+CGG | + | chr2.2:69109238-69109257 | None:intergenic | 35.0% |
!! | TGTAATTTGCTACCAAAGCA+CGG | - | chr2.2:69107007-69107026 | MS.gene01425:intron | 35.0% |
!! | TTCTGAAATTGCTGGCTTAT+TGG | - | chr2.2:69105863-69105882 | MS.gene01425:intron | 35.0% |
!!! | AAGCACTACTTAGTTTTGGT+CGG | + | chr2.2:69104970-69104989 | None:intergenic | 35.0% |
AAAGCAACTTAACACCAGAG+AGG | + | chr2.2:69106107-69106126 | None:intergenic | 40.0% | |
AAATGCAGGAGGACAAATGT+TGG | - | chr2.2:69106809-69106828 | MS.gene01425:CDS | 40.0% | |
AAGATGCTTCTTGATGCTTC+TGG | - | chr2.2:69105100-69105119 | MS.gene01425:CDS | 40.0% | |
AATATCAGCCTCCTAATCCT+TGG | - | chr2.2:69107398-69107417 | MS.gene01425:intron | 40.0% | |
AATGCAGGAGGACAAATGTT+GGG | - | chr2.2:69106810-69106829 | MS.gene01425:CDS | 40.0% | |
AATTATGCCTCCTCCAAAAG+TGG | - | chr2.2:69104166-69104185 | MS.gene01425:intron | 40.0% | |
ACCAAGAATGATGACAGATG+TGG | + | chr2.2:69105949-69105968 | None:intergenic | 40.0% | |
ACCACATCTGTCATCATTCT+TGG | - | chr2.2:69105945-69105964 | MS.gene01425:intron | 40.0% | |
ACCGTGAAATACTAGTTCCA+AGG | + | chr2.2:69107418-69107437 | None:intergenic | 40.0% | |
AGAATGAGAGACAAGTACCT+TGG | + | chr2.2:69105715-69105734 | None:intergenic | 40.0% | |
AGAGAAGGGTCTTAGTGATT+TGG | - | chr2.2:69108521-69108540 | MS.gene01425:intron | 40.0% | |
ATGAGTTCATGTTTGTCTGC+GGG | - | chr2.2:69103894-69103913 | MS.gene01425:CDS | 40.0% | |
ATGCTTCATCCATGTTCGAT+GGG | - | chr2.2:69109064-69109083 | MS.gene01425:intron | 40.0% | |
ATTCCGATTATTTGTGGAGG+TGG | - | chr2.2:69106610-69106629 | MS.gene01425:intron | 40.0% | |
ATTGTGGAGTAAACGTCATC+CGG | - | chr2.2:69109205-69109224 | MS.gene01425:intron | 40.0% | |
CAGAAGAGTTCTTCTATCGA+AGG | - | chr2.2:69108994-69109013 | MS.gene01425:intron | 40.0% | |
CGGTGAATGACAATTGCAAA+CGG | + | chr2.2:69105386-69105405 | None:intergenic | 40.0% | |
CGTACTTTGGCACAAAATTG+TGG | - | chr2.2:69109189-69109208 | MS.gene01425:intron | 40.0% | |
CTGATATGACACCAACACAT+GGG | + | chr2.2:69105230-69105249 | None:intergenic | 40.0% | |
CTTACATACTGAAGACTGCT+AGG | + | chr2.2:69106724-69106743 | None:intergenic | 40.0% | |
CTTACTGAGAACTACAACTG+AGG | + | chr2.2:69103806-69103825 | None:intergenic | 40.0% | |
GAATTCAAACCCATCGAACA+TGG | + | chr2.2:69109076-69109095 | None:intergenic | 40.0% | |
GCACCAACACTTATGATTGA+AGG | + | chr2.2:69105265-69105284 | None:intergenic | 40.0% | |
GCAGCATGATCAAATAGGTT+TGG | + | chr2.2:69108856-69108875 | None:intergenic | 40.0% | |
GCCAAAGTCACATTAGAGTT+AGG | - | chr2.2:69109481-69109500 | MS.gene01425:intron | 40.0% | |
GGAATTGTGGTAACAAACGA+TGG | - | chr2.2:69105648-69105667 | MS.gene01425:intron | 40.0% | |
