AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011648.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011648.01.T01 MTR_3g007770 98.113 689 13 0 1 689 362 1050 0.0 1415
MsG0380011648.01.T01 MTR_8g092590 66.185 692 221 5 1 688 413 1095 0.0 971
MsG0380011648.01.T01 MTR_1g098550 67.341 692 214 6 1 689 411 1093 0.0 961
MsG0380011648.01.T01 MTR_1g098550 67.341 692 214 6 1 689 415 1097 0.0 959
MsG0380011648.01.T01 MTR_2g035780 64.397 705 228 3 1 688 346 1044 0.0 953
MsG0380011648.01.T01 MTR_4g130510 65.602 689 211 6 1 688 375 1038 0.0 948
MsG0380011648.01.T01 MTR_8g037260 65.143 700 216 6 1 688 395 1078 0.0 947
MsG0380011648.01.T01 MTR_3g030040 64.965 705 209 7 1 688 395 1078 0.0 945
MsG0380011648.01.T01 MTR_4g130510 62.517 723 211 7 1 688 375 1072 0.0 931
MsG0380011648.01.T01 MTR_3g107520 63.425 689 245 5 1 688 405 1087 0.0 905
MsG0380011648.01.T01 MTR_2g016630 62.861 692 236 7 1 688 305 979 0.0 905
MsG0380011648.01.T01 MTR_8g086600 62.771 693 232 8 1 688 320 991 0.0 897
MsG0380011648.01.T01 MTR_1g069605 60.465 688 242 7 1 688 235 892 0.0 867
MsG0380011648.01.T01 MTR_7g106680 60.232 689 264 4 1 688 353 1032 0.0 861
MsG0380011648.01.T01 MTR_8g063270 54.348 690 276 7 1 688 329 981 0.0 781
MsG0380011648.01.T01 MTR_8g063270 54.348 690 276 7 1 688 124 776 0.0 780
MsG0380011648.01.T01 MTR_4g130510 66.599 494 143 5 1 493 375 847 0.0 680
MsG0380011648.01.T01 MTR_4g077910 44.415 743 309 12 1 671 418 1128 0.0 622
MsG0380011648.01.T01 MTR_5g029190 44.205 742 312 13 1 671 397 1107 0.0 619
MsG0380011648.01.T01 MTR_7g109200 45.027 744 307 16 1 671 442 1156 0.0 603
MsG0380011648.01.T01 MTR_2g438220 42.608 744 317 15 1 671 304 1010 0.0 581
MsG0380011648.01.T01 MTR_1g039445 42.704 747 315 15 1 677 390 1093 0.0 579
MsG0380011648.01.T01 MTR_1g039480 43.347 729 340 15 1 671 404 1117 0.0 575
MsG0380011648.01.T01 MTR_4g130510 65.333 375 109 4 1 375 375 728 1.38e-167 498
MsG0380011648.01.T01 MTR_7g116230 39.887 707 254 19 1 671 274 845 8.22e-146 446
MsG0380011648.01.T01 MTR_2g087900 32.489 671 375 16 2 662 143 745 2.22e-102 330
MsG0380011648.01.T01 MTR_2g087900 34.623 491 257 9 2 490 143 571 5.92e-86 282
MsG0380011648.01.T01 MTR_2g087960 29.882 676 395 14 1 669 143 746 6.55e-86 286
MsG0380011648.01.T01 MTR_2g087980 29.525 674 390 15 1 667 136 731 3.27e-85 284
MsG0380011648.01.T01 MTR_4g050000 30.382 655 365 16 2 643 139 715 9.29e-85 283
MsG0380011648.01.T01 MTR_2g087950 31.484 667 365 21 2 658 139 723 4.10e-84 282
MsG0380011648.01.T01 MTR_2g087960 33.671 493 260 10 1 492 143 569 4.82e-73 247
MsG0380011648.01.T01 MTR_3g091270 36.627 415 169 12 2 396 156 496 4.65e-70 237
MsG0380011648.01.T01 MTR_3g005560 26.707 659 370 17 2 647 135 693 1.19e-65 230
MsG0380011648.01.T01 MTR_0049s0090 48.936 235 93 4 407 641 134 341 3.89e-64 217
MsG0380011648.01.T01 MTR_3g005560 28.655 513 259 13 2 504 135 550 1.87e-56 202
MsG0380011648.01.T01 MTR_3g060240 42.105 247 134 4 2 245 143 383 6.02e-54 198
MsG0380011648.01.T01 MTR_3g060240 33.200 250 154 5 340 580 397 642 6.83e-32 132
MsG0380011648.01.T01 MTR_3g060280 40.161 249 136 6 2 245 153 393 1.38e-53 191
MsG0380011648.01.T01 MTR_3g060220 40.458 262 146 5 2 260 144 398 8.93e-53 194
MsG0380011648.01.T01 MTR_3g060220 31.475 305 197 6 362 659 423 722 1.40e-32 134
MsG0380011648.01.T01 MTR_3g060220 40.458 262 146 5 2 260 143 397 9.18e-53 194
MsG0380011648.01.T01 MTR_3g060220 31.475 305 197 6 362 659 422 721 1.43e-32 134
MsG0380011648.01.T01 MTR_3g060280 40.161 249 136 6 2 245 153 393 1.36e-52 191
MsG0380011648.01.T01 MTR_3g060280 33.083 133 88 1 360 492 426 557 6.56e-18 88.2
MsG0380011648.01.T01 MTR_3g060280 40.161 249 136 6 2 245 153 393 1.68e-52 191
MsG0380011648.01.T01 MTR_3g060280 32.836 134 89 1 360 493 426 558 4.54e-18 88.6
MsG0380011648.01.T01 MTR_3g060280 40.161 249 136 6 2 245 153 393 4.76e-52 192
MsG0380011648.01.T01 MTR_3g060280 28.803 309 206 9 360 659 426 729 3.36e-31 130
MsG0380011648.01.T01 MTR_2g087900 32.134 389 197 10 2 385 143 469 5.69e-52 187
MsG0380011648.01.T01 MTR_4g088225 36.694 248 143 4 2 248 148 382 1.97e-45 173
MsG0380011648.01.T01 MTR_4g088225 28.453 362 248 7 305 662 376 730 1.83e-41 161
MsG0380011648.01.T01 MTR_4g088225 36.694 248 143 4 2 248 148 382 2.10e-45 173
MsG0380011648.01.T01 MTR_4g088225 28.488 344 237 6 305 646 376 712 5.14e-41 160
MsG0380011648.01.T01 MTR_1g073740 37.959 245 137 4 2 245 149 379 7.61e-44 169
MsG0380011648.01.T01 MTR_1g073740 23.184 358 264 5 322 675 389 739 5.05e-30 127
MsG0380011648.01.T01 MTR_0011s0020 34.263 251 141 3 2 252 135 361 9.28e-41 159
MsG0380011648.01.T01 MTR_0011s0020 23.782 349 244 7 308 647 356 691 3.80e-29 124
MsG0380011648.01.T01 MTR_2g087900 39.048 210 119 4 2 211 143 343 2.48e-40 152
MsG0380011648.01.T01 MTR_3g450800 33.865 251 141 4 2 252 87 312 2.86e-40 157
MsG0380011648.01.T01 MTR_3g450800 25.146 342 234 7 308 640 307 635 1.10e-31 131
MsG0380011648.01.T01 MTR_2g037830 32.677 254 141 5 2 252 135 361 6.47e-38 149
MsG0380011648.01.T01 MTR_2g037830 35.294 119 68 2 327 443 372 483 3.41e-14 76.3
MsG0380011648.01.T01 MTR_3g005560 31.529 314 185 5 2 311 135 422 1.01e-37 146
MsG0380011648.01.T01 MTR_2g037830 32.677 254 141 5 2 252 135 361 1.81e-37 149
MsG0380011648.01.T01 MTR_2g037830 28.659 328 205 8 327 640 372 684 1.98e-31 130
MsG0380011648.01.T01 MTR_8g043560 45.652 184 43 4 491 672 288 416 5.08e-36 141
MsG0380011648.01.T01 MTR_7g084950 66.176 68 23 0 606 673 6 73 3.04e-26 103
MsG0380011648.01.T01 MTR_2g087900 34.167 120 73 4 2 120 143 257 8.82e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011648.01.T01 AT2G21770 66.763 689 220 5 1 688 406 1086 0.0 990
MsG0380011648.01.T01 AT5G09870 66.377 690 221 4 1 688 388 1068 0.0 979
MsG0380011648.01.T01 AT5G64740 65.368 693 226 6 1 688 400 1083 0.0 969
MsG0380011648.01.T01 AT5G44030 63.268 716 230 4 1 688 60 770 0.0 960
MsG0380011648.01.T01 AT4G39350 67.344 689 217 4 1 688 401 1082 0.0 959
MsG0380011648.01.T01 AT5G44030 63.268 716 230 4 1 688 368 1078 0.0 958
MsG0380011648.01.T01 AT5G44030 63.268 716 230 4 1 688 339 1049 0.0 958
MsG0380011648.01.T01 AT5G17420 64.441 689 220 7 1 688 362 1026 0.0 941
MsG0380011648.01.T01 AT5G05170 63.845 697 229 5 1 688 383 1065 0.0 940
MsG0380011648.01.T01 AT4G32410 65.230 673 228 4 1 673 399 1065 0.0 920
MsG0380011648.01.T01 AT2G25540 63.717 678 230 6 1 673 379 1045 0.0 905
MsG0380011648.01.T01 AT4G18780 63.127 678 234 4 1 676 308 971 0.0 899
MsG0380011648.01.T01 AT3G03050 44.130 741 312 12 1 671 423 1131 0.0 618
MsG0380011648.01.T01 AT1G02730 44.772 746 313 12 1 671 447 1168 0.0 612
MsG0380011648.01.T01 AT5G16910 44.130 741 309 13 1 671 426 1131 0.0 612
MsG0380011648.01.T01 AT2G33100 43.583 748 310 18 1 671 312 1024 0.0 589
MsG0380011648.01.T01 AT2G33100 43.583 748 310 18 1 671 312 1024 0.0 589
MsG0380011648.01.T01 AT4G38190 41.565 741 314 11 1 671 401 1092 0.0 575
MsG0380011648.01.T01 AT1G32180 41.633 735 344 15 1 669 251 966 0.0 569
MsG0380011648.01.T01 AT1G32180 41.633 735 344 15 1 669 251 966 0.0 569
MsG0380011648.01.T01 AT2G32610 28.696 690 395 18 2 667 141 757 3.66e-78 265
MsG0380011648.01.T01 AT2G32530 28.152 682 401 15 2 667 141 749 3.32e-77 263
MsG0380011648.01.T01 AT2G32620 28.779 688 395 19 2 667 45 659 1.26e-74 253
MsG0380011648.01.T01 AT2G32620 28.779 688 395 19 2 667 141 755 9.53e-74 253
MsG0380011648.01.T01 AT2G32540 28.194 681 406 14 2 667 141 753 1.78e-73 253
MsG0380011648.01.T01 AT4G15290 28.799 691 387 20 2 667 141 751 3.92e-73 251
MsG0380011648.01.T01 AT4G15320 29.412 663 370 18 2 640 141 729 6.41e-72 248
MsG0380011648.01.T01 AT4G15320 29.412 663 370 18 2 640 141 729 8.55e-72 248
MsG0380011648.01.T01 AT4G15320 28.889 675 373 18 2 640 141 744 6.30e-69 240
MsG0380011648.01.T01 AT2G32620 30.492 528 293 12 2 525 141 598 2.34e-65 227
MsG0380011648.01.T01 AT2G32620 31.136 440 236 9 2 439 141 515 4.71e-56 200
MsG0380011648.01.T01 AT1G55850 41.296 247 130 6 2 245 157 391 7.90e-51 189
MsG0380011648.01.T01 AT1G55850 29.283 321 211 10 347 659 407 719 4.31e-33 136
MsG0380011648.01.T01 AT4G24010 41.107 253 128 6 2 245 147 387 5.15e-50 187
MsG0380011648.01.T01 AT4G24010 32.653 294 191 4 354 645 416 704 5.55e-41 160
MsG0380011648.01.T01 AT4G23990 39.921 253 131 6 2 245 166 406 5.78e-48 181
MsG0380011648.01.T01 AT4G23990 31.959 291 189 5 354 641 435 719 3.33e-40 158
MsG0380011648.01.T01 AT4G24000 38.400 250 132 6 2 245 144 377 1.29e-44 171
MsG0380011648.01.T01 AT4G24000 31.959 291 187 6 354 640 406 689 3.34e-40 157
MsG0380011648.01.T01 AT4G15320 28.287 502 316 17 2 491 141 610 3.10e-42 164
MsG0380011648.01.T01 AT4G24000 31.849 292 188 6 354 641 214 498 7.70e-41 157
