AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018861.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018861.01.T01 MTR_4g019340 82.456 513 40 4 11 519 37 503 0.0 818
MsG0480018861.01.T01 MTR_4g017830 71.708 562 123 6 1 558 1 530 0.0 778
MsG0480018861.01.T01 MTR_4g017440 65.341 528 142 8 4 525 6 498 0.0 640
MsG0480018861.01.T01 MTR_4g017410 63.569 538 135 10 1 530 1 485 0.0 623
MsG0480018861.01.T01 MTR_4g017470 58.867 547 148 7 1 538 1 479 0.0 574
MsG0480018861.01.T01 MTR_4g017550 63.454 498 133 12 39 529 18 473 0.0 570
MsG0480018861.01.T01 MTR_4g017610 57.714 525 169 10 2 525 3 475 0.0 551
MsG0480018861.01.T01 MTR_4g019310 40.775 542 248 16 1 525 1 486 1.37e-112 344
MsG0480018861.01.T01 MTR_7g066340 33.217 572 271 16 1 558 1 475 7.39e-81 261
MsG0480018861.01.T01 MTR_7g066260 33.798 574 270 18 5 558 8 491 3.97e-79 257
MsG0480018861.01.T01 MTR_7g066410 34.317 542 295 16 13 531 11 514 1.90e-76 251
MsG0480018861.01.T01 MTR_7g066570 34.552 547 261 15 5 528 7 479 6.04e-76 251
MsG0480018861.01.T01 MTR_7g066570 28.807 243 137 8 301 534 17 232 7.98e-13 71.6
MsG0480018861.01.T01 MTR_7g066350 32.911 553 245 14 8 533 5 458 7.87e-75 245
MsG0480018861.01.T01 MTR_7g058710 31.685 546 287 12 1 529 1 477 9.69e-75 246
MsG0480018861.01.T01 MTR_7g066400 33.519 540 251 14 1 532 1 440 7.29e-73 239
MsG0480018861.01.T01 MTR_1g041315 33.270 529 259 18 1 513 1 451 6.68e-71 236
MsG0480018861.01.T01 MTR_7g066430 34.216 529 286 12 13 528 5 484 2.64e-68 229
MsG0480018861.01.T01 MTR_7g012680 33.638 547 241 17 1 528 1 444 8.42e-68 226
MsG0480018861.01.T01 MTR_7g066360 33.100 571 274 18 2 559 4 479 1.04e-63 216
MsG0480018861.01.T01 MTR_7g062280 32.149 563 282 19 1 535 1 491 2.58e-59 205
MsG0480018861.01.T01 MTR_7g063660 31.402 535 288 15 13 535 10 477 9.39e-59 203
MsG0480018861.01.T01 MTR_7g063900 32.532 541 294 16 1 529 1 482 2.40e-58 202
MsG0480018861.01.T01 MTR_7g063880 31.618 544 279 20 1 531 1 464 7.58e-58 200
MsG0480018861.01.T01 MTR_7g066580 30.667 525 263 13 18 527 1 439 1.26e-57 199
MsG0480018861.01.T01 MTR_7g062300 30.203 543 293 15 1 528 1 472 1.09e-55 195
MsG0480018861.01.T01 MTR_7g063840 30.185 540 295 15 7 535 5 473 5.54e-55 193
MsG0480018861.01.T01 MTR_7g066290 34.321 405 199 12 3 389 6 361 1.71e-53 188
MsG0480018861.01.T01 MTR_4g019240 77.419 124 23 4 1 122 1 121 2.67e-52 177
MsG0480018861.01.T01 MTR_4g019240 85.915 71 10 0 487 557 112 182 7.31e-29 113
MsG0480018861.01.T01 MTR_7g063920 28.942 539 276 16 1 535 1 436 2.14e-48 174
MsG0480018861.01.T01 MTR_7g063820 31.330 549 298 18 1 535 1 484 3.07e-48 175
MsG0480018861.01.T01 MTR_7g063890 30.270 555 278 19 6 529 22 498 5.76e-47 172
MsG0480018861.01.T01 MTR_7g063830 28.933 553 268 16 1 536 1 445 1.09e-45 167
MsG0480018861.01.T01 MTR_7g058700 32.979 376 166 15 24 381 531 838 4.16e-43 165
MsG0480018861.01.T01 MTR_7g063670 29.050 537 276 18 6 531 11 453 6.15e-42 157
MsG0480018861.01.T01 MTR_3g065200 27.221 529 266 15 13 534 4 420 9.35e-41 154
MsG0480018861.01.T01 MTR_2g029400 27.413 518 244 15 8 517 10 403 6.34e-37 142
MsG0480018861.01.T01 MTR_7g066480 33.596 381 188 14 13 380 17 345 2.72e-36 140
MsG0480018861.01.T01 MTR_7g066480 35.185 108 59 1 438 534 319 426 1.29e-11 67.4
MsG0480018861.01.T01 MTR_3g007740 27.941 544 275 17 1 529 1 442 5.78e-36 140
MsG0480018861.01.T01 MTR_7g066280 26.195 481 265 13 99 558 1 412 9.09e-36 139
MsG0480018861.01.T01 MTR_7g066310 34.091 264 120 5 298 558 193 405 3.63e-34 134
MsG0480018861.01.T01 MTR_7g066310 41.176 153 74 6 13 158 8 151 8.12e-24 104
MsG0480018861.01.T01 MTR_7g066490 31.481 378 186 12 13 380 17 331 7.76e-32 127
MsG0480018861.01.T01 MTR_7g066490 47.887 71 37 0 459 529 337 407 8.21e-11 64.7
MsG0480018861.01.T01 MTR_7g066680 31.429 315 158 8 251 525 38 334 9.76e-28 114
MsG0480018861.01.T01 MTR_7g063720 32.780 241 128 5 294 531 19 228 4.16e-25 104
MsG0480018861.01.T01 MTR_1g014060 32.895 228 119 8 21 238 9 212 9.99e-24 103
MsG0480018861.01.T01 MTR_1g014060 36.585 205 97 5 328 529 210 384 3.91e-22 99.0
MsG0480018861.01.T01 MTR_8g445860 30.400 250 120 6 298 523 13 232 3.34e-23 99.0
MsG0480018861.01.T01 MTR_8g445860 29.646 226 137 6 10 230 11 219 1.52e-17 82.8
MsG0480018861.01.T01 MTR_4g019350 52.525 99 36 2 356 453 1 89 2.83e-22 91.7
MsG0480018861.01.T01 MTR_7g100420 34.007 297 161 10 240 525 121 393 3.41e-22 99.4
MsG0480018861.01.T01 MTR_0150s0010 33.475 236 134 8 298 523 10 232 5.02e-21 92.8
MsG0480018861.01.T01 MTR_0150s0010 27.232 224 142 4 13 230 11 219 6.75e-15 75.1
MsG0480018861.01.T01 MTR_1g115440 33.054 239 131 9 298 523 11 233 6.21e-21 92.4
MsG0480018861.01.T01 MTR_1g115440 29.289 239 141 8 1 230 1 220 1.51e-18 85.5
MsG0480018861.01.T01 MTR_7g062270 41.045 134 68 3 1 134 1 123 2.31e-19 90.9
MsG0480018861.01.T01 MTR_7g063850 28.279 244 152 6 296 535 64 288 3.05e-19 89.0
MsG0480018861.01.T01 MTR_8g023240 22.711 546 309 20 6 527 31 487 9.15e-18 87.0
MsG0480018861.01.T01 MTR_7g066390 41.379 116 60 3 443 558 41 148 3.33e-14 70.9
MsG0480018861.01.T01 MTR_1g115450 44.304 79 42 1 298 374 7 85 5.84e-14 69.7
MsG0480018861.01.T01 MTR_1g115450 33.333 117 65 1 10 126 5 108 1.31e-11 62.8
MsG0480018861.01.T01 MTR_0150s0030 36.275 102 56 2 298 396 8 103 8.08e-14 71.2
MsG0480018861.01.T01 MTR_8g445910 37.255 102 55 2 298 396 8 103 1.18e-13 71.6
MsG0480018861.01.T01 MTR_8g044880 37.255 102 55 2 298 396 8 103 7.77e-13 69.7
MsG0480018861.01.T01 MTR_1g115455 40.506 79 45 1 298 374 9 87 3.59e-12 66.6
MsG0480018861.01.T01 MTR_1g115455 31.967 122 66 2 13 130 10 118 5.22e-12 66.2
MsG0480018861.01.T01 MTR_6g006800 61.702 47 17 1 1 47 1 46 1.21e-11 60.8
