Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006337.01.T03 | OAY80368.1 | 67.021 | 94 | 20 | 1 | 41 | 123 | 79 | 172 | 1.30E-36 | 135 |
MsG0280006337.01.T01 | OAY80368.1 | 67.021 | 94 | 20 | 1 | 41 | 123 | 79 | 172 | 1.30E-36 | 135 |
MsG0280006337.01.T02 | OAY80368.1 | 67.021 | 94 | 20 | 1 | 41 | 123 | 79 | 172 | 1.30E-36 | 135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006337.01.T01 | P43291 | 65 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.84E-37 | 133 |
MsG0280006337.01.T02 | P43291 | 65 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.84E-37 | 133 |
MsG0280006337.01.T03 | P43291 | 65 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.84E-37 | 133 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006337.01.T01 | A0A452YVC7 | 54.483 | 145 | 39 | 3 | 1 | 124 | 1 | 139 | 3.25e-42 | 147 |
MsG0280006337.01.T02 | A0A452YVC7 | 54.483 | 145 | 39 | 3 | 1 | 124 | 1 | 139 | 3.25e-42 | 147 |
MsG0280006337.01.T03 | A0A452YVC7 | 54.483 | 145 | 39 | 3 | 1 | 124 | 1 | 139 | 3.25e-42 | 147 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048461.01 | MsG0280006337.01 | 0.823607 | 1.264545e-53 | 1.094043e-50 |
MsG0180000024.01 | MsG0280006337.01 | 0.803310 | 3.705350e-49 | 1.855846e-46 |
MsG0180000334.01 | MsG0280006337.01 | 0.822187 | 2.708300e-53 | 2.250557e-50 |
MsG0180000836.01 | MsG0280006337.01 | 0.802561 | 5.291378e-49 | 2.600043e-46 |
MsG0180001173.01 | MsG0280006337.01 | 0.822938 | 1.812138e-53 | 1.538473e-50 |
MsG0180001178.01 | MsG0280006337.01 | 0.811461 | 6.920764e-51 | 4.286636e-48 |
MsG0180001565.01 | MsG0280006337.01 | 0.805469 | 1.314848e-49 | 6.961860e-47 |
MsG0180001566.01 | MsG0280006337.01 | 0.826107 | 3.252784e-54 | 3.021874e-51 |
MsG0180002071.01 | MsG0280006337.01 | 0.823385 | 1.425106e-53 | 1.225100e-50 |
MsG0180004099.01 | MsG0280006337.01 | 0.805880 | 1.078099e-49 | 5.768982e-47 |
MsG0180004357.01 | MsG0280006337.01 | 0.808329 | 3.267797e-50 | 1.863205e-47 |
MsG0180005921.01 | MsG0280006337.01 | 0.825401 | 4.781725e-54 | 4.353900e-51 |
MsG0180006000.01 | MsG0280006337.01 | 0.803134 | 4.029135e-49 | 2.008928e-46 |
MsG0280006337.01 | MsG0280007790.01 | 0.812990 | 3.210780e-51 | 2.071354e-48 |
MsG0280006337.01 | MsG0280008280.01 | 0.806373 | 8.490720e-50 | 4.600816e-47 |
MsG0280006337.01 | MsG0280008285.01 | 0.824063 | 9.889248e-54 | 8.666173e-51 |
MsG0280006337.01 | MsG0280008614.01 | 0.806613 | 7.555754e-50 | 4.119263e-47 |
MsG0280006337.01 | MsG0280008615.01 | 0.823333 | 1.465378e-53 | 1.257958e-50 |
MsG0280006337.01 | MsG0280008909.01 | 0.829097 | 6.229042e-55 | 6.311564e-52 |
MsG0280006337.01 | MsG0280009514.01 | 0.841772 | 3.879914e-58 | 5.760417e-55 |
MsG0280006337.01 | MsG0280009748.01 | 0.804751 | 1.858217e-49 | 9.659409e-47 |
MsG0280006337.01 | MsG0280010491.01 | 0.825588 | 4.319880e-54 | 3.954307e-51 |
MsG0280006337.01 | MsG0280010533.01 | 0.804787 | 1.826430e-49 | 9.502761e-47 |
MsG0280006337.01 | MsG0280010614.01 | 0.810580 | 1.073954e-50 | 6.498171e-48 |
MsG0280006337.01 | MsG0280010698.01 | 0.801785 | 7.641649e-49 | 3.681538e-46 |
MsG0280006337.01 | MsG0280010907.01 | 0.852277 | 5.131938e-61 | 1.066980e-57 |
MsG0280006337.01 | MsG0280011258.01 | 0.828964 | 6.706013e-55 | 6.768071e-52 |
MsG0280006337.01 | MsG0280011282.01 | 0.846978 | 1.545936e-59 | 2.707456e-56 |
MsG0280006337.01 | MsG0280011285.01 | 0.816506 | 5.339657e-52 | 3.790454e-49 |
MsG0280006337.01 | MsG0380011648.01 | 0.807693 | 4.462687e-50 | 2.502070e-47 |
MsG0280006337.01 | MsG0380013476.01 | 0.809063 | 2.276842e-50 | 1.323489e-47 |
MsG0280006337.01 | MsG0380014573.01 | 0.808806 | 2.584820e-50 | 1.492151e-47 |
MsG0280006337.01 | MsG0380014701.01 | 0.808078 | 3.696187e-50 | 2.093414e-47 |
MsG0280006337.01 | MsG0380015332.01 | 0.811085 | 8.350083e-51 | 5.120975e-48 |
MsG0280006337.01 | MsG0380015677.01 | 0.811952 | 5.412581e-51 | 3.396396e-48 |
MsG0280006337.01 | MsG0380016200.01 | 0.808253 | 3.391221e-50 | 1.929721e-47 |
MsG0280006337.01 | MsG0380016247.01 | 0.818361 | 2.040347e-52 | 1.524143e-49 |
MsG0280006337.01 | MsG0380016517.01 | 0.827169 | 1.815248e-54 | 1.738726e-51 |
MsG0280006337.01 | MsG0380016703.01 | 0.826910 | 2.092651e-54 | 1.989439e-51 |
MsG0280006337.01 | MsG0380016994.01 | 0.815004 | 1.154238e-51 | 7.864294e-49 |
MsG0280006337.01 | MsG0380017195.01 | 0.809181 | 2.148271e-50 | 1.252705e-47 |
MsG0280006337.01 | MsG0480018313.01 | 0.813230 | 2.844013e-51 | 1.846633e-48 |
MsG0280006337.01 | MsG0480019276.01 | 0.801305 | 9.584717e-49 | 4.562025e-46 |
MsG0280006337.01 | MsG0480019922.01 | 0.803788 | 2.949317e-49 | 1.495525e-46 |
MsG0280006337.01 | MsG0480020465.01 | 0.803449 | 3.467893e-49 | 1.743189e-46 |
MsG0280006337.01 | MsG0480020495.01 | 0.800425 | 1.450147e-48 | 6.750252e-46 |
