AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026002.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026002.01.T01 MTR_5g037400 90.618 469 43 1 1 469 1 468 0.0 883
MsG0580026002.01.T01 MTR_5g037400 84.222 469 40 2 1 469 1 435 0.0 805
MsG0580026002.01.T01 MTR_5g037400 90.281 391 38 0 1 391 1 391 0.0 739
MsG0580026002.01.T01 MTR_5g037420 89.189 148 16 0 163 310 1 148 1.27e-94 283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026002.01.T01 AT1G27150 61.538 468 180 0 1 468 1 468 0.0 604
MsG0580026002.01.T01 AT1G27110 57.569 469 198 1 1 468 12 480 0.0 537
MsG0580026002.01.T01 AT1G27110 58.081 396 165 1 1 395 12 407 1.06e-157 454
MsG0580026002.01.T01 AT1G27110 57.650 366 154 1 105 469 2 367 7.04e-149 429
MsG0580026002.01.T01 AT1G27110 58.562 292 120 1 105 395 2 293 4.71e-117 347

Find 96 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCATTGCCATCAAAATT+TGG 0.146676 5:-28959448 None:intergenic
TTCTCTATCCCTTGTTAATC+AGG 0.241617 5:+28957625 MsG0580026002.01.T01:CDS
AAAGCAGAAGATCTTCTTAC+AGG 0.262828 5:+28958694 MsG0580026002.01.T01:CDS
GTTGATTTCAAATCCTCTTT+TGG 0.280915 5:-28957875 None:intergenic
TAGAGAGAGATGTGTGATTA+TGG 0.283212 5:+28955791 MsG0580026002.01.T01:CDS
CATGGTTATGTGAAGGTAAT+TGG 0.330303 5:+28959749 MsG0580026002.01.T01:intron
TTGATGTATTCAACGAAGTT+TGG 0.334666 5:+28959789 MsG0580026002.01.T01:CDS
AAAGCAGTTCCCAAGAGATT+TGG 0.342502 5:+28957550 MsG0580026002.01.T01:CDS
GAAGGAGAAAATTACATATA+TGG 0.350885 5:+28957796 MsG0580026002.01.T01:CDS
GAGACGGCACAGCTTTCTTA+TGG 0.361307 5:+28959958 MsG0580026002.01.T01:CDS
AGCTTTCTTATGGCGTTTGC+TGG 0.374537 5:+28959968 MsG0580026002.01.T01:CDS
AATCCAATGTTTAGGCAAAC+TGG 0.374954 5:+28958608 MsG0580026002.01.T01:intron
AAACAACAAATAATGCAAAA+AGG 0.378736 5:+28958829 MsG0580026002.01.T01:CDS
AGGTATATGACAATTATATA+TGG 0.380439 5:+28958266 MsG0580026002.01.T01:CDS
TGTAGCACTTTGTTACTTAG+AGG 0.383596 5:+28958216 MsG0580026002.01.T01:CDS
GCAGAAGCACTTTATGCATA+TGG 0.394080 5:+28959388 MsG0580026002.01.T01:CDS
TCAATGAAGGTTCTTAGTTA+TGG 0.408223 5:+28955768 MsG0580026002.01.T01:intron
TTTAGAGAAGCCAAATCTCT+TGG 0.410532 5:-28957560 None:intergenic
TGAGTAAGTTGTGGTTGGTT+AGG 0.425062 5:+28960518 MsG0580026002.01.T01:three_prime_UTR
TTGTGAAACCTGTTGGTAAT+AGG 0.428649 5:-28955663 None:intergenic
TTTGCAATTGCAGCAGCGTC+TGG 0.428835 5:-28960273 None:intergenic
TTCTGCTTTAGAAATTTGTC+CGG 0.442708 5:-28958680 None:intergenic
TATCTTATTGTAGGATTTCG+AGG 0.444796 5:+28958794 MsG0580026002.01.T01:intron
AGAAGGAGTGAAGAACAATA+TGG 0.456711 5:+28955565 None:intergenic
TTAGAGAAGCCAAATCTCTT+GGG 0.456999 5:-28957559 None:intergenic
TTCTTACAGGCTTAAAAGAA+AGG 0.462809 5:+28958707 MsG0580026002.01.T01:CDS
ACAAATCCTGTGTTTCTACA+TGG 0.463773 5:+28957589 MsG0580026002.01.T01:CDS
GTTAATAAAATGAGCTGCTA+AGG 0.468183 5:-28955853 None:intergenic
TCACAGAATCAAATCATAAC+CGG 0.470671 5:+28960344 MsG0580026002.01.T01:three_prime_UTR
CATCAACTCCTATTACCAAC+AGG 0.471508 5:+28955655 MsG0580026002.01.T01:CDS
ACAAGGGATAGAGAAAGATC+AGG 0.475534 5:-28957617 None:intergenic
TTCCGTTATTGGAGCTTGGA+CGG 0.479517 5:+28957830 MsG0580026002.01.T01:CDS
ATTCACATTTCACATTGAAC+CGG 0.479947 5:-28960363 None:intergenic
AAACATGGACTGGAGTTACT+TGG 0.480215 5:+28959424 MsG0580026002.01.T01:CDS
TTGTCAGGTTGACACACAAT+TGG 0.480422 5:+28958188 MsG0580026002.01.T01:intron
TGTATTGACAGTGTGGGCTT+TGG 0.484218 5:+28958651 MsG0580026002.01.T01:CDS
TACTATATTGCAACATGCTA+AGG 0.492111 5:-28960413 None:intergenic
GCTGAGGAAGCTGCCAAAAG+AGG 0.492957 5:+28957862 MsG0580026002.01.T01:CDS
AGCTGTTGAGTTTCATTACA+AGG 0.494876 5:+28956924 MsG0580026002.01.T01:CDS
ACTTAACAGCTTCTCTAAAA+CGG 0.499394 5:-28958051 None:intergenic
CATGTTGTGACCATCCATCT+TGG 0.500368 5:-28957900 None:intergenic
CTTGTTGAGTAAGTTGTGGT+TGG 0.518601 5:+28960513 MsG0580026002.01.T01:three_prime_UTR
ATCCGTCCAAGCTCCAATAA+CGG 0.519593 5:-28957832 None:intergenic
TTTGAAATCAACAACCAAGA+TGG 0.521124 5:+28957886 MsG0580026002.01.T01:CDS
GAAAACTAGTTTCTCGTACA+AGG 0.523903 5:-28956857 None:intergenic
ACCTCGAGCACGCTTTGCGT+TGG 0.527580 5:-28958247 None:intergenic
GTTGTGCGTGCGTGATGAGT+TGG 0.533789 5:+28958446 MsG0580026002.01.T01:CDS
GCATAAGCTATCATTACCAT+AGG 0.535527 5:+28960386 MsG0580026002.01.T01:three_prime_UTR
GCACTTTATGCATATGGAAG+AGG 0.535799 5:+28959394 MsG0580026002.01.T01:CDS
GTAAGTTGTGGTTGGTTAGG+AGG 0.536916 5:+28960521 MsG0580026002.01.T01:three_prime_UTR
TCAGGTTGACACACAATTGG+TGG 0.537033 5:+28958191 MsG0580026002.01.T01:intron