MsG0480018861.01.T01 MTR_8g445920 43.548 62 35 0 298 359 10 71 2.85e-11 60.8
MsG0480018861.01.T01 MTR_8g044890 43.548 62 35 0 298 359 10 71 2.85e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018861.01.T01 AT5G01120 31.107 569 306 20 9 558 6 507 2.26e-60 208
MsG0480018861.01.T01 AT3G09140 31.664 559 293 16 9 525 6 517 7.85e-59 204
MsG0480018861.01.T01 AT3G09140 28.505 214 124 8 294 488 5 208 1.10e-11 67.8
MsG0480018861.01.T01 AT3G09140 30.991 555 274 16 9 525 6 489 5.11e-56 196
MsG0480018861.01.T01 AT3G09140 28.514 249 148 9 294 522 5 243 5.06e-14 75.1
MsG0480018861.01.T01 AT5G01130 31.144 533 264 17 2 526 4 441 9.16e-56 194
MsG0480018861.01.T01 AT5G43240 30.712 534 295 17 13 525 10 489 1.29e-54 193
MsG0480018861.01.T01 AT5G43240 30.712 534 295 17 13 525 10 489 1.29e-54 193
MsG0480018861.01.T01 AT5G43240 30.712 534 295 17 13 525 10 489 1.29e-54 193
MsG0480018861.01.T01 AT5G01150 29.565 575 309 18 2 558 4 500 1.17e-49 179
MsG0480018861.01.T01 AT5G01140 29.381 565 295 19 2 558 4 472 5.47e-48 174
MsG0480018861.01.T01 AT3G09110 32.964 361 184 10 9 359 6 318 4.74e-43 157
MsG0480018861.01.T01 AT3G09110 27.542 236 141 6 298 522 9 225 2.09e-12 68.9
MsG0480018861.01.T01 AT3G09120 32.123 358 182 11 9 352 3 313 3.63e-42 154
MsG0480018861.01.T01 AT3G09120 27.888 251 158 9 298 539 6 242 4.04e-14 73.9
MsG0480018861.01.T01 AT5G37320 28.302 530 299 17 19 532 18 482 1.32e-41 156
MsG0480018861.01.T01 AT5G43240 28.496 379 212 11 161 525 12 345 2.12e-25 108

Find 113 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAGACAACCTAAGAATT+TGG 0.198714 4:-10738928 MsG0480018861.01.T01:CDS
TGGCGGGTTGTCTTTGTTCT+TGG 0.234472 4:+10736356 None:intergenic
TTGCACCCGCGACATTAAAA+TGG 0.255172 4:-10736301 MsG0480018861.01.T01:CDS
CATGCAGATGTTGATGGAAT+TGG 0.293472 4:-10738778 MsG0480018861.01.T01:CDS
CCCTCAGAATCCAAATTCTT+AGG 0.303798 4:+10738918 None:intergenic
ATAACTCAGTCTTCTAGTTT+AGG 0.304871 4:+10734918 None:intergenic
CCACTCACTACATATTATTA+TGG 0.306674 4:-10735994 MsG0480018861.01.T01:CDS
AGGGTCCATTGTAAAGGTTT+TGG 0.343635 4:-10736178 MsG0480018861.01.T01:CDS
AGTGTGCAGGCTTGGGAGTT+GGG 0.350352 4:-10738471 MsG0480018861.01.T01:intron
AGCTTCCTTACAATACCATT+AGG 0.351633 4:-10736198 MsG0480018861.01.T01:CDS
ATTCTTAGGTTGTCTAATAG+TGG 0.353324 4:+10738932 None:intergenic
AAGCAAGAGTATTGTAGTTA+TGG 0.369313 4:-10735958 MsG0480018861.01.T01:CDS
CTCTGACTGCTGATGCAAAC+TGG 0.370802 4:+10736331 None:intergenic
ACAGGGTTCCAAACATCATT+TGG 0.371988 4:+10739116 None:intergenic
TACTCACAACATTGGAAAAC+AGG 0.372182 4:-10738724 MsG0480018861.01.T01:CDS
AGCAAAAGCCTTGACTGAAA+TGG 0.377248 4:-10735869 MsG0480018861.01.T01:CDS
GAATTTGGATTCTGAGGGTC+AGG 0.378169 4:-10738913 MsG0480018861.01.T01:CDS
CCCTCACTCCAAATGATGTT+TGG 0.379098 4:-10739124 MsG0480018861.01.T01:CDS
GCTTCCTTACAATACCATTA+GGG 0.381396 4:-10736197 MsG0480018861.01.T01:CDS
CTATCTATTGTTCAAAAGAA+AGG 0.386299 4:+10734871 None:intergenic
GGAATGTTGAGGGGCTGGTT+TGG 0.395287 4:+10736030 None:intergenic
TAACTACAATACTCTTGCTT+TGG 0.396123 4:+10735961 None:intergenic
GAGTGTGCAGGCTTGGGAGT+TGG 0.397923 4:-10738472 MsG0480018861.01.T01:intron
ATGCAGATGTTGATGGAATT+GGG 0.399870 4:-10738777 MsG0480018861.01.T01:CDS
ACTGCTGATGCAAACTGGTT+TGG 0.403840 4:+10736336 None:intergenic
CAGAGGATCACGAGAGGTTA+AGG 0.404803 4:+10736404 None:intergenic
TTCTGATTTGAGTCAATTAG+AGG 0.405222 4:-10738751 MsG0480018861.01.T01:CDS
AACAACATTTGTTTGCATAC+AGG 0.416398 4:+10739098 None:intergenic
TGTAGTGTTGATGCTTCAAA+TGG 0.429023 4:-10738879 MsG0480018861.01.T01:CDS
AACGGTAGAATTAAAGATAG+AGG 0.436841 4:-10735929 MsG0480018861.01.T01:CDS
CAGAATCTTGATTGTACTTG+TGG 0.438965 4:-10738960 MsG0480018861.01.T01:CDS
ACTAGTTTGAACACACTTTG+AGG 0.444744 4:+10734965 None:intergenic
GACTTCCATGCAGATGTTGA+TGG 0.449539 4:-10738784 MsG0480018861.01.T01:CDS
CGTTGTTGTGTGTGGTTAAG+AGG 0.456967 4:+10739222 None:intergenic
ACCATTAGGGTCCATTGTAA+AGG 0.460196 4:-10736184 MsG0480018861.01.T01:CDS
TCTGAGGGTCAGGGGAATAG+TGG 0.460813 4:-10738903 MsG0480018861.01.T01:CDS
TTCTTAGGTTGTCTAATAGT+GGG 0.461481 4:+10738933 None:intergenic
ACCTTTACAATGGACCCTAA+TGG 0.477568 4:+10736183 None:intergenic
ACAACATTTGTTTGCATACA+GGG 0.481505 4:+10739099 None:intergenic
CTTGGAGTGTGCTCCTCTCA+AGG 0.488214 4:-10738446 MsG0480018861.01.T01:CDS
CATGAGGAATGTTGAGGGGC+TGG 0.489637 4:+10736025 None:intergenic
GCTGATGCAAACTGGTTTGG+CGG 0.490283 4:+10736339 None:intergenic
CCAAACATCATTTGGAGTGA+GGG 0.493650 4:+10739124 None:intergenic
ACCTAAGAATTTGGATTCTG+AGG 0.493742 4:-10738919 MsG0480018861.01.T01:CDS
AACATGACTTGAGGAATGAT+AGG 0.500146 4:+10734730 None:intergenic
CAAAGTGTGTTCAAACTAGT+AGG 0.500953 4:-10734962 MsG0480018861.01.T01:CDS
CGCTCCGTGTTACTCAATCC+TGG 0.504813 4:-10736075 MsG0480018861.01.T01:CDS
GTACAAAAGTGTAGAGAACT+TGG 0.506746 4:-10736121 MsG0480018861.01.T01:CDS
CCAAAGTGTGGTGCGACACC+AGG 0.506954 4:+10736057 None:intergenic
TCTTGGGTCCATTTCAGTCA+AGG 0.507464 4:+10735861 None:intergenic
AGGCTTGGGAGTTGGGACCT+TGG 0.516747 4:-10738464 MsG0480018861.01.T01:CDS
ACTACATATTATTATGGTAC+AGG 0.518635 4:-10735988 MsG0480018861.01.T01:CDS
TTCAAAATTGTATTTGTCAG+AGG 0.519558 4:+10736387 None:intergenic
GTAGTGTTGATGCTTCAAAT+GGG 0.522357 4:-10738878 MsG0480018861.01.T01:CDS
TTAATTCTTTCAAATATGAA+AGG 0.523699 4:+10735734 None:intergenic
TGGACCCTAATGGTATTGTA+AGG 0.526033 4:+10736193 None:intergenic
TTGTGGCAAGTGGAAGAGAA+AGG 0.533657 4:+10739252 None:intergenic
AGGCAAGAATTAGCAGAAAG+TGG 0.533853 4:+10735754 None:intergenic
CCTTGTTGATCTTGAAGTGA+AGG 0.535507 4:-10735704 MsG0480018861.01.T01:CDS