MsG0280006337.01 | MsG0480020739.01 | 0.807152 | 5.811560e-50 | 3.212953e-47 |
MsG0280006337.01 | MsG0480020780.01 | 0.809411 | 1.917539e-50 | 1.125088e-47 |
MsG0280006337.01 | MsG0480021778.01 | 0.802892 | 4.520676e-49 | 2.240251e-46 |
MsG0280006337.01 | MsG0480021784.01 | 0.808452 | 3.076277e-50 | 1.759655e-47 |
MsG0280006337.01 | MsG0480022717.01 | 0.808615 | 2.838390e-50 | 1.630356e-47 |
MsG0280006337.01 | MsG0480022719.01 | 0.800010 | 1.761554e-48 | 8.113415e-46 |
MsG0280006337.01 | MsG0480022738.01 | 0.808764 | 2.638277e-50 | 1.521354e-47 |
MsG0280006337.01 | MsG0480023130.01 | 0.806967 | 6.360539e-50 | 3.499548e-47 |
MsG0280006337.01 | MsG0480023541.01 | 0.824386 | 8.300482e-54 | 7.340896e-51 |
MsG0280006337.01 | MsG0480023718.01 | 0.841093 | 5.855722e-58 | 8.511248e-55 |
MsG0280006337.01 | MsG0580024035.01 | 0.808228 | 3.434234e-50 | 1.952825e-47 |
MsG0280006337.01 | MsG0580024157.01 | 0.804693 | 1.910699e-49 | 9.916882e-47 |
MsG0280006337.01 | MsG0580024506.01 | 0.801125 | 1.043330e-48 | 4.943563e-46 |
MsG0280006337.01 | MsG0580024960.01 | 0.807045 | 6.123119e-50 | 3.375770e-47 |
MsG0280006337.01 | MsG0580025555.01 | 0.831812 | 1.349962e-55 | 1.481472e-52 |
MsG0280006337.01 | MsG0580025758.01 | 0.800661 | 1.298161e-48 | 6.078921e-46 |
MsG0280006337.01 | MsG0580025900.01 | 0.813094 | 3.045704e-51 | 1.970295e-48 |
MsG0280006337.01 | MsG0580026075.01 | 0.814539 | 1.463158e-51 | 9.844655e-49 |
MsG0280006337.01 | MsG0580027208.01 | 0.811459 | 6.928755e-51 | 4.291378e-48 |
MsG0280006337.01 | MsG0580027745.01 | 0.816245 | 6.108710e-52 | 4.305848e-49 |
MsG0280006337.01 | MsG0580028517.01 | 0.800900 | 1.160296e-48 | 5.466614e-46 |
MsG0280006337.01 | MsG0580029640.01 | 0.821864 | 3.219047e-53 | 2.650639e-50 |
MsG0280006337.01 | MsG0680030447.01 | 0.831756 | 1.393433e-55 | 1.526655e-52 |
MsG0280006337.01 | MsG0680030672.01 | 0.819749 | 9.863310e-53 | 7.656353e-50 |
MsG0280006337.01 | MsG0680031549.01 | 0.826739 | 2.299394e-54 | 2.174944e-51 |
MsG0280006337.01 | MsG0680034842.01 | 0.801538 | 8.587236e-49 | 4.111337e-46 |
MsG0280006337.01 | MsG0680035346.01 | 0.836674 | 8.148731e-57 | 1.034192e-53 |
MsG0280006337.01 | MsG0680035475.01 | 0.825360 | 4.891270e-54 | 4.448258e-51 |
MsG0280006337.01 | MsG0780036752.01 | 0.805060 | 1.601774e-49 | 8.392459e-47 |
MsG0280006337.01 | MsG0780037144.01 | 0.815760 | 7.836101e-52 | 5.450855e-49 |
MsG0280006337.01 | MsG0780037146.01 | 0.828063 | 1.107228e-54 | 1.088594e-51 |
MsG0280006337.01 | MsG0780038386.01 | 0.835156 | 1.977021e-56 | 2.397140e-53 |
MsG0280006337.01 | MsG0780038401.01 | 0.800969 | 1.122884e-48 | 5.299681e-46 |
MsG0280006337.01 | MsG0780038424.01 | 0.806561 | 7.749375e-50 | 4.219417e-47 |
MsG0280006337.01 | MsG0780038602.01 | 0.823461 | 1.368304e-53 | 1.178854e-50 |
MsG0280006337.01 | MsG0780038603.01 | 0.821962 | 3.054693e-53 | 2.522146e-50 |
MsG0280006337.01 | MsG0780038691.01 | 0.809311 | 2.014970e-50 | 1.179044e-47 |
MsG0280006337.01 | MsG0780039059.01 | 0.814391 | 1.577763e-51 | 1.057395e-48 |
MsG0280006337.01 | MsG0780039252.01 | 0.803942 | 2.740363e-49 | 1.395128e-46 |
MsG0280006337.01 | MsG0780039655.01 | 0.836376 | 9.701551e-57 | 1.220391e-53 |
MsG0280006337.01 | MsG0780039712.01 | 0.810888 | 9.215548e-51 | 5.622389e-48 |
MsG0280006337.01 | MsG0780039866.01 | 0.809995 | 1.436527e-50 | 8.559565e-48 |
MsG0280006337.01 | MsG0780040047.01 | 0.802122 | 6.517838e-49 | 3.167069e-46 |
MsG0280006337.01 | MsG0780041787.01 | 0.806057 | 9.893097e-50 | 5.317966e-47 |
MsG0280006337.01 | MsG0880041986.01 | 0.801366 | 9.316590e-49 | 4.441258e-46 |
MsG0280006337.01 | MsG0880042547.01 | 0.826802 | 2.221630e-54 | 2.105177e-51 |
MsG0280006337.01 | MsG0880042552.01 | 0.827428 | 1.573151e-54 | 1.518327e-51 |
MsG0280006337.01 | MsG0880043480.01 | 0.810211 | 1.290070e-50 | 7.729745e-48 |
MsG0280006337.01 | MsG0880043992.01 | 0.811294 | 7.524172e-51 | 4.639552e-48 |
MsG0280006337.01 | MsG0880043994.01 | 0.820379 | 7.076990e-53 | 5.590841e-50 |
MsG0280006337.01 | MsG0880044075.01 | 0.808148 | 3.570543e-50 | 2.026107e-47 |
MsG0280006337.01 | MsG0880044782.01 | 0.803381 | 3.581315e-49 | 1.797013e-46 |
MsG0280006337.01 | MsG0880045393.01 | 0.800799 | 1.216352e-48 | 5.715667e-46 |
MsG0280006337.01 | MsG0880045639.01 | 0.805940 | 1.047053e-49 | 5.611582e-47 |
MsG0280006337.01 | MsG0880046027.01 | 0.808610 | 2.845431e-50 | 1.634186e-47 |
MsG0280006337.01 | MsG0880046762.01 | 0.826672 | 2.385320e-54 | 2.251981e-51 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006337.01.T03 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 42 | 141 | 1.99e-40 | 135 |
MsG0280006337.01.T03 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 118 | 217 | 4.86e-40 | 137 |