GAACAGCGGAGACGCGATGA+AGG 0.539744 5:+28959826 MsG0580026002.01.T01:CDS
AGGTAACGACAAACATGGAC+TGG 0.552737 5:+28959414 MsG0580026002.01.T01:CDS
GTGTGGGCTTTGGCAAAGAC+CGG 0.553062 5:+28958661 MsG0580026002.01.T01:CDS
TGCCATCAGTTATTTGATGT+CGG 0.555331 5:+28956882 MsG0580026002.01.T01:CDS
TGTATCATAACTTACTTGAT+CGG 0.558733 5:-28958511 None:intergenic
GTAGCACTTTGTTACTTAGA+GGG 0.570256 5:+28958217 MsG0580026002.01.T01:CDS
AACTGATGCCGCAGTTCCTG+AGG 0.571703 5:+28958303 MsG0580026002.01.T01:CDS
CAAGGGATAGAGAAAGATCA+GGG 0.572407 5:-28957616 None:intergenic
ATAGGTTTACTTAAATGCTG+TGG 0.573126 5:+28958410 MsG0580026002.01.T01:intron
TATGAAATGAATGTAACTCA+TGG 0.576173 5:+28960440 MsG0580026002.01.T01:three_prime_UTR
TGAAGAACAATATGGAAGGA+AGG 0.577851 5:+28955573 MsG0580026002.01.T01:exon
GGAGTGAAGAACAATATGGA+AGG 0.580233 5:+28955569 None:intergenic
TTCCGACATCAAATAACTGA+TGG 0.581209 5:-28956884 None:intergenic
AGGCAAACTGGTATTTAGAG+TGG 0.584151 5:+28958620 MsG0580026002.01.T01:intron
TGAAAGAATGTTCTTCGTCG+TGG 0.586473 5:+28958077 MsG0580026002.01.T01:CDS
AAATCAACAACCAAGATGGA+TGG 0.588332 5:+28957890 MsG0580026002.01.T01:CDS
AACATGCTAAGGAGTCCCTA+TGG 0.591024 5:-28960402 None:intergenic
ATGCTGTGGCTCTGCTTCTG+CGG 0.594304 5:+28958424 MsG0580026002.01.T01:CDS
CAAATCCTGTGTTTCTACAT+GGG 0.594367 5:+28957590 MsG0580026002.01.T01:CDS
CATGCTTGTTGAGTAAGTTG+TGG 0.598342 5:+28960509 MsG0580026002.01.T01:three_prime_UTR
CATAAGCTATCATTACCATA+GGG 0.598705 5:+28960387 MsG0580026002.01.T01:three_prime_UTR
CCCACACTGTCAATACATCA+AGG 0.606762 5:-28958645 None:intergenic
ATATGACAATTATATATGGA+AGG 0.612918 5:+28958270 MsG0580026002.01.T01:CDS
CTTAGCAGCATTAAGCAAAG+AGG 0.618782 5:-28955898 None:intergenic
GAAAAGGAACCTGATTAACA+AGG 0.618904 5:-28957634 None:intergenic
AAGCGAATCAAGAAGAGAGA+CGG 0.620890 5:+28959942 MsG0580026002.01.T01:CDS
AACAGCGGAGACGCGATGAA+GGG 0.622093 5:+28959827 MsG0580026002.01.T01:CDS
TGGACGGATGAGAGAAGCTG+AGG 0.624501 5:+28957846 MsG0580026002.01.T01:CDS
ACCTTGATGTATTGACAGTG+TGG 0.628634 5:+28958644 MsG0580026002.01.T01:CDS
CATAACTTACTTGATCGGCT+AGG 0.630902 5:-28958506 None:intergenic
GGCAACCCATGTAGAAACAC+AGG 0.631216 5:-28957595 None:intergenic
GGAAGAGGTAACGACAAACA+TGG 0.632216 5:+28959409 MsG0580026002.01.T01:CDS
TCCAACGCAAAGCGTGCTCG+AGG 0.636232 5:+28958246 MsG0580026002.01.T01:CDS
AGGATCAAATTAAACGACTG+TGG 0.636904 5:+28955593 MsG0580026002.01.T01:CDS
AGAGATTCCACTTACAAGGT+GGG 0.637210 5:-28955922 None:intergenic
CACAACTTACTCAACAAGCA+TGG 0.637905 5:-28960508 None:intergenic
GGCACTCATACTGAAGAACA+TGG 0.646723 5:-28958030 None:intergenic
ATCGTGCACCTCAGGAACTG+CGG 0.648673 5:-28958311 None:intergenic
AAAAGGAACCTGATTAACAA+GGG 0.651342 5:-28957633 None:intergenic
CCTTGATGTATTGACAGTGT+GGG 0.661911 5:+28958645 MsG0580026002.01.T01:CDS
TACATCATGTTGCTGAACAG+CGG 0.662080 5:+28959812 MsG0580026002.01.T01:CDS
AAGTCATGACAATGACAATG+AGG 0.663869 5:+28960485 MsG0580026002.01.T01:three_prime_UTR
ATTAAACGACTGTGGATACG+AGG 0.667629 5:+28955601 MsG0580026002.01.T01:CDS
ATGTGTGATTATGGAAGCAG+TGG 0.671233 5:+28955800 MsG0580026002.01.T01:CDS
CAGGTTCTACCGCAAAACGA+AGG 0.698632 5:+28957778 MsG0580026002.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATTTTTCCTATTTAA+AGG + Chr5:28957706-28957725 MsG0580026002.01.T01:intron 10.0%
!!! TATTTACATATTATTTTAAC+AGG + Chr5:28957330-28957349 MsG0580026002.01.T01:intron 10.0%
!! AGGAAATTATTAATAATGAA+AGG - Chr5:28960102-28960121 None:intergenic 15.0%
!! TCAATGTATTTGTAAAAAAT+TGG + Chr5:28957930-28957949 MsG0580026002.01.T01:intron 15.0%
!!! AATAATAAACAGAAAGTATA+TGG + Chr5:28956970-28956989 MsG0580026002.01.T01:intron 15.0%
!!! ATAATTTTCATTCATGAAAA+AGG - Chr5:28960562-28960581 None:intergenic 15.0%
!!! TAATTTTCATTCATGAAAAA+GGG - Chr5:28960561-28960580 None:intergenic 15.0%
!!! TATGTTATTTCATATTTACA+AGG + Chr5:28956472-28956491 MsG0580026002.01.T01:intron 15.0%
!!! TATTTTTTTTTTACCAAACA+GGG + Chr5:28956546-28956565 MsG0580026002.01.T01:intron 15.0%
!!! TTTTAAATTACTATAACTAC+AGG - Chr5:28956084-28956103 None:intergenic 15.0%
!! AAACAACAAATAATGCAAAA+AGG + Chr5:28958829-28958848 MsG0580026002.01.T01:CDS 20.0%
!! AAATGCAATTAAATGAATGA+TGG - Chr5:28956597-28956616 None:intergenic 20.0%
!! AACTTGATGGAAAATAAAAA+AGG - Chr5:28955986-28956005 None:intergenic 20.0%
!! AAGAAAACATTGATATGATA+AGG - Chr5:28955698-28955717 None:intergenic 20.0%
!! ACTTGATGGAAAATAAAAAA+GGG - Chr5:28955985-28956004 None:intergenic 20.0%
