Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008285.01.T01 | XP_024632729.1 | 94.175 | 618 | 36 | 0 | 1 | 618 | 1 | 618 | 0 | 1194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008285.01.T01 | P09189 | 65.913 | 619 | 205 | 5 | 1 | 617 | 1 | 615 | 0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008285.01.T01 | A0A396J8Z6 | 92.369 | 629 | 37 | 1 | 1 | 618 | 1 | 629 | 0.0 | 1183 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002952.01 | MsG0280008285.01 | 0.803188 | 3.927205e-49 | 1.960906e-46 |
| MsG0180003943.01 | MsG0280008285.01 | 0.808565 | 2.910021e-50 | 1.669366e-47 |
| MsG0180004970.01 | MsG0280008285.01 | 0.803659 | 3.137143e-49 | 1.585408e-46 |
| MsG0280006337.01 | MsG0280008285.01 | 0.824063 | 9.889248e-54 | 8.666173e-51 |
| MsG0280008285.01 | MsG0280008615.01 | 0.810799 | 9.629316e-51 | 5.860727e-48 |
| MsG0280008285.01 | MsG0280008909.01 | 0.807350 | 5.277543e-50 | 2.932746e-47 |
| MsG0280008285.01 | MsG0280009514.01 | 0.804569 | 2.028949e-49 | 1.049644e-46 |
| MsG0280008285.01 | MsG0280009748.01 | 0.813738 | 2.198380e-51 | 1.447396e-48 |
| MsG0280008285.01 | MsG0280011282.01 | 0.820307 | 7.349622e-53 | 5.794291e-50 |
| MsG0280008285.01 | MsG0380011648.01 | 0.800214 | 1.600703e-48 | 7.411109e-46 |
| MsG0280008285.01 | MsG0380014289.01 | 0.800036 | 1.740226e-48 | 8.020506e-46 |
| MsG0280008285.01 | MsG0380015677.01 | 0.812830 | 3.480315e-51 | 2.235605e-48 |
| MsG0280008285.01 | MsG0380016200.01 | 0.808103 | 3.650868e-50 | 2.069116e-47 |
| MsG0280008285.01 | MsG0380016517.01 | 0.819129 | 1.365847e-52 | 1.042056e-49 |
| MsG0280008285.01 | MsG0380016703.01 | 0.802276 | 6.058767e-49 | 2.955681e-46 |
| MsG0280008285.01 | MsG0380017195.01 | 0.808615 | 2.838689e-50 | 1.630519e-47 |
| MsG0280008285.01 | MsG0480018586.01 | 0.802066 | 6.690814e-49 | 3.246609e-46 |
| MsG0280008285.01 | MsG0480018861.01 | 0.827646 | 1.394532e-54 | 1.354366e-51 |
| MsG0280008285.01 | MsG0480019922.01 | 0.803461 | 3.448740e-49 | 1.734082e-46 |
| MsG0280008285.01 | MsG0480023835.01 | 0.802411 | 5.683017e-49 | 2.781973e-46 |
| MsG0280008285.01 | MsG0580026002.01 | 0.800511 | 1.392877e-48 | 6.497494e-46 |
| MsG0280008285.01 | MsG0580029640.01 | 0.803805 | 2.924878e-49 | 1.483746e-46 |
| MsG0280008285.01 | MsG0680035346.01 | 0.803273 | 3.771651e-49 | 1.887297e-46 |
| MsG0280008285.01 | MsG0680035475.01 | 0.803053 | 4.188064e-49 | 2.083832e-46 |
| MsG0280008285.01 | MsG0780038386.01 | 0.807109 | 5.935955e-50 | 3.277884e-47 |
| MsG0280008285.01 | MsG0780038602.01 | 0.832676 | 8.252134e-56 | 9.289217e-53 |
| MsG0280008285.01 | MsG0780038603.01 | 0.814907 | 1.213083e-51 | 8.242842e-49 |
| MsG0280008285.01 | MsG0780038803.01 | 0.807184 | 5.720829e-50 | 3.165479e-47 |
| MsG0280008285.01 | MsG0780039252.01 | 0.801191 | 1.011784e-48 | 4.801869e-46 |
| MsG0280008285.01 | MsG0780039655.01 | 0.806970 | 6.351313e-50 | 3.494797e-47 |
| MsG0280008285.01 | MsG0780039737.01 | 0.806387 | 8.431755e-50 | 4.570406e-47 |
| MsG0280008285.01 | MsG0780039866.01 | 0.803069 | 4.155479e-49 | 2.068440e-46 |
| MsG0280008285.01 | MsG0780040488.01 | 0.806958 | 6.386541e-50 | 3.513123e-47 |
| MsG0280008285.01 | MsG0780040669.01 | 0.808763 | 2.639803e-50 | 1.522198e-47 |
| MsG0280008285.01 | MsG0780041667.01 | 0.803656 | 3.141050e-49 | 1.587289e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008285.01.T01 | MTR_2g038270 | 90.096 | 626 | 54 | 1 | 1 | 618 | 1 | 626 | 0.0 | 1146 |
| MsG0280008285.01.T01 | MTR_7g025770 | 81.260 | 619 | 115 | 1 | 1 | 619 | 1 | 618 | 0.0 | 1029 |
| MsG0280008285.01.T01 | MTR_4g079590 | 80.906 | 618 | 117 | 1 | 1 | 618 | 1 | 617 | 0.0 | 1016 |
| MsG0280008285.01.T01 | MTR_2g038260 | 75.444 | 619 | 151 | 1 | 1 | 619 | 1 | 618 | 0.0 | 981 |
| MsG0280008285.01.T01 | MTR_7g026170 | 73.420 | 617 | 163 | 1 | 1 | 617 | 1 | 616 | 0.0 | 936 |
| MsG0280008285.01.T01 | MTR_2g032550 | 71.452 | 620 | 174 | 3 | 1 | 618 | 1 | 619 | 0.0 | 923 |
| MsG0280008285.01.T01 | MTR_5g066800 | 71.815 | 628 | 164 | 3 | 1 | 617 | 1 | 626 | 0.0 | 920 |
| MsG0280008285.01.T01 | MTR_7g029415 | 72.757 | 613 | 165 | 2 | 6 | 618 | 13 | 623 | 0.0 | 912 |
| MsG0280008285.01.T01 | MTR_7g451380 | 71.890 | 619 | 172 | 2 | 1 | 618 | 1 | 618 | 0.0 | 912 |
| MsG0280008285.01.T01 | MTR_7g021440 | 72.240 | 616 | 169 | 2 | 1 | 616 | 1 | 614 | 0.0 | 907 |
| MsG0280008285.01.T01 | MTR_7g026110 | 72.195 | 615 | 167 | 4 | 1 | 615 | 1 | 611 | 0.0 | 903 |
| MsG0280008285.01.T01 | MTR_4g027145 | 70.588 | 629 | 172 | 3 | 1 | 617 | 1 | 628 | 0.0 | 900 |
| MsG0280008285.01.T01 | MTR_7g026130 | 71.405 | 619 | 171 | 4 | 1 | 615 | 1 | 617 | 0.0 | 885 |
| MsG0280008285.01.T01 | MTR_7g026130 | 47.222 | 108 | 46 | 2 | 519 | 615 | 596 | 703 | 7.83e-16 | 81.6 |
| MsG0280008285.01.T01 | MTR_7g026140 | 69.790 | 619 | 170 | 2 | 1 | 619 | 1 | 602 | 0.0 | 881 |
| MsG0280008285.01.T01 | MTR_8g103930 | 70.159 | 630 | 157 | 6 | 1 | 617 | 1 | 612 | 0.0 | 880 |
| MsG0280008285.01.T01 | MTR_2g022050 | 70.598 | 619 | 180 | 2 | 1 | 618 | 1 | 618 | 0.0 | 880 |
| MsG0280008285.01.T01 | MTR_7g011590 | 71.808 | 603 | 155 | 4 | 1 | 603 | 1 | 588 | 0.0 | 878 |
| MsG0280008285.01.T01 | MTR_2g437440 | 68.821 | 619 | 173 | 3 | 1 | 618 | 1 | 600 | 0.0 | 875 |
| MsG0280008285.01.T01 | MTR_1g017130 | 68.174 | 619 | 156 | 4 | 1 | 619 | 1 | 578 | 0.0 | 849 |
| MsG0280008285.01.T01 | MTR_7g074460 | 68.720 | 617 | 173 | 3 | 1 | 617 | 1 | 597 | 0.0 | 836 |
| MsG0280008285.01.T01 | MTR_2g032580 | 66.935 | 620 | 170 | 5 | 1 | 618 | 1 | 587 | 0.0 | 825 |
| MsG0280008285.01.T01 | MTR_7g025720 | 65.359 | 612 | 209 | 3 | 1 | 612 | 1 | 609 | 0.0 | 823 |
| MsG0280008285.01.T01 | MTR_7g007000 | 66.828 | 621 | 159 | 5 | 1 | 619 | 1 | 576 | 0.0 | 819 |
| MsG0280008285.01.T01 | MTR_7g024390 | 65.267 | 619 | 209 | 5 | 1 | 617 | 1 | 615 | 0.0 | 815 |
| MsG0280008285.01.T01 | MTR_7g025760 | 64.274 | 613 | 215 | 4 | 1 | 612 | 1 | 610 | 0.0 | 812 |
| MsG0280008285.01.T01 | MTR_4g063710 | 64.782 | 619 | 212 | 5 | 1 | 617 | 1 | 615 | 0.0 | 809 |
| MsG0280008285.01.T01 | MTR_7g024030 | 65.033 | 612 | 211 | 3 | 1 | 612 | 1 | 609 | 0.0 | 807 |
| MsG0280008285.01.T01 | MTR_7g024580 | 64.136 | 619 | 216 | 5 | 1 | 617 | 1 | 615 | 0.0 | 805 |
| MsG0280008285.01.T01 | MTR_8g032650 | 65.139 | 611 | 210 | 3 | 1 | 611 | 1 | 608 | 0.0 | 805 |
| MsG0280008285.01.T01 | MTR_7g099680 | 64.297 | 619 | 215 | 5 | 1 | 617 | 1 | 615 | 0.0 | 804 |
| MsG0280008285.01.T01 | MTR_7g035155 | 65.751 | 619 | 155 | 6 | 1 | 618 | 1 | 563 | 0.0 | 804 |
| MsG0280008285.01.T01 | MTR_4g063720 | 64.620 | 619 | 213 | 5 | 1 | 617 | 1 | 615 | 0.0 | 803 |
| MsG0280008285.01.T01 | MTR_7g025790 | 64.216 | 612 | 216 | 3 | 1 | 612 | 1 | 609 | 0.0 | 801 |
| MsG0280008285.01.T01 | MTR_7g026090 | 64.553 | 615 | 214 | 3 | 1 | 615 | 1 | 611 | 0.0 | 798 |