MsG0280006337.01.T03 | MTR_3g097320 | 63.810 | 105 | 17 | 2 | 41 | 124 | 113 | 217 | 1.04e-38 | 133 |
MsG0280006337.01.T03 | MTR_8g095330 | 66.000 | 100 | 13 | 2 | 46 | 124 | 119 | 218 | 1.50e-38 | 133 |
MsG0280006337.01.T03 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 42 | 141 | 5.36e-37 | 127 |
MsG0280006337.01.T03 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 137 | 236 | 1.91e-36 | 127 |
MsG0280006337.01.T03 | MTR_1g034030 | 62.000 | 100 | 17 | 2 | 46 | 124 | 138 | 237 | 2.11e-36 | 127 |
MsG0280006337.01.T03 | MTR_1g034030 | 62.626 | 99 | 16 | 2 | 46 | 123 | 138 | 236 | 6.46e-36 | 125 |
MsG0280006337.01.T03 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 42 | 141 | 9.49e-36 | 123 |
MsG0280006337.01.T03 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 118 | 217 | 3.25e-35 | 124 |
MsG0280006337.01.T03 | MTR_4g099240 | 58.000 | 100 | 21 | 2 | 46 | 124 | 119 | 218 | 8.85e-35 | 122 |
MsG0280006337.01.T03 | MTR_8g079560 | 58.000 | 100 | 21 | 2 | 46 | 124 | 137 | 236 | 1.25e-33 | 120 |
MsG0280006337.01.T03 | MTR_3g086940 | 60.000 | 100 | 19 | 2 | 46 | 124 | 119 | 218 | 2.67e-33 | 119 |
MsG0280006337.01.T03 | MTR_5g013550 | 58.000 | 100 | 21 | 2 | 46 | 124 | 120 | 219 | 4.94e-33 | 118 |
MsG0280006337.01.T03 | MTR_5g064540 | 60.204 | 98 | 18 | 2 | 47 | 123 | 119 | 216 | 5.49e-33 | 116 |
MsG0280006337.01.T03 | MTR_5g018050 | 59.184 | 98 | 19 | 2 | 46 | 122 | 132 | 229 | 8.01e-33 | 115 |
MsG0280006337.01.T03 | MTR_5g064540 | 59.596 | 99 | 19 | 2 | 47 | 124 | 119 | 217 | 3.99e-32 | 115 |
MsG0280006337.01.T03 | MTR_5g018050 | 57.576 | 99 | 21 | 2 | 46 | 123 | 99 | 197 | 1.24e-31 | 114 |
MsG0280006337.01.T03 | MTR_5g018050 | 57.000 | 100 | 22 | 2 | 46 | 124 | 132 | 231 | 1.34e-31 | 115 |
MsG0280006337.01.T03 | MTR_4g099220 | 51.000 | 100 | 28 | 2 | 46 | 124 | 125 | 224 | 3.81e-26 | 100 |
MsG0280006337.01.T03 | MTR_8g088740 | 50.685 | 73 | 10 | 4 | 47 | 97 | 119 | 187 | 6.34e-12 | 60.1 |
MsG0280006337.01.T01 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 42 | 141 | 1.99e-40 | 135 |
MsG0280006337.01.T01 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 118 | 217 | 4.86e-40 | 137 |
MsG0280006337.01.T01 | MTR_3g097320 | 63.810 | 105 | 17 | 2 | 41 | 124 | 113 | 217 | 1.04e-38 | 133 |
MsG0280006337.01.T01 | MTR_8g095330 | 66.000 | 100 | 13 | 2 | 46 | 124 | 119 | 218 | 1.50e-38 | 133 |
MsG0280006337.01.T01 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 42 | 141 | 5.36e-37 | 127 |
MsG0280006337.01.T01 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 137 | 236 | 1.91e-36 | 127 |
MsG0280006337.01.T01 | MTR_1g034030 | 62.000 | 100 | 17 | 2 | 46 | 124 | 138 | 237 | 2.11e-36 | 127 |
MsG0280006337.01.T01 | MTR_1g034030 | 62.626 | 99 | 16 | 2 | 46 | 123 | 138 | 236 | 6.46e-36 | 125 |
MsG0280006337.01.T01 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 42 | 141 | 9.49e-36 | 123 |
MsG0280006337.01.T01 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 118 | 217 | 3.25e-35 | 124 |
MsG0280006337.01.T01 | MTR_4g099240 | 58.000 | 100 | 21 | 2 | 46 | 124 | 119 | 218 | 8.85e-35 | 122 |
MsG0280006337.01.T01 | MTR_8g079560 | 58.000 | 100 | 21 | 2 | 46 | 124 | 137 | 236 | 1.25e-33 | 120 |
MsG0280006337.01.T01 | MTR_3g086940 | 60.000 | 100 | 19 | 2 | 46 | 124 | 119 | 218 | 2.67e-33 | 119 |
MsG0280006337.01.T01 | MTR_5g013550 | 58.000 | 100 | 21 | 2 | 46 | 124 | 120 | 219 | 4.94e-33 | 118 |
MsG0280006337.01.T01 | MTR_5g064540 | 60.204 | 98 | 18 | 2 | 47 | 123 | 119 | 216 | 5.49e-33 | 116 |
MsG0280006337.01.T01 | MTR_5g018050 | 59.184 | 98 | 19 | 2 | 46 | 122 | 132 | 229 | 8.01e-33 | 115 |
MsG0280006337.01.T01 | MTR_5g064540 | 59.596 | 99 | 19 | 2 | 47 | 124 | 119 | 217 | 3.99e-32 | 115 |
MsG0280006337.01.T01 | MTR_5g018050 | 57.576 | 99 | 21 | 2 | 46 | 123 | 99 | 197 | 1.24e-31 | 114 |
MsG0280006337.01.T01 | MTR_5g018050 | 57.000 | 100 | 22 | 2 | 46 | 124 | 132 | 231 | 1.34e-31 | 115 |
MsG0280006337.01.T01 | MTR_4g099220 | 51.000 | 100 | 28 | 2 | 46 | 124 | 125 | 224 | 3.81e-26 | 100 |
MsG0280006337.01.T01 | MTR_8g088740 | 50.685 | 73 | 10 | 4 | 47 | 97 | 119 | 187 | 6.34e-12 | 60.1 |
MsG0280006337.01.T02 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 42 | 141 | 1.99e-40 | 135 |
MsG0280006337.01.T02 | MTR_2g006330 | 68.000 | 100 | 11 | 2 | 46 | 124 | 118 | 217 | 4.86e-40 | 137 |
MsG0280006337.01.T02 | MTR_3g097320 | 63.810 | 105 | 17 | 2 | 41 | 124 | 113 | 217 | 1.04e-38 | 133 |
MsG0280006337.01.T02 | MTR_8g095330 | 66.000 | 100 | 13 | 2 | 46 | 124 | 119 | 218 | 1.50e-38 | 133 |
MsG0280006337.01.T02 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 42 | 141 | 5.36e-37 | 127 |
MsG0280006337.01.T02 | MTR_4g086855 | 62.000 | 100 | 17 | 2 | 46 | 124 | 137 | 236 | 1.91e-36 | 127 |