GTTGGAGGAAGAATACATTG+AGG | - | chr2.2:69108452-69108471 | MS.gene01425:intron | 40.0% | |
GTTGTCCTTGATTATACTCC+AGG | - | chr2.2:69108137-69108156 | MS.gene01425:intron | 40.0% | |
TACTAGTTCCAAGGATTAGG+AGG | + | chr2.2:69107409-69107428 | None:intergenic | 40.0% | |
TATCAGTGCCAGTGCTTTAT+AGG | + | chr2.2:69105160-69105179 | None:intergenic | 40.0% | |
TATGTTCCTAGCAACAGACA+TGG | + | chr2.2:69108908-69108927 | None:intergenic | 40.0% | |
TCAAGTAGAATCAAATCGGG+AGG | - | chr2.2:69104117-69104136 | MS.gene01425:intron | 40.0% | |
TCTGATATGACACCAACACA+TGG | + | chr2.2:69105231-69105250 | None:intergenic | 40.0% | |
TGAGGTTGAAAGAAACCTAC+AGG | - | chr2.2:69108800-69108819 | MS.gene01425:intron | 40.0% | |
TGGAGAGAAAATTGATTGGG+AGG | + | chr2.2:69104465-69104484 | None:intergenic | 40.0% | |
TGGGTGGCTGAAATGATATA+TGG | + | chr2.2:69104708-69104727 | None:intergenic | 40.0% | |
TTACCTCGGCAAATAACTGT+AGG | + | chr2.2:69106343-69106362 | None:intergenic | 40.0% | |
TTACGGTCTTGAGCATCAAT+AGG | + | chr2.2:69106497-69106516 | None:intergenic | 40.0% | |
TTAGTGCAATCAGAAGACTG+AGG | - | chr2.2:69108571-69108590 | MS.gene01425:CDS | 40.0% | |
TTCTCTGTAACAACCAAGTC+TGG | + | chr2.2:69108507-69108526 | None:intergenic | 40.0% | |
TTGATGAACGAAAATGCAGG+AGG | - | chr2.2:69106798-69106817 | MS.gene01425:CDS | 40.0% | |
TTTGCAATTGTCATTCACCG+AGG | - | chr2.2:69105386-69105405 | MS.gene01425:CDS | 40.0% | |
TTTGGTCGGTAATCAGTAAG+AGG | + | chr2.2:69104956-69104975 | None:intergenic | 40.0% | |
! | AATCCAAAACTTGTTCCTGG+AGG | - | chr2.2:69108934-69108953 | MS.gene01425:intron | 40.0% |
! | ACTTTTGCAAATCCACTTGG+AGG | + | chr2.2:69106564-69106583 | None:intergenic | 40.0% |
! | AGACTTGGTTGTTACAGAGA+AGG | - | chr2.2:69108506-69108525 | MS.gene01425:intron | 40.0% |
! | CAATTTTGTGCCAAAGTACG+TGG | + | chr2.2:69109189-69109208 | None:intergenic | 40.0% |
! | CTTATGATTGAAGGTGTGTC+CGG | + | chr2.2:69105256-69105275 | None:intergenic | 40.0% |
! | CTTTTGCAAATCCACTTGGA+GGG | + | chr2.2:69106563-69106582 | None:intergenic | 40.0% |
! | GACTTGGTTGTTACAGAGAA+GGG | - | chr2.2:69108507-69108526 | MS.gene01425:intron | 40.0% |
! | GTCTCAATCTTAGGCTTTGA+AGG | + | chr2.2:69109793-69109812 | None:intergenic | 40.0% |
! | TACGGGTATCAGGGAATTTT+AGG | + | chr2.2:69106041-69106060 | None:intergenic | 40.0% |
! | TTCTTGGTGATTGCAAGATG+TGG | - | chr2.2:69105456-69105475 | MS.gene01425:CDS | 40.0% |
!! | AATGCATGGATTGGCATTGA+TGG | - | chr2.2:69109351-69109370 | MS.gene01425:intron | 40.0% |
!! | ACAACAGTGGGTGTTGATAT+TGG | - | chr2.2:69108180-69108199 | MS.gene01425:intron | 40.0% |
!! | AGGCATCGCAATTTTGTCAA+TGG | + | chr2.2:69106477-69106496 | None:intergenic | 40.0% |
