AlfalfaGEDB | MsG0280011050.01

M. sativa cultivar ZhongmuNo.1 / MsG0280011050.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011050.01.T01	XP_024631646.1	97.973	148	1	1	1	148	170	315	1.27E-103	309

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011050.01.T01	Q9SVY1	86.093	151	14	3	1	148	236	382	5.23E-88	264

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011050.01.T01	A0A396JHF9	97.973	148	1	1	1	148	170	315	6.05e-104	309

TFs/TRs:

Gene ID	Type	Classification
MsG0280011050.01.T01	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047967.01	MsG0280011050.01	-0.828626	8.098424e-55	8.093763e-52
MsG0080048889.01	MsG0280011050.01	0.827119	1.865687e-54	1.784384e-51
MsG0080048919.01	MsG0280011050.01	-0.815032	1.137778e-51	7.757893e-49
MsG0080049038.01	MsG0280011050.01	-0.842081	3.215111e-58	4.820341e-55
MsG0080049066.01	MsG0280011050.01	-0.842400	2.647133e-58	4.009227e-55
MsG0080049133.01	MsG0280011050.01	-0.805621	1.222101e-49	6.495982e-47
MsG0180000367.01	MsG0280011050.01	0.808759	2.644960e-50	1.525014e-47
MsG0180000467.01	MsG0280011050.01	-0.803048	4.198742e-49	2.088876e-46
MsG0180000719.01	MsG0280011050.01	-0.824696	7.019183e-54	6.264411e-51
MsG0180001054.01	MsG0280011050.01	-0.803506	3.374687e-49	1.698885e-46
MsG0180001072.01	MsG0280011050.01	-0.812523	4.061163e-51	2.588077e-48
MsG0180001143.01	MsG0280011050.01	0.816545	5.234175e-52	3.719549e-49
MsG0180001264.01	MsG0280011050.01	0.820933	5.278333e-53	4.234518e-50
MsG0180001614.01	MsG0280011050.01	-0.826277	2.963097e-54	2.766197e-51
MsG0180002426.01	MsG0280011050.01	-0.800301	1.536824e-48	7.131359e-46
MsG0180002935.01	MsG0280011050.01	0.805371	1.378486e-49	7.280463e-47
MsG0180003324.01	MsG0280011050.01	-0.821315	4.310477e-53	3.494814e-50
MsG0180003620.01	MsG0280011050.01	0.820966	5.186674e-53	4.165055e-50
MsG0180003757.01	MsG0280011050.01	-0.833134	6.347938e-56	7.245056e-53
MsG0180003758.01	MsG0280011050.01	-0.815783	7.743995e-52	5.390304e-49
MsG0180003779.01	MsG0280011050.01	-0.829083	6.276940e-55	6.357339e-52
MsG0180003904.01	MsG0280011050.01	-0.810745	9.891427e-51	6.011731e-48
MsG0180003908.01	MsG0280011050.01	-0.843052	1.775595e-58	2.744072e-55
MsG0180003985.01	MsG0280011050.01	-0.805336	1.402247e-49	7.399138e-47
MsG0180004124.01	MsG0280011050.01	-0.800080	1.704250e-48	7.863771e-46
MsG0180004125.01	MsG0280011050.01	-0.800187	1.620885e-48	7.499361e-46
MsG0180004322.01	MsG0280011050.01	-0.801673	8.058744e-49	3.871382e-46
MsG0180004731.01	MsG0280011050.01	-0.800775	1.230420e-48	5.778136e-46
MsG0180004737.01	MsG0280011050.01	-0.836926	7.027555e-57	8.987051e-54
MsG0180004787.01	MsG0280011050.01	-0.835192	1.936038e-56	2.350147e-53
MsG0180005369.01	MsG0280011050.01	-0.850283	1.877381e-60	3.658715e-57
MsG0180005707.01	MsG0280011050.01	0.808660	2.776925e-50	1.596941e-47