TCAAAATTTACACTGACTAG+TGG 0.539589 4:-10735032 MsG0480018861.01.T01:CDS
CTGATGCAAACTGGTTTGGC+GGG 0.543289 4:+10736340 None:intergenic
CTTCAAGATCAACAAGGGGA+AGG 0.544062 4:+10735710 None:intergenic
ATTTACACTGACTAGTGGAC+TGG 0.547720 4:-10735027 MsG0480018861.01.T01:CDS
CCTAAGAATTTGGATTCTGA+GGG 0.549967 4:-10738918 MsG0480018861.01.T01:CDS
TTGTAGTTATGGTTATCAAA+CGG 0.553602 4:-10735947 MsG0480018861.01.T01:CDS
ATGGAAGTCACTAAAGAACT+TGG 0.554238 4:+10738798 None:intergenic
GAGGAAGTTACTCACAACAT+TGG 0.556021 4:-10738732 MsG0480018861.01.T01:CDS
CCTGGTGTCGCACCACACTT+TGG 0.559338 4:-10736057 MsG0480018861.01.T01:CDS
TCCAAACATCATTTGGAGTG+AGG 0.565006 4:+10739123 None:intergenic
TCAGAATCATTATCATTCCT+CGG 0.566842 4:-10739179 MsG0480018861.01.T01:CDS
TCTCCTACACTATATAATGC+CGG 0.569153 4:+10735793 None:intergenic
GGAGTGATTTCTAAGTCGCA+TGG 0.571812 4:-10735904 MsG0480018861.01.T01:CDS
TGAACATTGATGATACTGAA+TGG 0.579711 4:-10739031 MsG0480018861.01.T01:CDS
GTAGAATTAAAGATAGAGGG+AGG 0.580072 4:-10735925 MsG0480018861.01.T01:CDS
ATTTGGATTCTGAGGGTCAG+GGG 0.580968 4:-10738911 MsG0480018861.01.T01:CDS
ACGGTAGAATTAAAGATAGA+GGG 0.581849 4:-10735928 MsG0480018861.01.T01:CDS
ACCATCCAAAACCTTTACAA+TGG 0.583435 4:+10736173 None:intergenic
TTGATCATCGTTGTTGTGTG+TGG 0.590152 4:+10739214 None:intergenic
GAGGAATGATAATGATTCTG+AGG 0.600918 4:+10739181 None:intergenic
TTGTACATGAGGAATGTTGA+GGG 0.601123 4:+10736020 None:intergenic
AGGCGAATGATTGTGGCAAG+TGG 0.604086 4:+10739242 None:intergenic
TAGTGTTGATGCTTCAAATG+GGG 0.609313 4:-10738877 MsG0480018861.01.T01:CDS
CCTTCACTTCAAGATCAACA+AGG 0.610416 4:+10735704 None:intergenic
AATTTGGATTCTGAGGGTCA+GGG 0.610725 4:-10738912 MsG0480018861.01.T01:CDS
CAATTCCATCAACATCTGCA+TGG 0.613002 4:+10738779 None:intergenic
GTGAGTGGTGGTTGTACATG+AGG 0.618523 4:+10736009 None:intergenic
AGGTTAAGGTGTACTTGAGG+AGG 0.618815 4:+10736418 None:intergenic
CTAATAGATAACATGACTTG+AGG 0.620584 4:+10734721 None:intergenic
GGTTAAGAGGCGAATGATTG+TGG 0.631701 4:+10739235 None:intergenic
TTCGAATGTGAGACCTTGAG+AGG 0.634691 4:+10738433 None:intergenic
GGTGGGATTTGTGAAGAGGC+CGG 0.636121 4:-10735812 MsG0480018861.01.T01:CDS
GATAAGCATTGGTGAAGCTG+AGG 0.638424 4:-10735680 MsG0480018861.01.T01:intron
GGGTTTGTACGCTTTCATAG+AGG 0.642551 4:+10739144 None:intergenic
CTTGAGAGGAGCACACTCCA+AGG 0.644983 4:+10738447 None:intergenic
TTGATGTCAAGGAAGCTGCA+AGG 0.648287 4:+10735051 None:intergenic
CTTCACTTCAAGATCAACAA+GGG 0.654366 4:+10735705 None:intergenic
GAAGTGAAGGTGATAAGCAT+TGG 0.654807 4:-10735691 MsG0480018861.01.T01:CDS
TGCAGATGTTGATGGAATTG+GGG 0.656452 4:-10738776 MsG0480018861.01.T01:CDS
GTTGTACATGAGGAATGTTG+AGG 0.658323 4:+10736019 None:intergenic
TTGTCTATGAAGATTCTGAG+AGG 0.671175 4:+10739338 None:intergenic
AGGCCGGCATTATATAGTGT+AGG 0.673674 4:-10735796 MsG0480018861.01.T01:CDS
TCACAACATTGGAAAACAGG+AGG 0.674233 4:-10738721 MsG0480018861.01.T01:intron
ATGTGGTGGGATTTGTGAAG+AGG 0.675538 4:-10735816 MsG0480018861.01.T01:CDS
TTCACTTCAAGATCAACAAG+GGG 0.676098 4:+10735706 None:intergenic
TAATAATATGTAGTGAGTGG+TGG 0.689437 4:+10735997 None:intergenic
TGTCGCTGTAGAATCAACAA+AGG 0.690298 4:-10739300 MsG0480018861.01.T01:CDS
GAGAGGTTAAGGTGTACTTG+AGG 0.692261 4:+10736415 None:intergenic
ATTTGTCAGAGGATCACGAG+AGG 0.703500 4:+10736398 None:intergenic
TGGTTTGGACAACCAAAGTG+TGG 0.703564 4:+10736045 None:intergenic
ATGTCAAGGAAGCTGCAAGG+AGG 0.721178 4:+10735054 None:intergenic
CCATAATAATATGTAGTGAG+TGG 0.727149 4:+10735994 None:intergenic
TGTACATGAGGAATGTTGAG+GGG 0.736702 4:+10736021 None:intergenic
GACACCAGGATTGAGTAACA+CGG 0.757821 4:+10736071 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAAAAAATGTTATATC+GGG - Chr4:10737578-10737597 MsG0480018861.01.T01:intron 10.0%
!! TCAAAATAATTAATGAAAAA+TGG - Chr4:10736165-10736184 MsG0480018861.01.T01:CDS 10.0%
!!! GTTTTAATAAAAAATATTTG+TGG - Chr4:10735793-10735812 MsG0480018861.01.T01:CDS 10.0%
!!! TTATTTTCTTAAAATTTGAT+TGG - Chr4:10735522-10735541 MsG0480018861.01.T01:intron 10.0%
!! AATTAACATATTATGAAACA+CGG + Chr4:10735583-10735602 None:intergenic 15.0%
!! GAAATAATATGTTTAGATAT+AGG - Chr4:10738795-10738814 MsG0480018861.01.T01:CDS 15.0%
!! TAATAAAATTATTGGACTTA+TGG + Chr4:10738615-10738634 None:intergenic 15.0%
!! TTAATTCTTTCAAATATGAA+AGG + Chr4:10738355-10738374 None:intergenic 15.0%
!! TTTAAAAAAATGTTATATCG+GGG - Chr4:10737579-10737598 MsG0480018861.01.T01:intron 15.0%
!!! ACATTTTTTTTTGATTTGTT+GGG + Chr4:10738254-10738273 None:intergenic 15.0%
!! AAATCAAAAAAAAATGTGGT+GGG - Chr4:10738257-10738276 MsG0480018861.01.T01:intron 20.0%
!! AACTTAGACAAATAAACAAA+AGG + Chr4:10738469-10738488 None:intergenic 20.0%
!! AATATGTTTAGATATAGGTT+GGG - Chr4:10738800-10738819 MsG0480018861.01.T01:CDS 20.0%
!! ATACAAGATATTAAACCAAA+TGG + Chr4:10737525-10737544 None:intergenic 20.0%
!! CAACAAATCAAAAAAAAATG+TGG - Chr4:10738253-10738272 MsG0480018861.01.T01:intron 20.0%
!! CATTTGTATATATGTTATCT+TGG - Chr4:10737603-10737622 MsG0480018861.01.T01:intron 20.0%
!! TAATATGTTTAGATATAGGT+TGG - Chr4:10738799-10738818 MsG0480018861.01.T01:CDS 20.0%
!! TAGTTGTTGTACTTAAATTA+CGG - Chr4:10737150-10737169 MsG0480018861.01.T01:intron 20.0%
!! TGATGGAAAAAATAACTATT+AGG + Chr4:10736630-10736649 None:intergenic 20.0%
!! TTCATATTGTAGTAAAATGA+GGG - Chr4:10735896-10735915 MsG0480018861.01.T01:CDS 20.0%
!!! AAAAGTGTTGAAATAGTTAA+AGG - Chr4:10737396-10737415 MsG0480018861.01.T01:intron 20.0%
!!! AATAGTTTGATAACTGAATA+AGG + Chr4:10736861-10736880 None:intergenic 20.0%
!!! ATATGTTAATTTGTAAACCT+TGG - Chr4:10735592-10735611 MsG0480018861.01.T01:intron 20.0%