!! AGAAAACATTGATATGATAA+GGG - Chr5:28955697-28955716 None:intergenic 20.0%
!! AGGTATATGACAATTATATA+TGG + Chr5:28958266-28958285 MsG0580026002.01.T01:CDS 20.0%
!! AGTAATGTTACTAAAAATGA+GGG + Chr5:28958962-28958981 MsG0580026002.01.T01:intron 20.0%
!! ATAAAACTGTACCTTTAAAT+AGG - Chr5:28957720-28957739 None:intergenic 20.0%
!! ATAACATGTTATCTTATTGT+AGG + Chr5:28958785-28958804 MsG0580026002.01.T01:intron 20.0%
!! ATATGACAATTATATATGGA+AGG + Chr5:28958270-28958289 MsG0580026002.01.T01:CDS 20.0%
!! ATTATTGAATCATTTGATTC+TGG + Chr5:28960004-28960023 MsG0580026002.01.T01:intron 20.0%
!! GTTTGGTAAAAAAAAAATAG+TGG - Chr5:28956545-28956564 None:intergenic 20.0%
!! TAATTTAAACTCTCAATTCT+TGG + Chr5:28958582-28958601 MsG0580026002.01.T01:intron 20.0%
!! TAGTAATGTTACTAAAAATG+AGG + Chr5:28958961-28958980 MsG0580026002.01.T01:intron 20.0%
!! TGGAAAAACATGTTAATTAA+GGG - Chr5:28959217-28959236 None:intergenic 20.0%
!! TTATTGAATCATTTGATTCT+GGG + Chr5:28960005-28960024 MsG0580026002.01.T01:intron 20.0%
!! TTCCAAATAAATAATAAGTG+CGG + Chr5:28956723-28956742 MsG0580026002.01.T01:intron 20.0%
!! TTCTATAACAATATTAGTCA+AGG - Chr5:28959275-28959294 None:intergenic 20.0%
!! TTGGAAAAACATGTTAATTA+AGG - Chr5:28959218-28959237 None:intergenic 20.0%
!! TTGGAAAATAAATTTAGTGT+TGG + Chr5:28957307-28957326 MsG0580026002.01.T01:intron 20.0%
!! TTTAGTAACATTACTAGTTA+AGG - Chr5:28958957-28958976 None:intergenic 20.0%
!!! AAAAAAAAATAGTGGATAGT+TGG - Chr5:28956537-28956556 None:intergenic 20.0%
!!! AAAATGAGTGTTTACTTTTA+TGG + Chr5:28960167-28960186 MsG0580026002.01.T01:intron 20.0%
!!! ATAAAAGTAAACACTCATTT+TGG - Chr5:28960168-28960187 None:intergenic 20.0%
!!! ATAATAACTGCTGAATATTT+TGG + Chr5:28957207-28957226 MsG0580026002.01.T01:intron 20.0%
!!! CTATTTTTTTTTTACCAAAC+AGG + Chr5:28956545-28956564 MsG0580026002.01.T01:intron 20.0%
!!! CTTCATTATTTTTTACTTTC+AGG + Chr5:28960224-28960243 MsG0580026002.01.T01:intron 20.0%
!!! GACTATATTTTGATTTTTCT+TGG + Chr5:28959325-28959344 MsG0580026002.01.T01:intron 20.0%
!!! TTGTTATTATATGTGTTGAA+TGG + Chr5:28957366-28957385 MsG0580026002.01.T01:intron 20.0%
!!! TTTTATTTTCCATCAAGTTA+GGG + Chr5:28955987-28956006 MsG0580026002.01.T01:intron 20.0%
!!! TTTTGGAATTAATAATGTCA+TGG + Chr5:28959731-28959750 MsG0580026002.01.T01:intron 20.0%
!!! TTTTTATTTTCCATCAAGTT+AGG + Chr5:28955986-28956005 MsG0580026002.01.T01:intron 20.0%
! AAAAATAATAAGACCCTGTT+TGG - Chr5:28956562-28956581 None:intergenic 25.0%
! AAAACCATGAATAACAAACT+TGG - Chr5:28957131-28957150 None:intergenic 25.0%
! AAACAAAGGAAATGTTCATT+TGG + Chr5:28958549-28958568 MsG0580026002.01.T01:intron 25.0%
! AAATCAAAATATAGTCCACT+TGG - Chr5:28959321-28959340 None:intergenic 25.0%
! AAATTGTTTGTGATAGCTTA+TGG + Chr5:28959036-28959055 MsG0580026002.01.T01:intron 25.0%
! AACCATAAATAAATCCCAAA+AGG + Chr5:28957274-28957293 MsG0580026002.01.T01:intron 25.0%
! AATTGCAAATGAAAAAGCTA+AGG + Chr5:28960287-28960306 MsG0580026002.01.T01:CDS 25.0%
! AATTGCAATTAAGAAAGAGT+AGG + Chr5:28956692-28956711 MsG0580026002.01.T01:intron 25.0%
! AGAGAAATCTATGAACAAAA+AGG + Chr5:28957014-28957033 MsG0580026002.01.T01:intron 25.0%
! AGTGCATGATATATAAACAA+AGG + Chr5:28958535-28958554 MsG0580026002.01.T01:intron 25.0%
! ATTGCAATTAAGAAAGAGTA+GGG + Chr5:28956693-28956712 MsG0580026002.01.T01:intron 25.0%
! GAAATGTTGTGTAATTGAAA+AGG - Chr5:28957653-28957672 None:intergenic 25.0%
! GAAGGAGAAAATTACATATA+TGG + Chr5:28957796-28957815 MsG0580026002.01.T01:CDS 25.0%
! GGATGTTTAGATTTCAAATT+TGG - Chr5:28959611-28959630 None:intergenic 25.0%
! GTAATGTTACTAAAAATGAG+GGG + Chr5:28958963-28958982 MsG0580026002.01.T01:intron 25.0%
! TATAGAGTTATCAATTTGTC+AGG + Chr5:28958173-28958192 MsG0580026002.01.T01:intron 25.0%
! TATGAAATGAATGTAACTCA+TGG + Chr5:28960440-28960459 MsG0580026002.01.T01:three_prime_UTR 25.0%
! TCCAAATAAATAATAAGTGC+GGG + Chr5:28956724-28956743 MsG0580026002.01.T01:intron 25.0%
! TGTATCATAACTTACTTGAT+CGG - Chr5:28958514-28958533 None:intergenic 25.0%
!! AGTAAACCTATTTTCAAATG+AGG - Chr5:28958401-28958420 None:intergenic 25.0%
!! ATTAACATGTTTTTCCAAAC+AGG + Chr5:28959220-28959239 MsG0580026002.01.T01:intron 25.0%
!! TTAACATGTTTTTCCAAACA+GGG + Chr5:28959221-28959240 MsG0580026002.01.T01:intron 25.0%
!!! CTCATTTTGGTTCTTAAAAA+TGG - Chr5:28960155-28960174 None:intergenic 25.0%
!!! GATAAGTGTTTTGATATTAC+AGG + Chr5:28956825-28956844 MsG0580026002.01.T01:intron 25.0%
!!! TGTAGATTTTTTTGTGCTTT+TGG + Chr5:28956631-28956650 MsG0580026002.01.T01:intron 25.0%