MsG0280006337.01.T02 | MTR_1g034030 | 62.000 | 100 | 17 | 2 | 46 | 124 | 138 | 237 | 2.11e-36 | 127 |
MsG0280006337.01.T02 | MTR_1g034030 | 62.626 | 99 | 16 | 2 | 46 | 123 | 138 | 236 | 6.46e-36 | 125 |
MsG0280006337.01.T02 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 42 | 141 | 9.49e-36 | 123 |
MsG0280006337.01.T02 | MTR_8g089975 | 61.000 | 100 | 18 | 2 | 46 | 124 | 118 | 217 | 3.25e-35 | 124 |
MsG0280006337.01.T02 | MTR_4g099240 | 58.000 | 100 | 21 | 2 | 46 | 124 | 119 | 218 | 8.85e-35 | 122 |
MsG0280006337.01.T02 | MTR_8g079560 | 58.000 | 100 | 21 | 2 | 46 | 124 | 137 | 236 | 1.25e-33 | 120 |
MsG0280006337.01.T02 | MTR_3g086940 | 60.000 | 100 | 19 | 2 | 46 | 124 | 119 | 218 | 2.67e-33 | 119 |
MsG0280006337.01.T02 | MTR_5g013550 | 58.000 | 100 | 21 | 2 | 46 | 124 | 120 | 219 | 4.94e-33 | 118 |
MsG0280006337.01.T02 | MTR_5g064540 | 60.204 | 98 | 18 | 2 | 47 | 123 | 119 | 216 | 5.49e-33 | 116 |
MsG0280006337.01.T02 | MTR_5g018050 | 59.184 | 98 | 19 | 2 | 46 | 122 | 132 | 229 | 8.01e-33 | 115 |
MsG0280006337.01.T02 | MTR_5g064540 | 59.596 | 99 | 19 | 2 | 47 | 124 | 119 | 217 | 3.99e-32 | 115 |
MsG0280006337.01.T02 | MTR_5g018050 | 57.576 | 99 | 21 | 2 | 46 | 123 | 99 | 197 | 1.24e-31 | 114 |
MsG0280006337.01.T02 | MTR_5g018050 | 57.000 | 100 | 22 | 2 | 46 | 124 | 132 | 231 | 1.34e-31 | 115 |
MsG0280006337.01.T02 | MTR_4g099220 | 51.000 | 100 | 28 | 2 | 46 | 124 | 125 | 224 | 3.81e-26 | 100 |
MsG0280006337.01.T02 | MTR_8g088740 | 50.685 | 73 | 10 | 4 | 47 | 97 | 119 | 187 | 6.34e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006337.01.T03 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.87e-38 | 133 |
MsG0280006337.01.T03 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 126 | 225 | 2.13e-38 | 133 |
MsG0280006337.01.T03 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T03 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T03 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.22e-36 | 127 |
MsG0280006337.01.T03 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.96e-36 | 127 |
MsG0280006337.01.T03 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 42 | 141 | 5.75e-36 | 124 |
MsG0280006337.01.T03 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 118 | 217 | 1.79e-35 | 125 |
MsG0280006337.01.T03 | AT5G63650 | 62.000 | 100 | 17 | 2 | 46 | 124 | 118 | 217 | 3.95e-35 | 124 |
MsG0280006337.01.T03 | AT3G50500 | 61.000 | 100 | 18 | 2 | 46 | 124 | 137 | 236 | 9.32e-35 | 123 |
MsG0280006337.01.T03 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T03 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T03 | AT2G23030 | 58.333 | 108 | 24 | 2 | 41 | 127 | 113 | 220 | 1.42e-34 | 122 |
MsG0280006337.01.T03 | AT3G50500 | 56.364 | 110 | 14 | 2 | 46 | 124 | 137 | 243 | 5.78e-34 | 121 |
MsG0280006337.01.T03 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T03 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T03 | AT4G40010 | 59.000 | 100 | 20 | 2 | 46 | 124 | 118 | 217 | 4.67e-32 | 116 |
MsG0280006337.01.T01 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.87e-38 | 133 |
MsG0280006337.01.T01 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 126 | 225 | 2.13e-38 | 133 |
MsG0280006337.01.T01 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T01 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T01 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.22e-36 | 127 |
MsG0280006337.01.T01 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.96e-36 | 127 |
MsG0280006337.01.T01 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 42 | 141 | 5.75e-36 | 124 |
MsG0280006337.01.T01 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 118 | 217 | 1.79e-35 | 125 |
MsG0280006337.01.T01 | AT5G63650 | 62.000 | 100 | 17 | 2 | 46 | 124 | 118 | 217 | 3.95e-35 | 124 |
MsG0280006337.01.T01 | AT3G50500 | 61.000 | 100 | 18 | 2 | 46 | 124 | 137 | 236 | 9.32e-35 | 123 |
MsG0280006337.01.T01 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T01 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T01 | AT2G23030 | 58.333 | 108 | 24 | 2 | 41 | 127 | 113 | 220 | 1.42e-34 | 122 |
MsG0280006337.01.T01 | AT3G50500 | 56.364 | 110 | 14 | 2 | 46 | 124 | 137 | 243 | 5.78e-34 | 121 |
MsG0280006337.01.T01 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T01 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T01 | AT4G40010 | 59.000 | 100 | 20 | 2 | 46 | 124 | 118 | 217 | 4.67e-32 | 116 |
MsG0280006337.01.T02 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 118 | 217 | 1.87e-38 | 133 |
MsG0280006337.01.T02 | AT1G10940 | 65.000 | 100 | 14 | 2 | 46 | 124 | 126 | 225 | 2.13e-38 | 133 |
MsG0280006337.01.T02 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T02 | AT1G60940 | 66.000 | 100 | 13 | 2 | 46 | 124 | 118 | 217 | 7.88e-38 | 131 |