MsG0380011648.01.T01 AT4G24000 39.791 191 101 5 61 245 3 185 1.12e-33 136
MsG0380011648.01.T01 AT4G23990 31.959 291 189 5 354 641 221 505 1.05e-40 157
MsG0380011648.01.T01 AT4G23990 40.722 194 102 5 61 245 3 192 3.56e-35 140
MsG0380011648.01.T01 AT4G15320 26.248 541 320 17 2 491 141 653 3.98e-37 149

Find 201 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTAAATGGAAACCAATTT+TGG 0.068442 3:-2994735 None:intergenic
TCTTTCCAGTCATACCTTTA+AGG 0.108112 3:+2986238 None:intergenic
CAAAAGTTAGTTAAGAAATT+TGG 0.131660 3:-2987565 MsG0380011648.01.T01:CDS
GAATCATGGGGACCATTATT+TGG 0.138300 3:-2986306 MsG0380011648.01.T01:CDS
CCTGCTGTTTGCTTGCTTAC+TGG 0.141380 3:-2986830 MsG0380011648.01.T01:CDS
GGTGGAGAAATGAGCAATTT+TGG 0.148467 3:-2986572 MsG0380011648.01.T01:CDS
CACTTGTTTCCATTCCTTAA+AGG 0.151138 3:-2986252 MsG0380011648.01.T01:CDS
TTTAGAAGACAAGCACTTTA+TGG 0.169015 3:-2988295 MsG0380011648.01.T01:CDS
GAAGTCTAAGTTTGAGTTAA+TGG 0.170533 3:-2988161 MsG0380011648.01.T01:CDS
TGCATTGTCCACCCTTCTTC+TGG 0.182855 3:+2989934 None:intergenic
AATCCACATTCTTCTAAAAT+TGG 0.188203 3:+2986111 None:intergenic
ATAATTGTTGAATTTATTAA+AGG 0.189389 3:+2992390 None:intergenic
TGAGTAAACATTGTCCTATT+TGG 0.189993 3:-2986955 MsG0380011648.01.T01:CDS
ATAATAAGACTGATTGTTCT+TGG 0.226478 3:-2991800 MsG0380011648.01.T01:five_prime_UTR
ACCCTTGAGACGCTTAAATT+TGG 0.229880 3:+2993895 None:intergenic
CTGGATTCATAATTCTATAT+TGG 0.264353 3:+2991768 None:intergenic
AATTTATATGCTGTATTTGT+AGG 0.266151 3:-2986528 MsG0380011648.01.T01:CDS
AACATTAGTTTCCCAAATAA+TGG 0.266474 3:+2986294 None:intergenic
CTTCTGAATTTGCAAGGAAA+TGG 0.271384 3:-2990516 MsG0380011648.01.T01:CDS
ATGTTGAACTTCTTACAAAA+AGG 0.277019 3:+2990490 None:intergenic
AACAAATGTATTTGTTTGAT+TGG 0.277319 3:+2988480 None:intergenic
AACATAATTGCTATGGTTGC+TGG 0.278334 3:-2986357 MsG0380011648.01.T01:CDS
GCCTGCAACTAACCCAAAAT+TGG 0.295265 3:+2994722 None:intergenic
CTCCTACCATTGTTCTTGTT+TGG 0.297615 3:-2986206 MsG0380011648.01.T01:CDS
TTCTCAGCAAAATACCATTC+TGG 0.309820 3:+2990454 None:intergenic
CCTATTTGGTATGGATATAA+AGG 0.313850 3:-2986941 MsG0380011648.01.T01:CDS
TGAGTAGATGCAATGAAAAT+AGG 0.323731 3:+2987535 None:intergenic
GTTACAGAAGATATATTAAC+AGG 0.326569 3:-2987118 MsG0380011648.01.T01:CDS
ATCATTCTTCTCTGTCTTGT+GGG 0.328835 3:-2986169 MsG0380011648.01.T01:CDS
CAATTCTCACAAAGATTTGA+TGG 0.340770 3:-2988526 MsG0380011648.01.T01:CDS
CCTTTATATCCATACCAAAT+AGG 0.341183 3:+2986941 None:intergenic
AATCATGGGGACCATTATTT+GGG 0.343210 3:-2986305 MsG0380011648.01.T01:CDS
AGATTTGGTTCACTCTTTCA+TGG 0.346082 3:-2991703 MsG0380011648.01.T01:five_prime_UTR
GAACATAATGAGATAATGTT+TGG 0.350217 3:-2986429 MsG0380011648.01.T01:CDS
GTTCAGGTTGGATGGATCTA+TGG 0.351101 3:-2987145 MsG0380011648.01.T01:intron
TGGATCCATTAGTAGGAAAA+AGG 0.352057 3:-2988561 MsG0380011648.01.T01:CDS
GTATGACTGGAAAGAATAAT+AGG 0.355748 3:-2986230 MsG0380011648.01.T01:CDS
GAAGGGTGTGCTAGAGTTGA+AGG 0.355942 3:-2992853 MsG0380011648.01.T01:intron
TCCAAGGACCTAGCTGCTTA+TGG 0.357901 3:-2992324 MsG0380011648.01.T01:five_prime_UTR
TACGGATTGATTTGACTTGA+TGG 0.359844 3:+2991836 None:intergenic
TTTCATTGCATCTACTCAAT+TGG 0.375642 3:-2987530 MsG0380011648.01.T01:CDS
TTGATTTGACTTGATGGAAT+TGG 0.387990 3:+2991842 None:intergenic
AGATCTATATATTGTATTCC+TGG 0.388066 3:-2987070 MsG0380011648.01.T01:CDS
TCATGTTATGTTTCTGATGA+TGG 0.395730 3:-2990574 MsG0380011648.01.T01:five_prime_UTR
TCACTAACCTGTATCATTCC+TGG 0.396757 3:+2989871 None:intergenic
CATTCTGAATCATCTGTTGC+TGG 0.397496 3:-2988118 MsG0380011648.01.T01:CDS
TCATCAAATAACCTTTCTAA+TGG 0.398141 3:-2987025 MsG0380011648.01.T01:CDS
AATAAATTATTTAAAAGATA+AGG 0.400064 3:-2990431 MsG0380011648.01.T01:CDS
GAGGATTAAAGTGGTTAGAA+AGG 0.401066 3:-2986919 MsG0380011648.01.T01:CDS
ATCTTGACAGGCTTTCCTTA+AGG 0.402558 3:-2991634 MsG0380011648.01.T01:five_prime_UTR
GGACCTACATATGTTGGAAC+AGG 0.405737 3:-2988325 MsG0380011648.01.T01:CDS
TGTCAGTAATATGTGAGATT+TGG 0.408332 3:-2991718 MsG0380011648.01.T01:five_prime_UTR
TTCTGAATTTGCAAGGAAAT+GGG 0.410190 3:-2990515 MsG0380011648.01.T01:CDS
ATAGATAAACATGAAAGGTT+TGG 0.411252 3:-2988359 MsG0380011648.01.T01:intron
TAGACAATGCATATGCTTTG+TGG 0.414831 3:-2991745 MsG0380011648.01.T01:five_prime_UTR
TAAGGAAAGCCTGTCAAGAT+AGG 0.418212 3:+2991637 None:intergenic
GTCTACAACAAGTATTTCAA+TGG 0.418983 3:-2987003 MsG0380011648.01.T01:CDS
TGGTCACGAATATTATTTCC+AGG 0.420021 3:+2989895 None:intergenic
CATCATTCTTCTCTGTCTTG+TGG 0.421895 3:-2986170 MsG0380011648.01.T01:CDS
TTTAATATAAGCAATGTTGT+TGG 0.428653 3:+2986378 None:intergenic
TTTGTAGATTACTTGCCTTA+AGG 0.429394 3:+2991619 None:intergenic
GTAGTCACAAATATATCAAT+TGG 0.429504 3:+2990682 None:intergenic
GGTCTATTCAAAGTGCTAAC+AGG 0.431658 3:-2986507 MsG0380011648.01.T01:CDS
TCTAGTTGCAAAGGCTAAGA+AGG 0.432238 3:-2989959 MsG0380011648.01.T01:CDS
AGCAGCAATGTTAACATTTG+AGG 0.433931 3:-2990551 MsG0380011648.01.T01:exon
TGCAGATGGTGACCCCTTTG+TGG 0.440066 3:-2994005 MsG0380011648.01.T01:five_prime_UTR
AAAGCATATGCATTGTCTAC+TGG 0.440702 3:+2991749 None:intergenic
GAAAGAGAGAAGAGCAATGA+AGG 0.444294 3:-2990392 MsG0380011648.01.T01:intron
AAAACAAGACATGTAATTGT+TGG 0.444723 3:-2988243 MsG0380011648.01.T01:CDS
TCATAGCAATTTCTACAAAC+AGG 0.448786 3:+2993962 None:intergenic
GCATCTACTCAATTGGTTGA+TGG 0.452525 3:-2987523 MsG0380011648.01.T01:CDS
AAACATTGTCCTATTTGGTA+TGG 0.454940 3:-2986950 MsG0380011648.01.T01:CDS
ACAGATTTGCAAGAGTTAGA+TGG 0.459419 3:-2994067 MsG0380011648.01.T01:five_prime_UTR
TCCATGGACATCAATACCTT+TGG 0.460925 3:-2986870 MsG0380011648.01.T01:CDS
AATAGATTACCCTGCTGAAA+AGG 0.465410 3:-2990599 MsG0380011648.01.T01:five_prime_UTR
GCTAAGAAGGTTCCAGAAGA+AGG 0.467713 3:-2989946 MsG0380011648.01.T01:CDS
GGAAGGATAGGATGGAGATA+TGG 0.469308 3:-2992284 MsG0380011648.01.T01:five_prime_UTR
CCATTCCTTAAAGGTATGAC+TGG 0.469504 3:-2986243 MsG0380011648.01.T01:CDS
ATGCTAGAGATGAGATGGAG+TGG 0.471140 3:-2986612 MsG0380011648.01.T01:CDS
AAAATTGGACCAGTTGACTT+AGG 0.471224 3:+2986126 None:intergenic
TATATTAAACATAATTGCTA+TGG 0.474908 3:-2986364 MsG0380011648.01.T01:CDS
TTGTTGTGGATTGTGTTGCA+TGG 0.475364 3:-2988209 MsG0380011648.01.T01:CDS
AAAGGTTTGGATGGTATTCA+AGG 0.475376 3:-2988346 MsG0380011648.01.T01:CDS
CCAGTCATACCTTTAAGGAA+TGG 0.476107 3:+2986243 None:intergenic
GCCATAAGCAGCTAGGTCCT+TGG 0.476883 3:+2992323 None:intergenic
CTTGTTGTAGACCATTAGAA+AGG 0.478021 3:+2987014 None:intergenic
CATTCATTGCAAGCCACAAA+GGG 0.478479 3:+2993992 None:intergenic
GAAAACAGAATGGGGAAAAG+AGG 0.486596 3:-2987425 MsG0380011648.01.T01:intron
TGGAAATGAATTGCCACGTT+TGG 0.487415 3:-2989544 MsG0380011648.01.T01:CDS
GACCTAGCTGCTTATGGCTA+TGG 0.487461 3:-2992318 MsG0380011648.01.T01:five_prime_UTR
CAAGTATTTCAATGGGCCCT+TGG 0.489557 3:-2986995 MsG0380011648.01.T01:CDS
TAGTCTAAGTTCAACACAAA+AGG 0.493696 3:+2988637 None:intergenic
TAATTCAAATAGGTATGAAA+AGG 0.494036 3:-2990728 MsG0380011648.01.T01:intron
TGGCTCAAGTGTTGTTGTTG+TGG 0.495172 3:-2988223 MsG0380011648.01.T01:CDS
CTGAAACTTCTGAATTTGCA+AGG 0.495780 3:-2990522 MsG0380011648.01.T01:CDS
AGTTGAAGGAGATGAAGAGG+AGG 0.496474 3:-2992839 MsG0380011648.01.T01:five_prime_UTR
AACTATGTGGAGAAGACATA+GGG 0.497177 3:-2994033 MsG0380011648.01.T01:five_prime_UTR
AAGAATTACCTCAGGAGACA+TGG 0.497529 3:+2992747 None:intergenic
TGTTGTGGATTGTGTTGCAT+GGG 0.498572 3:-2988208 MsG0380011648.01.T01:CDS
TCTGTTGCTGGGAGTACTAA+AGG 0.499779 3:-2988106 MsG0380011648.01.T01:intron
AGAAGCAATGTGTTTCATGA+TGG 0.500379 3:-2988581 MsG0380011648.01.T01:CDS
TGTTGCTTGGAAGGATAGGA+TGG 0.500594 3:-2992292 MsG0380011648.01.T01:five_prime_UTR
AATTCTCACAAAGATTTGAT+GGG 0.501458 3:-2988525 MsG0380011648.01.T01:CDS
AAATACCATTCTGGAGCTCT+AGG 0.501787 3:+2990463 None:intergenic
AATAATATTCGTGACCATCC+AGG 0.502847 3:-2989889 MsG0380011648.01.T01:CDS
CCAGTAAGCAAGCAAACAGC+AGG 0.504459 3:+2986830 None:intergenic
GTTCAACACAAAAGGTGCAT+TGG 0.507621 3:+2988645 None:intergenic
ATGGACATCAATACCTTTGG+TGG 0.508644 3:-2986867 MsG0380011648.01.T01:CDS
TAGAGTTGAAGGAGATGAAG+AGG 0.509194 3:-2992842 MsG0380011648.01.T01:five_prime_UTR
TTTACTCATGAATATGTCAA+TGG 0.510454 3:+2986970 None:intergenic
ATGGCTATGGAAGTGTTGCT+TGG 0.510622 3:-2992305 MsG0380011648.01.T01:five_prime_UTR
CAAGTGAACAATCACCCAAA+AGG 0.514277 3:+2986269 None:intergenic
GTGGAGTTACAATTGATGAT+TGG 0.515287 3:-2986593 MsG0380011648.01.T01:CDS
AATTAATTCTCTAGTTGCAA+AGG 0.519606 3:-2989968 MsG0380011648.01.T01:CDS
CAAGATGGAATGTTGTGGCC+TGG 0.520064 3:-2989913 MsG0380011648.01.T01:CDS
CAAGTATGCTAGAGATGAGA+TGG 0.520983 3:-2986617 MsG0380011648.01.T01:CDS
TGATCAGAATGGATGAATCA+AGG 0.521689 3:-2991886 MsG0380011648.01.T01:intron
ATGCAGCTTAGTAATACAGC+TGG 0.521742 3:-2986678 MsG0380011648.01.T01:intron