!!! TTTGATTTTGCTGTATGATA+CGG + Chr5:28960069-28960088 MsG0580026002.01.T01:intron 25.0%
AAAAGGAACCTGATTAACAA+GGG - Chr5:28957636-28957655 None:intergenic 30.0%
AAAGAGTTTGAGTAGAAACA+TGG - Chr5:28957496-28957515 None:intergenic 30.0%
AAAGGAAATGTTCATTTGGA+AGG + Chr5:28958553-28958572 MsG0580026002.01.T01:intron 30.0%
AATAATGCAAAAAGGAATGC+TGG + Chr5:28958837-28958856 MsG0580026002.01.T01:CDS 30.0%
AATTGAAGATGACTGATGAT+GGG - Chr5:28959886-28959905 None:intergenic 30.0%
ATAATGTCATGGTTATGTGA+AGG + Chr5:28959742-28959761 MsG0580026002.01.T01:intron 30.0%
ATAGGTTTACTTAAATGCTG+TGG + Chr5:28958410-28958429 MsG0580026002.01.T01:intron 30.0%
ATCTAATAAGCTATAAGCCA+CGG - Chr5:28956315-28956334 None:intergenic 30.0%
ATTCACATTTCACATTGAAC+CGG - Chr5:28960366-28960385 None:intergenic 30.0%
CAATCATTGCCATCAAAATT+TGG - Chr5:28959451-28959470 None:intergenic 30.0%
CATAAGCTATCATTACCATA+GGG + Chr5:28960387-28960406 MsG0580026002.01.T01:three_prime_UTR 30.0%
CCAAATAAATAATAAGTGCG+GGG + Chr5:28956725-28956744 MsG0580026002.01.T01:intron 30.0%
CTTGGATTAATCCAATGTTT+AGG + Chr5:28958600-28958619 MsG0580026002.01.T01:intron 30.0%
GCAGTTTATTCATTTGAAGA+TGG + Chr5:28958124-28958143 MsG0580026002.01.T01:intron 30.0%
GCTAGGTTAAAATGAAGAAA+TGG - Chr5:28959366-28959385 None:intergenic 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - Chr5:28956506-28956525 None:intergenic 30.0%
GTATCATACAGCAAAATCAA+AGG - Chr5:28960070-28960089 None:intergenic 30.0%
GTTAATAAAATGAGCTGCTA+AGG - Chr5:28955856-28955875 None:intergenic 30.0%
TAAGGAAATAAGCTGAAAAC+AGG - Chr5:28959092-28959111 None:intergenic 30.0%
TAATTGAAGATGACTGATGA+TGG - Chr5:28959887-28959906 None:intergenic 30.0%
TACTATATTGCAACATGCTA+AGG - Chr5:28960416-28960435 None:intergenic 30.0%
TATCTTATTGTAGGATTTCG+AGG + Chr5:28958794-28958813 MsG0580026002.01.T01:intron 30.0%
TCAATGAAGGTTCTTAGTTA+TGG + Chr5:28955768-28955787 MsG0580026002.01.T01:intron 30.0%
TCACAGAATCAAATCATAAC+CGG + Chr5:28960344-28960363 MsG0580026002.01.T01:three_prime_UTR 30.0%
TTCTGACCTCATTTGAAAAT+AGG + Chr5:28958392-28958411 MsG0580026002.01.T01:intron 30.0%
TTCTTACAGGCTTAAAAGAA+AGG + Chr5:28958707-28958726 MsG0580026002.01.T01:CDS 30.0%
TTGATGTATTCAACGAAGTT+TGG + Chr5:28959789-28959808 MsG0580026002.01.T01:CDS 30.0%
TTTCATTCATGAAAAAGGGA+GGG - Chr5:28960557-28960576 None:intergenic 30.0%
! ACTTAACAGCTTCTCTAAAA+CGG - Chr5:28958054-28958073 None:intergenic 30.0%
! CTTTTCGATGTTTTCAATGA+AGG + Chr5:28955755-28955774 MsG0580026002.01.T01:intron 30.0%
! TAATTTTCTCCTTCGTTTTG+CGG - Chr5:28957790-28957809 None:intergenic 30.0%
! TAGCTATTCTAGAGAACTTA+AGG - Chr5:28959110-28959129 None:intergenic 30.0%
! TTACTTGGTCCAAATTTTGA+TGG + Chr5:28959439-28959458 MsG0580026002.01.T01:CDS 30.0%
! TTTGAAATCAACAACCAAGA+TGG + Chr5:28957886-28957905 MsG0580026002.01.T01:CDS 30.0%
! TTTTCATCTAATCACTGAAG+TGG - Chr5:28958876-28958895 None:intergenic 30.0%
! TTTTCATTCATGAAAAAGGG+AGG - Chr5:28960558-28960577 None:intergenic 30.0%
!! AAAGTGTTTTAGATGAAGTG+CGG + Chr5:28958750-28958769 MsG0580026002.01.T01:intron 30.0%
!! ATTCGCAAAATTGGTGATTT+TGG - Chr5:28956669-28956688 None:intergenic 30.0%
!! GTTGATTTCAAATCCTCTTT+TGG - Chr5:28957878-28957897 None:intergenic 30.0%
!! TAATAATTTCCTTGCTGTTG+AGG + Chr5:28960110-28960129 MsG0580026002.01.T01:intron 30.0%
!! TGGTGATTTTGGTAAACTAA+GGG - Chr5:28956658-28956677 None:intergenic 30.0%
!! TTCTGCTTTAGAAATTTGTC+CGG - Chr5:28958683-28958702 None:intergenic 30.0%
!! TTGGTGATTTTGGTAAACTA+AGG - Chr5:28956659-28956678 None:intergenic 30.0%
!!! ATTTTTTACTTTCAGGAGAG+AGG + Chr5:28960231-28960250 MsG0580026002.01.T01:intron 30.0%
!!! GCAATTTTGATTCGCAAAAT+TGG - Chr5:28956678-28956697 None:intergenic 30.0%
!!! TCTTGACTTCTTTCGTTTTT+TGG + Chr5:28959714-28959733 MsG0580026002.01.T01:intron 30.0%
!!! TGCCTTTTGGGATTTATTTA+TGG - Chr5:28957279-28957298 None:intergenic 30.0%
AAAAAGAGACCCTAACTTGA+TGG - Chr5:28955999-28956018 None:intergenic 35.0%
AAAGCAGAAGATCTTCTTAC+AGG + Chr5:28958694-28958713 MsG0580026002.01.T01:CDS 35.0%
AAATCAACAACCAAGATGGA+TGG + Chr5:28957890-28957909 MsG0580026002.01.T01:CDS 35.0%
AAATCGCTCACTAATCGATT+AGG - Chr5:28958916-28958935 None:intergenic 35.0%
AACCCAAAACTACATGCTTT+AGG + Chr5:28957102-28957121 MsG0580026002.01.T01:intron 35.0%
AAGAAGTCAAGACACAATAC+TGG - Chr5:28959706-28959725 None:intergenic 35.0%
AAGTCATGACAATGACAATG+AGG + Chr5:28960485-28960504 MsG0580026002.01.T01:three_prime_UTR 35.0%
AATCCAATGTTTAGGCAAAC+TGG + Chr5:28958608-28958627 MsG0580026002.01.T01:intron 35.0%