!!! ATTTTTTTTTGATTTGTTGG+GGG + Chr4:10738252-10738271 None:intergenic 20.0%
!!! CACATTTTTTTTTGATTTGT+TGG + Chr4:10738255-10738274 None:intergenic 20.0%
!!! CATTTTTTTTTGATTTGTTG+GGG + Chr4:10738253-10738272 None:intergenic 20.0%
!!! TTTATAACTTGCTGTTTTTA+GGG - Chr4:10736333-10736352 MsG0480018861.01.T01:CDS 20.0%
! AAAGAATAGAAAGGAAAGTA+AGG - Chr4:10736423-10736442 MsG0480018861.01.T01:CDS 25.0%
! AAAGGATAAATCTTTCTCTT+TGG + Chr4:10736763-10736782 None:intergenic 25.0%
! AAATTATTGGACTTATGGAA+AGG + Chr4:10738610-10738629 None:intergenic 25.0%
! AACAGCAAGTTATAAAGTTA+AGG + Chr4:10736329-10736348 None:intergenic 25.0%
! ACAGAGTACAATAGATTTAA+GGG + Chr4:10736669-10736688 None:intergenic 25.0%
! ACTACATATTATTATGGTAC+AGG - Chr4:10738098-10738117 MsG0480018861.01.T01:intron 25.0%
! AGAGAAAGATTTATCCTTTA+AGG - Chr4:10736764-10736783 MsG0480018861.01.T01:intron 25.0%
! AGTTCAAAAAGTAAAAAGAG+TGG + Chr4:10736271-10736290 None:intergenic 25.0%
! ATAACTGAATAAGGAATGTA+AGG + Chr4:10736852-10736871 None:intergenic 25.0%
! ATAGAAAGTGATAAAACTCT+AGG + Chr4:10736576-10736595 None:intergenic 25.0%
! CAAATCAAAAAAAAATGTGG+TGG - Chr4:10738256-10738275 MsG0480018861.01.T01:intron 25.0%
! CTATCTATTGTTCAAAAGAA+AGG + Chr4:10739218-10739237 None:intergenic 25.0%
! CTTCATATTGTAGTAAAATG+AGG - Chr4:10735895-10735914 MsG0480018861.01.T01:CDS 25.0%
! GAGAAAGATTTATCCTTTAA+GGG - Chr4:10736765-10736784 MsG0480018861.01.T01:intron 25.0%
! TAACTGAATAAGGAATGTAA+GGG + Chr4:10736851-10736870 None:intergenic 25.0%
! TATAAAAAATGTAGTGTACC+TGG + Chr4:10738717-10738736 None:intergenic 25.0%
! TATTAGACAACCTAAGAATT+TGG - Chr4:10735158-10735177 MsG0480018861.01.T01:intron 25.0%
! TCTGATACATATTGAATTTC+AGG - Chr4:10736981-10737000 MsG0480018861.01.T01:intron 25.0%
! TGAATCATTATTCCAAAATG+TGG - Chr4:10735849-10735868 MsG0480018861.01.T01:CDS 25.0%
! TGGTGTACCATAAATTAAAA+GGG - Chr4:10737076-10737095 MsG0480018861.01.T01:intron 25.0%
! TTCAAAATTGTATTTGTCAG+AGG + Chr4:10737702-10737721 None:intergenic 25.0%
! TTGGTGTACCATAAATTAAA+AGG - Chr4:10737075-10737094 MsG0480018861.01.T01:intron 25.0%
! TTGTAGTTATGGTTATCAAA+CGG - Chr4:10738139-10738158 MsG0480018861.01.T01:intron 25.0%
! TTTACTACAATATGAAGGTT+CGG + Chr4:10735892-10735911 None:intergenic 25.0%
!! CTCATTTTACTACAATATGA+AGG + Chr4:10735897-10735916 None:intergenic 25.0%
!! TTTTATTAAAACTCGGTATC+CGG + Chr4:10735785-10735804 None:intergenic 25.0%
!!! AAATTAGTTTGTCAGTTAGA+GGG + Chr4:10736885-10736904 None:intergenic 25.0%
!!! AGTGATTCACATGAATTTTT+TGG + Chr4:10735018-10735037 None:intergenic 25.0%
!!! ATGTTTGCCCTTTTAATTTA+TGG + Chr4:10737086-10737105 None:intergenic 25.0%
!!! CTGCAATATAAAGGTTTTAA+AGG + Chr4:10735972-10735991 None:intergenic 25.0%
!!! CTTTATAACTTGCTGTTTTT+AGG - Chr4:10736332-10736351 MsG0480018861.01.T01:CDS 25.0%
!!! GTGATTCACATGAATTTTTT+GGG + Chr4:10735017-10735036 None:intergenic 25.0%
!!! TTTACTTTTTGAACTTGCAT+TGG - Chr4:10736276-10736295 MsG0480018861.01.T01:CDS 25.0%
!!! TTTGTACCTTACTAGTTTTT+TGG - Chr4:10739243-10739262 MsG0480018861.01.T01:CDS 25.0%
!!! TTTTTAGGGTAGTTTGTATT+TGG - Chr4:10736347-10736366 MsG0480018861.01.T01:CDS 25.0%
AAACACTCACAATGTTATGA+TGG - Chr4:10737114-10737133 MsG0480018861.01.T01:intron 30.0%
AACAACATTTGTTTGCATAC+AGG + Chr4:10734991-10735010 None:intergenic 30.0%
AACCTTAAAGGGAATAAGTT+GGG - Chr4:10736692-10736711 MsG0480018861.01.T01:intron 30.0%
AACGGTAGAATTAAAGATAG+AGG - Chr4:10738157-10738176 MsG0480018861.01.T01:intron 30.0%
AAGTAAGGAAGTAAATAGAG+CGG - Chr4:10736438-10736457 MsG0480018861.01.T01:intron 30.0%
AATTCAATGCCTCAAATTAC+AGG + Chr4:10736242-10736261 None:intergenic 30.0%
ACAACATTTGTTTGCATACA+GGG + Chr4:10734990-10735009 None:intergenic 30.0%
ACACTGTTATTGTTACCATT+TGG - Chr4:10737507-10737526 MsG0480018861.01.T01:intron 30.0%
ACGGTAGAATTAAAGATAGA+GGG - Chr4:10738158-10738177 MsG0480018861.01.T01:intron 30.0%
CCACTCACTACATATTATTA+TGG - Chr4:10738092-10738111 MsG0480018861.01.T01:intron 30.0%
CCATAATAATATGTAGTGAG+TGG + Chr4:10738095-10738114 None:intergenic 30.0%
CTAATAGATAACATGACTTG+AGG + Chr4:10739368-10739387 None:intergenic 30.0%
CTATGTGAGAAAGAATAGAA+AGG - Chr4:10736414-10736433 MsG0480018861.01.T01:CDS 30.0%
GACAAACCAAAAAACTAGTA+AGG + Chr4:10739252-10739271 None:intergenic 30.0%
GACAGAGTACAATAGATTTA+AGG + Chr4:10736670-10736689 None:intergenic 30.0%
GATGAGCAATATTGGAAATT+TGG + Chr4:10737223-10737242 None:intergenic 30.0%
GCAATATTGGAAATTTGGAA+TGG + Chr4:10737218-10737237 None:intergenic 30.0%
GTATCAAAATGCTACTCAAA+CGG - Chr4:10736131-10736150 MsG0480018861.01.T01:CDS 30.0%
TAACAATGTCCTGTAATTTG+AGG - Chr4:10736230-10736249 MsG0480018861.01.T01:CDS 30.0%
TAACTACAATACTCTTGCTT+TGG + Chr4:10738128-10738147 None:intergenic 30.0%
TAATAATATGTAGTGAGTGG+TGG + Chr4:10738092-10738111 None:intergenic 30.0%
TAGTAAAATGAGGGTAATTG+TGG - Chr4:10735905-10735924 MsG0480018861.01.T01:CDS 30.0%
TCAGAATCATTATCATTCCT+CGG - Chr4:10734907-10734926 MsG0480018861.01.T01:exon 30.0%
TGTTATGATGGTTTACTTAG+TGG - Chr4:10737126-10737145 MsG0480018861.01.T01:intron 30.0%
TTCAGTATCTGTACATCAAA+AGG + Chr4:10737648-10737667 None:intergenic 30.0%
TTCGAATGCTATACATATCA+TGG - Chr4:10738914-10738933 MsG0480018861.01.T01:CDS 30.0%
TTTGATCGATGCTAACAAAT+CGG - Chr4:10736812-10736831 MsG0480018861.01.T01:intron 30.0%
! AGTCAATATGCACTTTTGTT+GGG - Chr4:10739326-10739345 MsG0480018861.01.T01:CDS 30.0%
! ATTAGTATTTTTCTCCACCA+TGG + Chr4:10737434-10737453 None:intergenic 30.0%
! ATTCTTAGGTTGTCTAATAG+TGG + Chr4:10735157-10735176 None:intergenic 30.0%
! GGAAATTTGGAATGGATATT+TGG + Chr4:10737210-10737229 None:intergenic 30.0%