!! | TCTCATCATTTTTGTGCAGC+TGG | - | chr2.2:69106271-69106290 | MS.gene01425:intron | 40.0% |
!! | TGTCTGTTTGGTTCCACTTT+TGG | + | chr2.2:69104182-69104201 | None:intergenic | 40.0% |
!! | TTCTATCGAAGGCATTGAGA+AGG | - | chr2.2:69109005-69109024 | MS.gene01425:intron | 40.0% |
!! | TTGTTTCTGTTCGAGTGAAC+AGG | - | chr2.2:69107764-69107783 | MS.gene01425:intron | 40.0% |
AAAGCCTAAGATTGAGACCG+AGG | - | chr2.2:69109795-69109814 | MS.gene01425:intron | 45.0% | |
AAGCATCTTTAGCATGGACC+TGG | + | chr2.2:69105089-69105108 | None:intergenic | 45.0% | |
AAGCATGCATGCAGCTTCAA+TGG | + | chr2.2:69109713-69109732 | None:intergenic | 45.0% | |
AAGCCTAAGATTGAGACCGA+GGG | - | chr2.2:69109796-69109815 | MS.gene01425:intron | 45.0% | |
AAGCTGCATGCATGCTTCTA+AGG | - | chr2.2:69109716-69109735 | MS.gene01425:intron | 45.0% | |
AGCATCTTTAGCATGGACCT+GGG | + | chr2.2:69105088-69105107 | None:intergenic | 45.0% | |
ATCTCCGACTTCTTCGTCTT+GGG | + | chr2.2:69105922-69105941 | None:intergenic | 45.0% | |
ATCTTTCTCCTCATCTTGCC+AGG | + | chr2.2:69108324-69108343 | None:intergenic | 45.0% | |
ATGCAGGAGGACAAATGTTG+GGG | - | chr2.2:69106811-69106830 | MS.gene01425:CDS | 45.0% | |
ATGCTTCTTGATGCTTCTGG+AGG | - | chr2.2:69105103-69105122 | MS.gene01425:CDS | 45.0% | |
CAATGAAAGCTTCGGCAACA+TGG | + | chr2.2:69106306-69106325 | None:intergenic | 45.0% | |
CATCCTACAGTTATTTGCCG+AGG | - | chr2.2:69106337-69106356 | MS.gene01425:intron | 45.0% | |
CCAGAAAGTTGTGCCTTCAA+AGG | + | chr2.2:69105799-69105818 | None:intergenic | 45.0% | |
CTCCATGCTTGCTCAGATAA+TGG | + | chr2.2:69108551-69108570 | None:intergenic | 45.0% | |
CTGGAGTCTCTTGTTGAAGT+TGG | - | chr2.2:69108434-69108453 | MS.gene01425:intron | 45.0% | |
CTGGGATGCCTATAATGTGA+AGG | - | chr2.2:69109669-69109688 | MS.gene01425:intron | 45.0% | |
GAGGATTCGAGAGTTCTCAA+GGG | - | chr2.2:69108270-69108289 | MS.gene01425:intron | 45.0% | |
GAGTCTCTTGTTGAAGTTGG+AGG | - | chr2.2:69108437-69108456 | MS.gene01425:intron | 45.0% | |
GAGTGGAATCAAGAAGAAGC+AGG | - | chr2.2:69109753-69109772 | MS.gene01425:intron | 45.0% | |
GATGCTTCATCCATGTTCGA+TGG | - | chr2.2:69109063-69109082 | MS.gene01425:intron | 45.0% | |
GCCTATAACGTCACAATGGT+GGG | + | chr2.2:69108022-69108041 | None:intergenic | 45.0% | |
GGGCTTGTAAAAAGCTGCAT+AGG | - | chr2.2:69106831-69106850 | MS.gene01425:intron | 45.0% | |
GGTGCATCATGCTAATATCC+AGG | - | chr2.2:69104917-69104936 | MS.gene01425:CDS | 45.0% | |
GTGAGCAAGAACGCACTATA+TGG | + | chr2.2:69105774-69105793 | None:intergenic | 45.0% | |
GTGCCACCTCCACAAATAAT+CGG | + | chr2.2:69106616-69106635 | None:intergenic | 45.0% | |
TCTTTCTCCTCATCTTGCCA+GGG | + | chr2.2:69108323-69108342 | None:intergenic | 45.0% | |