TGACCATCCAGGAATGATAC+AGG 0.525972 3:-2989878 MsG0380011648.01.T01:intron
GTCTTATTATTATGATCATA+CGG 0.527516 3:+2991813 None:intergenic
ATTGCTATGAGTATGAAAGA+AGG 0.527756 3:-2993949 MsG0380011648.01.T01:five_prime_UTR
GGTTTCAAAATGCATTGTCA+TGG 0.528438 3:-2987097 MsG0380011648.01.T01:CDS
CTATGAAGAGAAAACAGAAT+GGG 0.528905 3:-2987434 MsG0380011648.01.T01:CDS
TGATAATGATAATGAAGACT+TGG 0.529901 3:-2992211 MsG0380011648.01.T01:five_prime_UTR
GCCACAACTAATGACATGTA+TGG 0.531298 3:+2987456 None:intergenic
GACATAGGGGTTAATGCAGA+TGG 0.534361 3:-2994019 MsG0380011648.01.T01:five_prime_UTR
ATTCAAGGACCTACATATGT+TGG 0.534611 3:-2988331 MsG0380011648.01.T01:CDS
TTCATTATCATACGTCAAGA+TGG 0.534909 3:-2994681 MsG0380011648.01.T01:five_prime_UTR
AGCAGGAGCTCTAAATGCAC+TGG 0.535274 3:-2989475 MsG0380011648.01.T01:intron
TCAAAATGCATTGTCATGGA+TGG 0.535832 3:-2987093 MsG0380011648.01.T01:CDS
TGAGGGAAACCTATCTTGAC+AGG 0.536493 3:-2991646 MsG0380011648.01.T01:five_prime_UTR
CTATGGAAGTGTTGCTTGGA+AGG 0.537862 3:-2992301 MsG0380011648.01.T01:five_prime_UTR
AACCAAATTTAAGCGTCTCA+AGG 0.540508 3:-2993897 MsG0380011648.01.T01:five_prime_UTR
GTAGGAAATGAAGATGAAGA+TGG 0.547410 3:-2987607 MsG0380011648.01.T01:intron
TTGCTATGAGTATGAAAGAA+GGG 0.548342 3:-2993948 MsG0380011648.01.T01:five_prime_UTR
ACCAAATTTAAGCGTCTCAA+GGG 0.549386 3:-2993896 MsG0380011648.01.T01:intron
AGATAATGTTTGGTTTGAAG+TGG 0.550068 3:-2986419 MsG0380011648.01.T01:CDS
GATATAAAGGAGGATTAAAG+TGG 0.551140 3:-2986928 MsG0380011648.01.T01:CDS
AGATAGGTTTCCCTCATGAC+AGG 0.551671 3:+2991653 None:intergenic
ATTCTGAATCATCTGTTGCT+GGG 0.551927 3:-2988117 MsG0380011648.01.T01:CDS
AAGCAAAGACAGAACCAACT+TGG 0.553998 3:-2992261 MsG0380011648.01.T01:five_prime_UTR
TAAATGCTATTGTATATCCA+TGG 0.555496 3:-2986886 MsG0380011648.01.T01:CDS
GATTGTGTTGCATGGGAAAG+AGG 0.558016 3:-2988201 MsG0380011648.01.T01:CDS
TTCATGATGGATCCATTAGT+AGG 0.558058 3:-2988568 MsG0380011648.01.T01:CDS
CAAAGTGGTTTCCTGTCATG+AGG 0.558108 3:-2991664 MsG0380011648.01.T01:five_prime_UTR
GCCATACATGTCATTAGTTG+TGG 0.558942 3:-2987457 MsG0380011648.01.T01:CDS
ACATTCATTGCAAGCCACAA+AGG 0.562578 3:+2993991 None:intergenic
TGAATATGTCAATGGATCCA+AGG 0.563544 3:+2986978 None:intergenic
GAGTTACAATTGATGATTGG+TGG 0.563921 3:-2986590 MsG0380011648.01.T01:CDS
ATTATTATGATCATACGGTA+CGG 0.566323 3:+2991818 None:intergenic
TCTACAACAAGTATTTCAAT+GGG 0.566488 3:-2987002 MsG0380011648.01.T01:CDS
ACCAAAGGTATTGATGTCCA+TGG 0.567512 3:+2986869 None:intergenic
TGGAAAATTTATCATTCCTG+AGG 0.568091 3:-2986810 MsG0380011648.01.T01:intron
ATAAACATGAAAGGTTTGGA+TGG 0.568161 3:-2988355 MsG0380011648.01.T01:CDS
GAAGTGTTGCTTGGAAGGAT+AGG 0.570281 3:-2992296 MsG0380011648.01.T01:five_prime_UTR
TTGTCACATGCAATTAACAA+TGG 0.571900 3:-2986333 MsG0380011648.01.T01:CDS
AGGTCCTTGGAAGGATCCAT+TGG 0.577571 3:+2992336 None:intergenic
CAACTATGTGGAGAAGACAT+AGG 0.578330 3:-2994034 MsG0380011648.01.T01:five_prime_UTR
TTCTTATAGATAAACATGAA+AGG 0.582887 3:-2988364 MsG0380011648.01.T01:intron
CTAAGAAGGTTCCAGAAGAA+GGG 0.584015 3:-2989945 MsG0380011648.01.T01:CDS
GAATATGTCAATGGATCCAA+GGG 0.585167 3:+2986979 None:intergenic
GTGAGACACTAAAGCATGGT+GGG 0.586469 3:-2987501 MsG0380011648.01.T01:CDS
TCAAATAGGTATGAAAAGGA+AGG 0.587144 3:-2990724 MsG0380011648.01.T01:intron
TTTATTGCAAGCAAGACCAA+TGG 0.587191 3:-2992352 MsG0380011648.01.T01:five_prime_UTR
TTCTTGATCAGTTCTCAAAG+TGG 0.590558 3:-2991679 MsG0380011648.01.T01:five_prime_UTR
TGTATGTTTCTAGAGAAAAG+AGG 0.594706 3:-2989521 MsG0380011648.01.T01:CDS
GCTATGAAGAGAAAACAGAA+TGG 0.597797 3:-2987435 MsG0380011648.01.T01:CDS
CTATGAGTATGAAAGAAGGG+AGG 0.601580 3:-2993945 MsG0380011648.01.T01:five_prime_UTR
GAAGGGTGGACAATGCAAGA+TGG 0.602622 3:-2989928 MsG0380011648.01.T01:CDS
CACCCTGTTCCAACATATGT+AGG 0.605655 3:+2988322 None:intergenic
AAGACCAATGGATCCTTCCA+AGG 0.606156 3:-2992340 MsG0380011648.01.T01:five_prime_UTR
TCAATTGGTGAAAGTTGTGA+TGG 0.612350 3:+2990697 None:intergenic
ACTGTGTTTGCTGTCACTAG+AGG 0.613883 3:+2990637 None:intergenic
TTGAACCTAGAGCTCCAGAA+TGG 0.616357 3:-2990468 MsG0380011648.01.T01:CDS
AGAATTACCTCAGGAGACAT+GGG 0.617721 3:+2992748 None:intergenic
TTAGTAATACAGCTGGAATG+TGG 0.620528 3:-2986671 MsG0380011648.01.T01:CDS
AATCAAGGCAACCATTGTCA+AGG 0.621239 3:-2991871 MsG0380011648.01.T01:five_prime_UTR
GGTCAAACATGTCAACTATG+TGG 0.622399 3:-2994046 MsG0380011648.01.T01:five_prime_UTR
ATTTGGTATGGATATAAAGG+AGG 0.624865 3:-2986938 MsG0380011648.01.T01:CDS
TATGAGTATGAAAGAAGGGA+GGG 0.625897 3:-2993944 MsG0380011648.01.T01:five_prime_UTR
TGAAGACTTGGATAAGAGTG+TGG 0.626636 3:-2992199 MsG0380011648.01.T01:five_prime_UTR
TAAGCAGCTAGGTCCTTGGA+AGG 0.630204 3:+2992327 None:intergenic
AGAGTACAATATGCCACCAA+AGG 0.639909 3:+2986854 None:intergenic
TAACCTGTATCATTCCTGGA+TGG 0.640620 3:+2989875 None:intergenic
ATTGGCAACTTCCTTGACAA+TGG 0.640627 3:+2991860 None:intergenic
AGAAGGTTCCAGAAGAAGGG+TGG 0.640701 3:-2989942 MsG0380011648.01.T01:CDS
AAAGTGGTTTCCTGTCATGA+GGG 0.645331 3:-2991663 MsG0380011648.01.T01:five_prime_UTR
CTAGAAACATACACCAAACG+TGG 0.646967 3:+2989531 None:intergenic
TTCCATAGCCATAAGCAGCT+AGG 0.649165 3:+2992316 None:intergenic
AACAAAAGATGATGAAGACA+AGG 0.650022 3:-2986451 MsG0380011648.01.T01:CDS
GACCAAACAAGAACAATGGT+AGG 0.651032 3:+2986204 None:intergenic
TATGAAGAGAAAACAGAATG+GGG 0.653535 3:-2987433 MsG0380011648.01.T01:CDS
TCATTACATCAACAATAGCA+AGG 0.656151 3:-2988611 MsG0380011648.01.T01:CDS
GCAAATTCCCATGTCTCCTG+AGG 0.656290 3:-2992755 MsG0380011648.01.T01:intron
GATTGACCAAACAAGAACAA+TGG 0.662074 3:+2986200 None:intergenic
GACCTACATATGTTGGAACA+GGG 0.685727 3:-2988324 MsG0380011648.01.T01:CDS
CAATGCAAGATGGAATGTTG+TGG 0.693503 3:-2989918 MsG0380011648.01.T01:CDS
ATTCATTGCAAGCCACAAAG+GGG 0.721890 3:+2993993 None:intergenic
GATGGTGAGACACTAAAGCA+TGG 0.742092 3:-2987505 MsG0380011648.01.T01:CDS
ACTATGTGGAGAAGACATAG+GGG 0.754009 3:-2994032 MsG0380011648.01.T01:five_prime_UTR
GGTGAGACACTAAAGCATGG+TGG 0.756625 3:-2987502 MsG0380011648.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATATTATTTATGTAAATT+TGG - Chr3:2986406-2986425 MsG0380011648.01.T01:CDS 10.0%
!! ATAATTGTTGAATTTATTAA+AGG + Chr3:2988440-2988459 None:intergenic 10.0%
!! ATTTACATAAATAATATGTA+TGG + Chr3:2986405-2986424 None:intergenic 10.0%
!! TAAAATGAATATTATACATA+TGG - Chr3:2988867-2988886 MsG0380011648.01.T01:intron 10.0%
!!! TATGTTTTTTATTTTCTTTT+TGG - Chr3:2987100-2987119 MsG0380011648.01.T01:CDS 10.0%
!!! TTTTAAAATACTCATTAATA+TGG - Chr3:2987860-2987879 MsG0380011648.01.T01:intron 10.0%
!! AAAAAAAAAAAAAGAGATAG+AGG + Chr3:2987352-2987371 None:intergenic 15.0%
!! AAAATTATACCATATTATGA+AGG + Chr3:2989965-2989984 None:intergenic 15.0%
!! AAATAAAAAATTGAGAACAA+AGG - Chr3:2991809-2991828 MsG0380011648.01.T01:five_prime_UTR 15.0%
!! AACCAAAAATAAATATGAAA+TGG - Chr3:2987905-2987924 MsG0380011648.01.T01:intron 15.0%
!! AATAAAAAACAATTGAAGAA+CGG + Chr3:2991594-2991613 None:intergenic 15.0%
!! AATAAAAAATTGAGAACAAA+GGG - Chr3:2991810-2991829 MsG0380011648.01.T01:five_prime_UTR 15.0%
!! AATCGTAAAATTGAAAATAA+AGG - Chr3:2986613-2986632 MsG0380011648.01.T01:CDS 15.0%
!! AATGTATATTTGACATAATT+TGG - Chr3:2990555-2990574 MsG0380011648.01.T01:exon 15.0%
!! ATCGTAAAATTGAAAATAAA+GGG - Chr3:2986614-2986633 MsG0380011648.01.T01:CDS 15.0%
!! TATATTAAACATAATTGCTA+TGG - Chr3:2994463-2994482 MsG0380011648.01.T01:intron 15.0%
!! TCAATCTTAATATTAGTATA+TGG - Chr3:2990785-2990804 MsG0380011648.01.T01:intron 15.0%
!! TCTTTGTAATAAATACTTAA+AGG - Chr3:2987205-2987224 MsG0380011648.01.T01:intron 15.0%
!!! AGTTGTTTTATTTTGTTTTT+TGG - Chr3:2989246-2989265 MsG0380011648.01.T01:intron 15.0%
!!! ATACTTTGTTATTTAGTTAA+AGG - Chr3:2986299-2986318 MsG0380011648.01.T01:CDS 15.0%
!!! CTATCTCTTTTTTTTTTTTT+TGG - Chr3:2987352-2987371 MsG0380011648.01.T01:intron 15.0%
!!! TATTTTCAATTTTACGATTT+TGG + Chr3:2986612-2986631 None:intergenic 15.0%
!!! TTTTGGATTTTAATTTTGAA+TGG - Chr3:2992416-2992435 MsG0380011648.01.T01:five_prime_UTR 15.0%
!!! TTTTTTACAACTTAATAGAT+CGG - Chr3:2987525-2987544 MsG0380011648.01.T01:CDS 15.0%
!! AAAAGTTCAACTGATTAAAT+CGG - Chr3:2992805-2992824 MsG0380011648.01.T01:five_prime_UTR 20.0%
!! AACAAATGTATTTGTTTGAT+TGG + Chr3:2992350-2992369 None:intergenic 20.0%
!! AATCAATTAAACCTAGATTA+CGG - Chr3:2992965-2992984 MsG0380011648.01.T01:intron 20.0%
!! AATTTAGATTAAATGAGTTC+TGG + Chr3:2993185-2993204 None:intergenic 20.0%
!! AATTTATATGCTGTATTTGT+AGG - Chr3:2994299-2994318 MsG0380011648.01.T01:intron 20.0%
!! ATAAAAAATTGAGAACAAAG+GGG - Chr3:2991811-2991830 MsG0380011648.01.T01:five_prime_UTR 20.0%
!! ATACAATCATTTGAATTAAG+AGG - Chr3:2991738-2991757 MsG0380011648.01.T01:five_prime_UTR 20.0%