! TAGTCAATATGCACTTTTGT+TGG - Chr4:10739325-10739344 MsG0480018861.01.T01:CDS 30.0%
! TCAAAATTTACACTGACTAG+TGG - Chr4:10739054-10739073 MsG0480018861.01.T01:CDS 30.0%
! TGAACATTGATGATACTGAA+TGG - Chr4:10735055-10735074 MsG0480018861.01.T01:CDS 30.0%
! TGGAAGCATAAATAAAGATG+AGG + Chr4:10737044-10737063 None:intergenic 30.0%
! TTCAAATGGGGTTTTTGTTA+AGG - Chr4:10735221-10735240 MsG0480018861.01.T01:intron 30.0%
! TTCTGATTTGAGTCAATTAG+AGG - Chr4:10735335-10735354 MsG0480018861.01.T01:intron 30.0%
! TTCTTAGGTTGTCTAATAGT+GGG + Chr4:10735156-10735175 None:intergenic 30.0%
!! AAGCAAGAGTATTGTAGTTA+TGG - Chr4:10738128-10738147 MsG0480018861.01.T01:intron 30.0%
!! AATTAGTTTGTCAGTTAGAG+GGG + Chr4:10736884-10736903 None:intergenic 30.0%
!! ATAACTCAGTCTTCTAGTTT+AGG + Chr4:10739171-10739190 None:intergenic 30.0%
!! CAGTGTAAATTTTGATGTCA+AGG + Chr4:10739049-10739068 None:intergenic 30.0%
!! GAAATTAGTTTGTCAGTTAG+AGG + Chr4:10736886-10736905 None:intergenic 30.0%
!! TGTAATTTGAGGCATTGAAT+TGG - Chr4:10736241-10736260 MsG0480018861.01.T01:CDS 30.0%
!!! AGACGTAGTTTTGTGATTTT+TGG - Chr4:10738754-10738773 MsG0480018861.01.T01:CDS 30.0%
!!! GTAGTTTTGTGATTTTTGGT+GGG - Chr4:10738758-10738777 MsG0480018861.01.T01:CDS 30.0%
AAATCAAGAGGTAAGAATCC+TGG + Chr4:10738993-10739012 None:intergenic 35.0%
AACATGACTTGAGGAATGAT+AGG + Chr4:10739359-10739378 None:intergenic 35.0%
AACTATTAGGATCAACCATC+TGG + Chr4:10736617-10736636 None:intergenic 35.0%
AAGTTGGGTAAAAGAGAAGA+TGG - Chr4:10736707-10736726 MsG0480018861.01.T01:intron 35.0%
AATACAGTAGGAGGGAATAA+GGG - Chr4:10736498-10736517 MsG0480018861.01.T01:intron 35.0%
AATTTAGTAGGTCCTTGAAC+CGG - Chr4:10735763-10735782 MsG0480018861.01.T01:CDS 35.0%
ACAACTTCAATCGTAAGTGT+CGG + Chr4:10735444-10735463 None:intergenic 35.0%
ACAGAGAAACAGAATACAGT+AGG - Chr4:10736486-10736505 MsG0480018861.01.T01:intron 35.0%
ACCATCCAAAACCTTTACAA+TGG + Chr4:10737916-10737935 None:intergenic 35.0%
ACCTAAGAATTTGGATTCTG+AGG - Chr4:10735167-10735186 MsG0480018861.01.T01:intron 35.0%
AGAAACAGAATACAGTAGGA+GGG - Chr4:10736490-10736509 MsG0480018861.01.T01:intron 35.0%
AGATGAGGTGAATGAAGATA+AGG + Chr4:10737029-10737048 None:intergenic 35.0%
AGCTTCCTTACAATACCATT+AGG - Chr4:10737888-10737907 MsG0480018861.01.T01:intron 35.0%
ATCTGTACATCAAAAGGACA+GGG + Chr4:10737642-10737661 None:intergenic 35.0%
ATGGAAGTCACTAAAGAACT+TGG + Chr4:10735291-10735310 None:intergenic 35.0%
ATTATTCCAAAATGTGGCCA+TGG - Chr4:10735855-10735874 MsG0480018861.01.T01:CDS 35.0%
CAAAGTGTGTTCAAACTAGT+AGG - Chr4:10739124-10739143 MsG0480018861.01.T01:CDS 35.0%
CAATTGCAGCTGCAATATAA+AGG + Chr4:10735981-10736000 None:intergenic 35.0%
CAGAATAATGAGTGTGACAA+TGG + Chr4:10736965-10736984 None:intergenic 35.0%
CAGAATCTTGATTGTACTTG+TGG - Chr4:10735126-10735145 MsG0480018861.01.T01:intron 35.0%
CATATTATGAAACACGGACA+CGG + Chr4:10735577-10735596 None:intergenic 35.0%
CCTAACTGATATCATAAGCT+GGG - Chr4:10736916-10736935 MsG0480018861.01.T01:intron 35.0%
CCTAAGAATTTGGATTCTGA+GGG - Chr4:10735168-10735187 MsG0480018861.01.T01:intron 35.0%
CTTCACTTCAAGATCAACAA+GGG + Chr4:10738384-10738403 None:intergenic 35.0%
CTTGTTACGATGAGCAATAT+TGG + Chr4:10737231-10737250 None:intergenic 35.0%
GAACCTTAAAGGGAATAAGT+TGG - Chr4:10736691-10736710 MsG0480018861.01.T01:intron 35.0%
GCTTCCTTACAATACCATTA+GGG - Chr4:10737889-10737908 MsG0480018861.01.T01:intron 35.0%
GTACACCAAGAAACTTTATG+TGG + Chr4:10737064-10737083 None:intergenic 35.0%
GTAGAATTAAAGATAGAGGG+AGG - Chr4:10738161-10738180 MsG0480018861.01.T01:intron 35.0%
GTTCAAGGACCTACTAAATT+GGG + Chr4:10735763-10735782 None:intergenic 35.0%
TACCCAACTTATTCCCTTTA+AGG + Chr4:10736697-10736716 None:intergenic 35.0%
TACTCACAACATTGGAAAAC+AGG - Chr4:10735362-10735381 MsG0480018861.01.T01:intron 35.0%
TACTCTGTCAGAACCTTAAA+GGG - Chr4:10736681-10736700 MsG0480018861.01.T01:intron 35.0%
TATCAGATGCGTATCAGTAT+CGG + Chr4:10738576-10738595 None:intergenic 35.0%
TATCTGTACATCAAAAGGAC+AGG + Chr4:10737643-10737662 None:intergenic 35.0%
TCATATCATACTGTGTATCC+AGG - Chr4:10738972-10738991 MsG0480018861.01.T01:CDS 35.0%
TCCTAACTGATATCATAAGC+TGG - Chr4:10736915-10736934 MsG0480018861.01.T01:intron 35.0%
TCTCCTACACTATATAATGC+CGG + Chr4:10738296-10738315 None:intergenic 35.0%
TGCTTCCACATAAAGTTTCT+TGG - Chr4:10737056-10737075 MsG0480018861.01.T01:intron 35.0%
TTAATGAATGCTCTCCTATC+AGG + Chr4:10736391-10736410 None:intergenic 35.0%
TTCAACATGACACAGATATG+AGG + Chr4:10738951-10738970 None:intergenic 35.0%
TTCACTTCAAGATCAACAAG+GGG + Chr4:10738383-10738402 None:intergenic 35.0%
TTGGATGTTTAGACTGTTCT+TGG - Chr4:10736295-10736314 MsG0480018861.01.T01:CDS 35.0%
TTGTACATGAGGAATGTTGA+GGG + Chr4:10738069-10738088 None:intergenic 35.0%
TTGTCTATGAAGATTCTGAG+AGG + Chr4:10734751-10734770 None:intergenic 35.0%
! ACTAGTTTGAACACACTTTG+AGG + Chr4:10739124-10739143 None:intergenic 35.0%
! ATGCAGATGTTGATGGAATT+GGG - Chr4:10735309-10735328 MsG0480018861.01.T01:intron 35.0%
! ATGTTTAGATATAGGTTGGG+TGG - Chr4:10738803-10738822 MsG0480018861.01.T01:CDS 35.0%
! CTCCTTGTGCTAATTTTTGT+GGG - Chr4:10735678-10735697 MsG0480018861.01.T01:intron 35.0%
! GAAGTCAACAAAGTTTTCAC+TGG + Chr4:10737862-10737881 None:intergenic 35.0%
! GAGGAATGATAATGATTCTG+AGG + Chr4:10734908-10734927 None:intergenic 35.0%
! GGGTTTTTGTTAAGGACAAT+GGG - Chr4:10735229-10735248 MsG0480018861.01.T01:intron 35.0%
! GGTTTGTCTGTTCAGTTTTA+TGG - Chr4:10739264-10739283 MsG0480018861.01.T01:CDS 35.0%
! GTACAAAAGTGTAGAGAACT+TGG - Chr4:10737965-10737984 MsG0480018861.01.T01:intron 35.0%
! TGTTTAGATATAGGTTGGGT+GGG - Chr4:10738804-10738823 MsG0480018861.01.T01:CDS 35.0%