TGAGGATTCGAGAGTTCTCA+AGG | - | chr2.2:69108269-69108288 | MS.gene01425:intron | 45.0% | |
TGCCATTATCTGAGCAAGCA+TGG | - | chr2.2:69108546-69108565 | MS.gene01425:CDS | 45.0% | |
TGCTAATATCCAGGCGTCAA+AGG | - | chr2.2:69104926-69104945 | MS.gene01425:CDS | 45.0% | |
TTCTTGCTCACGTCCTTTGA+AGG | - | chr2.2:69105783-69105802 | MS.gene01425:intron | 45.0% | |
TTTGTCACAAACCCTCCAAG+TGG | - | chr2.2:69106549-69106568 | MS.gene01425:intron | 45.0% | |
! | AACATGGATGAAGCATCCAC+TGG | + | chr2.2:69109060-69109079 | None:intergenic | 45.0% |
! | ATAAGCGGGCTCTTAACCTT+TGG | - | chr2.2:69104762-69104781 | MS.gene01425:intron | 45.0% |
! | CAACTGTGTTGATGTTAGGG+AGG | - | chr2.2:69107096-69107115 | MS.gene01425:intron | 45.0% |
! | CCTTTGAAGGCACAACTTTC+TGG | - | chr2.2:69105796-69105815 | MS.gene01425:intron | 45.0% |
! | CTGAAACTCTTTTGCATGCC+AGG | - | chr2.2:69108879-69108898 | MS.gene01425:intron | 45.0% |
! | GCACAAATAGTTTGTGGGCT+GGG | - | chr2.2:69106647-69106666 | MS.gene01425:intron | 45.0% |
! | TCCACGCTTTAAATGTGCAG+AGG | - | chr2.2:69104866-69104885 | MS.gene01425:CDS | 45.0% |
! | TCCTCTGCACATTTAAAGCG+TGG | + | chr2.2:69104870-69104889 | None:intergenic | 45.0% |
! | TGCACAAATAGTTTGTGGGC+TGG | - | chr2.2:69106646-69106665 | MS.gene01425:intron | 45.0% |
! | TGTGGTTGTTGTTGACTGGA+AGG | - | chr2.2:69105030-69105049 | MS.gene01425:CDS | 45.0% |
!! | CTGTTGTTTCGTTGAACCAG+TGG | - | chr2.2:69109041-69109060 | MS.gene01425:intron | 45.0% |
!! | CTGTTTGGTTCCACTTTTGG+AGG | + | chr2.2:69104179-69104198 | None:intergenic | 45.0% |
!! | GACTCTTTGAAACGTGAGTC+TGG | - | chr2.2:69104888-69104907 | MS.gene01425:CDS | 45.0% |
!! | GTTGGTGTCATATCAGACAC+CGG | - | chr2.2:69105234-69105253 | MS.gene01425:CDS | 45.0% |
!! | TTTGGTTCCACTTTTGGAGG+AGG | + | chr2.2:69104176-69104195 | None:intergenic | 45.0% |
!!! | ATGCTCTTTTCTCTGAAGCC+TGG | - | chr2.2:69109281-69109300 | MS.gene01425:intron | 45.0% |
AACAAAGATGTGGTTGCCCC+TGG | - | chr2.2:69108303-69108322 | MS.gene01425:intron | 50.0% | |
AACCGAATTGCCAAGGCATG+CGG | - | chr2.2:69108606-69108625 | MS.gene01425:intron | 50.0% | |
AATAACAGCACCGCATGCCT+TGG | + | chr2.2:69108619-69108638 | None:intergenic | 50.0% | |
AGGATGCCATGTCTGTTGCT+AGG | - | chr2.2:69108899-69108918 | MS.gene01425:intron | 50.0% | |
ATCAAGGTTGAGAAGGTCCC+TGG | - | chr2.2:69108237-69108256 | MS.gene01425:intron | 50.0% | |
CAAGACGAAGAAGTCGGAGA+TGG | - | chr2.2:69105921-69105940 | MS.gene01425:intron | 50.0% | |
CATCTCCGACTTCTTCGTCT+TGG | + | chr2.2:69105923-69105942 | None:intergenic | 50.0% | |
CCTTCACGGATCGTCTAAGA+CGG | + | chr2.2:69107995-69108014 | None:intergenic | 50.0% | |
CGTCTTAGACGATCCGTGAA+GGG | - | chr2.2:69107993-69108012 | MS.gene01425:intron | 50.0% | |