!! ATGAGAATAATTCATTCATT+TGG - Chr3:2989937-2989956 MsG0380011648.01.T01:CDS 20.0%
!! ATTTATAAAACCTCAAATGT+AGG - Chr3:2993202-2993221 MsG0380011648.01.T01:intron 20.0%
!! CAAAAATAAATATGAAATGG+AGG - Chr3:2987908-2987927 MsG0380011648.01.T01:intron 20.0%
!! CAAAAGTTAGTTAAGAAATT+TGG - Chr3:2993262-2993281 MsG0380011648.01.T01:intron 20.0%
!! CAAACATTGTATTAATCTAA+CGG - Chr3:2991459-2991478 MsG0380011648.01.T01:intron 20.0%
!! GAAACTAAAATGTTTATAAG+TGG - Chr3:2989293-2989312 MsG0380011648.01.T01:intron 20.0%
!! GCAGATAAAAAAAAATCTAT+TGG + Chr3:2987330-2987349 None:intergenic 20.0%
!! TAAAATTGTGATGTTAGATT+TGG - Chr3:2989556-2989575 MsG0380011648.01.T01:CDS 20.0%
!! TAATTCAAATAGGTATGAAA+AGG - Chr3:2990099-2990118 MsG0380011648.01.T01:intron 20.0%
!! TACAAAAGATACAAGTAAAA+GGG - Chr3:2987302-2987321 MsG0380011648.01.T01:intron 20.0%
!! TAGAAATTTAAACATCTTGA+AGG + Chr3:2988272-2988291 None:intergenic 20.0%
!! TATACTATTTCGTAAATTTG+AGG + Chr3:2989397-2989416 None:intergenic 20.0%
!! TGACAAGTTAAAATATTATG+TGG - Chr3:2991023-2991042 MsG0380011648.01.T01:intron 20.0%
!! TTCTTATAGATAAACATGAA+AGG - Chr3:2992463-2992482 MsG0380011648.01.T01:intron 20.0%
!! TTTAATATAAGCAATGTTGT+TGG + Chr3:2994452-2994471 None:intergenic 20.0%
!! TTTATAAATAGTAGCGATAA+AGG - Chr3:2989357-2989376 MsG0380011648.01.T01:intron 20.0%
!! TTTATTACAAAGAGCAAAAT+AGG + Chr3:2987198-2987217 None:intergenic 20.0%
!! TTTCATTATGTGAAAATGTT+AGG - Chr3:2993063-2993082 MsG0380011648.01.T01:intron 20.0%
!!! ATCTAACATCACAATTTTAA+AGG + Chr3:2989555-2989574 None:intergenic 20.0%
!!! ATTTAATCAGTTGAACTTTT+CGG + Chr3:2992805-2992824 None:intergenic 20.0%
!!! CAACTTTTTCTAATTCAAAT+AGG - Chr3:2990089-2990108 MsG0380011648.01.T01:intron 20.0%
!!! CATTTTCACATAATGAAATT+AGG + Chr3:2993061-2993080 None:intergenic 20.0%
!!! CTAAGGTTTAAATACATTTT+TGG + Chr3:2986643-2986662 None:intergenic 20.0%
!!! CTCCATTTCATATTTATTTT+TGG + Chr3:2987910-2987929 None:intergenic 20.0%
!!! GTCAAATATACATTATTTTC+AGG + Chr3:2990549-2990568 None:intergenic 20.0%
!!! GTCAAATCCAATTAAAATTT+TGG - Chr3:2993099-2993118 MsG0380011648.01.T01:intron 20.0%
!!! GTCTTATTATTATGATCATA+CGG + Chr3:2989017-2989036 None:intergenic 20.0%
!!! TATGTTACTTTTCAAGAATT+TGG - Chr3:2986376-2986395 MsG0380011648.01.T01:CDS 20.0%
!!! TATTCTACTTTTCACTAATT+TGG + Chr3:2986583-2986602 None:intergenic 20.0%
!!! TGATTTTAAGACATTACTTT+TGG + Chr3:2992780-2992799 None:intergenic 20.0%
!!! TGTGGTTAATTATAATTTTC+AGG + Chr3:2990608-2990627 None:intergenic 20.0%
!!! TGTTTTTAATTTATTTGTCG+AGG - Chr3:2992072-2992091 MsG0380011648.01.T01:intron 20.0%
!!! TTCATTTTCTTCAATCTATT+AGG + Chr3:2992019-2992038 None:intergenic 20.0%
!!! TTTCAACCTTATGATTTTTA+CGG + Chr3:2990018-2990037 None:intergenic 20.0%
!!! TTTCGTTGTTTTTTTTTTAC+TGG + Chr3:2991859-2991878 None:intergenic 20.0%
!!! TTTTTTCGTTCAAATTGTAA+AGG + Chr3:2989663-2989682 None:intergenic 20.0%
! AAAAAAATCCAGAGACTAAT+AGG - Chr3:2986507-2986526 MsG0380011648.01.T01:CDS 25.0%
! AAAAAACCCTCCAAAATTAA+TGG + Chr3:2986462-2986481 None:intergenic 25.0%
! AAAAAATCCAGAGACTAATA+GGG - Chr3:2986508-2986527 MsG0380011648.01.T01:CDS 25.0%
! AAAAAGAGTGATACTTACAA+AGG + Chr3:2988671-2988690 None:intergenic 25.0%
! AAAACAAGACATGTAATTGT+TGG - Chr3:2992584-2992603 MsG0380011648.01.T01:intron 25.0%
! AACCATCTTCATTATATCTA+AGG - Chr3:2987797-2987816 MsG0380011648.01.T01:intron 25.0%
! AACGTTAAATTACATGTTGA+GGG + Chr3:2991776-2991795 None:intergenic 25.0%
! AATAGTTATGCATGATGATT+TGG - Chr3:2986716-2986735 MsG0380011648.01.T01:intron 25.0%
! AATTAATTCTCTAGTTGCAA+AGG - Chr3:2990859-2990878 MsG0380011648.01.T01:intron 25.0%
! AATTCTCACAAAGATTTGAT+GGG - Chr3:2992302-2992321 MsG0380011648.01.T01:five_prime_UTR 25.0%
! AATTGTAGACGTTCAATTTA+AGG - Chr3:2989591-2989610 MsG0380011648.01.T01:intron 25.0%
! AATTTCGACATCAATTTAGA+TGG + Chr3:2990732-2990751 None:intergenic 25.0%
! ACATGCATTGTTATATGTAA+GGG + Chr3:2987450-2987469 None:intergenic 25.0%
! ACTAAAATGTTTATAAGTGG+TGG - Chr3:2989296-2989315 MsG0380011648.01.T01:intron 25.0%
! AGACAAATGTTGAATATGTT+TGG - Chr3:2987829-2987848 MsG0380011648.01.T01:intron 25.0%
! AGATCTATATATTGTATTCC+TGG - Chr3:2993757-2993776 MsG0380011648.01.T01:intron 25.0%
! ATAATAAGACTGATTGTTCT+TGG - Chr3:2989027-2989046 MsG0380011648.01.T01:intron 25.0%
! ATAGATAAACATGAAAGGTT+TGG - Chr3:2992468-2992487 MsG0380011648.01.T01:intron 25.0%
! ATCAATTAAACCTAGATTAC+GGG - Chr3:2992966-2992985 MsG0380011648.01.T01:intron 25.0%
! ATGTTGAACTTCTTACAAAA+AGG + Chr3:2990340-2990359 None:intergenic 25.0%
! ATTATTATGATCATACGGTA+CGG + Chr3:2989012-2989031 None:intergenic 25.0%
! ATTGACGTTTCTCAATTTAA+TGG + Chr3:2989425-2989444 None:intergenic 25.0%
! ATTGTAGACGTTCAATTTAA+GGG - Chr3:2989592-2989611 MsG0380011648.01.T01:intron 25.0%
! CAAGTAATCTACAAATAGTT+TGG - Chr3:2989216-2989235 MsG0380011648.01.T01:intron 25.0%
! CGCATGTATATATTAAACTA+AGG + Chr3:2986660-2986679 None:intergenic 25.0%
! CGTTAGATTAATACAATGTT+TGG + Chr3:2991461-2991480 None:intergenic 25.0%
! CTGGATTCATAATTCTATAT+TGG + Chr3:2989062-2989081 None:intergenic 25.0%
! GAACATAATGAGATAATGTT+TGG - Chr3:2994398-2994417 MsG0380011648.01.T01:intron 25.0%
! GACTTAGAATAGAAAAGTAA+TGG + Chr3:2993442-2993461 None:intergenic 25.0%
! GTACAAAAGATACAAGTAAA+AGG - Chr3:2987301-2987320 MsG0380011648.01.T01:intron 25.0%
! GTAGTCACAAATATATCAAT+TGG + Chr3:2990148-2990167 None:intergenic 25.0%
! GTTACAGAAGATATATTAAC+AGG - Chr3:2993709-2993728 MsG0380011648.01.T01:intron 25.0%
! TAAATGCTATTGTATATCCA+TGG - Chr3:2993941-2993960 MsG0380011648.01.T01:five_prime_UTR 25.0%
! TAACGTTAAATTACATGTTG+AGG + Chr3:2991777-2991796 None:intergenic 25.0%
! TATTTGTCGAGGTTTAAATT+TGG - Chr3:2992083-2992102 MsG0380011648.01.T01:intron 25.0%
! TCAATAAGTAAGTGTTTCAT+TGG + Chr3:2989486-2989505 None:intergenic 25.0%
! TCATCAAATAACCTTTCTAA+TGG - Chr3:2993802-2993821 MsG0380011648.01.T01:intron 25.0%
! TCTACAACAAGTATTTCAAT+GGG - Chr3:2993825-2993844 MsG0380011648.01.T01:intron 25.0%
! TCTATAGTCTATAATACATG+TGG - Chr3:2991179-2991198 MsG0380011648.01.T01:intron 25.0%
! TCTCTTAACAAGTAACTTAA+GGG - Chr3:2991059-2991078 MsG0380011648.01.T01:intron 25.0%
! TGATTTCTTGAGAGTTATTA+TGG - Chr3:2991613-2991632 MsG0380011648.01.T01:intron 25.0%
! TGTATTATAGACTATAGAGA+TGG + Chr3:2991177-2991196 None:intergenic 25.0%
! TTCTCTTAACAAGTAACTTA+AGG - Chr3:2991058-2991077 MsG0380011648.01.T01:intron 25.0%
! TTCTTGAAAAGTAACATAGA+AGG + Chr3:2986374-2986393 None:intergenic 25.0%
! TTGAAGAAAATGAAGATGAT+CGG - Chr3:2992025-2992044 MsG0380011648.01.T01:intron 25.0%
! TTTACTCATGAATATGTCAA+TGG + Chr3:2993860-2993879 None:intergenic 25.0%
!! AACATTAGTTTCCCAAATAA+TGG + Chr3:2994536-2994555 None:intergenic 25.0%
!! CACTTTCAAACCATTAATTT+TGG - Chr3:2986449-2986468 MsG0380011648.01.T01:CDS 25.0%
!! CAGACTTAGATACATTTTTA+GGG - Chr3:2990984-2991003 MsG0380011648.01.T01:intron 25.0%
!! CTAGGTTTAATTGATTCAAT+CGG + Chr3:2992961-2992980 None:intergenic 25.0%
!! GAAACTAATGTTTTCCTTTT+GGG - Chr3:2994544-2994563 MsG0380011648.01.T01:intron 25.0%
!! GATTTGAAAGACGTTTATTT+TGG + Chr3:2989464-2989483 None:intergenic 25.0%
!! TATGTTTATCAGGTTTTCTT+AGG - Chr3:2991236-2991255 MsG0380011648.01.T01:intron 25.0%
!! TGATAATGATAATGAAGACT+TGG - Chr3:2988616-2988635 MsG0380011648.01.T01:CDS 25.0%
!! TGTATCTTTTGTACAAAAAG+TGG + Chr3:2987295-2987314 None:intergenic 25.0%
!! TTAAGTTACTTGTTAAGAGA+AGG + Chr3:2991059-2991078 None:intergenic 25.0%
!! TTCAAACCATTAATTTTGGA+GGG - Chr3:2986453-2986472 MsG0380011648.01.T01:CDS 25.0%
!! TTCAACCTTATGATTTTTAC+GGG + Chr3:2990017-2990036 None:intergenic 25.0%
!! TTCCAATATCACTCTTTTAT+GGG - Chr3:2987617-2987636 MsG0380011648.01.T01:intron 25.0%
!! TTTCAAACCATTAATTTTGG+AGG - Chr3:2986452-2986471 MsG0380011648.01.T01:CDS 25.0%
!! TTTCCAATATCACTCTTTTA+TGG - Chr3:2987616-2987635 MsG0380011648.01.T01:intron 25.0%
!!! AATCCACATTCTTCTAAAAT+TGG + Chr3:2994719-2994738 None:intergenic 25.0%
!!! AATTTTAGAAGAATGTGGAT+TGG - Chr3:2994718-2994737 MsG0380011648.01.T01:five_prime_UTR 25.0%
!!! CAAAGTTTATTAGTTTGTTG+TGG - Chr3:2988103-2988122 MsG0380011648.01.T01:intron 25.0%
!!! TAACAATGGTTTTGAATCAT+GGG - Chr3:2994508-2994527 MsG0380011648.01.T01:intron 25.0%
!!! TCTGGATTTTTTTACACTTT+TGG + Chr3:2986500-2986519 None:intergenic 25.0%
!!! TTAACAATGGTTTTGAATCA+TGG - Chr3:2994507-2994526 MsG0380011648.01.T01:intron 25.0%
!!! TTTTCTATTCTAAGTCTTGT+TGG - Chr3:2993446-2993465 MsG0380011648.01.T01:intron 25.0%
!!! TTTTTTTGGTGATTGAAGTT+AGG + Chr3:2991332-2991351 None:intergenic 25.0%
AAACATTGTCCTATTTGGTA+TGG - Chr3:2993877-2993896 MsG0380011648.01.T01:intron 30.0%
AAAGGTGAATTCTAGTCAAT+AGG + Chr3:2987386-2987405 None:intergenic 30.0%