| MsG0280008285.01.T01 | MTR_7g026030 | 63.562 | 612 | 220 | 3 | 1 | 612 | 1 | 609 | 0.0 | 795 |
| MsG0280008285.01.T01 | MTR_7g025820 | 66.214 | 589 | 196 | 3 | 1 | 588 | 1 | 587 | 0.0 | 790 |
| MsG0280008285.01.T01 | MTR_7g025620 | 63.235 | 612 | 222 | 3 | 1 | 612 | 1 | 609 | 0.0 | 789 |
| MsG0280008285.01.T01 | MTR_4g130540 | 63.166 | 619 | 221 | 6 | 1 | 617 | 1 | 614 | 0.0 | 789 |
| MsG0280008285.01.T01 | MTR_1g041565 | 66.992 | 615 | 130 | 7 | 6 | 619 | 2 | 544 | 0.0 | 787 |
| MsG0280008285.01.T01 | MTR_7g078190 | 63.415 | 615 | 220 | 5 | 1 | 612 | 1 | 613 | 0.0 | 785 |
| MsG0280008285.01.T01 | MTR_7g451360 | 64.136 | 619 | 161 | 3 | 1 | 618 | 1 | 559 | 0.0 | 783 |
| MsG0280008285.01.T01 | MTR_7g025740 | 61.774 | 620 | 227 | 5 | 1 | 612 | 1 | 618 | 0.0 | 771 |
| MsG0280008285.01.T01 | MTR_7g078210 | 62.843 | 619 | 226 | 4 | 1 | 617 | 1 | 617 | 0.0 | 766 |
| MsG0280008285.01.T01 | MTR_7g025630 | 64.052 | 612 | 203 | 5 | 1 | 612 | 1 | 595 | 0.0 | 763 |
| MsG0280008285.01.T01 | MTR_7g025260 | 61.356 | 590 | 218 | 6 | 31 | 617 | 5 | 587 | 0.0 | 713 |
| MsG0280008285.01.T01 | MTR_6g033850 | 54.604 | 619 | 274 | 6 | 1 | 617 | 1 | 614 | 0.0 | 665 |
| MsG0280008285.01.T01 | MTR_6g033760 | 57.118 | 583 | 244 | 5 | 1 | 581 | 1 | 579 | 0.0 | 659 |
| MsG0280008285.01.T01 | MTR_2g017730 | 54.295 | 617 | 256 | 8 | 6 | 614 | 5 | 603 | 0.0 | 638 |
| MsG0280008285.01.T01 | MTR_6g033870 | 53.409 | 616 | 276 | 7 | 9 | 617 | 10 | 621 | 0.0 | 623 |
| MsG0280008285.01.T01 | MTR_2g032160 | 76.267 | 375 | 89 | 0 | 1 | 375 | 1 | 375 | 0.0 | 616 |
| MsG0280008285.01.T01 | MTR_2g032160 | 56.701 | 97 | 42 | 0 | 521 | 617 | 366 | 462 | 6.48e-26 | 111 |
| MsG0280008285.01.T01 | MTR_6g033820 | 52.160 | 625 | 285 | 8 | 1 | 617 | 1 | 619 | 0.0 | 606 |
| MsG0280008285.01.T01 | MTR_8g099945 | 52.115 | 591 | 270 | 9 | 7 | 592 | 36 | 618 | 0.0 | 605 |
| MsG0280008285.01.T01 | MTR_8g099795 | 52.284 | 591 | 269 | 9 | 7 | 592 | 36 | 618 | 0.0 | 604 |
| MsG0280008285.01.T01 | MTR_6g033955 | 52.435 | 616 | 281 | 7 | 9 | 617 | 9 | 619 | 0.0 | 602 |
| MsG0280008285.01.T01 | MTR_6g033800 | 52.863 | 524 | 242 | 5 | 95 | 617 | 4 | 523 | 0.0 | 544 |
| MsG0280008285.01.T01 | MTR_7g026050 | 72.267 | 375 | 75 | 3 | 245 | 618 | 1 | 347 | 0.0 | 516 |
| MsG0280008285.01.T01 | MTR_4g063720 | 47.819 | 619 | 246 | 11 | 1 | 617 | 1 | 544 | 1.73e-177 | 516 |
| MsG0280008285.01.T01 | MTR_2g040370 | 67.766 | 394 | 123 | 2 | 3 | 396 | 1023 | 1412 | 1.24e-175 | 544 |
| MsG0280008285.01.T01 | MTR_2g040370 | 66.324 | 389 | 126 | 3 | 3 | 390 | 1407 | 1791 | 6.73e-161 | 504 |
| MsG0280008285.01.T01 | MTR_2g040370 | 67.766 | 394 | 123 | 2 | 3 | 396 | 1023 | 1412 | 1.54e-175 | 543 |
| MsG0280008285.01.T01 | MTR_2g040370 | 66.237 | 388 | 126 | 3 | 3 | 389 | 1407 | 1790 | 3.90e-160 | 502 |
| MsG0280008285.01.T01 | MTR_2g040160 | 65.087 | 401 | 135 | 3 | 1 | 400 | 1101 | 1497 | 4.70e-171 | 526 |
| MsG0280008285.01.T01 | MTR_2g040260 | 64.339 | 401 | 138 | 3 | 1 | 400 | 1030 | 1426 | 2.19e-170 | 524 |
| MsG0280008285.01.T01 | MTR_2g040220 | 64.948 | 388 | 132 | 3 | 1 | 386 | 1010 | 1395 | 6.89e-166 | 513 |
| MsG0280008285.01.T01 | MTR_2g040220 | 50.980 | 102 | 42 | 2 | 445 | 538 | 1394 | 1495 | 4.24e-21 | 99.0 |
| MsG0280008285.01.T01 | MTR_2g040350 | 63.119 | 404 | 140 | 4 | 2 | 400 | 813 | 1212 | 1.29e-165 | 506 |
| MsG0280008285.01.T01 | MTR_2g040350 | 63.119 | 404 | 140 | 4 | 2 | 400 | 1031 | 1430 | 5.75e-164 | 506 |
| MsG0280008285.01.T01 | MTR_7g026080 | 89.796 | 245 | 25 | 0 | 1 | 245 | 1 | 245 | 3.52e-162 | 464 |
| MsG0280008285.01.T01 | MTR_1g077230 | 78.369 | 282 | 61 | 0 | 1 | 282 | 1 | 282 | 1.14e-160 | 461 |
| MsG0280008285.01.T01 | MTR_2g010020 | 44.228 | 615 | 309 | 15 | 10 | 614 | 57 | 647 | 1.67e-157 | 468 |
| MsG0280008285.01.T01 | MTR_2g010020 | 44.228 | 615 | 309 | 15 | 10 | 614 | 58 | 648 | 1.72e-157 | 468 |
| MsG0280008285.01.T01 | MTR_4g092920 | 43.598 | 617 | 311 | 16 | 10 | 614 | 54 | 645 | 6.70e-152 | 454 |
| MsG0280008285.01.T01 | MTR_2g005690 | 44.643 | 560 | 288 | 11 | 8 | 561 | 70 | 613 | 7.87e-143 | 431 |
| MsG0280008285.01.T01 | MTR_6g034005 | 44.424 | 547 | 281 | 9 | 82 | 617 | 2 | 536 | 1.38e-137 | 418 |
| MsG0280008285.01.T01 | MTR_4g088515 | 74.502 | 251 | 46 | 1 | 8 | 258 | 275 | 507 | 1.47e-127 | 389 |
| MsG0280008285.01.T01 | MTR_4g088515 | 74.757 | 103 | 25 | 1 | 336 | 438 | 518 | 619 | 1.10e-39 | 154 |
| MsG0280008285.01.T01 | MTR_2g031670 | 76.496 | 234 | 51 | 1 | 21 | 250 | 43 | 276 | 2.99e-126 | 376 |
| MsG0280008285.01.T01 | MTR_2g031670 | 87.931 | 58 | 7 | 0 | 352 | 409 | 283 | 340 | 3.25e-26 | 110 |
| MsG0280008285.01.T01 | MTR_4g092920 | 42.105 | 532 | 274 | 13 | 94 | 614 | 3 | 511 | 1.33e-123 | 376 |
| MsG0280008285.01.T01 | MTR_1g077240 | 61.616 | 297 | 106 | 2 | 322 | 618 | 1 | 289 | 9.31e-112 | 337 |
| MsG0280008285.01.T01 | MTR_6g033810 | 50.156 | 321 | 111 | 2 | 91 | 410 | 13 | 285 | 1.13e-98 | 303 |
| MsG0280008285.01.T01 | MTR_6g033855 | 43.700 | 373 | 124 | 4 | 91 | 463 | 13 | 299 | 3.22e-93 | 290 |
| MsG0280008285.01.T01 | MTR_5g097190 | 58.268 | 254 | 59 | 3 | 3 | 256 | 152 | 358 | 4.34e-92 | 289 |
| MsG0280008285.01.T01 | MTR_6g478100 | 67.453 | 212 | 55 | 2 | 38 | 249 | 10 | 207 | 4.89e-92 | 287 |
| MsG0280008285.01.T01 | MTR_6g478100 | 58.333 | 96 | 40 | 0 | 516 | 611 | 208 | 303 | 8.37e-27 | 111 |
| MsG0280008285.01.T01 | MTR_7g074540 | 61.881 | 202 | 76 | 1 | 418 | 619 | 1 | 201 | 1.57e-77 | 245 |
| MsG0280008285.01.T01 | MTR_4g012050 | 32.189 | 466 | 288 | 7 | 10 | 451 | 4 | 465 | 2.12e-75 | 258 |
| MsG0280008285.01.T01 | MTR_5g006180 | 31.703 | 511 | 313 | 13 | 9 | 505 | 29 | 517 | 4.78e-74 | 248 |
| MsG0280008285.01.T01 | MTR_2g102180 | 32.414 | 435 | 278 | 6 | 10 | 432 | 4 | 434 | 1.56e-73 | 253 |
| MsG0280008285.01.T01 | MTR_1g116250 | 50.185 | 271 | 94 | 3 | 348 | 618 | 60 | 289 | 3.42e-73 | 237 |
| MsG0280008285.01.T01 | MTR_1207s0010 | 61.714 | 175 | 66 | 1 | 109 | 283 | 2 | 175 | 7.37e-69 | 221 |
| MsG0280008285.01.T01 | MTR_3g051300 | 31.754 | 422 | 279 | 6 | 10 | 429 | 4 | 418 | 2.85e-68 | 237 |
| MsG0280008285.01.T01 | MTR_5g092570 | 31.767 | 447 | 293 | 7 | 10 | 451 | 4 | 443 | 1.14e-66 | 232 |
| MsG0280008285.01.T01 | MTR_7g026180 | 84.874 | 119 | 18 | 0 | 78 | 196 | 23 | 141 | 1.07e-64 | 216 |
| MsG0280008285.01.T01 | MTR_7g026180 | 47.222 | 216 | 84 | 2 | 402 | 617 | 144 | 329 | 3.89e-49 | 174 |
| MsG0280008285.01.T01 | MTR_7g451390 | 57.143 | 182 | 78 | 0 | 437 | 618 | 9 | 190 | 3.80e-64 | 209 |
| MsG0280008285.01.T01 | MTR_4g115780 | 32.885 | 520 | 316 | 15 | 9 | 504 | 140 | 650 | 1.14e-63 | 223 |
| MsG0280008285.01.T01 | MTR_5g090110 | 29.960 | 494 | 303 | 12 | 9 | 489 | 28 | 491 | 1.52e-62 | 216 |
| MsG0280008285.01.T01 | MTR_4g107920 | 30.814 | 516 | 299 | 19 | 10 | 497 | 21 | 506 | 1.47e-57 | 203 |