CTTGTAGTGCGGTCATTGTC+CGG | + | chr2.2:69109227-69109246 | None:intergenic | 50.0% | |
CTTTCTCCTCATCTTGCCAG+GGG | + | chr2.2:69108322-69108341 | None:intergenic | 50.0% | |
GAACAGACCAGATGAGTTGC+AGG | - | chr2.2:69108641-69108660 | MS.gene01425:intron | 50.0% | |
GAGTTGCAGGAGTCTGATGT+CGG | - | chr2.2:69108654-69108673 | MS.gene01425:intron | 50.0% | |
GCAATGGCAGCAGCTTCATA+TGG | + | chr2.2:69109153-69109172 | None:intergenic | 50.0% | |
GCCCACCATTGTGACGTTAT+AGG | - | chr2.2:69108018-69108037 | MS.gene01425:intron | 50.0% | |
GCCCTATAAACACGCCATTG+CGG | + | chr2.2:69108044-69108063 | None:intergenic | 50.0% | |
GCCGCAATGGCGTGTTTATA+GGG | - | chr2.2:69108040-69108059 | MS.gene01425:intron | 50.0% | |
GGCCTATAACGTCACAATGG+TGG | + | chr2.2:69108023-69108042 | None:intergenic | 50.0% | |
TAGCAACAGACATGGCATCC+TGG | + | chr2.2:69108900-69108919 | None:intergenic | 50.0% | |
TATTGCTCATCCAGCTGCCA+AGG | - | chr2.2:69105695-69105714 | MS.gene01425:intron | 50.0% | |
TCAGACTCCTGCAACTCATC+TGG | + | chr2.2:69108651-69108670 | None:intergenic | 50.0% | |
TCTCCCTCGGTCTCAATCTT+AGG | + | chr2.2:69109802-69109821 | None:intergenic | 50.0% | |
TGCGGCCTATAACGTCACAA+TGG | + | chr2.2:69108026-69108045 | None:intergenic | 50.0% | |
TGTGACGTTATAGGCCGCAA+TGG | - | chr2.2:69108027-69108046 | MS.gene01425:intron | 50.0% | |
TTCGTACAACATTGGGACCC+AGG | - | chr2.2:69105068-69105087 | MS.gene01425:CDS | 50.0% | |
! | CATGCTAACTTGTGCCCCAA+GGG | + | chr2.2:69107833-69107852 | None:intergenic | 50.0% |
! | CCAAAACTTGTTCCTGGAGG+TGG | - | chr2.2:69108937-69108956 | MS.gene01425:intron | 50.0% |
! | CCACCTCCAGGAACAAGTTT+TGG | + | chr2.2:69108940-69108959 | None:intergenic | 50.0% |
! | GAAACGTGAGTCTGGAGCAA+AGG | - | chr2.2:69104896-69104915 | MS.gene01425:CDS | 50.0% |
! | TCATGCTAACTTGTGCCCCA+AGG | + | chr2.2:69107834-69107853 | None:intergenic | 50.0% |
! | TGCTGACATGAAAGAGCGCA+AGG | - | chr2.2:69109389-69109408 | MS.gene01425:intron | 50.0% |
!! | GTGGGTGTTGATATTGGCCA+TGG | - | chr2.2:69108186-69108205 | MS.gene01425:intron | 50.0% |
AGAGGATCACCTTTGACGCC+TGG | + | chr2.2:69104938-69104957 | None:intergenic | 55.0% | |
ATCAAGAAGAAGCAGGCCCC+TGG | - | chr2.2:69109760-69109779 | MS.gene01425:intron | 55.0% | |
ATCTCTGTAGCACCACCTCC+AGG | + | chr2.2:69108952-69108971 | None:intergenic | 55.0% | |
CACCGCATGCCTTGGCAATT+CGG | + | chr2.2:69108611-69108630 | None:intergenic | 55.0% | |
CAGGAGTCTGATGTCGGTAC+TGG | - | chr2.2:69108660-69108679 | MS.gene01425:intron | 55.0% | |
CCGTCTTAGACGATCCGTGA+AGG | - | chr2.2:69107992-69108011 | MS.gene01425:intron | 55.0% | |
CGCACCCAAGACGAAGAAGT+CGG | - | chr2.2:69105915-69105934 | MS.gene01425:intron | 55.0% | |