AAATCGGTAAGTTAGTTGAT+TGG - Chr3:2992821-2992840 MsG0380011648.01.T01:five_prime_UTR 30.0%
AACAAAAGATGATGAAGACA+AGG - Chr3:2994376-2994395 MsG0380011648.01.T01:intron 30.0%
AAGTAAATAAGCCTGGATTA+AGG - Chr3:2989270-2989289 MsG0380011648.01.T01:intron 30.0%
AATGTGAGAGATTTCTCAAT+AGG + Chr3:2993129-2993148 None:intergenic 30.0%
ACAATCTCACTAATACAGTT+AGG + Chr3:2989836-2989855 None:intergenic 30.0%
AGATTAGTAGATTCTTGGAT+CGG + Chr3:2988717-2988736 None:intergenic 30.0%
AGTAAATAAGCCTGGATTAA+GGG - Chr3:2989271-2989290 MsG0380011648.01.T01:intron 30.0%
ATAAACATGAAAGGTTTGGA+TGG - Chr3:2992472-2992491 MsG0380011648.01.T01:intron 30.0%
ATCCCATAAAAGAGTGATAT+TGG + Chr3:2987622-2987641 None:intergenic 30.0%
ATCTTCATTTCCTACATTTG+AGG + Chr3:2993215-2993234 None:intergenic 30.0%
ATTAACCACATTCACATATG+TGG - Chr3:2990618-2990637 MsG0380011648.01.T01:five_prime_UTR 30.0%
ATTGCTATGAGTATGAAAGA+AGG - Chr3:2986878-2986897 MsG0380011648.01.T01:CDS 30.0%
ATTTGGTATGGATATAAAGG+AGG - Chr3:2993889-2993908 MsG0380011648.01.T01:intron 30.0%
CAATTCTCACAAAGATTTGA+TGG - Chr3:2992301-2992320 MsG0380011648.01.T01:five_prime_UTR 30.0%
CACTTATCATATAAGCGTTT+AGG - Chr3:2993490-2993509 MsG0380011648.01.T01:intron 30.0%
CAGTGTAACTATATATGTGT+GGG + Chr3:2986695-2986714 None:intergenic 30.0%
CATTGACAATTCTATGAAAC+AGG - Chr3:2992138-2992157 MsG0380011648.01.T01:intron 30.0%
CATTTCCCGTAAAAATCATA+AGG - Chr3:2990009-2990028 MsG0380011648.01.T01:intron 30.0%
CCTATTTGGTATGGATATAA+AGG - Chr3:2993886-2993905 MsG0380011648.01.T01:intron 30.0%
CCTTTATATCCATACCAAAT+AGG + Chr3:2993889-2993908 None:intergenic 30.0%
CGATATCACAAGAATATAGT+CGG + Chr3:2991700-2991719 None:intergenic 30.0%
CTACAAGAAAATCACAGATA+CGG + Chr3:2994069-2994088 None:intergenic 30.0%
CTATGAAGAGAAAACAGAAT+GGG - Chr3:2993393-2993412 MsG0380011648.01.T01:intron 30.0%
CTCTTCACTATGCAATAATT+GGG + Chr3:2989746-2989765 None:intergenic 30.0%
GACATGCATTGTTATATGTA+AGG + Chr3:2987451-2987470 None:intergenic 30.0%
GATATAAAGGAGGATTAAAG+TGG - Chr3:2993899-2993918 MsG0380011648.01.T01:five_prime_UTR 30.0%
GTAGATGTCATATGTTTATC+AGG - Chr3:2991226-2991245 MsG0380011648.01.T01:intron 30.0%
GTATGACTGGAAAGAATAAT+AGG - Chr3:2994597-2994616 MsG0380011648.01.T01:intron 30.0%
GTCCTTAGATATAATGAAGA+TGG + Chr3:2987802-2987821 None:intergenic 30.0%
GTCTACAACAAGTATTTCAA+TGG - Chr3:2993824-2993843 MsG0380011648.01.T01:intron 30.0%
GTGTAACTAACTAGATAACT+TGG + Chr3:2989810-2989829 None:intergenic 30.0%
TACTCTTTACAAGAGATTCA+AGG + Chr3:2987562-2987581 None:intergenic 30.0%
TAGAATTGTCAATGCATTAG+AGG + Chr3:2992132-2992151 None:intergenic 30.0%
TAGTCTAAGTTCAACACAAA+AGG + Chr3:2992193-2992212 None:intergenic 30.0%
TATGAAGAGAAAACAGAATG+GGG - Chr3:2993394-2993413 MsG0380011648.01.T01:intron 30.0%
TCAAATAGGTATGAAAAGGA+AGG - Chr3:2990103-2990122 MsG0380011648.01.T01:intron 30.0%
TCAGTGTAACTATATATGTG+TGG + Chr3:2986696-2986715 None:intergenic 30.0%
TCATAGCAATTTCTACAAAC+AGG + Chr3:2986868-2986887 None:intergenic 30.0%
TCATTACATCAACAATAGCA+AGG - Chr3:2992216-2992235 MsG0380011648.01.T01:five_prime_UTR 30.0%
TCTCTTCACTATGCAATAAT+TGG + Chr3:2989747-2989766 None:intergenic 30.0%
TCTTGTGAAAATGATCAGAA+TGG - Chr3:2988930-2988949 MsG0380011648.01.T01:intron 30.0%
TGAGTAAACATTGTCCTATT+TGG - Chr3:2993872-2993891 MsG0380011648.01.T01:intron 30.0%
TGAGTAGATGCAATGAAAAT+AGG + Chr3:2993295-2993314 None:intergenic 30.0%
TGGAAAATTTATCATTCCTG+AGG - Chr3:2994017-2994036 MsG0380011648.01.T01:five_prime_UTR 30.0%
TGTCAGTAATATGTGAGATT+TGG - Chr3:2989109-2989128 MsG0380011648.01.T01:intron 30.0%
TGTTGAATATGTTTGGACTT+TGG - Chr3:2987836-2987855 MsG0380011648.01.T01:intron 30.0%
TTAGACTGATCACCTTTATT+GGG - Chr3:2988194-2988213 MsG0380011648.01.T01:CDS 30.0%
TTCAATCACCAAAAAAAAGC+AGG - Chr3:2991335-2991354 MsG0380011648.01.T01:intron 30.0%
TTCATTATCATACGTCAAGA+TGG - Chr3:2986146-2986165 MsG0380011648.01.T01:CDS 30.0%
TTCTGAATTTGCAAGGAAAT+GGG - Chr3:2990312-2990331 MsG0380011648.01.T01:intron 30.0%
TTGAAAGAGAAATTGCTTTG+TGG + Chr3:2991677-2991696 None:intergenic 30.0%
TTGCTATGAGTATGAAAGAA+GGG - Chr3:2986879-2986898 MsG0380011648.01.T01:CDS 30.0%
TTGTCACATGCAATTAACAA+TGG - Chr3:2994494-2994513 MsG0380011648.01.T01:intron 30.0%
TTTAACCACATATGTGAATG+TGG + Chr3:2990626-2990645 None:intergenic 30.0%
TTTAGAAGACAAGCACTTTA+TGG - Chr3:2992532-2992551 MsG0380011648.01.T01:intron 30.0%
TTTCATTGCATCTACTCAAT+TGG - Chr3:2993297-2993316 MsG0380011648.01.T01:intron 30.0%
TTTGTAGATTACTTGCCTTA+AGG + Chr3:2989211-2989230 None:intergenic 30.0%
! AAACTTTGAAGAATTACCTC+AGG + Chr3:2988091-2988110 None:intergenic 30.0%
! ACTAGAATTCACCTTTTACA+AGG - Chr3:2987390-2987409 MsG0380011648.01.T01:intron 30.0%
! AGGTTTTCTTAGGTGAAAAT+GGG - Chr3:2991246-2991265 MsG0380011648.01.T01:intron 30.0%
! ATTTTAAATGCAGTTCTTCC+AGG + Chr3:2993778-2993797 None:intergenic 30.0%
! CAAATCCTTTTTCCTACTAA+TGG + Chr3:2992274-2992293 None:intergenic 30.0%
! CATTTGGTTCCTTCATAATA+TGG - Chr3:2989953-2989972 MsG0380011648.01.T01:CDS 30.0%
! CTTATGATTTTTACGGGAAA+TGG + Chr3:2990011-2990030 None:intergenic 30.0%
! CTTTTACAAGGTGAATAAGT+GGG - Chr3:2987402-2987421 MsG0380011648.01.T01:intron 30.0%
! CTTTTCTCATATTACCAAGT+TGG + Chr3:2988583-2988602 None:intergenic 30.0%
! GAAGTCTAAGTTTGAGTTAA+TGG - Chr3:2992666-2992685 MsG0380011648.01.T01:intron 30.0%
! GAGAATGAATTCGATTTTGA+TGG - Chr3:2988028-2988047 MsG0380011648.01.T01:intron 30.0%
! GCAGACTTAGATACATTTTT+AGG - Chr3:2990983-2991002 MsG0380011648.01.T01:intron 30.0%
! GGAAACTAATGTTTTCCTTT+TGG - Chr3:2994543-2994562 MsG0380011648.01.T01:intron 30.0%
! GTTTGGATTTTATTGTTGAG+AGG + Chr3:2991444-2991463 None:intergenic 30.0%
! TCATGTTATGTTTCTGATGA+TGG - Chr3:2990253-2990272 MsG0380011648.01.T01:intron 30.0%
! TTAATTACCCTATTAGTCTC+TGG + Chr3:2986518-2986537 None:intergenic 30.0%
! TTTACCAGACTGAAGTATTA+GGG - Chr3:2989984-2990003 MsG0380011648.01.T01:CDS 30.0%
! TTTTACAAGGTGAATAAGTG+GGG - Chr3:2987403-2987422 MsG0380011648.01.T01:intron 30.0%
!! AAAATTGTTTTTCGTCGTTC+AGG - Chr3:2993666-2993685 MsG0380011648.01.T01:intron 30.0%
!! AATAGTCTTGTGCAACATTA+AGG - Chr3:2989510-2989529 MsG0380011648.01.T01:CDS 30.0%
!! AATGAGCAATTTTGGGTAAT+TGG - Chr3:2994263-2994282 MsG0380011648.01.T01:intron 30.0%
!! AGATAATGTTTGGTTTGAAG+TGG - Chr3:2994408-2994427 MsG0380011648.01.T01:intron 30.0%
!! AGGCATGCCAAAATTTTAAT+TGG + Chr3:2993109-2993128 None:intergenic 30.0%
!! AGTTTTGTCATGTGAAAAGA+AGG - Chr3:2988318-2988337 MsG0380011648.01.T01:CDS 30.0%
!! ATAGTCTTGTGCAACATTAA+GGG - Chr3:2989511-2989530 MsG0380011648.01.T01:CDS 30.0%
!! TGTATGTTTCTAGAGAAAAG+AGG - Chr3:2991306-2991325 MsG0380011648.01.T01:intron 30.0%
!! TTAGTTGATTGGTTTGATGT+CGG - Chr3:2992832-2992851 MsG0380011648.01.T01:five_prime_UTR 30.0%
!! TTGATTTGACTTGATGGAAT+TGG + Chr3:2988988-2989007 None:intergenic 30.0%
!! TTTTACCAGACTGAAGTATT+AGG - Chr3:2989983-2990002 MsG0380011648.01.T01:CDS 30.0%
!! TTTTGGAAAGTAAATAAGCC+TGG - Chr3:2989263-2989282 MsG0380011648.01.T01:intron 30.0%
!!! AACAATGGTTTTGAATCATG+GGG - Chr3:2994509-2994528 MsG0380011648.01.T01:intron 30.0%
!!! AGGGTTTTTTTTGACTCAAA+AGG - Chr3:2986472-2986491 MsG0380011648.01.T01:CDS 30.0%
!!! ATTTTAGTTTCCCTTAATCC+AGG + Chr3:2989284-2989303 None:intergenic 30.0%
!!! GGGTTTTTTTTGACTCAAAA+GGG - Chr3:2986473-2986492 MsG0380011648.01.T01:CDS 30.0%
!!! TTAAATTTGGTTTTGCACTG+AGG + Chr3:2986922-2986941 None:intergenic 30.0%
!!! TTGAAAGACGTTTATTTTGG+TGG + Chr3:2989461-2989480 None:intergenic 30.0%
AAAATATTATGTGGCCCTAG+TGG - Chr3:2991032-2991051 MsG0380011648.01.T01:intron 35.0%
AAAGCATATGCATTGTCTAC+TGG + Chr3:2989081-2989100 None:intergenic 35.0%
AAAGGTTTGGATGGTATTCA+AGG - Chr3:2992481-2992500 MsG0380011648.01.T01:intron 35.0%
AACATAATTGCTATGGTTGC+TGG - Chr3:2994470-2994489 MsG0380011648.01.T01:intron 35.0%
AACCAAATTTAAGCGTCTCA+AGG - Chr3:2986930-2986949 MsG0380011648.01.T01:CDS 35.0%
AACTATGTGGAGAAGACATA+GGG - Chr3:2986794-2986813 MsG0380011648.01.T01:intron 35.0%
AATAATATTCGTGACCATCC+AGG - Chr3:2990938-2990957 MsG0380011648.01.T01:intron 35.0%
AATAGATTACCCTGCTGAAA+AGG - Chr3:2990228-2990247 MsG0380011648.01.T01:intron 35.0%
AATAGTGCAGGAGAAATTGA+AGG - Chr3:2991959-2991978 MsG0380011648.01.T01:intron 35.0%
AATCATGGGGACCATTATTT+GGG - Chr3:2994522-2994541 MsG0380011648.01.T01:intron 35.0%
AATTGTCAATGCATTAGAGG+CGG + Chr3:2992129-2992148 None:intergenic 35.0%
AATTTCTCCTGCACTATTCA+CGG + Chr3:2991957-2991976 None:intergenic 35.0%
ACAGATTTGCAAGAGTTAGA+TGG - Chr3:2986760-2986779 MsG0380011648.01.T01:intron 35.0%
ACCAAATTTAAGCGTCTCAA+GGG - Chr3:2986931-2986950 MsG0380011648.01.T01:CDS 35.0%
AGAACGGTTCACTACAATTT+CGG + Chr3:2991578-2991597 None:intergenic 35.0%