MsG0280006337.01.T02 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.22e-36 | 127 |
MsG0280006337.01.T02 | AT4G33950 | 62.000 | 100 | 17 | 2 | 46 | 124 | 135 | 234 | 3.96e-36 | 127 |
MsG0280006337.01.T02 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 42 | 141 | 5.75e-36 | 124 |
MsG0280006337.01.T02 | AT5G08590 | 63.000 | 100 | 16 | 2 | 46 | 124 | 118 | 217 | 1.79e-35 | 125 |
MsG0280006337.01.T02 | AT5G63650 | 62.000 | 100 | 17 | 2 | 46 | 124 | 118 | 217 | 3.95e-35 | 124 |
MsG0280006337.01.T02 | AT3G50500 | 61.000 | 100 | 18 | 2 | 46 | 124 | 137 | 236 | 9.32e-35 | 123 |
MsG0280006337.01.T02 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T02 | AT5G66880 | 60.000 | 100 | 19 | 2 | 46 | 124 | 136 | 235 | 1.01e-34 | 123 |
MsG0280006337.01.T02 | AT2G23030 | 58.333 | 108 | 24 | 2 | 41 | 127 | 113 | 220 | 1.42e-34 | 122 |
MsG0280006337.01.T02 | AT3G50500 | 56.364 | 110 | 14 | 2 | 46 | 124 | 137 | 243 | 5.78e-34 | 121 |
MsG0280006337.01.T02 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T02 | AT1G78290 | 60.000 | 100 | 19 | 2 | 46 | 124 | 118 | 217 | 7.04e-34 | 120 |
MsG0280006337.01.T02 | AT4G40010 | 59.000 | 100 | 20 | 2 | 46 | 124 | 118 | 217 | 4.67e-32 | 116 |
Find 30 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGTGATACGATTAATTATT+TGG | 0.124989 | 2:-613632 | None:intergenic |
CAAGCTGTTTGGTATCTTTC+TGG | 0.145548 | 2:-613803 | None:intergenic |
GATATAGGATCTGGAAATTT+TGG | 0.193667 | 2:+613762 | MsG0280006337.01.T01:five_prime_UTR |
GAACAGAAAGAAAGATTAAT+TGG | 0.211637 | 2:-613597 | None:intergenic |
GACCTCGTTCTATATATTCA+TGG | 0.358243 | 2:-613829 | None:intergenic |
GGAGAAGTACGAGGTGGTTA+AGG | 0.368586 | 2:+613740 | MsG0280006337.01.T01:five_prime_UTR |
GTGGTTATGTTATGTTTAGA+AGG | 0.399058 | 2:-613569 | None:intergenic |
ATTCATGGCAACAAGCTGTT+TGG | 0.418937 | 2:-613814 | None:intergenic |
TACGATTAATTATTTGGAAA+GGG | 0.429561 | 2:-613626 | None:intergenic |
TACGAGGTGGTTAAGGATAT+AGG | 0.447227 | 2:+613747 | MsG0280006337.01.T01:five_prime_UTR |
GTGGTTAAGGATATAGGATC+TGG | 0.461848 | 2:+613753 | MsG0280006337.01.T01:five_prime_UTR |
ATACGATTAATTATTTGGAA+AGG | 0.485407 | 2:-613627 | None:intergenic |
TTAATTATTTGGAAAGGGAA+AGG | 0.493230 | 2:-613621 | None:intergenic |
TGGTTATGTTATGTTTAGAA+GGG | 0.507394 | 2:-613568 | None:intergenic |
AATGATAGTGAGAAAAGGAA+TGG | 0.508510 | 2:+613444 | None:intergenic |
AAAGAAAGATTAATTGGAAG+CGG | 0.547454 | 2:-613591 | None:intergenic |
GAAAGATTAATTGGAAGCGG+TGG | 0.549759 | 2:-613588 | None:intergenic |
ACCTTTCACTATTTCAACGC+CGG | 0.572715 | 2:-613714 | None:intergenic |
TCATTTCTCAGAGATCGATC+CGG | 0.611454 | 2:+613695 | MsG0280006337.01.T01:intron |
CTGAGAAATGATAATAACAA+AGG | 0.614352 | 2:-613683 | None:intergenic |
GTTGAAATAGTGAAAGGTGA+TGG | 0.617483 | 2:+613719 | MsG0280006337.01.T01:five_prime_UTR |
AGAAATGATAATAACAAAGG+TGG | 0.620056 | 2:-613680 | None:intergenic |
TCCGGCGTTGAAATAGTGAA+AGG | 0.634495 | 2:+613713 | MsG0280006337.01.T01:five_prime_UTR |
AAAGGTGATGGAGAAGTACG+AGG | 0.647067 | 2:+613731 | MsG0280006337.01.T01:five_prime_UTR |
ATATATAGAACGAGGTCACA+AGG | 0.648680 | 2:+613835 | MsG0280006337.01.T01:five_prime_UTR |
ATTATGATTATGATGATGAG+AGG | 0.663754 | 2:+613481 | MsG0280006337.01.T01:five_prime_UTR |
ATGTTTAGAAGGGAAGACAA+AGG | 0.681358 | 2:-613558 | None:intergenic |
GATGAGAGGCGTGAAAGTGA+AGG | 0.685369 | 2:+613495 | MsG0280006337.01.T01:five_prime_UTR |
TGCCATGAATATATAGAACG+AGG | 0.698308 | 2:+613827 | MsG0280006337.01.T01:five_prime_UTR |
GGTGATGGAGAAGTACGAGG+TGG | 0.698825 | 2:+613734 | MsG0280006337.01.T01:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTAATAT+AGG | + | Chr2:614298-614317 | MsG0280006337.01.T01:intron | 0.0% |
!! | AATAAGATTAAACATTTGTT+GGG | + | Chr2:614907-614926 | MsG0280006337.01.T01:intron | 15.0% |
!! | TCTGACATTTATAAAAATAT+TGG | - | Chr2:615252-615271 | None:intergenic | 15.0% |
!!! | AATAATTTACATAAAGCATT+TGG | - | Chr2:614720-614739 | None:intergenic | 15.0% |
!!! | AATATTTTTATAAATGTCAG+AGG | + | Chr2:615251-615270 | MsG0280006337.01.T01:intron | 15.0% |
!!! | ATTTTTTTTATAGATTACCA+TGG | - | Chr2:614499-614518 | None:intergenic | 15.0% |
!! | AAATAATTCAGTTTCTTTCA+TGG | + | Chr2:614884-614903 | MsG0280006337.01.T01:intron | 20.0% |
!! | ATAAGAACGCATAAATTAAA+AGG | - | Chr2:614388-614407 | None:intergenic | 20.0% |
!! | ATACGATTAATTATTTGGAA+AGG | - | Chr2:613630-613649 | None:intergenic | 20.0% |
!! | ATTTAACTGACATAAGAATA+TGG | + | Chr2:615087-615106 | MsG0280006337.01.T01:intron | 20.0% |
!! | GAATAAGATTAAACATTTGT+TGG | + | Chr2:614906-614925 | MsG0280006337.01.T01:intron | 20.0% |
!! | GATCATTAACATAAAAAACA+CGG | - | Chr2:615328-615347 | None:intergenic | 20.0% |