CGGACAATGACCGCACTACA+AGG | - | chr2.2:69109225-69109244 | MS.gene01425:intron | 55.0% | |
GAGACAAGTACCTTGGCAGC+TGG | + | chr2.2:69105708-69105727 | None:intergenic | 55.0% | |
GGCCGCAATGGCGTGTTTAT+AGG | - | chr2.2:69108039-69108058 | MS.gene01425:intron | 55.0% | |
! | TGGAAGGATTTGCTCGCCGT+CGG | + | chr2.2:69109827-69109846 | None:intergenic | 55.0% |
!! | CAATGGTGGGCATCCCTTCA+CGG | + | chr2.2:69108009-69108028 | None:intergenic | 55.0% |
!! | CTGATGTCGGTACTGGTGCT+GGG | - | chr2.2:69108667-69108686 | MS.gene01425:intron | 55.0% |
!! | TCTGATGTCGGTACTGGTGC+TGG | - | chr2.2:69108666-69108685 | MS.gene01425:intron | 55.0% |
AATCCTCAAGCTGCGCGCCA+GGG | + | chr2.2:69108257-69108276 | None:intergenic | 60.0% | |
GTGCCCCAACTTGTGCCCTT+GGG | - | chr2.2:69107815-69107834 | MS.gene01425:intron | 60.0% | |
TCTGCCATGCCATTCCGCCA+CGG | + | chr2.2:69107961-69107980 | None:intergenic | 60.0% | |
TGCCCCAACTTGTGCCCTTG+GGG | - | chr2.2:69107816-69107835 | MS.gene01425:intron | 60.0% | |
TGGTTGCCCCTGGCAAGATG+AGG | - | chr2.2:69108313-69108332 | MS.gene01425:intron | 60.0% | |
TGTGCCCCAACTTGTGCCCT+TGG | - | chr2.2:69107814-69107833 | MS.gene01425:intron | 60.0% | |
! | CTTTGAAGGGCCTGCTCCAG+GGG | + | chr2.2:69109779-69109798 | None:intergenic | 60.0% |
! | GTGCCCCAAGGGCACAAGTT+GGG | + | chr2.2:69107822-69107841 | None:intergenic | 60.0% |
! | TGCCCCAAGGGCACAAGTTG+GGG | + | chr2.2:69107821-69107840 | None:intergenic | 60.0% |
! | TGTGCCCCAAGGGCACAAGT+TGG | + | chr2.2:69107823-69107842 | None:intergenic | 60.0% |
!! | GCTTTGAAGGGCCTGCTCCA+GGG | + | chr2.2:69109780-69109799 | None:intergenic | 60.0% |
AAGAAGCAGGCCCCTGGAGC+AGG | - | chr2.2:69109766-69109785 | MS.gene01425:intron | 65.0% | |
GAATCCTCAAGCTGCGCGCC+AGG | + | chr2.2:69108258-69108277 | None:intergenic | 65.0% | |
GAGACCGAGGGAGATGCCGA+CGG | - | chr2.2:69109808-69109827 | MS.gene01425:intron | 65.0% | |
!! | GGCTTTGAAGGGCCTGCTCC+AGG | + | chr2.2:69109781-69109800 | None:intergenic | 65.0% |
CTCGCCGTCGGCATCTCCCT+CGG | + | chr2.2:69109815-69109834 | None:intergenic | 70.0% | |
TGATGGCTGTGGCGCTGCCG+TGG | - | chr2.2:69107941-69107960 | MS.gene01425:CDS | 70.0% | |
! | GCTGCCGTGGCGGAATGGCA+TGG | - | chr2.2:69107954-69107973 | MS.gene01425:CDS | 70.0% |
GGTCCCTGGCGCGCAGCTTG+AGG | - | chr2.2:69108251-69108270 | MS.gene01425:intron | 75.0% | |
TGGCTGTGGCGCTGCCGTGG+CGG | - | chr2.2:69107944-69107963 | MS.gene01425:CDS | 75.0% | |
! | GTGGCGCTGCCGTGGCGGAA+TGG | - | chr2.2:69107949-69107968 | MS.gene01425:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 69103796 | 69109852 | 69103796 | ID=MS.gene01425 |