AGAAGCAATGTGTTTCATGA+TGG - Chr3:2992246-2992265 MsG0380011648.01.T01:five_prime_UTR 35.0%
AGCAGCAATGTTAACATTTG+AGG - Chr3:2990276-2990295 MsG0380011648.01.T01:intron 35.0%
ATCATTCTTCTCTGTCTTGT+GGG - Chr3:2994658-2994677 MsG0380011648.01.T01:intron 35.0%
ATGTAGTCCACTACTTTATG+TGG + Chr3:2987682-2987701 None:intergenic 35.0%
ATTCAAGGACCTACATATGT+TGG - Chr3:2992496-2992515 MsG0380011648.01.T01:intron 35.0%
ATTCTGAATCATCTGTTGCT+GGG - Chr3:2992710-2992729 MsG0380011648.01.T01:intron 35.0%
CAACCATTAGATCAATCCAA+GGG - Chr3:2991931-2991950 MsG0380011648.01.T01:intron 35.0%
CAAGAATCTACTAATCTGAG+GGG - Chr3:2988720-2988739 MsG0380011648.01.T01:intron 35.0%
CACTTGTTTCCATTCCTTAA+AGG - Chr3:2994575-2994594 MsG0380011648.01.T01:intron 35.0%
CCAAGAATCTACTAATCTGA+GGG - Chr3:2988719-2988738 MsG0380011648.01.T01:intron 35.0%
CCACTTATTCACCTTGTAAA+AGG + Chr3:2987404-2987423 None:intergenic 35.0%
CCTATGAAATAGCATCCTAA+TGG - Chr3:2991384-2991403 MsG0380011648.01.T01:intron 35.0%
CTGAAACTTCTGAATTTGCA+AGG - Chr3:2990305-2990324 MsG0380011648.01.T01:intron 35.0%
CTTAGCGATCAAATTAGAGA+CGG - Chr3:2989711-2989730 MsG0380011648.01.T01:intron 35.0%
CTTCTGAATTTGCAAGGAAA+TGG - Chr3:2990311-2990330 MsG0380011648.01.T01:intron 35.0%
GAATATGTCAATGGATCCAA+GGG + Chr3:2993851-2993870 None:intergenic 35.0%
GAGGATTAAAGTGGTTAGAA+AGG - Chr3:2993908-2993927 MsG0380011648.01.T01:five_prime_UTR 35.0%
GATTGACCAAACAAGAACAA+TGG + Chr3:2994630-2994649 None:intergenic 35.0%
GCTATGAAGAGAAAACAGAA+TGG - Chr3:2993392-2993411 MsG0380011648.01.T01:intron 35.0%
GGTACGTACTTTCAAAATTG+TGG + Chr3:2987661-2987680 None:intergenic 35.0%
GGTTTCAAAATGCATTGTCA+TGG - Chr3:2993730-2993749 MsG0380011648.01.T01:intron 35.0%
GTAGGAAATGAAGATGAAGA+TGG - Chr3:2993220-2993239 MsG0380011648.01.T01:intron 35.0%
GTGTTTATGACTGTTTGCAT+TGG + Chr3:2993632-2993651 None:intergenic 35.0%
GTTAGACTGATCACCTTTAT+TGG - Chr3:2988193-2988212 MsG0380011648.01.T01:CDS 35.0%
TACAAGCTAGAACCCAATAA+AGG + Chr3:2988209-2988228 None:intergenic 35.0%
TAGACAATGCATATGCTTTG+TGG - Chr3:2989082-2989101 MsG0380011648.01.T01:intron 35.0%
TATGAGTATGAAAGAAGGGA+GGG - Chr3:2986883-2986902 MsG0380011648.01.T01:CDS 35.0%
TCAAAATGCATTGTCATGGA+TGG - Chr3:2993734-2993753 MsG0380011648.01.T01:intron 35.0%
TCAACCATTAGATCAATCCA+AGG - Chr3:2991930-2991949 MsG0380011648.01.T01:intron 35.0%
TCAATTGGTGAAAGTTGTGA+TGG + Chr3:2990133-2990152 None:intergenic 35.0%
TCCAAGAATCTACTAATCTG+AGG - Chr3:2988718-2988737 MsG0380011648.01.T01:intron 35.0%
TCTTTCCAGTCATACCTTTA+AGG + Chr3:2994592-2994611 None:intergenic 35.0%
TGAATATGTCAATGGATCCA+AGG + Chr3:2993852-2993871 None:intergenic 35.0%
TGATCAGAATGGATGAATCA+AGG - Chr3:2988941-2988960 MsG0380011648.01.T01:intron 35.0%
TGCCAACTAAAATAAGCTCA+CGG - Chr3:2987473-2987492 MsG0380011648.01.T01:CDS 35.0%
TGGATCCATTAGTAGGAAAA+AGG - Chr3:2992266-2992285 MsG0380011648.01.T01:five_prime_UTR 35.0%
TGGTCACGAATATTATTTCC+AGG + Chr3:2990935-2990954 None:intergenic 35.0%
TTACAAGAGATTCAAGGACA+AGG + Chr3:2987556-2987575 None:intergenic 35.0%
TTAGTAATACAGCTGGAATG+TGG - Chr3:2994156-2994175 MsG0380011648.01.T01:intron 35.0%
TTCTCAGCAAAATACCATTC+TGG + Chr3:2990376-2990395 None:intergenic 35.0%
TTCTTGATCAGTTCTCAAAG+TGG - Chr3:2989148-2989167 MsG0380011648.01.T01:intron 35.0%
TTGTTTAATGTTCCTGCAAG+TGG + Chr3:2990486-2990505 None:intergenic 35.0%
TTTATTGCAAGCAAGACCAA+TGG - Chr3:2988475-2988494 MsG0380011648.01.T01:intron 35.0%
! AAAATTGGACCAGTTGACTT+AGG + Chr3:2994704-2994723 None:intergenic 35.0%
! AAATAGCATCCTAATGGATC+TGG - Chr3:2991390-2991409 MsG0380011648.01.T01:intron 35.0%
! ACTAGAGGAGACTCTTTTAA+TGG + Chr3:2990178-2990197 None:intergenic 35.0%
! AGATTTGGTTCACTCTTTCA+TGG - Chr3:2989124-2989143 MsG0380011648.01.T01:intron 35.0%
! CAGGTTTTCTTAGGTGAAAA+TGG - Chr3:2991245-2991264 MsG0380011648.01.T01:intron 35.0%
! CCTTTTACAAGGTGAATAAG+TGG - Chr3:2987401-2987420 MsG0380011648.01.T01:intron 35.0%
! CGAACTATAGTTGGTTCAAA+TGG - Chr3:2992883-2992902 MsG0380011648.01.T01:intron 35.0%
! CTTGTTGTAGACCATTAGAA+AGG + Chr3:2993816-2993835 None:intergenic 35.0%
! GAGTTACAATTGATGATTGG+TGG - Chr3:2994237-2994256 MsG0380011648.01.T01:intron 35.0%
! GGTTTTCTTAGGTGAAAATG+GGG - Chr3:2991247-2991266 MsG0380011648.01.T01:intron 35.0%
! GTGGAGAAATGAGCAATTTT+GGG - Chr3:2994256-2994275 MsG0380011648.01.T01:intron 35.0%
! GTGGAGTTACAATTGATGAT+TGG - Chr3:2994234-2994253 MsG0380011648.01.T01:intron 35.0%
! GTTTTCTTAGGTGAAAATGG+GGG - Chr3:2991248-2991267 MsG0380011648.01.T01:intron 35.0%
! TTTTGCATGCATGCACTTAT+TGG - Chr3:2988373-2988392 MsG0380011648.01.T01:intron 35.0%
! TTTTGTGCCTTCTTTTTCCT+AGG + Chr3:2992568-2992587 None:intergenic 35.0%
!! CCATTAGGATGCTATTTCAT+AGG + Chr3:2991387-2991406 None:intergenic 35.0%
!! CCTTTTGATTCTCAATTGAC+CGG - Chr3:2987935-2987954 MsG0380011648.01.T01:intron 35.0%
!! CTTTTGATTCTCAATTGACC+GGG - Chr3:2987936-2987955 MsG0380011648.01.T01:intron 35.0%
!! GGTCCAATTTTAGAAGAATG+TGG - Chr3:2994713-2994732 MsG0380011648.01.T01:five_prime_UTR 35.0%
!! TACGGATTGATTTGACTTGA+TGG + Chr3:2988994-2989013 None:intergenic 35.0%
!! TTATGCATGATGATTTGGTG+TGG - Chr3:2986721-2986740 MsG0380011648.01.T01:intron 35.0%
!! TTCATGATGGATCCATTAGT+AGG - Chr3:2992259-2992278 MsG0380011648.01.T01:five_prime_UTR 35.0%
!!! AAAGACGTTTATTTTGGTGG+AGG + Chr3:2989458-2989477 None:intergenic 35.0%
!!! AAGACGTTTATTTTGGTGGA+GGG + Chr3:2989457-2989476 None:intergenic 35.0%
!!! AGTTTTGCTCTGGCTTTAAA+TGG + Chr3:2988775-2988794 None:intergenic 35.0%
!!! GTTTTGCTCTGGCTTTAAAT+GGG + Chr3:2988774-2988793 None:intergenic 35.0%
!!! TGAGCTTATTTTAGTTGGCA+GGG + Chr3:2987473-2987492 None:intergenic 35.0%
!!! TTAGAGCTCCTGCTTTTTTT+TGG + Chr3:2991346-2991365 None:intergenic 35.0%
!!! TTTATGGTTTTGATGCTCCT+AGG - Chr3:2992548-2992567 MsG0380011648.01.T01:intron 35.0%
AAAATCCACACACACAACTC+TGG + Chr3:2988235-2988254 None:intergenic 40.0%
AAAGTGGTTTCCTGTCATGA+GGG - Chr3:2989164-2989183 MsG0380011648.01.T01:intron 40.0%
AAATCCACACACACAACTCT+GGG + Chr3:2988234-2988253 None:intergenic 40.0%
AAGAATTACCTCAGGAGACA+TGG + Chr3:2988083-2988102 None:intergenic 40.0%
AAGCAAAGACAGAACCAACT+TGG - Chr3:2988566-2988585 MsG0380011648.01.T01:CDS 40.0%
AATCAAGGCAACCATTGTCA+AGG - Chr3:2988956-2988975 MsG0380011648.01.T01:intron 40.0%
ACATTCATTGCAAGCCACAA+AGG + Chr3:2986839-2986858 None:intergenic 40.0%
ACCCTTGAGACGCTTAAATT+TGG + Chr3:2986935-2986954 None:intergenic 40.0%
ACTATGTGGAGAAGACATAG+GGG - Chr3:2986795-2986814 MsG0380011648.01.T01:intron 40.0%
AGAATTACCTCAGGAGACAT+GGG + Chr3:2988082-2988101 None:intergenic 40.0%
AGAGGCGGTTTAATTGAAGT+CGG + Chr3:2992114-2992133 None:intergenic 40.0%
AGAGTACAATATGCCACCAA+AGG + Chr3:2993976-2993995 None:intergenic 40.0%
AGCTGAAGTCGAACTATAGT+TGG - Chr3:2992874-2992893 MsG0380011648.01.T01:intron 40.0%
ATCTTGACAGGCTTTCCTTA+AGG - Chr3:2989193-2989212 MsG0380011648.01.T01:intron 40.0%
ATGCAGCTTAGTAATACAGC+TGG - Chr3:2994149-2994168 MsG0380011648.01.T01:intron 40.0%
ATGCATGCACTTATTGGAAC+AGG - Chr3:2988379-2988398 MsG0380011648.01.T01:intron 40.0%
ATGGACATCAATACCTTTGG+TGG - Chr3:2993960-2993979 MsG0380011648.01.T01:five_prime_UTR 40.0%
ATTCATTGCAAGCCACAAAG+GGG + Chr3:2986837-2986856 None:intergenic 40.0%
ATTGGCAACTTCCTTGACAA+TGG + Chr3:2988970-2988989 None:intergenic 40.0%
CAACTATGTGGAGAAGACAT+AGG - Chr3:2986793-2986812 MsG0380011648.01.T01:intron 40.0%
CAAGTATGCTAGAGATGAGA+TGG - Chr3:2994210-2994229 MsG0380011648.01.T01:intron 40.0%
CAAGTGAACAATCACCCAAA+AGG + Chr3:2994561-2994580 None:intergenic 40.0%
CAATGCAAGATGGAATGTTG+TGG - Chr3:2990909-2990928 MsG0380011648.01.T01:intron 40.0%
CATCATTCTTCTCTGTCTTG+TGG - Chr3:2994657-2994676 MsG0380011648.01.T01:intron 40.0%
CATTCATTGCAAGCCACAAA+GGG + Chr3:2986838-2986857 None:intergenic 40.0%
CATTCTGAATCATCTGTTGC+TGG - Chr3:2992709-2992728 MsG0380011648.01.T01:intron 40.0%
CCAACTAAAATAAGCTCACG+GGG - Chr3:2987475-2987494 MsG0380011648.01.T01:CDS 40.0%
CCCTCAGATTAGTAGATTCT+TGG + Chr3:2988722-2988741 None:intergenic 40.0%
CCGGTCAATTGAGAATCAAA+AGG + Chr3:2987938-2987957 None:intergenic 40.0%
CTAAGAAGGTTCCAGAAGAA+GGG - Chr3:2990882-2990901 MsG0380011648.01.T01:intron 40.0%
CTAGAAACATACACCAAACG+TGG + Chr3:2991299-2991318 None:intergenic 40.0%
CTATGAGTATGAAAGAAGGG+AGG - Chr3:2986882-2986901 MsG0380011648.01.T01:CDS 40.0%
CTCCTACCATTGTTCTTGTT+TGG - Chr3:2994621-2994640 MsG0380011648.01.T01:intron 40.0%
GAAAACAGAATGGGGAAAAG+AGG - Chr3:2993402-2993421 MsG0380011648.01.T01:intron 40.0%
GAAAGAGAGAAGAGCAATGA+AGG - Chr3:2990435-2990454 MsG0380011648.01.T01:CDS 40.0%
GAACGGTTTCGTGCAATATA+AGG + Chr3:2991552-2991571 None:intergenic 40.0%