! TTGGACTTATGGAAAGGTAT+TGG + Chr4:10738604-10738623 None:intergenic 35.0%
! TTGGATGGTAACTCTTTTGT+TGG - Chr4:10737927-10737946 MsG0480018861.01.T01:intron 35.0%
!! ATCGTTTTTGACTCTTCTTG+CGG + Chr4:10734727-10734746 None:intergenic 35.0%
!! GTACAACTCTGGCTTTAATT+GGG - Chr4:10735708-10735727 MsG0480018861.01.T01:CDS 35.0%
!! GTAGTGTTGATGCTTCAAAT+GGG - Chr4:10735208-10735227 MsG0480018861.01.T01:intron 35.0%
!! TAACGTCCATTTTAATGTCG+CGG + Chr4:10737794-10737813 None:intergenic 35.0%
!! TACAACTCTGGCTTTAATTG+GGG - Chr4:10735709-10735728 MsG0480018861.01.T01:CDS 35.0%
!! TAGTGTTGATGCTTCAAATG+GGG - Chr4:10735209-10735228 MsG0480018861.01.T01:intron 35.0%
!! TGATAGGAGAGCATTCATTA+AGG - Chr4:10736390-10736409 MsG0480018861.01.T01:CDS 35.0%
!! TGGACTTATGGAAAGGTATT+GGG + Chr4:10738603-10738622 None:intergenic 35.0%
!! TGTACAACTCTGGCTTTAAT+TGG - Chr4:10735707-10735726 MsG0480018861.01.T01:CDS 35.0%
!! TGTAGTGTTGATGCTTCAAA+TGG - Chr4:10735207-10735226 MsG0480018861.01.T01:intron 35.0%
!!! CGTAGTTTTGTGATTTTTGG+TGG - Chr4:10738757-10738776 MsG0480018861.01.T01:CDS 35.0%
!!! TCCATTGTAAAGGTTTTGGA+TGG - Chr4:10737912-10737931 MsG0480018861.01.T01:intron 35.0%
AACAGAGAGTCGTATACAAG+CGG + Chr4:10736794-10736813 None:intergenic 40.0%
ACAGGGTTCCAAACATCATT+TGG + Chr4:10734973-10734992 None:intergenic 40.0%
ACCATTAGGGTCCATTGTAA+AGG - Chr4:10737902-10737921 MsG0480018861.01.T01:intron 40.0%
ACCTTTACAATGGACCCTAA+TGG + Chr4:10737906-10737925 None:intergenic 40.0%
AGAACTATGTTGTGAATCGC+CGG - Chr4:10736020-10736039 MsG0480018861.01.T01:CDS 40.0%
AGCAAAAGCCTTGACTGAAA+TGG - Chr4:10738217-10738236 MsG0480018861.01.T01:intron 40.0%
AGCCCACAAAAATTAGCACA+AGG + Chr4:10735683-10735702 None:intergenic 40.0%
AGGCAAGAATTAGCAGAAAG+TGG + Chr4:10738335-10738354 None:intergenic 40.0%
ATCTGGATCAATAGGATCAG+AGG + Chr4:10736600-10736619 None:intergenic 40.0%
CAATTCCATCAACATCTGCA+TGG + Chr4:10735310-10735329 None:intergenic 40.0%
CATTGGAAAACAGGAGGTAA+TGG - Chr4:10735371-10735390 MsG0480018861.01.T01:intron 40.0%
CCACAAAAATTAGCACAAGG+AGG + Chr4:10735680-10735699 None:intergenic 40.0%
CCCAGCTTATGATATCAGTT+AGG + Chr4:10736919-10736938 None:intergenic 40.0%
CCCTCAGAATCCAAATTCTT+AGG + Chr4:10735171-10735190 None:intergenic 40.0%
CCTGCAAATTGCAAATCAAG+AGG + Chr4:10739005-10739024 None:intergenic 40.0%
CCTTCACTTCAAGATCAACA+AGG + Chr4:10738385-10738404 None:intergenic 40.0%
CCTTGTTGATCTTGAAGTGA+AGG - Chr4:10738382-10738401 MsG0480018861.01.T01:intron 40.0%
CTATGCTTCATAGACCACAT+GGG + Chr4:10738513-10738532 None:intergenic 40.0%
GAAGTGAAGGTGATAAGCAT+TGG - Chr4:10738395-10738414 MsG0480018861.01.T01:intron 40.0%
GAATACAGTAGGAGGGAATA+AGG - Chr4:10736497-10736516 MsG0480018861.01.T01:intron 40.0%
GAGAAACAGAATACAGTAGG+AGG - Chr4:10736489-10736508 MsG0480018861.01.T01:intron 40.0%
GAGGAAGTTACTCACAACAT+TGG - Chr4:10735354-10735373 MsG0480018861.01.T01:intron 40.0%
GATCAACCATCTGGATCAAT+AGG + Chr4:10736608-10736627 None:intergenic 40.0%
GATTTAAGGGCAATTGCAAC+AGG + Chr4:10736656-10736675 None:intergenic 40.0%
GCAATTGCAACAGGAATTGA+TGG + Chr4:10736647-10736666 None:intergenic 40.0%
GCATCTGTTAAGAACCTGAT+AGG - Chr4:10736374-10736393 MsG0480018861.01.T01:CDS 40.0%
GGTTCAAGGACCTACTAAAT+TGG + Chr4:10735764-10735783 None:intergenic 40.0%
GTACTCTGTCAGAACCTTAA+AGG - Chr4:10736680-10736699 MsG0480018861.01.T01:intron 40.0%
GTTGTACATGAGGAATGTTG+AGG + Chr4:10738070-10738089 None:intergenic 40.0%
TAACCCTAGACTGAAATGAC+CGG + Chr4:10736042-10736061 None:intergenic 40.0%
TCACAACATTGGAAAACAGG+AGG - Chr4:10735365-10735384 MsG0480018861.01.T01:intron 40.0%
TCATAAGCTGGGTGATCTAT+TGG - Chr4:10736927-10736946 MsG0480018861.01.T01:intron 40.0%
TCGATGCTAACAAATCGGAA+AGG - Chr4:10736817-10736836 MsG0480018861.01.T01:intron 40.0%
TCTATGCTTCATAGACCACA+TGG + Chr4:10738514-10738533 None:intergenic 40.0%
TCTGATCCTATTGATCCAGA+TGG - Chr4:10736599-10736618 MsG0480018861.01.T01:intron 40.0%
TGGACCCTAATGGTATTGTA+AGG + Chr4:10737896-10737915 None:intergenic 40.0%
TGTACATGAGGAATGTTGAG+GGG + Chr4:10738068-10738087 None:intergenic 40.0%
TGTCGCTGTAGAATCAACAA+AGG - Chr4:10734786-10734805 MsG0480018861.01.T01:three_prime_UTR 40.0%
TTGATCATCGTTGTTGTGTG+TGG + Chr4:10734875-10734894 None:intergenic 40.0%
! AATTTGGATTCTGAGGGTCA+GGG - Chr4:10735174-10735193 MsG0480018861.01.T01:intron 40.0%
! AGGGTCCATTGTAAAGGTTT+TGG - Chr4:10737908-10737927 MsG0480018861.01.T01:intron 40.0%
! ATTTACACTGACTAGTGGAC+TGG - Chr4:10739059-10739078 MsG0480018861.01.T01:CDS 40.0%
! CATGCAGATGTTGATGGAAT+TGG - Chr4:10735308-10735327 MsG0480018861.01.T01:intron 40.0%
! CCAAACATCATTTGGAGTGA+GGG + Chr4:10734965-10734984 None:intergenic 40.0%
! CCTCCTTGTGCTAATTTTTG+TGG - Chr4:10735677-10735696 MsG0480018861.01.T01:intron 40.0%
! GGGGTTTTTGTTAAGGACAA+TGG - Chr4:10735228-10735247 MsG0480018861.01.T01:intron 40.0%
! GTTTAGATATAGGTTGGGTG+GGG - Chr4:10738805-10738824 MsG0480018861.01.T01:CDS 40.0%
! TCCAAACATCATTTGGAGTG+AGG + Chr4:10734966-10734985 None:intergenic 40.0%
! TGCAGATGTTGATGGAATTG+GGG - Chr4:10735310-10735329 MsG0480018861.01.T01:intron 40.0%
! TTTAGATATAGGTTGGGTGG+GGG - Chr4:10738806-10738825 MsG0480018861.01.T01:CDS 40.0%
!! AACGTCCATTTTAATGTCGC+GGG + Chr4:10737793-10737812 None:intergenic 40.0%
!! ACTTATGGAAAGGTATTGGG+GGG + Chr4:10738600-10738619 None:intergenic 40.0%
!! CCTCTTGATTTGCAATTTGC+AGG - Chr4:10739002-10739021 MsG0480018861.01.T01:CDS 40.0%
!! GACTTATGGAAAGGTATTGG+GGG + Chr4:10738601-10738620 None:intergenic 40.0%
!! GGACTTATGGAAAGGTATTG+GGG + Chr4:10738602-10738621 None:intergenic 40.0%