chr2.2 | mRNA | 69103796 | 69109852 | 69103796 | ID=MS.gene01425.t1;Parent=MS.gene01425 |
chr2.2 | exon | 69109828 | 69109852 | 69109828 | ID=MS.gene01425.t1.exon1;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69109828 | 69109852 | 69109828 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69108701 | 69108762 | 69108701 | ID=MS.gene01425.t1.exon2;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69108701 | 69108762 | 69108701 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69108524 | 69108596 | 69108524 | ID=MS.gene01425.t1.exon3;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69108524 | 69108596 | 69108524 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69107932 | 69107999 | 69107932 | ID=MS.gene01425.t1.exon4;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69107932 | 69107999 | 69107932 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69107682 | 69107751 | 69107682 | ID=MS.gene01425.t1.exon5;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69107682 | 69107751 | 69107682 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69107290 | 69107358 | 69107290 | ID=MS.gene01425.t1.exon6;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69107290 | 69107358 | 69107290 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69107136 | 69107207 | 69107136 | ID=MS.gene01425.t1.exon7;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69107136 | 69107207 | 69107136 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69106758 | 69106831 | 69106758 | ID=MS.gene01425.t1.exon8;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69106758 | 69106831 | 69106758 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69104827 | 69105489 | 69104827 | ID=MS.gene01425.t1.exon9;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69104827 | 69105489 | 69104827 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69104622 | 69104747 | 69104622 | ID=MS.gene01425.t1.exon10;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69104622 | 69104747 | 69104622 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69104397 | 69104501 | 69104397 | ID=MS.gene01425.t1.exon11;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69104397 | 69104501 | 69104397 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69104238 | 69104312 | 69104238 | ID=MS.gene01425.t1.exon12;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69104238 | 69104312 | 69104238 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
chr2.2 | exon | 69103796 | 69103981 | 69103796 | ID=MS.gene01425.t1.exon13;Parent=MS.gene01425.t1 |
chr2.2 | CDS | 69103796 | 69103981 | 69103796 | ID=cds.MS.gene01425.t1;Parent=MS.gene01425.t1 |
Gene Sequence |
Protein sequence |