AATGAGAGATTCCACTTACA+AGG - Chr5:28955929-28955948 None:intergenic 35.0%
AGCTGTTGAGTTTCATTACA+AGG + Chr5:28956924-28956943 MsG0580026002.01.T01:CDS 35.0%
AGGATCAAATTAAACGACTG+TGG + Chr5:28955593-28955612 MsG0580026002.01.T01:CDS 35.0%
ATACCAGTTTGCCTAAACAT+TGG - Chr5:28958614-28958633 None:intergenic 35.0%
CAATTAAGAAAGAGTAGGGA+CGG + Chr5:28956697-28956716 MsG0580026002.01.T01:intron 35.0%
CATGGTTATGTGAAGGTAAT+TGG + Chr5:28959749-28959768 MsG0580026002.01.T01:intron 35.0%
CCCCGCACTTATTATTTATT+TGG - Chr5:28956728-28956747 None:intergenic 35.0%
CTAATCGATTAGGCATACTA+CGG - Chr5:28958906-28958925 None:intergenic 35.0%
CTGTGAAACTTAGAAGGATA+AGG - Chr5:28957761-28957780 None:intergenic 35.0%
CTTATCCTTCTAAGTTTCAC+AGG + Chr5:28957759-28957778 MsG0580026002.01.T01:intron 35.0%
GAAAAGGAACCTGATTAACA+AGG - Chr5:28957637-28957656 None:intergenic 35.0%
GAGAGAGAAAAAAAACAGTG+CGG - Chr5:28957443-28957462 None:intergenic 35.0%
GAGGTCAGAATTCATAACAA+AGG - Chr5:28958382-28958401 None:intergenic 35.0%
GATCTCAAGATTCATGTGTA+TGG - Chr5:28957081-28957100 None:intergenic 35.0%
GCATAAGCTATCATTACCAT+AGG + Chr5:28960386-28960405 MsG0580026002.01.T01:three_prime_UTR 35.0%
TAGAACCTGTGAAACTTAGA+AGG - Chr5:28957767-28957786 None:intergenic 35.0%
TAGAGAGAGATGTGTGATTA+TGG + Chr5:28955791-28955810 MsG0580026002.01.T01:CDS 35.0%
TCTAATAAGCTATAAGCCAC+GGG - Chr5:28956314-28956333 None:intergenic 35.0%
TGAAGAACAATATGGAAGGA+AGG + Chr5:28955573-28955592 MsG0580026002.01.T01:exon 35.0%
TGCCATCAGTTATTTGATGT+CGG + Chr5:28956882-28956901 MsG0580026002.01.T01:CDS 35.0%
TGGTTCTTAAAAATGGCAGA+CGG - Chr5:28960148-28960167 None:intergenic 35.0%
TTACAGGCTTAAAAGAAAGG+TGG + Chr5:28958710-28958729 MsG0580026002.01.T01:intron 35.0%
TTAGAGAAGCCAAATCTCTT+GGG - Chr5:28957562-28957581 None:intergenic 35.0%
TTCATTCATGAAAAAGGGAG+GGG - Chr5:28960556-28960575 None:intergenic 35.0%
TTCCGACATCAAATAACTGA+TGG - Chr5:28956887-28956906 None:intergenic 35.0%
TTCTCAATCACTTCAATTGC+TGG - Chr5:28959924-28959943 None:intergenic 35.0%
TTCTCTATCCCTTGTTAATC+AGG + Chr5:28957625-28957644 MsG0580026002.01.T01:CDS 35.0%
TTGGTTGAATTCGTAGTGTT+TGG - Chr5:28956518-28956537 None:intergenic 35.0%
TTTAGAGAAGCCAAATCTCT+TGG - Chr5:28957563-28957582 None:intergenic 35.0%
! ACAAATCCTGTGTTTCTACA+TGG + Chr5:28957589-28957608 MsG0580026002.01.T01:CDS 35.0%
! AGCTTTGCTCTGGTTTAAAA+TGG - Chr5:28956178-28956197 None:intergenic 35.0%
! ATGCCTAAAGCATGTAGTTT+TGG - Chr5:28957108-28957127 None:intergenic 35.0%
! CAAATCCTGTGTTTCTACAT+GGG + Chr5:28957590-28957609 MsG0580026002.01.T01:CDS 35.0%
! CCAATAACATGTTGCCTTTT+GGG - Chr5:28957291-28957310 None:intergenic 35.0%
! GAAAACTAGTTTCTCGTACA+AGG - Chr5:28956860-28956879 None:intergenic 35.0%
! GTAGCACTTTGTTACTTAGA+GGG + Chr5:28958217-28958236 MsG0580026002.01.T01:CDS 35.0%
! TCCAATAACATGTTGCCTTT+TGG - Chr5:28957292-28957311 None:intergenic 35.0%
! TGCCTAAAGCATGTAGTTTT+GGG - Chr5:28957107-28957126 None:intergenic 35.0%
! TGTAGCACTTTGTTACTTAG+AGG + Chr5:28958216-28958235 MsG0580026002.01.T01:CDS 35.0%
!! GCATCCAAGTTTGTTATTCA+TGG + Chr5:28957124-28957143 MsG0580026002.01.T01:intron 35.0%
!! TTGTGAAACCTGTTGGTAAT+AGG - Chr5:28955666-28955685 None:intergenic 35.0%
!! TTTTGATGGCAATGATTGCA+AGG + Chr5:28959453-28959472 MsG0580026002.01.T01:CDS 35.0%
AAAACTCAGTATCCGTCACA+TGG + Chr5:28956106-28956125 MsG0580026002.01.T01:intron 40.0%
AAAGCAGTTCCCAAGAGATT+TGG + Chr5:28957550-28957569 MsG0580026002.01.T01:CDS 40.0%
AAGCGAATCAAGAAGAGAGA+CGG + Chr5:28959942-28959961 MsG0580026002.01.T01:CDS 40.0%
ACAAGGGATAGAGAAAGATC+AGG - Chr5:28957620-28957639 None:intergenic 40.0%
ACTAATTGCTTCTCACACTC+AGG - Chr5:28959247-28959266 None:intergenic 40.0%
AGAGATTCCACTTACAAGGT+GGG - Chr5:28955925-28955944 None:intergenic 40.0%
AGGCAAACTGGTATTTAGAG+TGG + Chr5:28958620-28958639 MsG0580026002.01.T01:intron 40.0%
ATGTGTGATTATGGAAGCAG+TGG + Chr5:28955800-28955819 MsG0580026002.01.T01:CDS 40.0%
ATTAAACGACTGTGGATACG+AGG + Chr5:28955601-28955620 MsG0580026002.01.T01:CDS 40.0%
ATTAGCAACGCTTATCCAAG+TGG + Chr5:28959303-28959322 MsG0580026002.01.T01:intron 40.0%
CAAGGGATAGAGAAAGATCA+GGG - Chr5:28957619-28957638 None:intergenic 40.0%
CACAACTTACTCAACAAGCA+TGG - Chr5:28960511-28960530 None:intergenic 40.0%
CATAACTTACTTGATCGGCT+AGG - Chr5:28958509-28958528 None:intergenic 40.0%
CATCAACTCCTATTACCAAC+AGG + Chr5:28955655-28955674 MsG0580026002.01.T01:CDS 40.0%
CCCAAAAGGCAACATGTTAT+TGG + Chr5:28957288-28957307 MsG0580026002.01.T01:intron 40.0%