MsG0180005720.01	MsG0280011050.01	0.826803	2.219652e-54	2.103396e-51
MsG0180005817.01	MsG0280011050.01	-0.815989	6.969192e-52	4.877953e-49
MsG0180005847.01	MsG0280011050.01	-0.820181	7.856250e-53	6.172447e-50
MsG0180005848.01	MsG0280011050.01	-0.842202	2.986655e-58	4.494743e-55
MsG0180006063.01	MsG0280011050.01	-0.806365	8.520688e-50	4.616149e-47
MsG0180006212.01	MsG0280011050.01	-0.845039	5.205121e-59	8.564870e-56
MsG0280006381.01	MsG0280011050.01	-0.824015	1.014583e-53	8.878904e-51
MsG0280010780.01	MsG0280011050.01	-0.838340	3.048572e-57	4.070819e-54
MsG0280011016.01	MsG0280011050.01	0.814273	1.675294e-51	1.119114e-48
MsG0280011050.01	MsG0280011051.01	0.825115	5.587898e-54	5.046853e-51
MsG0280011050.01	MsG0280011200.01	-0.805819	1.110615e-49	5.933708e-47
MsG0280011050.01	MsG0280011236.01	0.813500	2.481102e-51	1.623039e-48
MsG0280011050.01	MsG0280011269.01	0.851686	7.551185e-61	1.540607e-57
MsG0280011050.01	MsG0280011299.01	-0.819187	1.325094e-52	1.012567e-49
MsG0280011050.01	MsG0280011301.01	-0.849838	2.500867e-60	4.803046e-57
MsG0280011050.01	MsG0280011475.01	-0.849994	2.261463e-60	4.365779e-57
MsG0280011050.01	MsG0380012157.01	-0.820483	6.696963e-53	5.305485e-50
MsG0280011050.01	MsG0380012281.01	-0.846911	1.613276e-59	2.819284e-56
MsG0280011050.01	MsG0380013114.01	-0.819823	9.486290e-53	7.379019e-50
MsG0280011050.01	MsG0380013473.01	-0.860387	2.140113e-63	5.840072e-60
MsG0280011050.01	MsG0380013506.01	-0.809484	1.849519e-50	1.087207e-47
MsG0280011050.01	MsG0380013956.01	-0.802019	6.840748e-49	3.315367e-46
MsG0280011050.01	MsG0380014642.01	-0.818511	1.886721e-52	1.415145e-49
MsG0280011050.01	MsG0380014735.01	-0.840350	9.166128e-58	1.302095e-54
MsG0280011050.01	MsG0380014864.01	-0.823980	1.033921e-53	9.039874e-51
MsG0280011050.01	MsG0380015201.01	-0.815298	9.932833e-52	6.821779e-49
MsG0280011050.01	MsG0380015271.01	-0.805868	1.084518e-49	5.801610e-47
MsG0280011050.01	MsG0380015752.01	-0.841766	3.894319e-58	5.780832e-55
MsG0280011050.01	MsG0380016056.01	-0.804790	1.823744e-49	9.489540e-47
MsG0280011050.01	MsG0380016096.01	-0.842437	2.586741e-58	3.922540e-55
MsG0280011050.01	MsG0380016110.01	0.805651	1.204269e-49	6.406307e-47
MsG0280011050.01	MsG0380016166.01	-0.802854	4.604932e-49	2.279773e-46
MsG0280011050.01	MsG0380016229.01	-0.827769	1.302871e-54	1.269896e-51
MsG0280011050.01	MsG0380016241.01	-0.807072	6.041744e-50	3.333220e-47
MsG0280011050.01	MsG0380016380.01	-0.809305	2.020706e-50	1.182217e-47
MsG0280011050.01	MsG0380016456.01	-0.800588	1.343061e-48	6.277577e-46
MsG0280011050.01	MsG0380016476.01	0.801856	7.391927e-49	3.567729e-46
MsG0280011050.01	MsG0380016790.01	-0.807440	5.048947e-50	2.812337e-47
MsG0280011050.01	MsG0380016835.01	-0.821795	3.338632e-53	2.743735e-50