GAATCATGGGGACCATTATT+TGG - Chr3:2994521-2994540 MsG0380011648.01.T01:intron 40.0%
GACCAAACAAGAACAATGGT+AGG + Chr3:2994626-2994645 None:intergenic 40.0%
GACCTACATATGTTGGAACA+GGG - Chr3:2992503-2992522 MsG0380011648.01.T01:intron 40.0%
GCATCTACTCAATTGGTTGA+TGG - Chr3:2993304-2993323 MsG0380011648.01.T01:intron 40.0%
GCCAACTAAAATAAGCTCAC+GGG - Chr3:2987474-2987493 MsG0380011648.01.T01:CDS 40.0%
GCCACAACTAATGACATGTA+TGG + Chr3:2993374-2993393 None:intergenic 40.0%
GCCATACATGTCATTAGTTG+TGG - Chr3:2993370-2993389 MsG0380011648.01.T01:intron 40.0%
GGTCAAACATGTCAACTATG+TGG - Chr3:2986781-2986800 MsG0380011648.01.T01:intron 40.0%
GTACGTACCACATAAAGTAG+TGG - Chr3:2987672-2987691 MsG0380011648.01.T01:intron 40.0%
TAACCTGTATCATTCCTGGA+TGG + Chr3:2990955-2990974 None:intergenic 40.0%
TAAGGAAAGCCTGTCAAGAT+AGG + Chr3:2989193-2989212 None:intergenic 40.0%
TAGAGTTGAAGGAGATGAAG+AGG - Chr3:2987985-2988004 MsG0380011648.01.T01:intron 40.0%
TCACTAACCTGTATCATTCC+TGG + Chr3:2990959-2990978 None:intergenic 40.0%
TCCATGGACATCAATACCTT+TGG - Chr3:2993957-2993976 MsG0380011648.01.T01:five_prime_UTR 40.0%
TCTAGTTGCAAAGGCTAAGA+AGG - Chr3:2990868-2990887 MsG0380011648.01.T01:intron 40.0%
TGAAGACTTGGATAAGAGTG+TGG - Chr3:2988628-2988647 MsG0380011648.01.T01:CDS 40.0%
TGATGCTCCTAGGAAAAAGA+AGG - Chr3:2992558-2992577 MsG0380011648.01.T01:intron 40.0%
TGCATGCACTTATTGGAACA+GGG - Chr3:2988380-2988399 MsG0380011648.01.T01:intron 40.0%
TGCTTTGTGGCATCACAATT+TGG + Chr3:2991664-2991683 None:intergenic 40.0%
TGGAAATGAATTGCCACGTT+TGG - Chr3:2991283-2991302 MsG0380011648.01.T01:intron 40.0%
TGTTAAGAGAAGGTCCACTA+GGG + Chr3:2991049-2991068 None:intergenic 40.0%
TTAATGTTCCTGCAAGTGGA+CGG + Chr3:2990482-2990501 None:intergenic 40.0%
TTGTTAAGAGAAGGTCCACT+AGG + Chr3:2991050-2991069 None:intergenic 40.0%
! AACATGACACCTTTTCAGCA+GGG + Chr3:2990240-2990259 None:intergenic 40.0%
! CCAGTCATACCTTTAAGGAA+TGG + Chr3:2994587-2994606 None:intergenic 40.0%
! CCAGTTGACTTAGGCAAAAA+TGG + Chr3:2994695-2994714 None:intergenic 40.0%
! CCATTCCTTAAAGGTATGAC+TGG - Chr3:2994584-2994603 MsG0380011648.01.T01:intron 40.0%
! GATGATCGGCGATTTTTGAT+CGG - Chr3:2992039-2992058 MsG0380011648.01.T01:intron 40.0%
! GGTCTATTCAAAGTGCTAAC+AGG - Chr3:2994320-2994339 MsG0380011648.01.T01:intron 40.0%
! GGTGGAGAAATGAGCAATTT+TGG - Chr3:2994255-2994274 MsG0380011648.01.T01:intron 40.0%
! GTTCAACACAAAAGGTGCAT+TGG + Chr3:2992185-2992204 None:intergenic 40.0%
! TAACATGACACCTTTTCAGC+AGG + Chr3:2990241-2990260 None:intergenic 40.0%
! TGTTGTGGATTGTGTTGCAT+GGG - Chr3:2992619-2992638 MsG0380011648.01.T01:intron 40.0%
! TTGTTGTGGATTGTGTTGCA+TGG - Chr3:2992618-2992637 MsG0380011648.01.T01:intron 40.0%
! TTTTGCACTGAGGACAAACT+TGG + Chr3:2986912-2986931 None:intergenic 40.0%
!! AAATACCATTCTGGAGCTCT+AGG + Chr3:2990367-2990386 None:intergenic 40.0%
!! ACCAAAGGTATTGATGTCCA+TGG + Chr3:2993961-2993980 None:intergenic 40.0%
!! CCATTTTTGCCTAAGTCAAC+TGG - Chr3:2994692-2994711 MsG0380011648.01.T01:five_prime_UTR 40.0%
!! GAGCAATTTTGGGTAATTGG+AGG - Chr3:2994266-2994285 MsG0380011648.01.T01:intron 40.0%
!! GGTTAAATGTGTCGAGTTGA+TGG - Chr3:2990639-2990658 MsG0380011648.01.T01:five_prime_UTR 40.0%
!! TTGTTTTTCGTCGTTCAGGT+TGG - Chr3:2993670-2993689 MsG0380011648.01.T01:intron 40.0%
!!! ACCAATTTTGGGTTAGTTGC+AGG - Chr3:2986104-2986123 MsG0380011648.01.T01:CDS 40.0%
!!! GTGAGCTTATTTTAGTTGGC+AGG + Chr3:2987474-2987493 None:intergenic 40.0%
AACTATATATGTGTGGGCGC+AGG + Chr3:2986689-2986708 None:intergenic 45.0%
AAGACCAATGGATCCTTCCA+AGG - Chr3:2988487-2988506 MsG0380011648.01.T01:CDS 45.0%
AATCCACACACACAACTCTG+GGG + Chr3:2988233-2988252 None:intergenic 45.0%
AATCTATTAGGATGCGCGAG+CGG + Chr3:2992007-2992026 None:intergenic 45.0%
ACCAGTGAAACCCGTAATCT+AGG + Chr3:2992979-2992998 None:intergenic 45.0%
ACCTAGATTACGGGTTTCAC+TGG - Chr3:2992975-2992994 MsG0380011648.01.T01:intron 45.0%
AGATAGGTTTCCCTCATGAC+AGG + Chr3:2989177-2989196 None:intergenic 45.0%
AGCCAGAGCAAAACTCTGTA+TGG - Chr3:2988780-2988799 MsG0380011648.01.T01:intron 45.0%
AGTTGAAGGAGATGAAGAGG+AGG - Chr3:2987988-2988007 MsG0380011648.01.T01:intron 45.0%
ATGCTAGAGATGAGATGGAG+TGG - Chr3:2994215-2994234 MsG0380011648.01.T01:intron 45.0%
CAAAGTGGTTTCCTGTCATG+AGG - Chr3:2989163-2989182 MsG0380011648.01.T01:intron 45.0%
CAAGTATTTCAATGGGCCCT+TGG - Chr3:2993832-2993851 MsG0380011648.01.T01:intron 45.0%
CACCCTGTTCCAACATATGT+AGG + Chr3:2992508-2992527 None:intergenic 45.0%
CACTACAATTTCGGCGAGAA+CGG + Chr3:2991569-2991588 None:intergenic 45.0%
CATGTTGAGGGTGATGTTGT+TGG + Chr3:2991764-2991783 None:intergenic 45.0%
GACATAGGGGTTAATGCAGA+TGG - Chr3:2986808-2986827 MsG0380011648.01.T01:intron 45.0%
GAGAGGATTGAGAGAATAGC+CGG + Chr3:2991427-2991446 None:intergenic 45.0%
GATGGTGAGACACTAAAGCA+TGG - Chr3:2993322-2993341 MsG0380011648.01.T01:intron 45.0%
GATTGTGTTGCATGGGAAAG+AGG - Chr3:2992626-2992645 MsG0380011648.01.T01:intron 45.0%
GCCTGCAACTAACCCAAAAT+TGG + Chr3:2986108-2986127 None:intergenic 45.0%
GCGGTTTAATTGAAGTCGGA+CGG + Chr3:2992110-2992129 None:intergenic 45.0%
GCTAAGAAGGTTCCAGAAGA+AGG - Chr3:2990881-2990900 MsG0380011648.01.T01:intron 45.0%
GGAAGGATAGGATGGAGATA+TGG - Chr3:2988543-2988562 MsG0380011648.01.T01:CDS 45.0%
GGACCTACATATGTTGGAAC+AGG - Chr3:2992502-2992521 MsG0380011648.01.T01:intron 45.0%
GGTTTCACTGGTACGATCTT+TGG - Chr3:2992987-2993006 MsG0380011648.01.T01:intron 45.0%
GTGAGACACTAAAGCATGGT+GGG - Chr3:2993326-2993345 MsG0380011648.01.T01:intron 45.0%
TCGAAAAGGCTTCATACCTC+AGG + Chr3:2994036-2994055 None:intergenic 45.0%
TGAAAATGGGGGATGTGACA+TGG - Chr3:2991259-2991278 MsG0380011648.01.T01:intron 45.0%
TGACCATCCAGGAATGATAC+AGG - Chr3:2990949-2990968 MsG0380011648.01.T01:intron 45.0%
TGAGAGGATCCAGATCCATT+AGG + Chr3:2991402-2991421 None:intergenic 45.0%
TGAGGGAAACCTATCTTGAC+AGG - Chr3:2989181-2989200 MsG0380011648.01.T01:intron 45.0%
TGGACCCTAATACTTCAGTC+TGG + Chr3:2989991-2990010 None:intergenic 45.0%
TTCAAAACTCATGCCACACC+CGG + Chr3:2987957-2987976 None:intergenic 45.0%
TTCCATAGCCATAAGCAGCT+AGG + Chr3:2988514-2988533 None:intergenic 45.0%
TTGAACCTAGAGCTCCAGAA+TGG - Chr3:2990359-2990378 MsG0380011648.01.T01:intron 45.0%
! CTATAGAGATGGTAGTGCAG+AGG + Chr3:2991166-2991185 None:intergenic 45.0%
! GTCCATACAGAGTTTTGCTC+TGG + Chr3:2988785-2988804 None:intergenic 45.0%
! TGGCTCAAGTGTTGTTGTTG+TGG - Chr3:2992604-2992623 MsG0380011648.01.T01:intron 45.0%
! TGTTGCTTGGAAGGATAGGA+TGG - Chr3:2988535-2988554 MsG0380011648.01.T01:CDS 45.0%
!! ACTGTGTTTGCTGTCACTAG+AGG + Chr3:2990193-2990212 None:intergenic 45.0%
!! ATGGCTATGGAAGTGTTGCT+TGG - Chr3:2988522-2988541 MsG0380011648.01.T01:CDS 45.0%
!! CTATGGAAGTGTTGCTTGGA+AGG - Chr3:2988526-2988545 MsG0380011648.01.T01:CDS 45.0%
!! GAAGCCTTTTCGAGCGTTTT+TGG - Chr3:2994043-2994062 MsG0380011648.01.T01:five_prime_UTR 45.0%
!! GAAGTGTTGCTTGGAAGGAT+AGG - Chr3:2988531-2988550 MsG0380011648.01.T01:CDS 45.0%
!! GTTCAGGTTGGATGGATCTA+TGG - Chr3:2993682-2993701 MsG0380011648.01.T01:intron 45.0%
!! TCTGTTGCTGGGAGTACTAA+AGG - Chr3:2992721-2992740 MsG0380011648.01.T01:intron 45.0%
!!! CCCCGTGAGCTTATTTTAGT+TGG + Chr3:2987478-2987497 None:intergenic 45.0%
!!! GGTGTGGCATGAGTTTTGAA+GGG - Chr3:2987957-2987976 MsG0380011648.01.T01:intron 45.0%
!!! TTTTCGTCGTTCAGGTTGGA+TGG - Chr3:2993674-2993693 MsG0380011648.01.T01:intron 45.0%
!! AATAAATTATTTAAAAGATA+AGG - Chr3:2990396-2990415 MsG0380011648.01.T01:CDS 5.0%
!!! AAAAACTTTAATAATTTTTT+TGG - Chr3:2992399-2992418 MsG0380011648.01.T01:five_prime_UTR 5.0%
!!! TTTTTTTTTTTAAAAAAACT+CGG - Chr3:2988688-2988707 MsG0380011648.01.T01:intron 5.0%
AAGGGCTGAAGTTCGAATCC+TGG + Chr3:2987432-2987451 None:intergenic 50.0%
AATGAGTCCATTCGAGTCCG+TGG + Chr3:2989333-2989352 None:intergenic 50.0%
AATGGGGGATGTGACATGGA+TGG - Chr3:2991263-2991282 MsG0380011648.01.T01:intron 50.0%
ACGGCCAAAAACGCTCGAAA+AGG + Chr3:2994050-2994069 None:intergenic 50.0%
AGAAGGTTCCAGAAGAAGGG+TGG - Chr3:2990885-2990904 MsG0380011648.01.T01:intron 50.0%
AGGTCCTTGGAAGGATCCAT+TGG + Chr3:2988494-2988513 None:intergenic 50.0%
AGTGATCAAGTTCGATCCCC+TGG + Chr3:2988827-2988846 None:intergenic 50.0%
ATGGACTTGCCCACCGAAAT+TGG - Chr3:2988799-2988818 MsG0380011648.01.T01:intron 50.0%
CAAGATGGAATGTTGTGGCC+TGG - Chr3:2990914-2990933 MsG0380011648.01.T01:intron 50.0%
CAATCTTACCGTCCACTTGC+AGG - Chr3:2990471-2990490 MsG0380011648.01.T01:CDS 50.0%
CCAGTAAGCAAGCAAACAGC+AGG + Chr3:2994000-2994019 None:intergenic 50.0%
CGGCCCTTGGATTGATCTAA+TGG + Chr3:2991937-2991956 None:intergenic 50.0%
GAAGGGTGGACAATGCAAGA+TGG - Chr3:2990899-2990918 MsG0380011648.01.T01:intron 50.0%
GACCTAGCTGCTTATGGCTA+TGG - Chr3:2988509-2988528 MsG0380011648.01.T01:CDS 50.0%
GAGAGAATAGCCGGATTGAG+AGG + Chr3:2991418-2991437 None:intergenic 50.0%