| MsG0280008285.01.T01 | MTR_3g081170 | 27.308 | 520 | 336 | 12 | 11 | 495 | 28 | 540 | 6.92e-57 | 206 |
| MsG0280008285.01.T01 | MTR_5g005870 | 39.024 | 287 | 164 | 6 | 299 | 581 | 69 | 348 | 3.12e-51 | 182 |
| MsG0280008285.01.T01 | MTR_6g033910 | 44.796 | 221 | 71 | 3 | 67 | 285 | 12 | 183 | 5.22e-51 | 174 |
| MsG0280008285.01.T01 | MTR_1g068900 | 60.417 | 144 | 54 | 2 | 428 | 569 | 23 | 165 | 4.26e-49 | 169 |
| MsG0280008285.01.T01 | MTR_2g040355 | 32.168 | 429 | 131 | 11 | 189 | 617 | 2 | 270 | 3.71e-46 | 165 |
| MsG0280008285.01.T01 | MTR_5g005890 | 37.004 | 227 | 92 | 4 | 74 | 299 | 5 | 181 | 7.97e-37 | 136 |
| MsG0280008285.01.T01 | MTR_4g027235 | 72.000 | 75 | 21 | 0 | 1 | 75 | 1 | 75 | 3.70e-33 | 122 |
| MsG0280008285.01.T01 | MTR_4g027085 | 72.000 | 75 | 21 | 0 | 1 | 75 | 1 | 75 | 3.70e-33 | 122 |
| MsG0280008285.01.T01 | MTR_7g026095 | 63.736 | 91 | 33 | 0 | 483 | 573 | 256 | 346 | 1.33e-30 | 123 |
| MsG0280008285.01.T01 | MTR_7g026095 | 55.056 | 89 | 24 | 2 | 87 | 175 | 188 | 260 | 2.34e-21 | 96.3 |
| MsG0280008285.01.T01 | MTR_7g026190 | 53.465 | 101 | 38 | 2 | 281 | 381 | 2 | 93 | 5.49e-28 | 112 |
| MsG0280008285.01.T01 | MTR_7g026190 | 47.541 | 122 | 54 | 3 | 499 | 617 | 94 | 208 | 2.18e-21 | 93.2 |
| MsG0280008285.01.T01 | MTR_2g017710 | 33.333 | 261 | 83 | 8 | 225 | 480 | 17 | 191 | 4.94e-25 | 105 |
| MsG0280008285.01.T01 | MTR_6g033805 | 61.644 | 73 | 26 | 1 | 1 | 73 | 1 | 71 | 2.16e-22 | 91.7 |
| MsG0280008285.01.T01 | MTR_4g115860 | 45.161 | 93 | 49 | 2 | 397 | 488 | 29 | 120 | 6.49e-18 | 80.5 |
| MsG0280008285.01.T01 | MTR_3g114370 | 42.568 | 148 | 44 | 2 | 473 | 619 | 3 | 110 | 8.15e-17 | 77.0 |
| MsG0280008285.01.T01 | MTR_7g021430 | 49.296 | 71 | 36 | 0 | 215 | 285 | 1 | 71 | 1.46e-16 | 79.0 |
| MsG0280008285.01.T01 | MTR_3g114360 | 50.000 | 90 | 29 | 2 | 451 | 540 | 192 | 265 | 2.09e-12 | 68.2 |
| MsG0280008285.01.T01 | MTR_7g026160 | 36.975 | 119 | 49 | 4 | 298 | 390 | 72 | 190 | 2.37e-11 | 64.7 |
| MsG0280008285.01.T01 | MTR_7g025680 | 77.419 | 31 | 7 | 0 | 8 | 38 | 8 | 38 | 3.49e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008285.01.T01 | AT3G12580 | 64.943 | 619 | 211 | 5 | 1 | 617 | 1 | 615 | 0.0 | 813 |
| MsG0280008285.01.T01 | AT5G02500 | 64.459 | 619 | 214 | 5 | 1 | 617 | 1 | 615 | 0.0 | 806 |
| MsG0280008285.01.T01 | AT5G02490 | 63.328 | 619 | 221 | 5 | 1 | 617 | 1 | 615 | 0.0 | 791 |
| MsG0280008285.01.T01 | AT3G09440 | 63.005 | 619 | 223 | 5 | 1 | 617 | 1 | 615 | 0.0 | 785 |
| MsG0280008285.01.T01 | AT3G09440 | 63.005 | 619 | 223 | 5 | 1 | 617 | 1 | 615 | 0.0 | 785 |
| MsG0280008285.01.T01 | AT3G09440 | 63.005 | 619 | 223 | 5 | 1 | 617 | 1 | 615 | 0.0 | 785 |
| MsG0280008285.01.T01 | AT3G09440 | 63.005 | 619 | 223 | 5 | 1 | 617 | 1 | 615 | 0.0 | 785 |
| MsG0280008285.01.T01 | AT1G16030 | 63.005 | 619 | 222 | 6 | 1 | 617 | 1 | 614 | 0.0 | 782 |
| MsG0280008285.01.T01 | AT1G56410 | 63.166 | 619 | 220 | 6 | 1 | 617 | 1 | 613 | 0.0 | 774 |
| MsG0280008285.01.T01 | AT5G28540 | 51.876 | 613 | 283 | 9 | 7 | 615 | 35 | 639 | 0.0 | 620 |
| MsG0280008285.01.T01 | AT5G42020 | 51.713 | 613 | 284 | 9 | 7 | 615 | 35 | 639 | 0.0 | 618 |
| MsG0280008285.01.T01 | AT5G42020 | 51.713 | 613 | 284 | 9 | 7 | 615 | 40 | 644 | 0.0 | 617 |
| MsG0280008285.01.T01 | AT1G09080 | 53.741 | 588 | 262 | 7 | 7 | 591 | 50 | 630 | 0.0 | 602 |
| MsG0280008285.01.T01 | AT1G09080 | 53.741 | 588 | 262 | 7 | 7 | 591 | 40 | 620 | 0.0 | 602 |
| MsG0280008285.01.T01 | AT5G02500 | 73.522 | 389 | 101 | 1 | 1 | 389 | 1 | 387 | 0.0 | 602 |
| MsG0280008285.01.T01 | AT5G42020 | 51.494 | 569 | 242 | 12 | 7 | 555 | 35 | 589 | 0.0 | 546 |
| MsG0280008285.01.T01 | AT5G09590 | 45.961 | 557 | 278 | 12 | 10 | 560 | 60 | 599 | 2.62e-147 | 442 |
| MsG0280008285.01.T01 | AT4G37910 | 45.781 | 557 | 279 | 11 | 10 | 560 | 55 | 594 | 3.84e-145 | 436 |
| MsG0280008285.01.T01 | AT4G37910 | 45.781 | 557 | 279 | 11 | 10 | 560 | 55 | 594 | 3.84e-145 | 436 |
| MsG0280008285.01.T01 | AT4G24280 | 44.286 | 560 | 290 | 11 | 8 | 561 | 79 | 622 | 2.43e-143 | 433 |
| MsG0280008285.01.T01 | AT5G49910 | 44.643 | 560 | 288 | 11 | 8 | 561 | 79 | 622 | 8.38e-143 | 432 |
| MsG0280008285.01.T01 | AT2G32120 | 34.109 | 516 | 303 | 14 | 9 | 508 | 30 | 524 | 7.83e-81 | 266 |
| MsG0280008285.01.T01 | AT2G32120 | 34.109 | 516 | 303 | 14 | 9 | 508 | 30 | 524 | 7.83e-81 | 266 |
| MsG0280008285.01.T01 | AT1G79930 | 32.129 | 498 | 299 | 9 | 10 | 475 | 4 | 494 | 4.37e-77 | 261 |
| MsG0280008285.01.T01 | AT1G79930 | 32.129 | 498 | 299 | 9 | 10 | 475 | 4 | 494 | 9.95e-77 | 261 |
| MsG0280008285.01.T01 | AT1G79920 | 31.727 | 498 | 301 | 8 | 10 | 475 | 4 | 494 | 5.44e-76 | 257 |
| MsG0280008285.01.T01 | AT1G79920 | 31.727 | 498 | 301 | 8 | 10 | 475 | 4 | 494 | 5.79e-76 | 257 |
| MsG0280008285.01.T01 | AT1G79920 | 31.727 | 498 | 301 | 8 | 10 | 475 | 4 | 494 | 5.79e-76 | 257 |
| MsG0280008285.01.T01 | AT1G79920 | 31.727 | 498 | 301 | 8 | 10 | 475 | 4 | 494 | 5.79e-76 | 257 |
| MsG0280008285.01.T01 | AT1G11660 | 34.063 | 411 | 263 | 6 | 10 | 417 | 4 | 409 | 1.52e-72 | 248 |
| MsG0280008285.01.T01 | AT1G11660 | 34.063 | 411 | 263 | 6 | 10 | 417 | 4 | 409 | 1.52e-72 | 248 |
| MsG0280008285.01.T01 | AT1G11660 | 34.063 | 411 | 263 | 6 | 10 | 417 | 4 | 409 | 1.52e-72 | 248 |
| MsG0280008285.01.T01 | AT1G11660 | 34.400 | 375 | 240 | 4 | 46 | 417 | 1 | 372 | 2.75e-66 | 231 |
| MsG0280008285.01.T01 | AT4G16660 | 26.908 | 524 | 342 | 12 | 6 | 495 | 47 | 563 | 2.13e-58 | 211 |
| MsG0280008285.01.T01 | AT4G16660 | 26.908 | 524 | 342 | 12 | 6 | 495 | 23 | 539 | 2.18e-58 | 211 |
Find 143 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAATAGTTCCTGCACTTT+TGG | 0.163788 | 2:-28636675 | None:intergenic |
| GGAGATTGCAGAGGCTTATT+TGG | 0.170727 | 2:+28636023 | MsG0280008285.01.T01:CDS |
| ATGGATGCTGGTGCCATTGC+TGG | 0.234093 | 2:+28636114 | MsG0280008285.01.T01:CDS |
| CCTGATGAGGCTGTTGCTTA+TGG | 0.243454 | 2:+28636738 | MsG0280008285.01.T01:CDS |
| GTGTCTCTCCTCACAATTAA+AGG | 0.259274 | 2:+28636264 | MsG0280008285.01.T01:CDS |
| TCAGATGCTAAGAGGTTAAT+TGG | 0.263493 | 2:+28635838 | MsG0280008285.01.T01:intron |
| TTTGAAGTTAAAGCCACTTC+TGG | 0.288192 | 2:+28636294 | MsG0280008285.01.T01:CDS |
| AAGGACACTCTCTTTCAAAT+TGG | 0.288998 | 2:+28636458 | MsG0280008285.01.T01:CDS |
| AAAAGACTGTAACCATGATT+TGG | 0.304159 | 2:+28637657 | MsG0280008285.01.T01:three_prime_UTR |
| TATCTTTAAGAGTAAGATAT+TGG | 0.306908 | 2:-28636923 | None:intergenic |
| ACTTTGTGCAAGAATTTAAT+AGG | 0.318140 | 2:+28636364 | MsG0280008285.01.T01:CDS |
| CTTCAATCAAGGCACTATAT+TGG | 0.324611 | 2:-28636947 | None:intergenic |
| ATGACTGCATTTACAAGTTA+AGG | 0.328913 | 2:+28637270 | MsG0280008285.01.T01:CDS |
| AAGGAATGCTCTAAAGAATA+AGG | 0.330434 | 2:+28637289 | MsG0280008285.01.T01:CDS |