MsG0280011050.01	MsG0380016889.01	-0.829931	3.904603e-55	4.054122e-52
MsG0280011050.01	MsG0380016931.01	-0.826642	2.424705e-54	2.287204e-51
MsG0280011050.01	MsG0380016934.01	-0.827996	1.149081e-54	1.127545e-51
MsG0280011050.01	MsG0380016935.01	-0.833045	6.681831e-56	7.605731e-53
MsG0280011050.01	MsG0380016960.01	-0.803874	2.830025e-49	1.438261e-46
MsG0280011050.01	MsG0380017405.01	-0.829267	5.663397e-55	5.768214e-52
MsG0280011050.01	MsG0380017406.01	-0.813457	2.534924e-51	1.656385e-48
MsG0280011050.01	MsG0380017895.01	-0.821774	3.377268e-53	2.773749e-50
MsG0280011050.01	MsG0380017928.01	-0.810893	9.190880e-51	5.608119e-48
MsG0280011050.01	MsG0380017962.01	-0.822050	2.915199e-53	2.412973e-50
MsG0280011050.01	MsG0380018072.01	-0.827294	1.693934e-54	1.628540e-51
MsG0280011050.01	MsG0480018112.01	-0.846457	2.146143e-59	3.696665e-56
MsG0280011050.01	MsG0480018201.01	-0.810831	9.478096e-51	5.773719e-48
MsG0280011050.01	MsG0480018463.01	-0.810296	1.237166e-50	7.429263e-48
MsG0280011050.01	MsG0480018626.01	-0.810596	1.065804e-50	6.451597e-48
MsG0280011050.01	MsG0480018628.01	-0.820476	6.723772e-53	5.325705e-50
MsG0280011050.01	MsG0480019183.01	-0.820564	6.417501e-53	5.095459e-50
MsG0280011050.01	MsG0480019861.01	-0.818059	2.388337e-52	1.769144e-49
MsG0280011050.01	MsG0480020841.01	-0.805233	1.473719e-49	7.755767e-47
MsG0280011050.01	MsG0480020842.01	-0.806946	6.424257e-50	3.532724e-47
MsG0280011050.01	MsG0480020938.01	-0.819165	1.340057e-52	1.023389e-49
MsG0280011050.01	MsG0480020958.01	0.857783	1.290400e-62	3.221498e-59
MsG0280011050.01	MsG0480021175.01	0.829803	4.196522e-55	4.341709e-52
MsG0280011050.01	MsG0480021205.01	-0.802282	6.042093e-49	2.948011e-46
MsG0280011050.01	MsG0480021226.01	0.851177	1.051564e-60	2.110535e-57
MsG0280011050.01	MsG0480021327.01	-0.809715	1.650140e-50	9.760255e-48
MsG0280011050.01	MsG0480021912.01	-0.844186	8.833281e-59	1.414981e-55
MsG0280011050.01	MsG0480022141.01	0.838427	2.895356e-57	3.876691e-54
MsG0280011050.01	MsG0480022142.01	0.821101	4.827910e-53	3.891335e-50
MsG0280011050.01	MsG0480022428.01	0.820130	8.069662e-53	6.331521e-50
MsG0280011050.01	MsG0480022687.01	-0.802476	5.510824e-49	2.702049e-46
MsG0280011050.01	MsG0480022765.01	-0.846885	1.639099e-59	2.861976e-56
MsG0280011050.01	MsG0480023067.01	0.860506	1.970503e-63	5.398835e-60
MsG0280011050.01	MsG0480023103.01	-0.805777	1.133182e-49	6.047864e-47
MsG0280011050.01	MsG0480023125.01	0.831187	1.923867e-55	2.072229e-52
MsG0280011050.01	MsG0480023152.01	-0.835478	1.639312e-56	2.007030e-53
MsG0280011050.01	MsG0480023242.01	-0.807329	5.329835e-50	2.960307e-47
MsG0280011050.01	MsG0480023244.01	-0.809863	1.533001e-50	9.102650e-48
MsG0280011050.01	MsG0480023322.01	0.806800	6.898022e-50	3.778980e-47