!! | TACGATTAATTATTTGGAAA+GGG | - | Chr2:613629-613648 | None:intergenic | 20.0% |
!! | TTTATATCAATTCCTTTATG+TGG | - | Chr2:615215-615234 | None:intergenic | 20.0% |
! | AAAGAAAGATTAATTGGAAG+CGG | - | Chr2:613594-613613 | None:intergenic | 25.0% |
! | AGAAATGATAATAACAAAGG+TGG | - | Chr2:613683-613702 | None:intergenic | 25.0% |
! | AGAATGAGCATTATATTTGA+CGG | + | Chr2:615050-615069 | MsG0280006337.01.T01:intron | 25.0% |
! | ATTCTTATGTCAGTTAAATG+TGG | - | Chr2:615086-615105 | None:intergenic | 25.0% |
! | CTGAGAAATGATAATAACAA+AGG | - | Chr2:613686-613705 | None:intergenic | 25.0% |
! | GAACAGAAAGAAAGATTAAT+TGG | - | Chr2:613600-613619 | None:intergenic | 25.0% |
! | GTGTGATACGATTAATTATT+TGG | - | Chr2:613635-613654 | None:intergenic | 25.0% |
! | TGGTTATGTTATGTTTAGAA+GGG | - | Chr2:613571-613590 | None:intergenic | 25.0% |
! | TGTATGTATGTTTGAATTTG+CGG | + | Chr2:614123-614142 | MsG0280006337.01.T01:intron | 25.0% |
! | TGTCAAGAAAATTACATTGA+TGG | - | Chr2:615630-615649 | None:intergenic | 25.0% |
! | TTAATTATTTGGAAAGGGAA+AGG | - | Chr2:613624-613643 | None:intergenic | 25.0% |
!! | ATGGATGTTAGCAATTTTTA+TGG | + | Chr2:614974-614993 | MsG0280006337.01.T01:intron | 25.0% |
!! | ATGGTTTTCCTGAAATTTTT+GGG | - | Chr2:615611-615630 | None:intergenic | 25.0% |
!! | ATTATGATTATGATGATGAG+AGG | + | Chr2:613481-613500 | MsG0280006337.01.T01:five_prime_UTR | 25.0% |
!! | TGGATGTTAGCAATTTTTAT+GGG | + | Chr2:614975-614994 | MsG0280006337.01.T01:intron | 25.0% |
!!! | GTTATTCTAAGGTTTAGTTA+TGG | + | Chr2:614680-614699 | MsG0280006337.01.T01:intron | 25.0% |
AAGATGATCCCAAAAATTTC+AGG | + | Chr2:615600-615619 | MsG0280006337.01.T01:CDS | 30.0% | |
ATAACTATACCAAGATGTGT+AGG | - | Chr2:614197-614216 | None:intergenic | 30.0% | |
GTGGTTATGTTATGTTTAGA+AGG | - | Chr2:613572-613591 | None:intergenic | 30.0% | |
TAAAAAACACGGAAAACTCA+AGG | - | Chr2:615317-615336 | None:intergenic | 30.0% | |
TAATATTATTCGCTTCAAGG+AGG | + | Chr2:614024-614043 | MsG0280006337.01.T01:five_prime_UTR | 30.0% | |
TACACATCTTGGTATAGTTA+TGG | + | Chr2:614196-614215 | MsG0280006337.01.T01:five_prime_UTR | 30.0% | |
TCCTAATATTATTCGCTTCA+AGG | + | Chr2:614021-614040 | MsG0280006337.01.T01:five_prime_UTR | 30.0% | |
TCCTTGAAGCGAATAATATT+AGG | - | Chr2:614025-614044 | None:intergenic | 30.0% | |
! | AGATTAAACATTTGTTGGGA+TGG | + | Chr2:614911-614930 | MsG0280006337.01.T01:intron | 30.0% |
! | GATATAGGATCTGGAAATTT+TGG | + | Chr2:613762-613781 | MsG0280006337.01.T01:five_prime_UTR | 30.0% |
! | GATGGTTTTCCTGAAATTTT+TGG | - | Chr2:615612-615631 | None:intergenic | 30.0% |
! | TGATGTTAGTATTTTCTTCC+AGG | + | Chr2:614347-614366 | MsG0280006337.01.T01:intron | 30.0% |
!!! | GTTCTATTCTGTTTCTGTTT+TGG | + | Chr2:615451-615470 | MsG0280006337.01.T01:intron | 30.0% |
!!! | GTTCTTCTATTTTGTTTCTG+CGG | + | Chr2:615357-615376 | MsG0280006337.01.T01:intron | 30.0% |
!!! | TCTTATTTTGCCTCTATCTT+GGG | + | Chr2:614542-614561 | MsG0280006337.01.T01:intron | 30.0% |
!!! | TGAAATTTTTGGGATCATCT+TGG | - | Chr2:615601-615620 | None:intergenic | 30.0% |
!!! | TTCTTATTTTGCCTCTATCT+TGG | + | Chr2:614541-614560 | MsG0280006337.01.T01:intron | 30.0% |
!!! | TTGCGATTTTGGTTATTCTA+AGG | + | Chr2:614669-614688 | MsG0280006337.01.T01:CDS | 30.0% |
ACTCTTTATGTAATGCTGGT+GGG | + | Chr2:615557-615576 | MsG0280006337.01.T01:CDS | 35.0% | |
AGATTGATGAGAATGTTGCA+AGG | + | Chr2:613969-613988 | MsG0280006337.01.T01:intron | 35.0% | |
AGTGACTCTTTATGTAATGC+TGG | + | Chr2:615553-615572 | MsG0280006337.01.T01:CDS | 35.0% | |
ATAGTTATGGAATATGCTGC+TGG | + | Chr2:614209-614228 | MsG0280006337.01.T01:intron | 35.0% | |
ATATATAGAACGAGGTCACA+AGG | + | Chr2:613835-613854 | MsG0280006337.01.T01:five_prime_UTR | 35.0% | |
ATGTATGTTTGAATTTGCGG+TGG | + | Chr2:614126-614145 | MsG0280006337.01.T01:intron | 35.0% | |
ATGTTTAGAAGGGAAGACAA+AGG | - | Chr2:613561-613580 | None:intergenic | 35.0% | |
CTTTCACGTAGAGAATATGA+CGG | + | Chr2:614855-614874 | MsG0280006337.01.T01:intron | 35.0% | |
GAAATATAACCCCAAGATAG+AGG | - | Chr2:614555-614574 | None:intergenic | 35.0% | |
GACCTCGTTCTATATATTCA+TGG | - | Chr2:613832-613851 | None:intergenic | 35.0% | |
GATTGATGAGAATGTTGCAA+GGG | + | Chr2:613970-613989 | MsG0280006337.01.T01:intron | 35.0% | |
GTTGAAATAGTGAAAGGTGA+TGG | + | Chr2:613719-613738 | MsG0280006337.01.T01:five_prime_UTR | 35.0% | |
TAAACACTTGAGCCACATAA+AGG | + | Chr2:615200-615219 | MsG0280006337.01.T01:intron | 35.0% | |
TGCCATGAATATATAGAACG+AGG | + | Chr2:613827-613846 | MsG0280006337.01.T01:five_prime_UTR | 35.0% | |
TGTATGTTTGAATTTGCGGT+GGG | + | Chr2:614127-614146 | MsG0280006337.01.T01:intron | 35.0% | |
TTGCAACATTCTCATCAATC+TGG | - | Chr2:613970-613989 | None:intergenic | 35.0% | |
TTTCACGTAGAGAATATGAC+GGG | + | Chr2:614856-614875 | MsG0280006337.01.T01:intron | 35.0% | |