| TCTTCATACACTCATTAAAA+AGG | 0.345773 | 2:-28636569 | None:intergenic |
| CTCAGCCTCCTCAAGGCTCT+TGG | 0.347374 | 2:-28636414 | None:intergenic |
| GGATAACCTTTCTTTGTCAT+TGG | 0.352083 | 2:-28637153 | None:intergenic |
| AACGCACAAAACACCGTCTT+TGG | 0.355144 | 2:+28634282 | MsG0280008285.01.T01:CDS |
| TGGCCGTTCAAGGTTATTGC+TGG | 0.368855 | 2:+28635904 | MsG0280008285.01.T01:CDS |
| CTGATGAGGCTGTTGCTTAT+GGG | 0.384178 | 2:+28636739 | MsG0280008285.01.T01:CDS |
| CATATTCATGTGTTGGTGTT+TGG | 0.387460 | 2:+28634133 | MsG0280008285.01.T01:CDS |
| ACGTCTCGCAGCACCAAGTT+TGG | 0.390269 | 2:-28636807 | None:intergenic |
| CCATAAGCAACAGCCTCATC+AGG | 0.390857 | 2:-28636738 | None:intergenic |
| CATTAAGAATGTTCCAAACT+TGG | 0.400175 | 2:+28636794 | MsG0280008285.01.T01:CDS |
| CTGAGATACCAAGTGACAAT+GGG | 0.427519 | 2:-28636833 | None:intergenic |
| TCATTACCTTGGCCTTCCTT+AGG | 0.431184 | 2:-28637238 | None:intergenic |
| TATATTGTTGTGGCCGTTCA+AGG | 0.432647 | 2:+28635894 | MsG0280008285.01.T01:CDS |
| AAAGACTGTAACCATGATTT+GGG | 0.440828 | 2:+28637658 | MsG0280008285.01.T01:three_prime_UTR |
| TGCCTTGATTGAAGTTTATG+AGG | 0.441002 | 2:+28636956 | MsG0280008285.01.T01:CDS |
| CAAGTTTGAAGAAATCAATA+TGG | 0.446500 | 2:+28636545 | MsG0280008285.01.T01:CDS |
| CTATTGCGTAACTTCTTCAA+TGG | 0.452833 | 2:+28636690 | MsG0280008285.01.T01:CDS |
| TTGTCTTTGATCTTGGTGGT+GGG | 0.456314 | 2:+28636232 | MsG0280008285.01.T01:CDS |
| TGATTATCCTCACAACGTTA+AGG | 0.457564 | 2:-28636137 | None:intergenic |
| TTTGTCTTTGATCTTGGTGG+TGG | 0.458128 | 2:+28636231 | MsG0280008285.01.T01:CDS |
| GGAATTTCTCATCTTCATCA+TGG | 0.469683 | 2:-28637217 | None:intergenic |
| TATTGGTTTGTCTTCTTGAA+AGG | 0.474308 | 2:-28636906 | None:intergenic |
| ACTGCTGCAGCTATTGCATA+TGG | 0.476452 | 2:+28636168 | MsG0280008285.01.T01:CDS |
| CTTCTGGAAACACTCACCTC+GGG | 0.477285 | 2:+28636310 | MsG0280008285.01.T01:CDS |
| TGTTCCTCGTGGCCATCCCT+TGG | 0.477913 | 2:+28637043 | MsG0280008285.01.T01:CDS |
| TCATGAGTGTGGTGATTCCT+AGG | 0.481401 | 2:+28636871 | MsG0280008285.01.T01:CDS |
| TATTGCGTAACTTCTTCAAT+GGG | 0.481757 | 2:+28636691 | MsG0280008285.01.T01:CDS |
| CAAGATTGGCATGGTAATGT+TGG | 0.483132 | 2:-28637630 | None:intergenic |
| TTCTTGAGGATCATCTGAAA+GGG | 0.487611 | 2:+28637417 | MsG0280008285.01.T01:CDS |
| TTGAAGTTTATGAGGGTGAG+AGG | 0.487743 | 2:+28636964 | MsG0280008285.01.T01:CDS |
| TTCTTGTCGGTGGCTCGTCT+AGG | 0.487944 | 2:+28636649 | MsG0280008285.01.T01:CDS |
| ATCTAATGCATTCATTACCT+TGG | 0.490089 | 2:-28637249 | None:intergenic |
| GTACATGATATTGTTCTTGT+CGG | 0.498157 | 2:+28636636 | MsG0280008285.01.T01:CDS |
| TGAGAATCGTTAAAATAAGC+AGG | 0.500441 | 2:-28636078 | None:intergenic |
| GGATGGCCACGAGGAACACT+TGG | 0.501644 | 2:-28637038 | None:intergenic |
| TTCATGTGTTGGTGTTTGGT+TGG | 0.501933 | 2:+28634137 | MsG0280008285.01.T01:CDS |
| CGAAAAGCCACCATGGATGC+TGG | 0.502548 | 2:+28636102 | MsG0280008285.01.T01:CDS |
| TTTCACTGATGCTCAAAGGT+TGG | 0.504490 | 2:+28634227 | MsG0280008285.01.T01:CDS |
| ACGAGGAACACTTGGAAGAC+CGG | 0.508128 | 2:-28637030 | None:intergenic |
| GTTGGTCGGTGGTGCTGCTA+AGG | 0.508209 | 2:+28634245 | MsG0280008285.01.T01:CDS |
| GAGATTATCCACAACGATGA+AGG | 0.511349 | 2:+28634177 | MsG0280008285.01.T01:CDS |
| GCGAGGGACAACAACGTGCT+TGG | 0.514694 | 2:+28636993 | MsG0280008285.01.T01:CDS |
| TAACAAGAGTGCCCAAATCA+TGG | 0.522095 | 2:-28637669 | None:intergenic |
| TGATGAGGCTGTTGCTTATG+GGG | 0.522303 | 2:+28636740 | MsG0280008285.01.T01:CDS |
| AAAATTGATTCAAGAAGCTA+AGG | 0.522479 | 2:+28637190 | MsG0280008285.01.T01:CDS |
| TGCTTTGCTATCGATGAAAA+CGG | 0.522627 | 2:+28637071 | MsG0280008285.01.T01:CDS |
| TTGCTTTCACTGATGCTCAA+AGG | 0.524988 | 2:+28634223 | MsG0280008285.01.T01:CDS |
| ATGCTAAGAGGTTAATTGGT+AGG | 0.525498 | 2:+28635842 | MsG0280008285.01.T01:CDS |
| CGATAACCAATGACAAAGAA+AGG | 0.526916 | 2:+28637147 | MsG0280008285.01.T01:CDS |
| GTCTAGGATTCCAAAAGTGC+AGG | 0.532443 | 2:+28636665 | MsG0280008285.01.T01:CDS |
| ACTAGCCAGTCTTGATTACA+AGG | 0.537318 | 2:-28637460 | None:intergenic |
| GAGGTGAGTGTTTCCAGAAG+TGG | 0.537456 | 2:-28636307 | None:intergenic |
| AAAGGTACAGAAGTGTTCCT+AGG | 0.538214 | 2:-28636888 | None:intergenic |
| AGCAATGGCACCAGCATCCA+TGG | 0.539868 | 2:-28636112 | None:intergenic |
| GACGTTACCCCATTGTCACT+TGG | 0.546373 | 2:+28636825 | MsG0280008285.01.T01:CDS |
| TCAGTGAAAGCAACAAAAGA+AGG | 0.546424 | 2:-28634213 | None:intergenic |
| CGTGCAGTGGGAATCGACCT+TGG | 0.550120 | 2:+28634105 | MsG0280008285.01.T01:CDS |
| TGAAGTTTATGAGGGTGAGA+GGG | 0.550868 | 2:+28636965 | MsG0280008285.01.T01:CDS |
| AGAGGCTTATTTGGAATCAC+CGG | 0.553942 | 2:+28636032 | MsG0280008285.01.T01:CDS |
| ACCCTCATAAACTTCAATCA+AGG | 0.556937 | 2:-28636958 | None:intergenic |
| TCAGCAGAGGAAAGATCCAC+TGG | 0.557101 | 2:+28637107 | MsG0280008285.01.T01:CDS |
| GTTCTTGAGGATCATCTGAA+AGG | 0.557323 | 2:+28637416 | MsG0280008285.01.T01:CDS |
| GATCTCATTCTTACTTCCAG+TGG | 0.560329 | 2:-28637123 | None:intergenic |
| GAAAGGGCTTGAGAGTATGT+TGG | 0.565506 | 2:+28637433 | MsG0280008285.01.T01:CDS |
| GAACACCTTGTAATCAAGAC+TGG | 0.565696 | 2:+28637455 | MsG0280008285.01.T01:CDS |
| AAACATGAAGGTCGTGCAGT+GGG | 0.567739 | 2:+28634093 | MsG0280008285.01.T01:CDS |
| GATTGTTGAAAGTTGTCTTG+TGG | 0.568361 | 2:+28636590 | MsG0280008285.01.T01:CDS |
| ATGAAGATGAGAAATTCCTA+AGG | 0.570324 | 2:+28637222 | MsG0280008285.01.T01:CDS |
| CAATCTCCTTCATGTTTGTG+AGG | 0.570747 | 2:-28636008 | None:intergenic |
| GCGTAACTTCTTCAATGGGA+AGG | 0.571597 | 2:+28636695 | MsG0280008285.01.T01:CDS |
| TACGATTAGTGTTAAGTACA+AGG | 0.571844 | 2:+28635942 | MsG0280008285.01.T01:CDS |
| GGGTGAGAGGGCAAGAGCGA+GGG | 0.576169 | 2:+28636977 | MsG0280008285.01.T01:CDS |
| TAGTGTTAAGTACAAGGGTG+AGG | 0.581461 | 2:+28635948 | MsG0280008285.01.T01:CDS |
| ACTGATGCTCAAAGGTTGGT+CGG | 0.583319 | 2:+28634231 | MsG0280008285.01.T01:CDS |
| ACTTCTGGAAACACTCACCT+CGG | 0.583908 | 2:+28636309 | MsG0280008285.01.T01:CDS |
| TTGCTGGCCTTAACGTTGTG+AGG | 0.589688 | 2:+28636130 | MsG0280008285.01.T01:CDS |
| GAATAGAAATATACCAAAGA+CGG | 0.590465 | 2:-28634295 | None:intergenic |
| TTGTACTTAACACTAATCGT+AGG | 0.591476 | 2:-28635940 | None:intergenic |
| GCCTTGATTGAAGTTTATGA+GGG | 0.593761 | 2:+28636957 | MsG0280008285.01.T01:CDS |
| ATATGCAATAGCTGCAGCAG+TGG | 0.594040 | 2:-28636166 | None:intergenic |
| GCTGAGATACCAAGTGACAA+TGG | 0.594285 | 2:-28636834 | None:intergenic |
| AGGGTGAGAGGGCAAGAGCG+AGG | 0.595717 | 2:+28636976 | MsG0280008285.01.T01:CDS |
| TTTACTTCATAAGAATAACC+AGG | 0.597327 | 2:+28637379 | MsG0280008285.01.T01:CDS |
| CTTCATGTTTGTGAGGACAA+TGG | 0.600128 | 2:-28636001 | None:intergenic |
| AGAACAAAGTGGATATCACT+AGG | 0.600332 | 2:+28636388 | MsG0280008285.01.T01:CDS |