!! GTTCAGTTTTATGGACTCAG+TGG - Chr4:10739273-10739292 MsG0480018861.01.T01:CDS 40.0%
!! TGTGTGTGTGTGTTTTGGAT+AGG + Chr4:10737486-10737505 None:intergenic 40.0%
!! TTGATTTGTTGGGGGATCTT+GGG + Chr4:10738244-10738263 None:intergenic 40.0%
!! TTTGATTTGTTGGGGGATCT+TGG + Chr4:10738245-10738264 None:intergenic 40.0%
!!! GGACAATGGGTTGTTGTTTT+TGG - Chr4:10735242-10735261 MsG0480018861.01.T01:intron 40.0%
AAAACTCGGTATCCGGTTCA+AGG + Chr4:10735778-10735797 None:intergenic 45.0%
AAAGGACCTTGTTCGAACCA+TGG - Chr4:10737414-10737433 MsG0480018861.01.T01:intron 45.0%
ACAGAGAGTCGTATACAAGC+GGG + Chr4:10736793-10736812 None:intergenic 45.0%
ACTGCTGATGCAAACTGGTT+TGG + Chr4:10737753-10737772 None:intergenic 45.0%
AGGCCGGCATTATATAGTGT+AGG - Chr4:10738290-10738309 MsG0480018861.01.T01:intron 45.0%
AGGTTAAGGTGTACTTGAGG+AGG + Chr4:10737671-10737690 None:intergenic 45.0%
ATTTGTCAGAGGATCACGAG+AGG + Chr4:10737691-10737710 None:intergenic 45.0%
CCCTCACTCCAAATGATGTT+TGG - Chr4:10734962-10734981 MsG0480018861.01.T01:CDS 45.0%
CGTTGTTGTGTGTGGTTAAG+AGG + Chr4:10734867-10734886 None:intergenic 45.0%
CTTCAAGATCAACAAGGGGA+AGG + Chr4:10738379-10738398 None:intergenic 45.0%
GACACCAGGATTGAGTAACA+CGG + Chr4:10738018-10738037 None:intergenic 45.0%
GACTTCCATGCAGATGTTGA+TGG - Chr4:10735302-10735321 MsG0480018861.01.T01:intron 45.0%
GAGAGGTTAAGGTGTACTTG+AGG + Chr4:10737674-10737693 None:intergenic 45.0%
GCTACTCAAACGGTAATGTC+TGG - Chr4:10736141-10736160 MsG0480018861.01.T01:CDS 45.0%
GGAGTGATTTCTAAGTCGCA+TGG - Chr4:10738182-10738201 MsG0480018861.01.T01:intron 45.0%
GGGTTTGTACGCTTTCATAG+AGG + Chr4:10734945-10734964 None:intergenic 45.0%
GGTTAAGAGGCGAATGATTG+TGG + Chr4:10734854-10734873 None:intergenic 45.0%
TCTTGGGTCCATTTCAGTCA+AGG + Chr4:10738228-10738247 None:intergenic 45.0%
TTCAGGTGTTCAACGTAAGC+AGG - Chr4:10736998-10737017 MsG0480018861.01.T01:intron 45.0%
TTCGAATGTGAGACCTTGAG+AGG + Chr4:10735656-10735675 None:intergenic 45.0%
TTGATGTCAAGGAAGCTGCA+AGG + Chr4:10739038-10739057 None:intergenic 45.0%
TTGCACCCGCGACATTAAAA+TGG - Chr4:10737785-10737804 MsG0480018861.01.T01:intron 45.0%
TTGTAAACCTTGGAGTGTGC+AGG - Chr4:10735602-10735621 MsG0480018861.01.T01:intron 45.0%
TTGTGGCAAGTGGAAGAGAA+AGG + Chr4:10734837-10734856 None:intergenic 45.0%
! AGAGGTTTTTGATGCTTCCG+AGG + Chr4:10734927-10734946 None:intergenic 45.0%
! AGTAAGAACCGCGAGAGTTT+TGG - Chr4:10736534-10736553 MsG0480018861.01.T01:intron 45.0%
! ATGTGGTGGGATTTGTGAAG+AGG - Chr4:10738270-10738289 MsG0480018861.01.T01:intron 45.0%
! ATTTGGATTCTGAGGGTCAG+GGG - Chr4:10735175-10735194 MsG0480018861.01.T01:intron 45.0%
! GAATTTGGATTCTGAGGGTC+AGG - Chr4:10735173-10735192 MsG0480018861.01.T01:intron 45.0%
! GTAAGAACCGCGAGAGTTTT+GGG - Chr4:10736535-10736554 MsG0480018861.01.T01:intron 45.0%
! GTGTGTGTGTGTGTGTGTTT+TGG + Chr4:10737491-10737510 None:intergenic 45.0%
! TAAGAACCGCGAGAGTTTTG+GGG - Chr4:10736536-10736555 MsG0480018861.01.T01:intron 45.0%
! TGGTTTGGACAACCAAAGTG+TGG + Chr4:10738044-10738063 None:intergenic 45.0%
!! CTTATGGAAAGGTATTGGGG+GGG + Chr4:10738599-10738618 None:intergenic 45.0%
!! GATAAGCATTGGTGAAGCTG+AGG - Chr4:10738406-10738425 MsG0480018861.01.T01:intron 45.0%
!! GGTTGGTCTCCCAATTTAGT+AGG - Chr4:10735751-10735770 MsG0480018861.01.T01:CDS 45.0%
!! TGGGCTAGTATGTACAACTC+TGG - Chr4:10735697-10735716 MsG0480018861.01.T01:CDS 45.0%
!! TAAAGAATTAATAAAATTAT+TGG + Chr4:10738623-10738642 None:intergenic 5.0%
!! TATTTAAAAAAATGTTATAT+CGG - Chr4:10737577-10737596 MsG0480018861.01.T01:intron 5.0%
!!! AAATATTTTTTATTAAAACT+CGG + Chr4:10735792-10735811 None:intergenic 5.0%
AGGCGAATGATTGTGGCAAG+TGG + Chr4:10734847-10734866 None:intergenic 50.0%
ATACAAGCGGGAGCCCTTAA+AGG + Chr4:10736781-10736800 None:intergenic 50.0%
ATCGCCGGTCATTTCAGTCT+AGG - Chr4:10736035-10736054 MsG0480018861.01.T01:CDS 50.0%
ATGTCAAGGAAGCTGCAAGG+AGG + Chr4:10739035-10739054 None:intergenic 50.0%
CAGAGGATCACGAGAGGTTA+AGG + Chr4:10737685-10737704 None:intergenic 50.0%
CGACATCGCAACTGCAATTG+CGG + Chr4:10735940-10735959 None:intergenic 50.0%
CTCTGACTGCTGATGCAAAC+TGG + Chr4:10737758-10737777 None:intergenic 50.0%
CTTCATAGACCACATGGGAG+GGG + Chr4:10738508-10738527 None:intergenic 50.0%
GCTTCATAGACCACATGGGA+GGG + Chr4:10738509-10738528 None:intergenic 50.0%
GTGAGTGGTGGTTGTACATG+AGG + Chr4:10738080-10738099 None:intergenic 50.0%
GTTCGGATCATAACCAGCCA+TGG + Chr4:10735875-10735894 None:intergenic 50.0%
TCGCCGGTCATTTCAGTCTA+GGG - Chr4:10736036-10736055 MsG0480018861.01.T01:CDS 50.0%
TCTCCACCATGGTTCGAACA+AGG + Chr4:10737423-10737442 None:intergenic 50.0%
TGCTTCATAGACCACATGGG+AGG + Chr4:10738510-10738529 None:intergenic 50.0%
TTCATAGACCACATGGGAGG+GGG + Chr4:10738507-10738526 None:intergenic 50.0%
TTCCAAAATGTGGCCATGGC+TGG - Chr4:10735859-10735878 MsG0480018861.01.T01:CDS 50.0%
! AAAGTGCCCCAAAACTCTCG+CGG + Chr4:10736545-10736564 None:intergenic 50.0%
! AACCAGCCATGGCCACATTT+TGG + Chr4:10735864-10735883 None:intergenic 50.0%
! TGCAGCTGCAATTGCTGTTG+CGG - Chr4:10735987-10736006 MsG0480018861.01.T01:CDS 50.0%
!! CTGATGCAAACTGGTTTGGC+GGG + Chr4:10737749-10737768 None:intergenic 50.0%
!! GCTGATGCAAACTGGTTTGG+CGG + Chr4:10737750-10737769 None:intergenic 50.0%
!! TGGCGGGTTGTCTTTGTTCT+TGG + Chr4:10737733-10737752 None:intergenic 50.0%
AACCTTGGAGTGTGCAGGCT+TGG - Chr4:10735607-10735626 MsG0480018861.01.T01:intron 55.0%
ACATGGGAGGGGGATCAAAG+AGG + Chr4:10738497-10738516 None:intergenic 55.0%
ACCTTGGAGTGTGCAGGCTT+GGG - Chr4:10735608-10735627 MsG0480018861.01.T01:intron 55.0%
AGTGTGCAGGCTTGGGAGTT+GGG - Chr4:10735615-10735634 MsG0480018861.01.T01:intron 55.0%