GATTCTCAATTGACCGGGTG+TGG - Chr3:2987941-2987960 MsG0380011648.01.T01:intron 50.0%
GCAAATTCCCATGTCTCCTG+AGG - Chr3:2988072-2988091 MsG0380011648.01.T01:intron 50.0%
GCACTTATTGGAACAGGGTG+AGG - Chr3:2988385-2988404 MsG0380011648.01.T01:intron 50.0%
GGATCTGGATCCTCTCAATC+CGG - Chr3:2991405-2991424 MsG0380011648.01.T01:intron 50.0%
GGTGAGACACTAAAGCATGG+TGG - Chr3:2993325-2993344 MsG0380011648.01.T01:intron 50.0%
TAACCCCAGAGTTGTGTGTG+TGG - Chr3:2988227-2988246 MsG0380011648.01.T01:CDS 50.0%
TAAGCAGCTAGGTCCTTGGA+AGG + Chr3:2988503-2988522 None:intergenic 50.0%
TATGAGTCCACGGACTCGAA+TGG - Chr3:2989323-2989342 MsG0380011648.01.T01:intron 50.0%
TCCAAGGACCTAGCTGCTTA+TGG - Chr3:2988503-2988522 MsG0380011648.01.T01:CDS 50.0%
TGCATTGTCCACCCTTCTTC+TGG + Chr3:2990896-2990915 None:intergenic 50.0%
! ATTGAAGGAGAGAGCACAGC+AGG - Chr3:2991974-2991993 MsG0380011648.01.T01:intron 50.0%
! CCTGCTGTTTGCTTGCTTAC+TGG - Chr3:2993997-2994016 MsG0380011648.01.T01:five_prime_UTR 50.0%
! GAAGGGTGTGCTAGAGTTGA+AGG - Chr3:2987974-2987993 MsG0380011648.01.T01:intron 50.0%
! TGGTGGAGAGTATGAGTCCA+CGG - Chr3:2989313-2989332 MsG0380011648.01.T01:intron 50.0%
!! AGCAGGAGCTCTAAATGCAC+TGG - Chr3:2991352-2991371 MsG0380011648.01.T01:intron 50.0%
!! GGGTGTGGCATGAGTTTTGA+AGG - Chr3:2987956-2987975 MsG0380011648.01.T01:intron 50.0%
GCCATAAGCAGCTAGGTCCT+TGG + Chr3:2988507-2988526 None:intergenic 55.0%
TCAATCCCACCGTCCACTTG+CGG - Chr3:2988744-2988763 MsG0380011648.01.T01:intron 55.0%
TGCAGATGGTGACCCCTTTG+TGG - Chr3:2986822-2986841 MsG0380011648.01.T01:CDS 55.0%
! CGATCCCCTGGTGCCAATTT+CGG + Chr3:2988815-2988834 None:intergenic 55.0%
! GGTGAATAAGTGGGGTGTCC+AGG - Chr3:2987411-2987430 MsG0380011648.01.T01:intron 55.0%
AATCCCACCGTCCACTTGCG+GGG - Chr3:2988746-2988765 MsG0380011648.01.T01:intron 60.0%
CAATCCCACCGTCCACTTGC+GGG - Chr3:2988745-2988764 MsG0380011648.01.T01:intron 60.0%
CCAAGGGCCGTGAATAGTGC+AGG - Chr3:2991947-2991966 MsG0380011648.01.T01:intron 60.0%
CCCACCGAAATTGGCACCAG+GGG - Chr3:2988808-2988827 MsG0380011648.01.T01:intron 60.0%
CCTGCACTATTCACGGCCCT+TGG + Chr3:2991950-2991969 None:intergenic 60.0%
GCCCACCGAAATTGGCACCA+GGG - Chr3:2988807-2988826 MsG0380011648.01.T01:intron 60.0%
TGCCCACCGAAATTGGCACC+AGG - Chr3:2988806-2988825 MsG0380011648.01.T01:intron 60.0%
TTAAATGGGCCCCCCGCAAG+TGG + Chr3:2988760-2988779 None:intergenic 60.0%
! AGGAGAGAGCACAGCAGGAG+AGG - Chr3:2991979-2991998 MsG0380011648.01.T01:intron 60.0%
! CCCCTGGTGCCAATTTCGGT+GGG + Chr3:2988811-2988830 None:intergenic 60.0%
! TCCCCTGGTGCCAATTTCGG+TGG + Chr3:2988812-2988831 None:intergenic 60.0%
ATCCCACCGTCCACTTGCGG+GGG - Chr3:2988747-2988766 MsG0380011648.01.T01:intron 65.0%
ATGGGCCCCCCGCAAGTGGA+CGG + Chr3:2988756-2988775 None:intergenic 70.0%
TCCCACCGTCCACTTGCGGG+GGG - Chr3:2988748-2988767 MsG0380011648.01.T01:intron 70.0%
GCCCCCCGCAAGTGGACGGT+GGG + Chr3:2988752-2988771 None:intergenic 75.0%
! GGCCCCCCGCAAGTGGACGG+TGG + Chr3:2988753-2988772 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 2986098 2994751 2986098 ID=MsG0380011648.01;Name=MsG0380011648.01
Chr3 mRNA 2986098 2994751 2986098 ID=MsG0380011648.01.T01;Parent=MsG0380011648.01;Name=MsG0380011648.01.T01;_AED=0.16;_eAED=0.45;_QI=1122|0|0|1|1|1|13|0|689
Chr3 exon 2994671 2994751 2994671 ID=MsG0380011648.01.T01:exon:1685;Parent=MsG0380011648.01.T01
Chr3 exon 2993897 2994092 2993897 ID=MsG0380011648.01.T01:exon:1684;Parent=MsG0380011648.01.T01
Chr3 exon 2992756 2992871 2992756 ID=MsG0380011648.01.T01:exon:1683;Parent=MsG0380011648.01.T01
Chr3 exon 2992177 2992448 2992177 ID=MsG0380011648.01.T01:exon:1682;Parent=MsG0380011648.01.T01
Chr3 exon 2991617 2991901 2991617 ID=MsG0380011648.01.T01:exon:1681;Parent=MsG0380011648.01.T01
Chr3 exon 2990393 2990738 2990393 ID=MsG0380011648.01.T01:exon:1680;Parent=MsG0380011648.01.T01
Chr3 exon 2989879 2990016 2989879 ID=MsG0380011648.01.T01:exon:1679;Parent=MsG0380011648.01.T01
Chr3 exon 2989476 2989601 2989476 ID=MsG0380011648.01.T01:exon:1678;Parent=MsG0380011648.01.T01
Chr3 exon 2988477 2988689 2988477 ID=MsG0380011648.01.T01:exon:1677;Parent=MsG0380011648.01.T01
Chr3 exon 2988107 2988377 2988107 ID=MsG0380011648.01.T01:exon:1676;Parent=MsG0380011648.01.T01
Chr3 exon 2987426 2987625 2987426 ID=MsG0380011648.01.T01:exon:1675;Parent=MsG0380011648.01.T01
Chr3 exon 2986811 2987161 2986811 ID=MsG0380011648.01.T01:exon:1674;Parent=MsG0380011648.01.T01
Chr3 exon 2986098 2986694 2986098 ID=MsG0380011648.01.T01:exon:1673;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2994671 2994751 2994671 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2993897 2994092 2993897 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2992756 2992871 2992756 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2992177 2992448 2992177 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2991617 2991901 2991617 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 five_prime_UTR 2990567 2990738 2990567 ID=MsG0380011648.01.T01:five_prime_utr;Parent=MsG0380011648.01.T01
Chr3 CDS 2990393 2990566 2990393 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2989879 2990016 2989879 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2989476 2989601 2989476 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2988477 2988689 2988477 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2988107 2988377 2988107 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2987426 2987625 2987426 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2986811 2987161 2986811 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Chr3 CDS 2986098 2986694 2986098 ID=MsG0380011648.01.T01:cds;Parent=MsG0380011648.01.T01
Gene Sequence

>MsG0380011648.01.T01

ATGTTAACATTTGAGGCTTTATCTGAAACTTCTGAATTTGCAAGGAAATGGGTTCCTTTTTGTAAGAAGTTCAACATTGAACCTAGAGCTCCAGAATGGTATTTTGCTGAGAAAATAAATTATTTAAAAGATAAGGTTCATTCATCATTTGTGAAAGAGAGAAGAGCAATGAAGAGAGAATATGAAGAATTTAAAGTTAGAATTAATTCTCTAGTTGCAAAGGCTAAGAAGGTTCCAGAAGAAGGGTGGACAATGCAAGATGGAATGTTGTGGCCTGGAAATAATATTCGTGACCATCCAGGAATGATACAGGTTTTCTTAGGTGAAAATGGGGGATGTGACATGGATGGAAATGAATTGCCACGTTTGGTGTATGTTTCTAGAGAAAAGAGGCCTAACTTCAATCACCAAAAAAAAGCAGGAGCTCTAAATGCACTGGTTAGAGTGTCTTCTGTACTTTCCAATGCACCTTTTGTGTTGAACTTAGACTATAATCATTACATCAACAATAGCAAGGCTATTAGAGAAGCAATGTGTTTCATGATGGATCCATTAGTAGGAAAAAGGATTTGCTATGTTCAATTCTCACAAAGATTTGATGGGATTGACACTCATGATCAATATGCCAATCAAACAAATACATTTGTTGATATAAACATGAAAGGTTTGGATGGTATTCAAGGACCTACATATGTTGGAACAGGGTGTGTATTTAGAAGACAAGCACTTTATGGTTTTGATGCTCCTAGGAAAAAGAAGGCACAAAACAAGACATGTAATTGTTGGCTCAAGTGTTGTTGTTGTGGATTGTGTTGCATGGGAAAGAGGAAGAAGAAAAAGATGAAGAAGTCTAAGTTTGAGTTAATGGATATTAGTCATAGAAAAGTGCATTCTGAATCATCTGTTGCTGGGAGTACTAAAGGAAATGAAGATGAAGATGGCTTGTCTCTAATCTCAAGTCAAAAGTTAGTTAAGAAATTTGGAGAATCTCCTATTTTCATTGCATCTACTCAATTGGTTGATGGTGAGACACTAAAGCATGGTGGGATTGCTTCTCAACTGACAGAAGCCATACATGTCATTAGTTGTGGCTATGAAGAGAAAACAGAATGGGGAAAAGAGGTTGGATGGATCTATGGTTCAGTTACAGAAGATATATTAACAGGTTTCAAAATGCATTGTCATGGATGGAGATCTATATATTGTATTCCTGGAAGAACTGCATTTAAAATATCTTCATCAAATAACCTTTCTAATGGTCTACAACAAGTATTTCAATGGGCCCTTGGATCCATTGACATATTCATGAGTAAACATTGTCCTATTTGGTATGGATATAAAGGAGGATTAAAGTGGTTAGAAAGGATTTCTTACATAAATGCTATTGTATATCCATGGACATCAATACCTTTGGTGGCATATTGTACTCTTCCTGCTGTTTGCTTGCTTACTGGAAAATTTATCATTCCTGAGCTTAGTAATACAGCTGGAATGTGGTTTATTTCTCTTTTCATTTGCATTTTCACAACAAGTATGCTAGAGATGAGATGGAGTGGAGTTACAATTGATGATTGGTGGAGAAATGAGCAATTTTGGGTAATTGGAGGTGTTTCAGCAAATTTATATGCTGTATTTGTAGGTCTATTCAAAGTGCTAACAGGTGTAAATAGCAACTTCATTGTAACATCAAAATCAACAAAAGATGATGAAGACAAGGAACATAATGAGATAATGTTTGGTTTGAAGTGGACAACATTATTAATCATACCAACAACATTGCTTATATTAAACATAATTGCTATGGTTGCTGGATTGTCACATGCAATTAACAATGGTTTTGAATCATGGGGACCATTATTTGGGAAACTAATGTTTTCCTTTTGGGTGATTGTTCACTTGTTTCCATTCCTTAAAGGTATGACTGGAAAGAATAATAGGACTCCTACCATTGTTCTTGTTTGGTCAATCTTGCTTGCATCATTCTTCTCTGTCTTGTGGGTGAAAATTGATCCATTTTTGCCTAAGTCAACTGGTCCAATTTTAGAAGAATGTGGATTGGATTGTAACTAA

Protein sequence

>MsG0380011648.01.T01

MLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAEKINYLKDKVHSSFVKERRAMKREYEEFKVRINSLVAKAKKVPEEGWTMQDGMLWPGNNIRDHPGMIQVFLGENGGCDMDGNELPRLVYVSREKRPNFNHQKKAGALNALVRVSSVLSNAPFVLNLDYNHYINNSKAIREAMCFMMDPLVGKRICYVQFSQRFDGIDTHDQYANQTNTFVDINMKGLDGIQGPTYVGTGCVFRRQALYGFDAPRKKKAQNKTCNCWLKCCCCGLCCMGKRKKKKMKKSKFELMDISHRKVHSESSVAGSTKGNEDEDGLSLISSQKLVKKFGESPIFIASTQLVDGETLKHGGIASQLTEAIHVISCGYEEKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIYCIPGRTAFKISSSNNLSNGLQQVFQWALGSIDIFMSKHCPIWYGYKGGLKWLERISYINAIVYPWTSIPLVAYCTLPAVCLLTGKFIIPELSNTAGMWFISLFICIFTTSMLEMRWSGVTIDDWWRNEQFWVIGGVSANLYAVFVGLFKVLTGVNSNFIVTSKSTKDDEDKEHNEIMFGLKWTTLLIIPTTLLILNIIAMVAGLSHAINNGFESWGPLFGKLMFSFWVIVHLFPFLKGMTGKNNRTPTIVLVWSILLASFFSVLWVKIDPFLPKSTGPILEECGLDCN*