| AGATGAGAAATTCCTAAGGA+AGG | 0.601503 | 2:+28637226 | MsG0280008285.01.T01:CDS |
| TATGCAATAGCTGCAGCAGT+GGG | 0.602359 | 2:-28636165 | None:intergenic |
| GACAATGGATGAGATTTCCT+CGG | 0.602552 | 2:-28635986 | None:intergenic |
| CACATGAATATGTTGTTCCA+AGG | 0.603031 | 2:-28634122 | None:intergenic |
| CATTGTCCTCACAAACATGA+AGG | 0.603324 | 2:+28636002 | MsG0280008285.01.T01:CDS |
| GATAGCAAAGCATACATCCA+AGG | 0.607442 | 2:-28637060 | None:intergenic |
| CACAACGTTAAGGCCAGCAA+TGG | 0.608818 | 2:-28636127 | None:intergenic |
| CATGATATTGTTCTTGTCGG+TGG | 0.608819 | 2:+28636639 | MsG0280008285.01.T01:CDS |
| ATTTAATAGGAAGAACAAAG+TGG | 0.609345 | 2:+28636377 | MsG0280008285.01.T01:CDS |
| GGAACAACATATTCATGTGT+TGG | 0.609685 | 2:+28634126 | MsG0280008285.01.T01:CDS |
| AGACATCACCTTTAATTGTG+AGG | 0.611395 | 2:-28636272 | None:intergenic |
| CATCTTAACTGTTTCAGCAG+AGG | 0.613572 | 2:+28637094 | MsG0280008285.01.T01:CDS |
| ACACCAGCAATAACCTTGAA+CGG | 0.614534 | 2:-28635907 | None:intergenic |
| TAATGAAGTAGATGTTCTTG+AGG | 0.618161 | 2:+28637403 | MsG0280008285.01.T01:CDS |
| ATAGCAAAGCATACATCCAA+GGG | 0.619096 | 2:-28637059 | None:intergenic |
| TTCTCAGCGAAAAGCCACCA+TGG | 0.620029 | 2:+28636095 | MsG0280008285.01.T01:CDS |
| AAAACATGAAGGTCGTGCAG+TGG | 0.622170 | 2:+28634092 | MsG0280008285.01.T01:CDS |
| TTCTGGAAACACTCACCTCG+GGG | 0.622900 | 2:+28636311 | MsG0280008285.01.T01:CDS |
| TAAATAATCAATCTCAATAG+CGG | 0.625695 | 2:-28636484 | None:intergenic |
| CAAGCTGCTGTGTTGAGTGA+AGG | 0.627003 | 2:+28636771 | MsG0280008285.01.T01:CDS |
| CAAAGCATACATCCAAGGGA+TGG | 0.629656 | 2:-28637055 | None:intergenic |
| GAACATCTACTTCATTACCC+TGG | 0.629974 | 2:-28637397 | None:intergenic |
| AGAAGTTCTCAGCCTCCTCA+AGG | 0.633276 | 2:-28636421 | None:intergenic |
| CATAAGCAACAGCCTCATCA+GGG | 0.640869 | 2:-28636737 | None:intergenic |
| AGGTTGGACAAAATTTGCAG+TGG | 0.644500 | 2:+28637568 | MsG0280008285.01.T01:three_prime_UTR |
| TTACTTCATAAGAATAACCA+GGG | 0.647440 | 2:+28637380 | MsG0280008285.01.T01:CDS |
| GGAGAAGCTCCTTTGTGCCG+AGG | 0.650523 | 2:+28635969 | MsG0280008285.01.T01:CDS |
| GACAAAAGAAGTAATTGTGA+TGG | 0.650690 | 2:+28636195 | MsG0280008285.01.T01:CDS |
| ATGAGATTTCCTCGGCACAA+AGG | 0.653122 | 2:-28635978 | None:intergenic |
| CTAGGAATCCAAGAGCCTTG+AGG | 0.655232 | 2:+28636406 | MsG0280008285.01.T01:CDS |
| GGAATCCAAGAGCCTTGAGG+AGG | 0.655761 | 2:+28636409 | MsG0280008285.01.T01:CDS |
| CAAGAGCATCAACCCTGATG+AGG | 0.657948 | 2:+28636725 | MsG0280008285.01.T01:CDS |
| GAAATTCCTAAGGAAGGCCA+AGG | 0.662766 | 2:+28637232 | MsG0280008285.01.T01:CDS |
| GATCAATCGTGCAATAACTG+TGG | 0.674376 | 2:+28637349 | MsG0280008285.01.T01:CDS |
| ACGATTAGTGTTAAGTACAA+GGG | 0.676520 | 2:+28635943 | MsG0280008285.01.T01:CDS |
| TGAGATTGATTATTTATACG+AGG | 0.683216 | 2:+28636491 | MsG0280008285.01.T01:CDS |
| AAACATGAAGGAGATTGCAG+AGG | 0.695775 | 2:+28636014 | MsG0280008285.01.T01:CDS |
| TAATGATCGCATCATGAGTG+TGG | 0.701776 | 2:+28636860 | MsG0280008285.01.T01:CDS |
| ACATCCAAGGGATGGCCACG+AGG | 0.704531 | 2:-28637047 | None:intergenic |
| GATGCTCAAAGGTTGGTCGG+TGG | 0.706549 | 2:+28634234 | MsG0280008285.01.T01:CDS |
| GGTCTTCCAAGTGTTCCTCG+TGG | 0.707924 | 2:+28637032 | MsG0280008285.01.T01:CDS |
| TGAGATACCAAGTGACAATG+GGG | 0.709556 | 2:-28636832 | None:intergenic |
| TCTGGAAACACTCACCTCGG+GGG | 0.720115 | 2:+28636312 | MsG0280008285.01.T01:CDS |
| AATGGCACCAGCATCCATGG+TGG | 0.736459 | 2:-28636109 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATTAAAAAAAATA+GGG | + | Chr2:28634966-28634985 | MsG0280008285.01.T01:intron | 0.0% |
| !! | TATTAAAAATTAAAAAAAAT+AGG | + | Chr2:28634965-28634984 | MsG0280008285.01.T01:intron | 0.0% |
| !! | AATATTAATTAGAGTTATAA+AGG | - | Chr2:28634507-28634526 | None:intergenic | 10.0% |
| !! | ATATTAATTAGAGTTATAAA+GGG | - | Chr2:28634506-28634525 | None:intergenic | 10.0% |
| !!! | CAATTTTTAAATTGTTAAAT+TGG | - | Chr2:28635121-28635140 | None:intergenic | 10.0% |
| !! | ATAGATGGATAAATAAATAA+AGG | + | Chr2:28635543-28635562 | MsG0280008285.01.T01:intron | 15.0% |
| !! | ATGAATTAATATATATGTAG+CGG | + | Chr2:28635669-28635688 | MsG0280008285.01.T01:intron | 15.0% |
| !! | TAAAGAAAAACAATTTCTTT+GGG | - | Chr2:28635347-28635366 | None:intergenic | 15.0% |
| !! | TAAGAAAAATGTATAAATGA+AGG | - | Chr2:28634626-28634645 | None:intergenic | 15.0% |
| !! | TATTGTATTGAAAAATGAAA+TGG | - | Chr2:28634471-28634490 | None:intergenic | 15.0% |
| !!! | TAAAAATTGTTATTTGAGTT+AGG | + | Chr2:28635132-28635151 | MsG0280008285.01.T01:intron | 15.0% |
| !!! | TATATCTATTAGTATTTTGA+AGG | + | Chr2:28637548-28637567 | MsG0280008285.01.T01:three_prime_UTR | 15.0% |
| !! | AGTAACCTATGTAATAAAAT+GGG | - | Chr2:28634866-28634885 | None:intergenic | 20.0% |
| !! | ATGAGTGAATATTAAAAGAT+TGG | - | Chr2:28634322-28634341 | None:intergenic | 20.0% |
| !! | GTAAAGAAAAACAATTTCTT+TGG | - | Chr2:28635348-28635367 | None:intergenic | 20.0% |
| !! | TAAATAATCAATCTCAATAG+CGG | - | Chr2:28636487-28636506 | None:intergenic | 20.0% |
| !! | TCACTATCATAAATATAAAG+TGG | - | Chr2:28634557-28634576 | None:intergenic | 20.0% |
| !! | TTCAAAAAGATATATTGTTG+TGG | + | Chr2:28635884-28635903 | MsG0280008285.01.T01:CDS | 20.0% |
| !!! | AATATATCTTTTTGAACAAC+GGG | - | Chr2:28635880-28635899 | None:intergenic | 20.0% |
| !!! | AATATTTTTGTCTTTGATCT+TGG | + | Chr2:28636225-28636244 | MsG0280008285.01.T01:CDS | 20.0% |
| !!! | AATTACCCATTTTATTACAT+AGG | + | Chr2:28634858-28634877 | MsG0280008285.01.T01:intron | 20.0% |
| !!! | CAATATATCTTTTTGAACAA+CGG | - | Chr2:28635881-28635900 | None:intergenic | 20.0% |
| !!! | GACATTTTTTTTTTTGCAAA+TGG | - | Chr2:28634434-28634453 | None:intergenic | 20.0% |
| !!! | TATCTTTAAGAGTAAGATAT+TGG | - | Chr2:28636926-28636945 | None:intergenic | 20.0% |
| !!! | TGATTCTTTATTTTCAAATG+TGG | + | Chr2:28635171-28635190 | MsG0280008285.01.T01:intron | 20.0% |
| !!! | TTAAAGTTGATCATAATAGA+TGG | + | Chr2:28635528-28635547 | MsG0280008285.01.T01:intron | 20.0% |
| !!! | TTTATCTCATTTTCAACAAA+TGG | - | Chr2:28634795-28634814 | None:intergenic | 20.0% |
| ! | ACTTTGTGCAAGAATTTAAT+AGG | + | Chr2:28636364-28636383 | MsG0280008285.01.T01:CDS | 25.0% |
| ! | ATGTATTGCATCAAACAATA+AGG | - | Chr2:28634750-28634769 | None:intergenic | 25.0% |
| ! | ATTTAATAGGAAGAACAAAG+TGG | + | Chr2:28636377-28636396 | MsG0280008285.01.T01:CDS | 25.0% |
| ! | CAAGTTTGAAGAAATCAATA+TGG | + | Chr2:28636545-28636564 | MsG0280008285.01.T01:CDS | 25.0% |
| ! | GAATAGAAATATACCAAAGA+CGG | - | Chr2:28634298-28634317 | None:intergenic | 25.0% |
| ! | GAGTAACCTATGTAATAAAA+TGG | - | Chr2:28634867-28634886 | None:intergenic | 25.0% |
| ! | GTAATAAAATGGGTAATTAG+TGG | - | Chr2:28634856-28634875 | None:intergenic | 25.0% |
| ! | TCTTCATACACTCATTAAAA+AGG | - | Chr2:28636572-28636591 | None:intergenic | 25.0% |