MsG0280011050.01	MsG0480023695.01	-0.815210	1.038975e-51	7.118019e-49
MsG0280011050.01	MsG0480023749.01	-0.818473	1.924212e-52	1.441832e-49
MsG0280011050.01	MsG0480023851.01	-0.807079	6.021729e-50	3.322752e-47
MsG0280011050.01	MsG0580024135.01	-0.830293	3.187008e-55	3.343568e-52
MsG0280011050.01	MsG0580024309.01	-0.846906	1.618408e-59	2.827773e-56
MsG0280011050.01	MsG0580024493.01	-0.832649	8.378087e-56	9.423681e-53
MsG0280011050.01	MsG0580024571.01	-0.803138	4.021206e-49	2.005241e-46
MsG0280011050.01	MsG0580024678.01	-0.845154	4.846752e-59	8.003117e-56
MsG0280011050.01	MsG0580025105.01	-0.830539	2.774940e-55	2.932053e-52
MsG0280011050.01	MsG0580025117.01	0.839059	1.987181e-57	2.712438e-54
MsG0280011050.01	MsG0580025153.01	-0.803634	3.175123e-49	1.603597e-46
MsG0280011050.01	MsG0580025355.01	-0.811097	8.301164e-51	5.092545e-48
MsG0280011050.01	MsG0580025419.01	0.821786	3.354522e-53	2.756093e-50
MsG0280011050.01	MsG0580025486.01	-0.844155	9.006946e-59	1.441295e-55
MsG0280011050.01	MsG0580026073.01	-0.821853	3.237393e-53	2.664981e-50
MsG0280011050.01	MsG0580026362.01	-0.804043	2.610451e-49	1.332392e-46
MsG0280011050.01	MsG0580026546.01	0.856823	2.478275e-62	5.989716e-59
MsG0280011050.01	MsG0580027276.01	-0.808750	2.657218e-50	1.531709e-47
MsG0280011050.01	MsG0580027517.01	0.822208	2.679045e-53	2.227661e-50
MsG0280011050.01	MsG0580028302.01	0.807035	6.154072e-50	3.391951e-47
MsG0280011050.01	MsG0580029177.01	-0.835061	2.089452e-56	2.526132e-53
MsG0280011050.01	MsG0580029296.01	0.811493	6.809938e-51	4.221692e-48
MsG0280011050.01	MsG0580029623.01	0.819959	8.830392e-53	6.895108e-50
MsG0280011050.01	MsG0580029751.01	-0.822566	2.212529e-53	1.858778e-50
MsG0280011050.01	MsG0580029792.01	-0.811457	6.933357e-51	4.294095e-48
MsG0280011050.01	MsG0580030019.01	0.821089	4.860219e-53	3.916044e-50
MsG0280011050.01	MsG0580030197.01	-0.824610	7.353141e-54	6.546439e-51
MsG0280011050.01	MsG0580030237.01	-0.835101	2.041242e-56	2.470751e-53
MsG0280011050.01	MsG0680030635.01	-0.850701	1.432364e-60	2.829935e-57
MsG0280011050.01	MsG0680030719.01	0.819314	1.239546e-52	9.504903e-50
MsG0280011050.01	MsG0680031062.01	0.813925	1.999201e-51	1.322902e-48
MsG0280011050.01	MsG0680031449.01	-0.814562	1.446173e-51	9.736569e-49
MsG0280011050.01	MsG0680031813.01	-0.821296	4.353969e-53	3.528191e-50
MsG0280011050.01	MsG0680034139.01	0.844398	7.749118e-59	1.249449e-55
MsG0280011050.01	MsG0680034229.01	-0.835062	2.087624e-56	2.524003e-53
MsG0280011050.01	MsG0680035584.01	-0.833708	4.567185e-56	5.301953e-53
MsG0280011050.01	MsG0680035841.01	0.814649	1.383887e-51	9.338813e-49
MsG0280011050.01	MsG0680035870.01	-0.800429	1.447118e-48	6.736926e-46
MsG0280011050.01	MsG0780036890.01	0.803154	3.990670e-49	1.990872e-46
MsG0280011050.01	MsG0780037751.01	0.828335	9.520909e-55	9.434568e-52