! | CATTTGAAGTATTTCGTCCT+TGG | + | Chr2:615277-615296 | MsG0280006337.01.T01:intron | 35.0% |
!! | AAGATTCGTTGATTTGTTGC+AGG | + | Chr2:614425-614444 | MsG0280006337.01.T01:intron | 35.0% |
!! | CAGATACTTTTGTTTGTCAG+AGG | + | Chr2:614941-614960 | MsG0280006337.01.T01:intron | 35.0% |
!! | TGTTTTTGTGTCCTTTCAGT+TGG | + | Chr2:615511-615530 | MsG0280006337.01.T01:CDS | 35.0% |
!!! | CTTATTTTGCCTCTATCTTG+GGG | + | Chr2:614543-614562 | MsG0280006337.01.T01:intron | 35.0% |
ACCTTTCACTATTTCAACGC+CGG | - | Chr2:613717-613736 | None:intergenic | 40.0% | |
AGTTAGCTACTGTCATTCCA+TGG | + | Chr2:614479-614498 | MsG0280006337.01.T01:CDS | 40.0% | |
ATCTTCCAGCAGAGCAAATT+CGG | - | Chr2:614250-614269 | None:intergenic | 40.0% | |
ATTCATGGCAACAAGCTGTT+TGG | - | Chr2:613817-613836 | None:intergenic | 40.0% | |
CAAGCTGTTTGGTATCTTTC+TGG | - | Chr2:613806-613825 | None:intergenic | 40.0% | |
CCAGACTACACAATTCGTAA+TGG | - | Chr2:615122-615141 | None:intergenic | 40.0% | |
CCATTACGAATTGTGTAGTC+TGG | + | Chr2:615119-615138 | MsG0280006337.01.T01:intron | 40.0% | |
GAAAGATTAATTGGAAGCGG+TGG | - | Chr2:613591-613610 | None:intergenic | 40.0% | |
GACTCTTTATGTAATGCTGG+TGG | + | Chr2:615556-615575 | MsG0280006337.01.T01:CDS | 40.0% | |
GATCATCTTGGTCCTCAAAT+GGG | - | Chr2:615589-615608 | None:intergenic | 40.0% | |
GTGGTTAAGGATATAGGATC+TGG | + | Chr2:613753-613772 | MsG0280006337.01.T01:five_prime_UTR | 40.0% | |
TACGAGGTGGTTAAGGATAT+AGG | + | Chr2:613747-613766 | MsG0280006337.01.T01:five_prime_UTR | 40.0% | |
TAGGATGACGAAGACTTCTA+TGG | - | Chr2:614006-614025 | None:intergenic | 40.0% | |
TCAACGAATCTTTCAGAACG+TGG | - | Chr2:614417-614436 | None:intergenic | 40.0% | |
TCATTTCTCAGAGATCGATC+CGG | + | Chr2:613695-613714 | MsG0280006337.01.T01:intron | 40.0% | |
TGTCAGAGGAAACTCAGAAA+TGG | + | Chr2:614955-614974 | MsG0280006337.01.T01:intron | 40.0% | |
! | AAATCGCAAATTTTGAGCCG+TGG | - | Chr2:614658-614677 | None:intergenic | 40.0% |
! | AATCGCAAATTTTGAGCCGT+GGG | - | Chr2:614657-614676 | None:intergenic | 40.0% |
! | CGGCTCAAAATTTGCGATTT+TGG | + | Chr2:614658-614677 | MsG0280006337.01.T01:CDS | 40.0% |
! | TGAAGTATTTCGTCCTTGGA+AGG | + | Chr2:615281-615300 | MsG0280006337.01.T01:intron | 40.0% |
!! | AGCACAATCATGCTGTTTCA+TGG | - | Chr2:615008-615027 | None:intergenic | 40.0% |
!!! | GTTTTGACTCCTACACATCT+TGG | + | Chr2:614185-614204 | MsG0280006337.01.T01:five_prime_UTR | 40.0% |
AGGTTATGCAGCTATAAGCC+TGG | - | Chr2:614368-614387 | None:intergenic | 45.0% | |
AGTCTTCTCTGCTTCACTCT+AGG | + | Chr2:614787-614806 | MsG0280006337.01.T01:intron | 45.0% | |
CCATACATCTGCCAACTGAA+AGG | - | Chr2:615525-615544 | None:intergenic | 45.0% | |
CCTTTCAGTTGGCAGATGTA+TGG | + | Chr2:615522-615541 | MsG0280006337.01.T01:CDS | 45.0% | |
CTCGAGAACACCTTATTGGA+TGG | + | Chr2:614622-614641 | MsG0280006337.01.T01:CDS | 45.0% | |
GAAGCTCGAGAACACCTTAT+TGG | + | Chr2:614618-614637 | MsG0280006337.01.T01:CDS | 45.0% | |
GGATCATCTTGGTCCTCAAA+TGG | - | Chr2:615590-615609 | None:intergenic | 45.0% | |
GTTATGGAATATGCTGCTGG+TGG | + | Chr2:614212-614231 | MsG0280006337.01.T01:intron | 45.0% | |
TCTAGGCCTAAGTCTACAGT+GGG | + | Chr2:614804-614823 | MsG0280006337.01.T01:intron | 45.0% | |
TCTCTACGTGAAAGAACCTC+TGG | - | Chr2:614849-614868 | None:intergenic | 45.0% | |
TGGAAGATTCAGTGAAGACG+AGG | + | Chr2:614262-614281 | MsG0280006337.01.T01:CDS | 45.0% | |
TTATTCGCTTCAAGGAGGTC+TGG | + | Chr2:614029-614048 | MsG0280006337.01.T01:intron | 45.0% | |
! | ACGTAGAGAATATGACGGGA+AGG | + | Chr2:614860-614879 | MsG0280006337.01.T01:intron | 45.0% |
! | AGGTAAGACTAGTCCTTCCA+AGG | - | Chr2:615297-615316 | None:intergenic | 45.0% |
! | ATCGCAAATTTTGAGCCGTG+GGG | - | Chr2:614656-614675 | None:intergenic | 45.0% |
! | TCACGCGATTTCAGTTTTGC+AGG | + | Chr2:614160-614179 | MsG0280006337.01.T01:intron | 45.0% |
! | TCCGGCGTTGAAATAGTGAA+AGG | + | Chr2:613713-613732 | MsG0280006337.01.T01:five_prime_UTR | 45.0% |
! | TTGGCAGATGTATGGTCTTG+TGG | + | Chr2:615530-615549 | MsG0280006337.01.T01:CDS | 45.0% |
! | TTTGACCGAATTTGCTCTGC+TGG | + | Chr2:614242-614261 | MsG0280006337.01.T01:CDS | 45.0% |
!! | AAAGGTGATGGAGAAGTACG+AGG | + | Chr2:613731-613750 | MsG0280006337.01.T01:five_prime_UTR | 45.0% |
!! | AAGAACCTCTGGTGCTATGT+AGG | - | Chr2:614838-614857 | None:intergenic | 45.0% |
!! | GGCAGATTTGCTGCAAAAGA+AGG | - | Chr2:614588-614607 | None:intergenic | 45.0% |
CTCTAGGCCTAAGTCTACAG+TGG | + | Chr2:614803-614822 | MsG0280006337.01.T01:intron | 50.0% | |
TAACTCCTGAGATGAGCTGC+TGG | - | Chr2:614464-614483 | None:intergenic | 50.0% | |
TCTCGAGCTTCAAGTCTCGA+TGG | - | Chr2:614609-614628 | None:intergenic | 50.0% | |
TTCTTCCAGCAGCTCATCTC+AGG | + | Chr2:614456-614475 | MsG0280006337.01.T01:CDS | 50.0% | |