| ! | TGAGATTGATTATTTATACG+AGG | + | Chr2:28636491-28636510 | MsG0280008285.01.T01:CDS | 25.0% |
| ! | TTACTTCATAAGAATAACCA+GGG | + | Chr2:28637380-28637399 | MsG0280008285.01.T01:CDS | 25.0% |
| ! | TTTACTTCATAAGAATAACC+AGG | + | Chr2:28637379-28637398 | MsG0280008285.01.T01:CDS | 25.0% |
| !! | AAAATTGATTCAAGAAGCTA+AGG | + | Chr2:28637190-28637209 | MsG0280008285.01.T01:CDS | 25.0% |
| !! | ATACATATGAAATGAGCTTT+TGG | + | Chr2:28634657-28634676 | MsG0280008285.01.T01:intron | 25.0% |
| !! | ATATATCTTTTTGAACAACG+GGG | - | Chr2:28635879-28635898 | None:intergenic | 25.0% |
| !! | ATGAAATGGTTCAGTTATTT+TGG | - | Chr2:28634457-28634476 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAACTACAATATG+TGG | - | Chr2:28635465-28635484 | None:intergenic | 25.0% |
| !!! | CTTGGTTTTTTTAATCTTTC+CGG | + | Chr2:28637011-28637030 | MsG0280008285.01.T01:CDS | 25.0% |
| !!! | TCTATTAGTATTTTGAAGGT+TGG | + | Chr2:28637552-28637571 | MsG0280008285.01.T01:three_prime_UTR | 25.0% |
| !!! | TGAAATGGTTCAGTTATTTT+GGG | - | Chr2:28634456-28634475 | None:intergenic | 25.0% |
| AAAAACCTAAGCTACAATCA+GGG | - | Chr2:28635039-28635058 | None:intergenic | 30.0% | |
| AAAAGACTGTAACCATGATT+TGG | + | Chr2:28637657-28637676 | MsG0280008285.01.T01:three_prime_UTR | 30.0% | |
| ACGATTAGTGTTAAGTACAA+GGG | + | Chr2:28635943-28635962 | MsG0280008285.01.T01:CDS | 30.0% | |
| ATAAAGTTATGTTGTGACAG+TGG | + | Chr2:28635200-28635219 | MsG0280008285.01.T01:intron | 30.0% | |
| ATAGGTCGTAAGTTAGATTA+TGG | + | Chr2:28635729-28635748 | MsG0280008285.01.T01:intron | 30.0% | |
| ATCTAATGCATTCATTACCT+TGG | - | Chr2:28637252-28637271 | None:intergenic | 30.0% | |
| ATGAAGATGAGAAATTCCTA+AGG | + | Chr2:28637222-28637241 | MsG0280008285.01.T01:CDS | 30.0% | |
| ATGACTGCATTTACAAGTTA+AGG | + | Chr2:28637270-28637289 | MsG0280008285.01.T01:CDS | 30.0% | |
| CATTAAGAATGTTCCAAACT+TGG | + | Chr2:28636794-28636813 | MsG0280008285.01.T01:CDS | 30.0% | |
| GACAAAAGAAGTAATTGTGA+TGG | + | Chr2:28636195-28636214 | MsG0280008285.01.T01:CDS | 30.0% | |
| GCAAATGGTTCAGTTATTAT+GGG | - | Chr2:28634419-28634438 | None:intergenic | 30.0% | |
| GTACATGATATTGTTCTTGT+CGG | + | Chr2:28636636-28636655 | MsG0280008285.01.T01:CDS | 30.0% | |
| TAAAAACCTAAGCTACAATC+AGG | - | Chr2:28635040-28635059 | None:intergenic | 30.0% | |
| TAATGAAGTAGATGTTCTTG+AGG | + | Chr2:28637403-28637422 | MsG0280008285.01.T01:CDS | 30.0% | |
| TACGATTAGTGTTAAGTACA+AGG | + | Chr2:28635942-28635961 | MsG0280008285.01.T01:CDS | 30.0% | |
| TATGACCATGTTAAAGAAAC+AGG | + | Chr2:28635779-28635798 | MsG0280008285.01.T01:intron | 30.0% | |
| TATTGCGTAACTTCTTCAAT+GGG | + | Chr2:28636691-28636710 | MsG0280008285.01.T01:CDS | 30.0% | |
| TGAGAATCGTTAAAATAAGC+AGG | - | Chr2:28636081-28636100 | None:intergenic | 30.0% | |
| TGCAAATGGTTCAGTTATTA+TGG | - | Chr2:28634420-28634439 | None:intergenic | 30.0% | |
| TTGTACTTAACACTAATCGT+AGG | - | Chr2:28635943-28635962 | None:intergenic | 30.0% | |
| ! | AAAAAATAGGGAAAAGCATG+TGG | + | Chr2:28634978-28634997 | MsG0280008285.01.T01:intron | 30.0% |
| ! | ATTCACCTGTTTCTTTAACA+TGG | - | Chr2:28635787-28635806 | None:intergenic | 30.0% |
| ! | ATTTTTGTCTTTGATCTTGG+TGG | + | Chr2:28636228-28636247 | MsG0280008285.01.T01:CDS | 30.0% |
| ! | CACAATTACTTCTTTTGTCA+AGG | - | Chr2:28636194-28636213 | None:intergenic | 30.0% |
| ! | CTCATTTTCAACAAATGGAT+AGG | - | Chr2:28634790-28634809 | None:intergenic | 30.0% |
| ! | TATGTGCACTTGTTAACTAT+TGG | - | Chr2:28634588-28634607 | None:intergenic | 30.0% |
| !! | AAGGAATGCTCTAAAGAATA+AGG | + | Chr2:28637289-28637308 | MsG0280008285.01.T01:CDS | 30.0% |
| !! | CAATTTTTCAATTTCGACTC+TGG | - | Chr2:28637177-28637196 | None:intergenic | 30.0% |
| !! | TATTGGTTTGTCTTCTTGAA+AGG | - | Chr2:28636909-28636928 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTCAGATGCTAAG+AGG | + | Chr2:28635830-28635849 | MsG0280008285.01.T01:intron | 30.0% |
| AAGGACACTCTCTTTCAAAT+TGG | + | Chr2:28636458-28636477 | MsG0280008285.01.T01:CDS | 35.0% | |
| ACCCTCATAAACTTCAATCA+AGG | - | Chr2:28636961-28636980 | None:intergenic | 35.0% | |
| AGAACAAAGTGGATATCACT+AGG | + | Chr2:28636388-28636407 | MsG0280008285.01.T01:CDS | 35.0% | |
| AGACATCACCTTTAATTGTG+AGG | - | Chr2:28636275-28636294 | None:intergenic | 35.0% | |
| AGATGAGAAATTCCTAAGGA+AGG | + | Chr2:28637226-28637245 | MsG0280008285.01.T01:CDS | 35.0% | |
| ATAGCAAAGCATACATCCAA+GGG | - | Chr2:28637062-28637081 | None:intergenic | 35.0% | |
| ATGCTAAGAGGTTAATTGGT+AGG | + | Chr2:28635842-28635861 | MsG0280008285.01.T01:CDS | 35.0% | |
| ATGGTTCAGTTATTATGGGA+CGG | - | Chr2:28634415-28634434 | None:intergenic | 35.0% | |
| ATTCACTCATATTGTAGCCA+GGG | + | Chr2:28634332-28634351 | MsG0280008285.01.T01:intron | 35.0% | |
| CACATGAATATGTTGTTCCA+AGG | - | Chr2:28634125-28634144 | None:intergenic | 35.0% | |
| CGATAACCAATGACAAAGAA+AGG | + | Chr2:28637147-28637166 | MsG0280008285.01.T01:CDS | 35.0% | |
| CTATTGCGTAACTTCTTCAA+TGG | + | Chr2:28636690-28636709 | MsG0280008285.01.T01:CDS | 35.0% | |
| CTGACTGTATAACACATAAG+AGG | + | Chr2:28635391-28635410 | MsG0280008285.01.T01:intron | 35.0% | |
| CTTCTTGTGAAAAAGCGAAA+AGG | + | Chr2:28636439-28636458 | MsG0280008285.01.T01:CDS | 35.0% | |
| GATTGTTGAAAGTTGTCTTG+TGG | + | Chr2:28636590-28636609 | MsG0280008285.01.T01:CDS | 35.0% | |
| GCCTTGATTGAAGTTTATGA+GGG | + | Chr2:28636957-28636976 | MsG0280008285.01.T01:CDS | 35.0% | |
| GGAACAACATATTCATGTGT+TGG | + | Chr2:28634126-28634145 | MsG0280008285.01.T01:CDS | 35.0% | |
| GGAATTTCTCATCTTCATCA+TGG | - | Chr2:28637220-28637239 | None:intergenic | 35.0% | |
| GGATAACCTTTCTTTGTCAT+TGG | - | Chr2:28637156-28637175 | None:intergenic | 35.0% | |
| TATTCACTCATATTGTAGCC+AGG | + | Chr2:28634331-28634350 | MsG0280008285.01.T01:intron | 35.0% | |
| TCAGATGCTAAGAGGTTAAT+TGG | + | Chr2:28635838-28635857 | MsG0280008285.01.T01:intron | 35.0% | |
| TCAGTGAAAGCAACAAAAGA+AGG | - | Chr2:28634216-28634235 | None:intergenic | 35.0% | |
| TGATTATCCTCACAACGTTA+AGG | - | Chr2:28636140-28636159 | None:intergenic | 35.0% | |
| TGCCTTGATTGAAGTTTATG+AGG | + | Chr2:28636956-28636975 | MsG0280008285.01.T01:CDS | 35.0% | |
| TTCTTGAGGATCATCTGAAA+GGG | + | Chr2:28637417-28637436 | MsG0280008285.01.T01:CDS | 35.0% | |
| TTCTTTACTTCGACACTTCT+TGG | + | Chr2:28635360-28635379 | MsG0280008285.01.T01:intron | 35.0% | |
| ! | ACAGTCTTTTAGCACAAGAT+TGG | - | Chr2:28637647-28637666 | None:intergenic | 35.0% |
| ! | CATATTCATGTGTTGGTGTT+TGG | + | Chr2:28634133-28634152 | MsG0280008285.01.T01:CDS | 35.0% |
| ! | CTTCAATCAAGGCACTATAT+TGG | - | Chr2:28636950-28636969 | None:intergenic | 35.0% |
| ! | GTGACAACTGCATTTTTAAC+CGG | - | Chr2:28636054-28636073 | None:intergenic | 35.0% |
| ! | TGCTTTGCTATCGATGAAAA+CGG | + | Chr2:28637071-28637090 | MsG0280008285.01.T01:CDS | 35.0% |