MsG0280011050.01	MsG0780038047.01	-0.832765	7.841433e-56	8.850392e-53
MsG0280011050.01	MsG0780038305.01	0.825544	4.424267e-54	4.044741e-51
MsG0280011050.01	MsG0780038985.01	0.802252	6.127525e-49	2.987428e-46
MsG0280011050.01	MsG0780039431.01	0.827721	1.338076e-54	1.302445e-51
MsG0280011050.01	MsG0780039593.01	0.825406	4.769076e-54	4.342970e-51
MsG0280011050.01	MsG0780039821.01	-0.856919	2.322144e-62	5.631645e-59
MsG0280011050.01	MsG0780039836.01	-0.847298	1.263543e-59	2.235518e-56
MsG0280011050.01	MsG0780039838.01	-0.806760	7.034683e-50	3.849725e-47
MsG0280011050.01	MsG0780039839.01	-0.817727	2.837531e-52	2.082988e-49
MsG0280011050.01	MsG0780040121.01	-0.842167	3.051577e-58	4.587126e-55
MsG0280011050.01	MsG0780040283.01	-0.801599	8.346635e-49	4.002003e-46
MsG0280011050.01	MsG0780040321.01	-0.801045	1.083348e-48	5.123043e-46
MsG0280011050.01	MsG0780040352.01	-0.804359	2.243162e-49	1.154256e-46
MsG0280011050.01	MsG0780040685.01	-0.815621	8.418324e-52	5.833738e-49
MsG0280011050.01	MsG0780040702.01	-0.828375	9.310025e-55	9.237025e-52
MsG0280011050.01	MsG0780040889.01	0.802079	6.651624e-49	3.228569e-46
MsG0280011050.01	MsG0780040977.01	0.837493	5.032876e-57	6.549053e-54
MsG0280011050.01	MsG0780041173.01	-0.801202	1.006500e-48	4.778132e-46
MsG0280011050.01	MsG0780041225.01	0.814199	1.739498e-51	1.159621e-48
MsG0280011050.01	MsG0780041254.01	-0.812380	4.364987e-51	2.771087e-48
MsG0280011050.01	MsG0780041531.01	-0.873015	2.039125e-67	8.713313e-64
MsG0280011050.01	MsG0780041620.01	-0.832410	9.606191e-56	1.072853e-52
MsG0280011050.01	MsG0780041637.01	-0.806538	7.835531e-50	4.263818e-47
MsG0280011050.01	MsG0780041720.01	-0.860653	1.777858e-63	4.896220e-60
MsG0280011050.01	MsG0780041783.01	-0.845172	4.794493e-59	7.921308e-56
MsG0280011050.01	MsG0780041809.01	-0.815918	7.226550e-52	5.048117e-49
MsG0280011050.01	MsG0880041855.01	-0.820594	6.315700e-53	5.018523e-50
MsG0280011050.01	MsG0880041908.01	-0.800386	1.476984e-48	6.868213e-46
MsG0280011050.01	MsG0880042122.01	0.803925	2.762223e-49	1.405675e-46
MsG0280011050.01	MsG0880042858.01	-0.832542	8.907603e-56	9.987142e-53
MsG0280011050.01	MsG0880043261.01	0.800425	1.449731e-48	6.748474e-46
MsG0280011050.01	MsG0880044339.01	-0.810374	1.190067e-50	7.161307e-48
MsG0280011050.01	MsG0880044545.01	-0.811930	5.472168e-51	3.431557e-48
MsG0280011050.01	MsG0880044968.01	-0.811033	8.571667e-51	5.249746e-48
MsG0280011050.01	MsG0880045188.01	-0.808068	3.714072e-50	2.103010e-47
MsG0280011050.01	MsG0880045369.01	-0.827609	1.423449e-54	1.380893e-51
MsG0280011050.01	MsG0880045385.01	-0.834757	2.491492e-56	2.984756e-53
MsG0280011050.01	MsG0880045413.01	-0.817923	2.563592e-52	1.891979e-49
MsG0280011050.01	MsG0880045414.01	-0.811435	7.012452e-51	4.340492e-48