CTAAAAATGAGGGGTCTGTT+TGG + Chr5:28958972-28958991 MsG0580026002.01.T01:intron 40.0%
CTCTCAGATTTGATTCCTCT+GGG - Chr5:28956230-28956249 None:intergenic 40.0%
CTTAGCAGCATTAAGCAAAG+AGG - Chr5:28955901-28955920 None:intergenic 40.0%
CTTGTTGAGTAAGTTGTGGT+TGG + Chr5:28960513-28960532 MsG0580026002.01.T01:three_prime_UTR 40.0%
GACAATCGTTGGATCTAGAT+AGG - Chr5:28959632-28959651 None:intergenic 40.0%
GCACTTTATGCATATGGAAG+AGG + Chr5:28959394-28959413 MsG0580026002.01.T01:CDS 40.0%
GCAGTGCTAAAAACAATTCC+TGG + Chr5:28957162-28957181 MsG0580026002.01.T01:intron 40.0%
GTGAGTACAATGACAATCGT+TGG - Chr5:28959643-28959662 None:intergenic 40.0%
TACATCATGTTGCTGAACAG+CGG + Chr5:28959812-28959831 MsG0580026002.01.T01:CDS 40.0%
TCAAGACACAATACTGGACT+TGG - Chr5:28959700-28959719 None:intergenic 40.0%
TCAATAAAATCGTGCACCTC+AGG - Chr5:28958322-28958341 None:intergenic 40.0%
TCATGTGTTGTGAAACCTGT+TGG - Chr5:28955673-28955692 None:intergenic 40.0%
TCTAAGTTTGTGTGCATTCC+AGG - Chr5:28957183-28957202 None:intergenic 40.0%
TCTCTCAGATTTGATTCCTC+TGG - Chr5:28956231-28956250 None:intergenic 40.0%
TGAAAGAATGTTCTTCGTCG+TGG + Chr5:28958077-28958096 MsG0580026002.01.T01:CDS 40.0%
TGGAATGCACACAAACTTAG+AGG + Chr5:28957182-28957201 MsG0580026002.01.T01:intron 40.0%
TGTACTCACTATGTGAAACG+TGG + Chr5:28959654-28959673 MsG0580026002.01.T01:intron 40.0%
! ACCTTGATGTATTGACAGTG+TGG + Chr5:28958644-28958663 MsG0580026002.01.T01:CDS 40.0%
! ATAAAGTGCTTCTGCAAGCT+AGG - Chr5:28959383-28959402 None:intergenic 40.0%
! ATGGATTAACCCACCGAAAT+TGG + Chr5:28956202-28956221 MsG0580026002.01.T01:intron 40.0%
! ATTGAAAGAAGCACACTCCA+AGG + Chr5:28956252-28956271 MsG0580026002.01.T01:intron 40.0%
! CATGCTTGTTGAGTAAGTTG+TGG + Chr5:28960509-28960528 MsG0580026002.01.T01:three_prime_UTR 40.0%
! CCTTGATGTATTGACAGTGT+GGG + Chr5:28958645-28958664 MsG0580026002.01.T01:CDS 40.0%
! TGAGTAAGTTGTGGTTGGTT+AGG + Chr5:28960518-28960537 MsG0580026002.01.T01:three_prime_UTR 40.0%
!! AAACATGGACTGGAGTTACT+TGG + Chr5:28959424-28959443 MsG0580026002.01.T01:CDS 40.0%
!! CATGCTTGCTTTTCCGTTAT+TGG + Chr5:28957819-28957838 MsG0580026002.01.T01:CDS 40.0%
!! GCAGAAGCACTTTATGCATA+TGG + Chr5:28959388-28959407 MsG0580026002.01.T01:CDS 40.0%
!! TTGTCAGGTTGACACACAAT+TGG + Chr5:28958188-28958207 MsG0580026002.01.T01:intron 40.0%
!! TTTCGGTGGGTTAATCCATA+CGG - Chr5:28956201-28956220 None:intergenic 40.0%
!!! CGTGATGAGTTGGAGTTTTT+TGG + Chr5:28958456-28958475 MsG0580026002.01.T01:CDS 40.0%
AACATGCTAAGGAGTCCCTA+TGG - Chr5:28960405-28960424 None:intergenic 45.0%
AAGTGCGGGGACTAAAATTG+AGG + Chr5:28956738-28956757 MsG0580026002.01.T01:intron 45.0%
ACGACTACCAATGTGCTAAC+TGG - Chr5:28959528-28959547 None:intergenic 45.0%
AGCTTTCTTATGGCGTTTGC+TGG + Chr5:28959968-28959987 MsG0580026002.01.T01:CDS 45.0%
AGGTAACGACAAACATGGAC+TGG + Chr5:28959414-28959433 MsG0580026002.01.T01:CDS 45.0%
ATAAGCCACGGGAACCATTT+GGG - Chr5:28956303-28956322 None:intergenic 45.0%
ATCCGTCCAAGCTCCAATAA+CGG - Chr5:28957835-28957854 None:intergenic 45.0%
ATTCATGAAAAAGGGAGGGG+AGG - Chr5:28960553-28960572 None:intergenic 45.0%
ATTCCTCTGGGTGCCAATTT+CGG - Chr5:28956218-28956237 None:intergenic 45.0%
CAATACTGGACTTGGATTGC+TGG - Chr5:28959692-28959711 None:intergenic 45.0%
CATGTTGTGACCATCCATCT+TGG - Chr5:28957903-28957922 None:intergenic 45.0%
CCCACACTGTCAATACATCA+AGG - Chr5:28958648-28958667 None:intergenic 45.0%
CGACTACCAATGTGCTAACT+GGG - Chr5:28959527-28959546 None:intergenic 45.0%
GAGAGATTCCACTTACAAGG+TGG - Chr5:28955926-28955945 None:intergenic 45.0%
GATTCACCCAGTTAGCACAT+TGG + Chr5:28959518-28959537 MsG0580026002.01.T01:intron 45.0%
GGAAGAGGTAACGACAAACA+TGG + Chr5:28959409-28959428 MsG0580026002.01.T01:CDS 45.0%
GGCACTCATACTGAAGAACA+TGG - Chr5:28958033-28958052 None:intergenic 45.0%
TATAAGCCACGGGAACCATT+TGG - Chr5:28956304-28956323 None:intergenic 45.0%
TTCCGTTATTGGAGCTTGGA+CGG + Chr5:28957830-28957849 MsG0580026002.01.T01:CDS 45.0%
! GCTTTTCCGTTATTGGAGCT+TGG + Chr5:28957826-28957845 MsG0580026002.01.T01:CDS 45.0%
! GTAAGTTGTGGTTGGTTAGG+AGG + Chr5:28960521-28960540 MsG0580026002.01.T01:three_prime_UTR 45.0%
! GTTAGCACATTGGTAGTCGT+TGG + Chr5:28959528-28959547 MsG0580026002.01.T01:intron 45.0%
! TGTATTGACAGTGTGGGCTT+TGG + Chr5:28958651-28958670 MsG0580026002.01.T01:CDS 45.0%
!! ATTGAACCCCTCGGATTAGT+CGG - Chr5:28956133-28956152 None:intergenic 45.0%
!! TCAGGTTGACACACAATTGG+TGG + Chr5:28958191-28958210 MsG0580026002.01.T01:intron 45.0%