| ! | TTTGAAGTTAAAGCCACTTC+TGG | + | Chr2:28636294-28636313 | MsG0280008285.01.T01:CDS | 35.0% |
| AAACATGAAGGAGATTGCAG+AGG | + | Chr2:28636014-28636033 | MsG0280008285.01.T01:CDS | 40.0% | |
| AACTTACGACCTATGAAGCA+TGG | - | Chr2:28635723-28635742 | None:intergenic | 40.0% | |
| ACACATATAGCATACACGCA+TGG | - | Chr2:28634939-28634958 | None:intergenic | 40.0% | |
| ACACCAGCAATAACCTTGAA+CGG | - | Chr2:28635910-28635929 | None:intergenic | 40.0% | |
| ACTAGCCAGTCTTGATTACA+AGG | - | Chr2:28637463-28637482 | None:intergenic | 40.0% | |
| AGGTTGGACAAAATTTGCAG+TGG | + | Chr2:28637568-28637587 | MsG0280008285.01.T01:three_prime_UTR | 40.0% | |
| ATAACACATAAGAGGCGAGT+TGG | + | Chr2:28635399-28635418 | MsG0280008285.01.T01:intron | 40.0% | |
| ATCCAGACTTTAGGTACATG+TGG | + | Chr2:28634359-28634378 | MsG0280008285.01.T01:intron | 40.0% | |
| CAAGAAACGTTGATCAACGA+GGG | + | Chr2:28635496-28635515 | MsG0280008285.01.T01:intron | 40.0% | |
| CAATCTCCTTCATGTTTGTG+AGG | - | Chr2:28636011-28636030 | None:intergenic | 40.0% | |
| CACGTCCTAGATTCAAACAT+GGG | + | Chr2:28635087-28635106 | MsG0280008285.01.T01:intron | 40.0% | |
| CATCTTAACTGTTTCAGCAG+AGG | + | Chr2:28637094-28637113 | MsG0280008285.01.T01:CDS | 40.0% | |
| CATGATATTGTTCTTGTCGG+TGG | + | Chr2:28636639-28636658 | MsG0280008285.01.T01:CDS | 40.0% | |
| CATTGTCCTCACAAACATGA+AGG | + | Chr2:28636002-28636021 | MsG0280008285.01.T01:CDS | 40.0% | |
| CTGAGATACCAAGTGACAAT+GGG | - | Chr2:28636836-28636855 | None:intergenic | 40.0% | |
| CTTCACCCATGTTTGAATCT+AGG | - | Chr2:28635095-28635114 | None:intergenic | 40.0% | |
| CTTCATGTTTGTGAGGACAA+TGG | - | Chr2:28636004-28636023 | None:intergenic | 40.0% | |
| GAACACCTTGTAATCAAGAC+TGG | + | Chr2:28637455-28637474 | MsG0280008285.01.T01:CDS | 40.0% | |
| GAACATCTACTTCATTACCC+TGG | - | Chr2:28637400-28637419 | None:intergenic | 40.0% | |
| GACAATGGATGAGATTTCCT+CGG | - | Chr2:28635989-28636008 | None:intergenic | 40.0% | |
| GAGATTATCCACAACGATGA+AGG | + | Chr2:28634177-28634196 | MsG0280008285.01.T01:CDS | 40.0% | |
| GATAGCAAAGCATACATCCA+AGG | - | Chr2:28637063-28637082 | None:intergenic | 40.0% | |
| GATCAATCGTGCAATAACTG+TGG | + | Chr2:28637349-28637368 | MsG0280008285.01.T01:CDS | 40.0% | |
| GATCTCATTCTTACTTCCAG+TGG | - | Chr2:28637126-28637145 | None:intergenic | 40.0% | |
| GATGCATGTTGGAGCTATAT+GGG | - | Chr2:28635013-28635032 | None:intergenic | 40.0% | |
| GCTTCATAGGTTACGACATT+GGG | - | Chr2:28635238-28635257 | None:intergenic | 40.0% | |
| GGACAATTCAGACAAATGTC+TGG | + | Chr2:28635420-28635439 | MsG0280008285.01.T01:intron | 40.0% | |
| GTGTCTCTCCTCACAATTAA+AGG | + | Chr2:28636264-28636283 | MsG0280008285.01.T01:CDS | 40.0% | |
| GTTCTTGAGGATCATCTGAA+AGG | + | Chr2:28637416-28637435 | MsG0280008285.01.T01:CDS | 40.0% | |
| TAATGATCGCATCATGAGTG+TGG | + | Chr2:28636860-28636879 | MsG0280008285.01.T01:CDS | 40.0% | |
| TAGTGTTAAGTACAAGGGTG+AGG | + | Chr2:28635948-28635967 | MsG0280008285.01.T01:CDS | 40.0% | |
| TATATTGTTGTGGCCGTTCA+AGG | + | Chr2:28635894-28635913 | MsG0280008285.01.T01:CDS | 40.0% | |
| TATGAAGCATAGACACCTCT+AGG | + | Chr2:28635250-28635269 | MsG0280008285.01.T01:intron | 40.0% | |
| TATTATTGATCCCTCTGTCC+CGG | - | Chr2:28634693-28634712 | None:intergenic | 40.0% | |
| TCAAGAAACGTTGATCAACG+AGG | + | Chr2:28635495-28635514 | MsG0280008285.01.T01:intron | 40.0% | |
| TGAAGTTTATGAGGGTGAGA+GGG | + | Chr2:28636965-28636984 | MsG0280008285.01.T01:CDS | 40.0% | |
| TGAGATACCAAGTGACAATG+GGG | - | Chr2:28636835-28636854 | None:intergenic | 40.0% | |
| TGCTTCATAGGTTACGACAT+TGG | - | Chr2:28635239-28635258 | None:intergenic | 40.0% | |
| TGTGTTATACAGTCAGACAC+CGG | - | Chr2:28635387-28635406 | None:intergenic | 40.0% | |
| TTCAGTTATTATGGGACGGA+AGG | - | Chr2:28634411-28634430 | None:intergenic | 40.0% | |
| TTGAAGTTTATGAGGGTGAG+AGG | + | Chr2:28636964-28636983 | MsG0280008285.01.T01:CDS | 40.0% | |
| TTGCTTTCACTGATGCTCAA+AGG | + | Chr2:28634223-28634242 | MsG0280008285.01.T01:CDS | 40.0% | |
| TTTCACTGATGCTCAAAGGT+TGG | + | Chr2:28634227-28634246 | MsG0280008285.01.T01:CDS | 40.0% | |
| TTTGTCTTTGATCTTGGTGG+TGG | + | Chr2:28636231-28636250 | MsG0280008285.01.T01:CDS | 40.0% | |
| ! | AGAGGCTTATTTGGAATCAC+CGG | + | Chr2:28636032-28636051 | MsG0280008285.01.T01:CDS | 40.0% |
| ! | CAAGATTGGCATGGTAATGT+TGG | - | Chr2:28637633-28637652 | None:intergenic | 40.0% |
| ! | CTTTTAGCACAAGATTGGCA+TGG | - | Chr2:28637642-28637661 | None:intergenic | 40.0% |
| ! | TTCATGTGTTGGTGTTTGGT+TGG | + | Chr2:28634137-28634156 | MsG0280008285.01.T01:CDS | 40.0% |
| ! | TTGTCTTTGATCTTGGTGGT+GGG | + | Chr2:28636232-28636251 | MsG0280008285.01.T01:CDS | 40.0% |
| ! | TTTTGTTGCCTTCATCGTTG+TGG | - | Chr2:28634188-28634207 | None:intergenic | 40.0% |
| !! | AAAGGTACAGAAGTGTTCCT+AGG | - | Chr2:28636891-28636910 | None:intergenic | 40.0% |
| !! | TAGAGGTGTCTATGCTTCAT+AGG | - | Chr2:28635251-28635270 | None:intergenic | 40.0% |
| !!! | AGCTTTTGGCTCAGTTAATC+CGG | + | Chr2:28634671-28634690 | MsG0280008285.01.T01:intron | 40.0% |
| !!! | GACTGGCTAGTTTTCTTCAT+CGG | + | Chr2:28637472-28637491 | MsG0280008285.01.T01:exon | 40.0% |
| AAAACATGAAGGTCGTGCAG+TGG | + | Chr2:28634092-28634111 | MsG0280008285.01.T01:CDS | 45.0% | |
| AAACATGAAGGTCGTGCAGT+GGG | + | Chr2:28634093-28634112 | MsG0280008285.01.T01:CDS | 45.0% | |
| AACGCACAAAACACCGTCTT+TGG | + | Chr2:28634282-28634301 | MsG0280008285.01.T01:CDS | 45.0% | |
| ACCTAAGCTACAATCAGGGA+CGG | - | Chr2:28635035-28635054 | None:intergenic | 45.0% | |
| ACGTGTCATGCGAATGTCAT+AGG | - | Chr2:28635302-28635321 | None:intergenic | 45.0% | |
| ACTCATATTGTAGCCAGGGA+CGG | + | Chr2:28634336-28634355 | MsG0280008285.01.T01:intron | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | + | Chr2:28636168-28636187 | MsG0280008285.01.T01:CDS | 45.0% | |
| ATATGCAATAGCTGCAGCAG+TGG | - | Chr2:28636169-28636188 | None:intergenic | 45.0% | |
| ATGAGATTTCCTCGGCACAA+AGG | - | Chr2:28635981-28636000 | None:intergenic | 45.0% | |
| CAAAGCATACATCCAAGGGA+TGG | - | Chr2:28637058-28637077 | None:intergenic | 45.0% | |
| CATAAGCAACAGCCTCATCA+GGG | - | Chr2:28636740-28636759 | None:intergenic | 45.0% | |
| CTCCACATGTACCTAAAGTC+TGG | - | Chr2:28634364-28634383 | None:intergenic | 45.0% | |
| GAAATTCCTAAGGAAGGCCA+AGG | + | Chr2:28637232-28637251 | MsG0280008285.01.T01:CDS | 45.0% | |
| GCACGTCCTAGATTCAAACA+TGG | + | Chr2:28635086-28635105 | MsG0280008285.01.T01:intron | 45.0% | |
| GCGTAACTTCTTCAATGGGA+AGG | + | Chr2:28636695-28636714 | MsG0280008285.01.T01:CDS | 45.0% | |
| GCTGAGATACCAAGTGACAA+TGG | - | Chr2:28636837-28636856 | None:intergenic | 45.0% | |
| GGAGATTGCAGAGGCTTATT+TGG | + | Chr2:28636023-28636042 | MsG0280008285.01.T01:CDS | 45.0% | |
| GGATGCATGTTGGAGCTATA+TGG | - | Chr2:28635014-28635033 | None:intergenic | 45.0% | |