MsG0280011050.01	MsG0880045703.01	-0.828975	6.667346e-55	6.730905e-52
MsG0280011050.01	MsG0880045804.01	0.839751	1.313954e-57	1.831946e-54
MsG0280011050.01	MsG0880045808.01	0.808028	3.787098e-50	2.142091e-47
MsG0280011050.01	MsG0880045968.01	-0.862948	3.530280e-64	1.052360e-60
MsG0280011050.01	MsG0880046010.01	-0.813015	3.170037e-51	2.046513e-48
MsG0280011050.01	MsG0880046040.01	-0.801994	6.922828e-49	3.352939e-46
MsG0280011050.01	MsG0880046105.01	-0.810204	1.294987e-50	7.757752e-48
MsG0280011050.01	MsG0880046151.01	-0.800332	1.514477e-48	7.033118e-46
MsG0280011050.01	MsG0880046167.01	-0.807980	3.878145e-50	2.190798e-47
MsG0280011050.01	MsG0880046219.01	-0.824576	7.490055e-54	6.661302e-51
MsG0280011050.01	MsG0880046341.01	-0.833045	6.683238e-56	7.607231e-53
MsG0280011050.01	MsG0880046469.01	-0.847353	1.220308e-59	2.162999e-56
MsG0280011050.01	MsG0880046838.01	-0.846688	1.856526e-59	3.221643e-56
MsG0280011050.01	MsG0880047318.01	-0.836334	9.946857e-57	1.249738e-53
MsG0280011050.01	MsG0880047493.01	0.822266	2.597259e-53	2.163279e-50
MsG0280011050.01	MsG0880047664.01	0.810458	1.141172e-50	6.882319e-48
MsG0280011050.01	MsG0880047697.01	0.807368	5.230437e-50	2.907912e-47
MsG0280011050.01	MsG0880047714.01	0.801920	7.170661e-49	3.466425e-46
MsG0280006898.01	MsG0280011050.01	0.802858	4.595940e-49	2.275530e-46
MsG0280007288.01	MsG0280011050.01	-0.810354	1.202049e-50	7.229629e-48
MsG0280007291.01	MsG0280011050.01	-0.820555	6.447497e-53	5.118111e-50
MsG0280007649.01	MsG0280011050.01	-0.814599	1.419490e-51	9.566208e-49
MsG0280007650.01	MsG0280011050.01	-0.805190	1.504658e-49	7.909777e-47
MsG0280007786.01	MsG0280011050.01	0.839739	1.323574e-57	1.844685e-54
MsG0280008328.01	MsG0280011050.01	0.826910	2.093467e-54	1.990184e-51
MsG0280008697.01	MsG0280011050.01	0.848345	6.504694e-60	1.190088e-56
MsG0280009008.01	MsG0280011050.01	-0.810865	9.318754e-51	5.681862e-48
MsG0280009167.01	MsG0280011050.01	0.800731	1.255739e-48	5.890760e-46
MsG0280009742.01	MsG0280011050.01	-0.854674	1.051771e-61	2.367343e-58
MsG0280009864.01	MsG0280011050.01	-0.817719	2.850563e-52	2.091973e-49
MsG0280010149.01	MsG0280011050.01	-0.804704	1.901368e-49	9.871079e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011050.01.T01	MTR_1g093095	76.378	127	27	1	1	124	134	260	2.92e-70	213
MsG0280011050.01.T01	MTR_4g059870	36.364	110	63	4	8	113	85	191	8.75e-14	67.8
MsG0280011050.01.T01	MTR_1g112270	40.000	85	46	3	30	113	127	207	1.60e-13	67.0
MsG0280011050.01.T01	MTR_1g112270	40.000	85	46	3	30	113	116	196	2.07e-13	66.6
MsG0280011050.01.T01	MTR_8g017210	38.043	92	51	4	24	113	127	214	6.83e-12	62.4
MsG0280011050.01.T01	MTR_1g094115	38.462	91	50	4	25	113	96	182	7.76e-12	62.0
MsG0280011050.01.T01	MTR_1g094115	38.462	91	50	4	25	113	113	199	8.36e-12	62.0