CATGAGGAATGTTGAGGGGC+TGG + Chr4:10738064-10738083 None:intergenic 55.0%
CGACATGTCAGTGTCGTGTC+TGG - Chr4:10735548-10735567 MsG0480018861.01.T01:intron 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - Chr4:10735640-10735659 MsG0480018861.01.T01:intron 55.0%
GGACCTTGTTCGAACCATGG+TGG - Chr4:10737417-10737436 MsG0480018861.01.T01:intron 55.0%
GGTGGGATTTGTGAAGAGGC+CGG - Chr4:10738274-10738293 MsG0480018861.01.T01:intron 55.0%
TCTGAGGGTCAGGGGAATAG+TGG - Chr4:10735183-10735202 MsG0480018861.01.T01:intron 55.0%
TCTTTGATCCCCCTCCCATG+TGG - Chr4:10738496-10738515 MsG0480018861.01.T01:intron 55.0%
TTTAATTGGGGCCCCACGAG+TGG - Chr4:10735721-10735740 MsG0480018861.01.T01:CDS 55.0%
! CGCTCCGTGTTACTCAATCC+TGG - Chr4:10738011-10738030 MsG0480018861.01.T01:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + Chr4:10735642-10735661 None:intergenic 55.0%
!! GGAATGTTGAGGGGCTGGTT+TGG + Chr4:10738059-10738078 None:intergenic 55.0%
AGGCTTGGGAGTTGGGACCT+TGG - Chr4:10735622-10735641 MsG0480018861.01.T01:intron 60.0%
CCAAAGTGTGGTGCGACACC+AGG + Chr4:10738032-10738051 None:intergenic 60.0%
GAGTGTGCAGGCTTGGGAGT+TGG - Chr4:10735614-10735633 MsG0480018861.01.T01:intron 60.0%
TCCCAAGCCTGCACACTCCA+AGG + Chr4:10735612-10735631 None:intergenic 60.0%
!! CCTGGTGTCGCACCACACTT+TGG - Chr4:10738029-10738048 MsG0480018861.01.T01:intron 60.0%
AACCCCACCGTCCACTCGTG+GGG + Chr4:10735735-10735754 None:intergenic 65.0%
ATTGGGGCCCCACGAGTGGA+CGG - Chr4:10735725-10735744 MsG0480018861.01.T01:CDS 65.0%
CAACCCCACCGTCCACTCGT+GGG + Chr4:10735736-10735755 None:intergenic 65.0%
CCAACCCCACCGTCCACTCG+TGG + Chr4:10735737-10735756 None:intergenic 70.0%
CCACGAGTGGACGGTGGGGT+TGG - Chr4:10735734-10735753 MsG0480018861.01.T01:CDS 70.0%
GGCCCCACGAGTGGACGGTG+GGG - Chr4:10735730-10735749 MsG0480018861.01.T01:CDS 75.0%
GGGCCCCACGAGTGGACGGT+GGG - Chr4:10735729-10735748 MsG0480018861.01.T01:CDS 75.0%
! GGGGCCCCACGAGTGGACGG+TGG - Chr4:10735728-10735747 MsG0480018861.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 10734709 10739399 10734709 ID=MsG0480018861.01;Name=MsG0480018861.01
Chr4 mRNA 10734709 10739399 10734709 ID=MsG0480018861.01.T01;Parent=MsG0480018861.01;Name=MsG0480018861.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.33|0.25|0.75|1|1|4|214|559
Chr4 exon 10734709 10735084 10734709 ID=MsG0480018861.01.T01:exon:3645;Parent=MsG0480018861.01.T01
Chr4 exon 10735681 10736448 10735681 ID=MsG0480018861.01.T01:exon:3644;Parent=MsG0480018861.01.T01
Chr4 exon 10738413 10738484 10738413 ID=MsG0480018861.01.T01:exon:3643;Parent=MsG0480018861.01.T01
Chr4 exon 10738722 10739399 10738722 ID=MsG0480018861.01.T01:exon:3642;Parent=MsG0480018861.01.T01
Chr4 CDS 10738722 10739399 10738722 ID=MsG0480018861.01.T01:cds;Parent=MsG0480018861.01.T01
Chr4 CDS 10738413 10738484 10738413 ID=MsG0480018861.01.T01:cds;Parent=MsG0480018861.01.T01
Chr4 CDS 10735681 10736448 10735681 ID=MsG0480018861.01.T01:cds;Parent=MsG0480018861.01.T01
Chr4 CDS 10734923 10735084 10734923 ID=MsG0480018861.01.T01:cds;Parent=MsG0480018861.01.T01
Chr4 three_prime_UTR 10734709 10734922 10734709 ID=MsG0480018861.01.T01:three_prime_utr;Parent=MsG0480018861.01.T01
Gene Sequence

>MsG0480018861.01.T01

ATGGCTTCTGAAGAACCGCAAGAAGAGTCAAAAACGATTCCTCTCAGAATCTTCATAGACAAAGAAAACAACAAAGTTGTCGCTGTAGAATCAACAAAGGACTTCGTTGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCCACAATCATTCGCCTCTTAACCACACACAACAACGATGATCAACAACAAGAAGCCTCAGAATCATTATCATTCCTCGGAAGCATCAAAAACCTCTATGAAAGCGTACAAACCCTCACTCCAAATGATGTTTGGAACCCTGTATGCAAACAAATGTTGTTGAACCCAAAAAATTCATGTGAATCACTATGCAAGAAGCTTTTCTTGAACATTGATGATACTGAATGGTCAAGTAAGTTTTTTGTGTGTGATGCTTGCAACAAGTTTACAACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACTATTAGACAACCTAAGAATTTGGATTCTGAGGGTCAGGGGAATAGTGGTTGTAGTGTTGATGCTTCAAATGGGGTTTTTGTTAAGGACAATGGGTTGTTGTTTTTGGTTTTTGATGATTTGAAGATTGTGCCAAGTTCTTTAGTGACTTCCATGCAGATGTTGATGGAATTGGGGTATTCTGATTTGAGTCAATTAGAGGAAGTTACTCACAACATTGGAAAACAGGAGGCTTGGGAGTTGGGACCTTGGAGTGTGCTCCTCTCAAGGTCTCACATTCGAATCCTCCTTGTGCTAATTTTTATACTGAACCTCCTCAAGTACACCTTAACCTCTCGTGATCCTCTGACAAATACAATTTTGAAAAGCAGCTCCAAGAACAAAGACAACCCGCCAAACCAGTTTGCATCAGCAGTCAGAGTAAAAACTTGCACCCGCGACATTAAAATGGACGTTAAGCTAGTGCGAAGTAAATCTCAGAAAAAGATAATCTGTGCAGAAGCCAGTGAAAACTTTGTTGACTTCATGTTTAGCTTCCTTACAATACCATTAGGGTCCATTGTAAAGGTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAATTTGTACAAAAGTGTAGAGAACTTGGACTCTTCGTTGTGTACAAACTCGCGCTCCGTGTTACTCAATCCTGGTGTCGCACCACACTTTGGTTGTCCAAACCAGCCCCTCAACATTCCTCATGTACAACCACCACTCACTACATATTATTATGGTACAGGAACACCAAAGCAAGAGTATTGTAGTTATGGTTATCAAACGGTAGAATTAAAGATAGAGGGAGGAGTGATTTCTAAGTCGCATGGATTGATTTATAAAGCAAAAGCCTTGACTGAAATGGACCCAAGATCCCCCAACAAATCAAAAAAAAATGTGGTGGGATTTGTGAAGAGGCCGGCATTATATAGTGTAGGAGATGATCTAAAAGTAAAACCACTTTCTGCTAATTCTTGCCTTTCATATTTGAAAGAATTAAACCTTCCCCTTGTTGATCTTGAAGTGAAGGTGATAAGCATTGGTGAAGCTGAGGCTTTGAGCCTCCTTGCAGCTTCCTTGACATCAAAATTTACACTGACTAGTGGACTGGAAGAATTTTTTAATGAGCAAAATCAAGATTCAAATTTGACCTCAAAGTGTGTTCAAACTAGTAGGCTTGATAAAGTTGCAAAGAAGCCTAAACTAGAAGACTGA
Protein sequence

>MsG0480018861.01.T01

MASEEPQEESKTIPLRIFIDKENNKVVAVESTKDFVDTLFSFLSLPLATIIRLLTTHNNDDQQQEASESLSFLGSIKNLYESVQTLTPNDVWNPVCKQMLLNPKNSCESLCKKLFLNIDDTEWSSKFFVCDACNKFTTFQNLDCTCGKPTIRQPKNLDSEGQGNSGCSVDASNGVFVKDNGLLFLVFDDLKIVPSSLVTSMQMLMELGYSDLSQLEEVTHNIGKQEAWELGPWSVLLSRSHIRILLVLIFILNLLKYTLTSRDPLTNTILKSSSKNKDNPPNQFASAVRVKTCTRDIKMDVKLVRSKSQKKIICAEASENFVDFMFSFLTIPLGSIVKVLDGNSFVGCVDNLYKSVENLDSSLCTNSRSVLLNPGVAPHFGCPNQPLNIPHVQPPLTTYYYGTGTPKQEYCSYGYQTVELKIEGGVISKSHGLIYKAKALTEMDPRSPNKSKKNVVGFVKRPALYSVGDDLKVKPLSANSCLSYLKELNLPLVDLEVKVISIGEAEALSLLAASLTSKFTLTSGLEEFFNEQNQDSNLTSKCVQTSRLDKVAKKPKLED*