| TACTTCGACACTTCTTGGAC+CGG | + | Chr2:28635365-28635384 | MsG0280008285.01.T01:intron | 45.0% | |
| TATGCAATAGCTGCAGCAGT+GGG | - | Chr2:28636168-28636187 | None:intergenic | 45.0% | |
| TCATGAGTGTGGTGATTCCT+AGG | + | Chr2:28636871-28636890 | MsG0280008285.01.T01:CDS | 45.0% | |
| TTCGTGTCAAGTGTTTGCGT+TGG | + | Chr2:28635694-28635713 | MsG0280008285.01.T01:intron | 45.0% | |
| ! | ACTGATGCTCAAAGGTTGGT+CGG | + | Chr2:28634231-28634250 | MsG0280008285.01.T01:CDS | 45.0% |
| ! | ACTTCTGGAAACACTCACCT+CGG | + | Chr2:28636309-28636328 | MsG0280008285.01.T01:CDS | 45.0% |
| ! | CGCAATAGTTCCTGCACTTT+TGG | - | Chr2:28636678-28636697 | None:intergenic | 45.0% |
| ! | CTGATGAGGCTGTTGCTTAT+GGG | + | Chr2:28636739-28636758 | MsG0280008285.01.T01:CDS | 45.0% |
| ! | GAAAGGGCTTGAGAGTATGT+TGG | + | Chr2:28637433-28637452 | MsG0280008285.01.T01:CDS | 45.0% |
| ! | GTCTAGGATTCCAAAAGTGC+AGG | + | Chr2:28636665-28636684 | MsG0280008285.01.T01:CDS | 45.0% |
| ! | TCATTACCTTGGCCTTCCTT+AGG | - | Chr2:28637241-28637260 | None:intergenic | 45.0% |
| ! | TGATGAGGCTGTTGCTTATG+GGG | + | Chr2:28636740-28636759 | MsG0280008285.01.T01:CDS | 45.0% |
| !!! | GCTTTTGGCTCAGTTAATCC+GGG | + | Chr2:28634672-28634691 | MsG0280008285.01.T01:intron | 45.0% |
| AATCAGGGACGGATGCATGT+TGG | - | Chr2:28635024-28635043 | None:intergenic | 50.0% | |
| ACGAGGAACACTTGGAAGAC+CGG | - | Chr2:28637033-28637052 | None:intergenic | 50.0% | |
| AGAAGTTCTCAGCCTCCTCA+AGG | - | Chr2:28636424-28636443 | None:intergenic | 50.0% | |
| CAAGCTGCTGTGTTGAGTGA+AGG | + | Chr2:28636771-28636790 | MsG0280008285.01.T01:CDS | 50.0% | |
| CACAACGTTAAGGCCAGCAA+TGG | - | Chr2:28636130-28636149 | None:intergenic | 50.0% | |
| CCATAAGCAACAGCCTCATC+AGG | - | Chr2:28636741-28636760 | None:intergenic | 50.0% | |
| CGTTGGAGTCCATGCTTCAT+AGG | + | Chr2:28635711-28635730 | MsG0280008285.01.T01:intron | 50.0% | |
| CTAGGAATCCAAGAGCCTTG+AGG | + | Chr2:28636406-28636425 | MsG0280008285.01.T01:CDS | 50.0% | |
| CTCAGTTAATCCGGGACAGA+GGG | + | Chr2:28634680-28634699 | MsG0280008285.01.T01:intron | 50.0% | |
| GACGTTACCCCATTGTCACT+TGG | + | Chr2:28636825-28636844 | MsG0280008285.01.T01:CDS | 50.0% | |
| GAGGTGAGTGTTTCCAGAAG+TGG | - | Chr2:28636310-28636329 | None:intergenic | 50.0% | |
| TCAGCAGAGGAAAGATCCAC+TGG | + | Chr2:28637107-28637126 | MsG0280008285.01.T01:CDS | 50.0% | |
| TCCGTCCCTGATTGTAGCTT+AGG | + | Chr2:28635031-28635050 | MsG0280008285.01.T01:intron | 50.0% | |
| TGGCCGTTCAAGGTTATTGC+TGG | + | Chr2:28635904-28635923 | MsG0280008285.01.T01:CDS | 50.0% | |
| TTCTCAGCGAAAAGCCACCA+TGG | + | Chr2:28636095-28636114 | MsG0280008285.01.T01:CDS | 50.0% | |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | + | Chr2:28636738-28636757 | MsG0280008285.01.T01:CDS | 50.0% |
| ! | CTTCTGGAAACACTCACCTC+GGG | + | Chr2:28636310-28636329 | MsG0280008285.01.T01:CDS | 50.0% |
| ! | TTCTGGAAACACTCACCTCG+GGG | + | Chr2:28636311-28636330 | MsG0280008285.01.T01:CDS | 50.0% |
| !! | ACCTCTAGGACTACGTGTGT+CGG | + | Chr2:28635264-28635283 | MsG0280008285.01.T01:intron | 50.0% |
| !! | CAAGAGCATCAACCCTGATG+AGG | + | Chr2:28636725-28636744 | MsG0280008285.01.T01:CDS | 50.0% |
| !! | TTGCTGGCCTTAACGTTGTG+AGG | + | Chr2:28636130-28636149 | MsG0280008285.01.T01:CDS | 50.0% |
| AATGGCACCAGCATCCATGG+TGG | - | Chr2:28636112-28636131 | None:intergenic | 55.0% | |
| ACGTCTCGCAGCACCAAGTT+TGG | - | Chr2:28636810-28636829 | None:intergenic | 55.0% | |
| AGCAATGGCACCAGCATCCA+TGG | - | Chr2:28636115-28636134 | None:intergenic | 55.0% | |
| CAGGGACGGATCCAGACTTT+AGG | + | Chr2:28634350-28634369 | MsG0280008285.01.T01:intron | 55.0% | |
| CGAAAAGCCACCATGGATGC+TGG | + | Chr2:28636102-28636121 | MsG0280008285.01.T01:CDS | 55.0% | |
| CTAAAGTCTGGATCCGTCCC+TGG | - | Chr2:28634352-28634371 | None:intergenic | 55.0% | |
| GCTCAGTTAATCCGGGACAG+AGG | + | Chr2:28634679-28634698 | MsG0280008285.01.T01:intron | 55.0% | |
| GGAATCCAAGAGCCTTGAGG+AGG | + | Chr2:28636409-28636428 | MsG0280008285.01.T01:CDS | 55.0% | |
| GGTCTTCCAAGTGTTCCTCG+TGG | + | Chr2:28637032-28637051 | MsG0280008285.01.T01:CDS | 55.0% | |
| TATCAAAGTCCTCTCCCCCG+AGG | - | Chr2:28636329-28636348 | None:intergenic | 55.0% | |
| TCTGGAAACACTCACCTCGG+GGG | + | Chr2:28636312-28636331 | MsG0280008285.01.T01:CDS | 55.0% | |
| TTCTTGTCGGTGGCTCGTCT+AGG | + | Chr2:28636649-28636668 | MsG0280008285.01.T01:CDS | 55.0% | |
| ! | GATGCTCAAAGGTTGGTCGG+TGG | + | Chr2:28634234-28634253 | MsG0280008285.01.T01:CDS | 55.0% |
| !! | ATGGATGCTGGTGCCATTGC+TGG | + | Chr2:28636114-28636133 | MsG0280008285.01.T01:CDS | 55.0% |
| !! | CCTCTAGGACTACGTGTGTC+GGG | + | Chr2:28635265-28635284 | MsG0280008285.01.T01:intron | 55.0% |
| AAACACTCACCTCGGGGGAG+AGG | + | Chr2:28636317-28636336 | MsG0280008285.01.T01:CDS | 60.0% | |
| ACATCCAAGGGATGGCCACG+AGG | - | Chr2:28637050-28637069 | None:intergenic | 60.0% | |
| CCCGACACACGTAGTCCTAG+AGG | - | Chr2:28635268-28635287 | None:intergenic | 60.0% | |
| CGTGCAGTGGGAATCGACCT+TGG | + | Chr2:28634105-28634124 | MsG0280008285.01.T01:CDS | 60.0% | |
| CTCAGCCTCCTCAAGGCTCT+TGG | - | Chr2:28636417-28636436 | None:intergenic | 60.0% | |
| GCGAGGGACAACAACGTGCT+TGG | + | Chr2:28636993-28637012 | MsG0280008285.01.T01:CDS | 60.0% | |
| GGAGAAGCTCCTTTGTGCCG+AGG | + | Chr2:28635969-28635988 | MsG0280008285.01.T01:CDS | 60.0% | |
| GGATGGCCACGAGGAACACT+TGG | - | Chr2:28637041-28637060 | None:intergenic | 60.0% | |
| GTGCGCGTGTGAGTGTCAGA+TGG | - | Chr2:28635070-28635089 | None:intergenic | 60.0% | |
| TGTTCCTCGTGGCCATCCCT+TGG | + | Chr2:28637043-28637062 | MsG0280008285.01.T01:CDS | 60.0% | |
| !! | GTTGGTCGGTGGTGCTGCTA+AGG | + | Chr2:28634245-28634264 | MsG0280008285.01.T01:CDS | 60.0% |
| AGGGTGAGAGGGCAAGAGCG+AGG | + | Chr2:28636976-28636995 | MsG0280008285.01.T01:CDS | 65.0% | |
| GGGTGAGAGGGCAAGAGCGA+GGG | + | Chr2:28636977-28636996 | MsG0280008285.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 28634084 | 28637679 | 28634084 | ID=MsG0280008285.01;Name=MsG0280008285.01 |
| Chr2 | mRNA | 28634084 | 28637679 | 28634084 | ID=MsG0280008285.01.T01;Parent=MsG0280008285.01;Name=MsG0280008285.01.T01;_AED=0.48;_eAED=0.48;_QI=0|1|1|1|0.5|0.33|3|198|619 |
| Chr2 | exon | 28634084 | 28634303 | 28634084 | ID=MsG0280008285.01.T01:exon:41013;Parent=MsG0280008285.01.T01 |
| Chr2 | exon | 28635842 | 28637679 | 28635842 | ID=MsG0280008285.01.T01:exon:41014;Parent=MsG0280008285.01.T01 |
| Chr2 | CDS | 28634084 | 28634303 | 28634084 | ID=MsG0280008285.01.T01:cds;Parent=MsG0280008285.01.T01 |
| Chr2 | CDS | 28635842 | 28637481 | 28635842 | ID=MsG0280008285.01.T01:cds;Parent=MsG0280008285.01.T01 |
| Chr2 | three_prime_UTR | 28637482 | 28637679 | 28637482 | ID=MsG0280008285.01.T01:three_prime_utr;Parent=MsG0280008285.01.T01 |
| Gene Sequence |
| Protein sequence |