AACCAGAGCAAAGCTCCGTA+TGG + Chr5:28956183-28956202 MsG0580026002.01.T01:intron 50.0%
ACATGGACCGACTAATCCGA+GGG + Chr5:28956123-28956142 MsG0580026002.01.T01:intron 50.0%
ATCCATACGGAGCTTTGCTC+TGG - Chr5:28956188-28956207 None:intergenic 50.0%
ATGAAAAAGGGAGGGGAGGT+AGG - Chr5:28960549-28960568 None:intergenic 50.0%
CAGGTTCTACCGCAAAACGA+AGG + Chr5:28957778-28957797 MsG0580026002.01.T01:intron 50.0%
CGCAATGATCCTCAACAGCA+AGG - Chr5:28960122-28960141 None:intergenic 50.0%
GAGACGGCACAGCTTTCTTA+TGG + Chr5:28959958-28959977 MsG0580026002.01.T01:CDS 50.0%
GCTAAGTCCCACCTTGTAAG+TGG + Chr5:28955915-28955934 MsG0580026002.01.T01:intron 50.0%
GGATGGTCACAACATGCTGT+AGG + Chr5:28957907-28957926 MsG0580026002.01.T01:intron 50.0%
GGCAACCCATGTAGAAACAC+AGG - Chr5:28957598-28957617 None:intergenic 50.0%
GTCGTTGGATCGAGATCAGA+TGG + Chr5:28959543-28959562 MsG0580026002.01.T01:intron 50.0%
GTTGGATCGAGATCAGATGG+TGG + Chr5:28959546-28959565 MsG0580026002.01.T01:intron 50.0%
TTAAAATGGCCTCCCGCAAG+TGG - Chr5:28956164-28956183 None:intergenic 50.0%
TTTGCAATTGCAGCAGCGTC+TGG - Chr5:28960276-28960295 None:intergenic 50.0%
! TTAGCCTGGGGATGTTGGTT+TGG - Chr5:28956280-28956299 None:intergenic 50.0%
!! GAACCATTTGGGTTAGCCTG+GGG - Chr5:28956292-28956311 None:intergenic 50.0%
!! GGAACCATTTGGGTTAGCCT+GGG - Chr5:28956293-28956312 None:intergenic 50.0%
!! GGATTAGTCGGTCCATGTGA+CGG - Chr5:28956121-28956140 None:intergenic 50.0%
!! TAGCCTGGGGATGTTGGTTT+GGG - Chr5:28956279-28956298 None:intergenic 50.0%
AACAGCGGAGACGCGATGAA+GGG + Chr5:28959827-28959846 MsG0580026002.01.T01:CDS 55.0%
AACTGATGCCGCAGTTCCTG+AGG + Chr5:28958303-28958322 MsG0580026002.01.T01:CDS 55.0%
ATCCGAGGGGTTCAATCCCA+CGG + Chr5:28956137-28956156 MsG0580026002.01.T01:intron 55.0%
ATCGTGCACCTCAGGAACTG+CGG - Chr5:28958314-28958333 None:intergenic 55.0%
CACATGGACCGACTAATCCG+AGG + Chr5:28956122-28956141 MsG0580026002.01.T01:intron 55.0%
CATCCCCAGGCTAACCCAAA+TGG + Chr5:28956286-28956305 MsG0580026002.01.T01:intron 55.0%
CATGGACCGACTAATCCGAG+GGG + Chr5:28956124-28956143 MsG0580026002.01.T01:intron 55.0%
CTCTGGGTGCCAATTTCGGT+GGG - Chr5:28956214-28956233 None:intergenic 55.0%
GCTAACCCAAATGGTTCCCG+TGG + Chr5:28956295-28956314 MsG0580026002.01.T01:intron 55.0%
GCTGAGGAAGCTGCCAAAAG+AGG + Chr5:28957862-28957881 MsG0580026002.01.T01:CDS 55.0%
GTTGTGCGTGCGTGATGAGT+TGG + Chr5:28958446-28958465 MsG0580026002.01.T01:CDS 55.0%
TCAATCCCACGGTCCACTTG+CGG + Chr5:28956148-28956167 MsG0580026002.01.T01:intron 55.0%
TCTCACACTCAGGCCCTGTT+TGG - Chr5:28959237-28959256 None:intergenic 55.0%
TGGACGGATGAGAGAAGCTG+AGG + Chr5:28957846-28957865 MsG0580026002.01.T01:CDS 55.0%
! ATGCTGTGGCTCTGCTTCTG+CGG + Chr5:28958424-28958443 MsG0580026002.01.T01:CDS 55.0%
! GTGTGGGCTTTGGCAAAGAC+CGG + Chr5:28958661-28958680 MsG0580026002.01.T01:CDS 55.0%
!! GGGAACCATTTGGGTTAGCC+TGG - Chr5:28956294-28956313 None:intergenic 55.0%
!! GGGATGTTGGTTTGGGACCT+TGG - Chr5:28956272-28956291 None:intergenic 55.0%
!! TTGGGTTAGCCTGGGGATGT+TGG - Chr5:28956285-28956304 None:intergenic 55.0%
ACCTCGAGCACGCTTTGCGT+TGG - Chr5:28958250-28958269 None:intergenic 60.0%
CAATCCCACGGTCCACTTGC+GGG + Chr5:28956149-28956168 MsG0580026002.01.T01:intron 60.0%
CCACCGAAATTGGCACCCAG+AGG + Chr5:28956212-28956231 MsG0580026002.01.T01:intron 60.0%
CCTCTGGGTGCCAATTTCGG+TGG - Chr5:28956215-28956234 None:intergenic 60.0%
GAACAGCGGAGACGCGATGA+AGG + Chr5:28959826-28959845 MsG0580026002.01.T01:CDS 60.0%
GACCGTGGGATTGAACCCCT+CGG - Chr5:28956142-28956161 None:intergenic 60.0%
GGTCCCAAACCAACATCCCC+AGG + Chr5:28956273-28956292 MsG0580026002.01.T01:intron 60.0%
TCCAACGCAAAGCGTGCTCG+AGG + Chr5:28958246-28958265 MsG0580026002.01.T01:CDS 60.0%
GCCTCCCGCAAGTGGACCGT+GGG - Chr5:28956156-28956175 None:intergenic 70.0%
TCCCACGGTCCACTTGCGGG+AGG + Chr5:28956152-28956171 MsG0580026002.01.T01:intron 70.0%
GGCCTCCCGCAAGTGGACCG+TGG - Chr5:28956157-28956176 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 28955571 28960594 28955571 ID=MsG0580026002.01;Name=MsG0580026002.01
Chr5 mRNA 28955571 28960594 28955571 ID=MsG0580026002.01.T01;Parent=MsG0580026002.01;Name=MsG0580026002.01.T01;_AED=0.50;_eAED=0.50;_QI=13|1|1|1|1|1|14|259|469
Chr5 exon 28955571 28955676 28955571 ID=MsG0580026002.01.T01:exon:7064;Parent=MsG0580026002.01.T01
Chr5 exon 28955777 28955929 28955777 ID=MsG0580026002.01.T01:exon:7065;Parent=MsG0580026002.01.T01
Chr5 exon 28956847 28956945 28956847 ID=MsG0580026002.01.T01:exon:7066;Parent=MsG0580026002.01.T01