! | AAATTTTGAGCCGTGGGGCA+GGG | - | Chr2:614651-614670 | None:intergenic | 50.0% |
! | CGCGATTTCAGTTTTGCAGG+TGG | + | Chr2:614163-614182 | MsG0280006337.01.T01:intron | 50.0% |
! | GATGAGAGGCGTGAAAGTGA+AGG | + | Chr2:613495-613514 | MsG0280006337.01.T01:five_prime_UTR | 50.0% |
! | GGAGAAGTACGAGGTGGTTA+AGG | + | Chr2:613740-613759 | MsG0280006337.01.T01:five_prime_UTR | 50.0% |
GGGGTTCCCACTGTAGACTT+AGG | - | Chr2:614813-614832 | None:intergenic | 55.0% | |
! | CAAATTTTGAGCCGTGGGGC+AGG | - | Chr2:614652-614671 | None:intergenic | 55.0% |
! | GGTGGGAGCATACCCATTTG+AGG | + | Chr2:615574-615593 | MsG0280006337.01.T01:CDS | 55.0% |
!! | ACCTCTGGTGCTATGTAGGC+TGG | - | Chr2:614834-614853 | None:intergenic | 55.0% |
!! | CCTCTGGTGCTATGTAGGCT+GGG | - | Chr2:614833-614852 | None:intergenic | 55.0% |
!! | CTCTGGTGCTATGTAGGCTG+GGG | - | Chr2:614832-614851 | None:intergenic | 55.0% |
!! | GGTGATGGAGAAGTACGAGG+TGG | + | Chr2:613734-613753 | MsG0280006337.01.T01:five_prime_UTR | 55.0% |
CCCAGCCTACATAGCACCAG+AGG | + | Chr2:614830-614849 | MsG0280006337.01.T01:intron | 60.0% | |
GGCAGGGCTGCCATCCAATA+AGG | - | Chr2:614635-614654 | None:intergenic | 60.0% | |
TGGATGGCAGCCCTGCCCCA+CGG | + | Chr2:614638-614657 | MsG0280006337.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 613450 | 615658 | 613450 | ID=MsG0280006337.01;Name=MsG0280006337.01 |
Chr2 | mRNA | 613468 | 615658 | 613468 | ID=MsG0280006337.01.T01;Parent=MsG0280006337.01;Name=MsG0280006337.01.T01;_AED=0.49;_eAED=0.52;_QI=382|0.66|0.71|1|0|0|7|0|128 |
Chr2 | exon | 613468 | 613583 | 613468 | ID=MsG0280006337.01.T01:exon:676;Parent=MsG0280006337.01.T01 |
Chr2 | five_prime_UTR | 613468 | 613583 | 613468 | ID=MsG0280006337.01.T01:five_prime_utr;Parent=MsG0280006337.01.T01 |
Chr2 | five_prime_UTR | 613706 | 613856 | 613706 | ID=MsG0280006337.01.T01:five_prime_utr;Parent=MsG0280006337.01.T01 |
Chr2 | five_prime_UTR | 613971 | 614045 | 613971 | ID=MsG0280006337.01.T01:five_prime_utr;Parent=MsG0280006337.01.T01 |
Chr2 | five_prime_UTR | 614182 | 614221 | 614182 | ID=MsG0280006337.01.T01:five_prime_utr;Parent=MsG0280006337.01.T01 |
Chr2 | CDS | 614222 | 614283 | 614222 | ID=MsG0280006337.01.T01:cds;Parent=MsG0280006337.01.T01 |
Chr2 | CDS | 614447 | 614500 | 614447 | ID=MsG0280006337.01.T01:cds;Parent=MsG0280006337.01.T01 |
Chr2 | CDS | 614579 | 614690 | 614579 | ID=MsG0280006337.01.T01:cds;Parent=MsG0280006337.01.T01 |
Chr2 | CDS | 615500 | 615658 | 615500 | ID=MsG0280006337.01.T01:cds;Parent=MsG0280006337.01.T01 |
Chr2 | mRNA | 613450 | 615658 | 613450 | ID=MsG0280006337.01.T02;Parent=MsG0280006337.01;Name=MsG0280006337.01.T02;_AED=0.49;_eAED=0.52;_QI=367|0.66|0.71|1|0|0|7|0|128 |
Chr2 | exon | 613450 | 613550 | 613450 | ID=MsG0280006337.01.T02:exon:683;Parent=MsG0280006337.01.T02 |
Chr2 | five_prime_UTR | 613450 | 613550 | 613450 | ID=MsG0280006337.01.T02:five_prime_utr;Parent=MsG0280006337.01.T02 |
Chr2 | five_prime_UTR | 613706 | 613856 | 613706 | ID=MsG0280006337.01.T02:five_prime_utr;Parent=MsG0280006337.01.T02 |
Chr2 | five_prime_UTR | 613971 | 614045 | 613971 | ID=MsG0280006337.01.T02:five_prime_utr;Parent=MsG0280006337.01.T02 |
Chr2 | five_prime_UTR | 614182 | 614221 | 614182 | ID=MsG0280006337.01.T02:five_prime_utr;Parent=MsG0280006337.01.T02 |
Chr2 | CDS | 614222 | 614283 | 614222 | ID=MsG0280006337.01.T02:cds;Parent=MsG0280006337.01.T02 |
Chr2 | CDS | 614447 | 614500 | 614447 | ID=MsG0280006337.01.T02:cds;Parent=MsG0280006337.01.T02 |
Chr2 | CDS | 614579 | 614690 | 614579 | ID=MsG0280006337.01.T02:cds;Parent=MsG0280006337.01.T02 |
Chr2 | CDS | 615500 | 615658 | 615500 | ID=MsG0280006337.01.T02:cds;Parent=MsG0280006337.01.T02 |
Chr2 | mRNA | 613453 | 615658 | 613453 | ID=MsG0280006337.01.T03;Parent=MsG0280006337.01;Name=MsG0280006337.01.T03;_AED=0.49;_eAED=0.52;_QI=519|0.6|0.66|1|0|0|6|0|128 |
Chr2 | exon | 613453 | 613856 | 613453 | ID=MsG0280006337.01.T03:exon:684;Parent=MsG0280006337.01.T03 |
Chr2 | five_prime_UTR | 613453 | 613856 | 613453 | ID=MsG0280006337.01.T03:five_prime_utr;Parent=MsG0280006337.01.T03 |
Chr2 | five_prime_UTR | 613971 | 614045 | 613971 | ID=MsG0280006337.01.T03:five_prime_utr;Parent=MsG0280006337.01.T03 |
Chr2 | five_prime_UTR | 614182 | 614221 | 614182 | ID=MsG0280006337.01.T03:five_prime_utr;Parent=MsG0280006337.01.T03 |
Chr2 | CDS | 614222 | 614283 | 614222 | ID=MsG0280006337.01.T03:cds;Parent=MsG0280006337.01.T03 |
Chr2 | CDS | 614447 | 614500 | 614447 | ID=MsG0280006337.01.T03:cds;Parent=MsG0280006337.01.T03 |
Chr2 | CDS | 614579 | 614690 | 614579 | ID=MsG0280006337.01.T03:cds;Parent=MsG0280006337.01.T03 |
Chr2 | CDS | 615500 | 615658 | 615500 | ID=MsG0280006337.01.T03:cds;Parent=MsG0280006337.01.T03 |
Gene Sequence |
Protein sequence |