Chr5 exon 28957545 28957646 28957545 ID=MsG0580026002.01.T01:exon:7067;Parent=MsG0580026002.01.T01
Chr5 exon 28957781 28957924 28957781 ID=MsG0580026002.01.T01:exon:7068;Parent=MsG0580026002.01.T01
Chr5 exon 28958025 28958119 28958025 ID=MsG0580026002.01.T01:exon:7069;Parent=MsG0580026002.01.T01
Chr5 exon 28958195 28958324 28958195 ID=MsG0580026002.01.T01:exon:7070;Parent=MsG0580026002.01.T01
Chr5 exon 28958414 28958518 28958414 ID=MsG0580026002.01.T01:exon:7071;Parent=MsG0580026002.01.T01
Chr5 exon 28958622 28958728 28958622 ID=MsG0580026002.01.T01:exon:7072;Parent=MsG0580026002.01.T01
Chr5 exon 28958807 28958858 28958807 ID=MsG0580026002.01.T01:exon:7073;Parent=MsG0580026002.01.T01
Chr5 exon 28959385 28959474 28959385 ID=MsG0580026002.01.T01:exon:7074;Parent=MsG0580026002.01.T01
Chr5 exon 28959764 28959848 28959764 ID=MsG0580026002.01.T01:exon:7075;Parent=MsG0580026002.01.T01
Chr5 exon 28959925 28959989 28959925 ID=MsG0580026002.01.T01:exon:7076;Parent=MsG0580026002.01.T01
Chr5 exon 28960246 28960594 28960246 ID=MsG0580026002.01.T01:exon:7077;Parent=MsG0580026002.01.T01
Chr5 five_prime_UTR 28955571 28955583 28955571 ID=MsG0580026002.01.T01:five_prime_utr;Parent=MsG0580026002.01.T01
Chr5 CDS 28955584 28955676 28955584 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28955777 28955929 28955777 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28956847 28956945 28956847 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28957545 28957646 28957545 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28957781 28957924 28957781 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28958025 28958119 28958025 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28958195 28958324 28958195 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28958414 28958518 28958414 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28958622 28958728 28958622 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28958807 28958858 28958807 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28959385 28959474 28959385 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28959764 28959848 28959764 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28959925 28959989 28959925 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 CDS 28960246 28960335 28960246 ID=MsG0580026002.01.T01:cds;Parent=MsG0580026002.01.T01
Chr5 three_prime_UTR 28960336 28960594 28960336 ID=MsG0580026002.01.T01:three_prime_utr;Parent=MsG0580026002.01.T01
Gene Sequence

>MsG0580026002.01.T01

ATGGAAGGAAGGATCAAATTAAACGACTGTGGATACGAGGTTACAACTTCATCTCAACTCTGCATTTCAGTCATCAACTCCTATTACCAACAGGTTCTTAGTTATGGTAGAGAGAGATGTGTGATTATGGAAGCAGTGGTTCATGATAAGTACTGTGTGTTAGCTAACACCTTAGCAGCTCATTTTATTAACTCTTCTGATTCTTCAAGAGCTGCCTCTTTGCTTAATGCTGCTAAGTCCCACCTTGAACATGCAACCTTGTACGAGAAACTAGTTTTCGATGCCATCAGTTATTTGATGTCGGAAGACAGAGATGATGATGTAGCTGTTGAGTTTCATTACAAGCTTCTAAAGCAGTTCCCAAGAGATTTGGCTTCTCTAAAGAGAGCACAAATCCTGTGTTTCTACATGGGTTGCCCTGATCTTTCTCTATCCCTTGTTAATCAGGTTCTACCGCAAAACGAAGGAGAAAATTACATATATGGCATGCTTGCTTTTCCGTTATTGGAGCTTGGACGGATGAGAGAAGCTGAGGAAGCTGCCAAAAGAGGATTTGAAATCAACAACCAAGATGGATGGTCACAACATGCTTTATGCCATGTTCTTCAGTATGAGTGCCGTTTTAGAGAAGCTGTTAAGTTCATGAAAGAATGTTCTTCGTCGTGGAGTTCTTCTTCATCTTTTATGTTGACACACAATTGGTGGCATGTAGCACTTTGTTACTTAGAGGGAAGTGCTCCAACGCAAAGCGTGCTCGAGGTATATGACAATTATATATGGAAGGAGCTAGACAAAACTGATGCCGCAGTTCCTGAGGTTTACTTAAATGCTGTGGCTCTGCTTCTGCGGTTGTGCGTGCGTGATGAGTTGGAGTTTTTTGGTGATCGTCTCAAGATGCTCGCAGATCGCCTAGCCGATCAAGCAAACTGGTATTTAGAGTGGCACCTTGATGTATTGACAGTGTGGGCTTTGGCAAAGACCGGACAAATTTCTAAAGCAGAAGATCTTCTTACAGGCTTAAAAGAAAGGATTTCGAGGATGACTAAAAAGAAACAACAAATAATGCAAAAAGGAATGCTGCTTGCAGAAGCACTTTATGCATATGGAAGAGGTAACGACAAACATGGACTGGAGTTACTTGGTCCAAATTTTGATGGCAATGATTGCAAGGTAATTGGTGCATCTGATGAACAAGTTGATGTATTCAACGAAGTTTGGTACATCATGTTGCTGAACAGCGGAGACGCGATGAAGGCAATTGAAGTGATTGAGAAGCGAATCAAGAAGAGAGACGGCACAGCTTTCTTATGGCGTTTGCTGGAGAGAGGATACAAACTAGCAAATAGACCAGACGCTGCTGCAATTGCAAATGAAAAAGCTAAGGTTTTCGAGAGTGCTTATTTCAATTAA

Protein sequence

>MsG0580026002.01.T01

MEGRIKLNDCGYEVTTSSQLCISVINSYYQQVLSYGRERCVIMEAVVHDKYCVLANTLAAHFINSSDSSRAASLLNAAKSHLEHATLYEKLVFDAISYLMSEDRDDDVAVEFHYKLLKQFPRDLASLKRAQILCFYMGCPDLSLSLVNQVLPQNEGENYIYGMLAFPLLELGRMREAEEAAKRGFEINNQDGWSQHALCHVLQYECRFREAVKFMKECSSSWSSSSSFMLTHNWWHVALCYLEGSAPTQSVLEVYDNYIWKELDKTDAAVPEVYLNAVALLLRLCVRDELEFFGDRLKMLADRLADQANWYLEWHLDVLTVWALAKTGQISKAEDLLTGLKERISRMTKKKQQIMQKGMLLAEALYAYGRGNDKHGLELLGPNFDGNDCKVIGASDEQVDVFNEVWYIMLLNSGDAMKAIEVIEKRIKKRDGTAFLWRLLERGYKLANRPDAAAIANEKAKVFESAYFN*