MsG0280011050.01.T01	MTR_2g093960	35.922	103	62	3	12	113	86	185	1.14e-11	61.6
MsG0280011050.01.T01	MTR_1g016010	35.577	104	61	4	12	113	95	194	2.19e-11	60.8
MsG0280011050.01.T01	MTR_2g099990	38.043	92	51	4	24	113	111	198	4.17e-11	60.1
MsG0280011050.01.T01	MTR_2g099990	38.043	92	51	4	24	113	42	129	4.51e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011050.01.T01	AT3G57670	86.093	151	14	3	1	148	236	382	5.33e-89	264
MsG0280011050.01.T01	AT1G51220	82.270	141	25	0	1	141	197	337	5.76e-83	247
MsG0280011050.01.T01	AT3G20880	80.142	141	23	1	1	141	275	410	6.84e-82	247
MsG0280011050.01.T01	AT1G13290	80.952	126	22	2	1	124	120	245	1.05e-72	220
MsG0280011050.01.T01	AT1G08290	80.165	121	23	1	1	120	199	319	6.05e-70	214
MsG0280011050.01.T01	AT1G34790	80.833	120	23	0	1	120	164	283	6.19e-70	213
MsG0280011050.01.T01	AT1G34370	35.714	154	87	5	1	144	53	204	4.94e-20	84.0
MsG0280011050.01.T01	AT1G34370	38.060	134	72	4	1	125	263	394	8.47e-20	85.1
MsG0280011050.01.T01	AT1G34370	38.060	134	72	4	1	125	263	394	8.47e-20	85.1
MsG0280011050.01.T01	AT5G22890	38.931	131	67	6	1	121	236	363	1.98e-16	75.1
MsG0280011050.01.T01	AT2G02080	35.455	110	63	4	8	113	101	206	4.66e-14	68.6
MsG0280011050.01.T01	AT2G02080	35.455	110	63	4	8	113	101	206	4.66e-14	68.6
MsG0280011050.01.T01	AT2G02080	35.455	110	63	4	8	113	101	206	4.66e-14	68.6
MsG0280011050.01.T01	AT2G02080	35.455	110	63	4	8	113	101	206	4.66e-14	68.6
MsG0280011050.01.T01	AT5G66730	36.937	111	60	6	8	113	79	184	1.59e-13	67.0
MsG0280011050.01.T01	AT1G55110	38.710	93	51	4	23	113	128	216	3.90e-12	63.2
MsG0280011050.01.T01	AT1G55110	38.710	93	51	4	23	113	128	216	3.90e-12	63.2
MsG0280011050.01.T01	AT1G55110	38.710	93	51	4	23	113	128	216	3.90e-12	63.2
MsG0280011050.01.T01	AT5G03150	38.043	92	53	3	23	113	118	206	5.54e-12	62.8
MsG0280011050.01.T01	AT1G14580	40.217	92	49	4	24	113	118	205	8.17e-12	62.0
MsG0280011050.01.T01	AT1G14580	40.217	92	49	4	24	113	118	205	8.17e-12	62.0
MsG0280011050.01.T01	AT1G14580	40.217	92	49	4	24	113	132	219	9.97e-12	62.0
MsG0280011050.01.T01	AT2G02070	40.000	85	46	3	30	113	124	204	1.25e-11	61.6
MsG0280011050.01.T01	AT2G02070	40.000	85	46	3	30	113	124	204	1.25e-11	61.6
MsG0280011050.01.T01	AT2G02080	40.000	85	46	3	30	113	49	129	1.34e-11	61.6
MsG0280011050.01.T01	AT2G02080	40.000	85	46	3	30	113	49	129	1.34e-11	61.6
MsG0280011050.01.T01	AT3G50700	39.474	76	44	2	39	113	112	186	1.50e-11	61.2
MsG0280011050.01.T01	AT3G45260	42.105	76	42	2	39	113	118	192	9.51e-11	58.9
MsG0280011050.01.T01	AT3G45260	42.105	76	42	2	39	113	118	192	9.51e-11	58.9

Find 23 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGTTCCTCTTAGAGATTC+TGG	0.183675	2:+78884465	None:intergenic
CAACACTTTCTACACATAAA+TGG	0.204972	2:+78884306	None:intergenic
AAAGATCATATCAAGGCTTT+TGG	0.250816	2:-78884180	MsG0280011050.01.T01:CDS
GGAAATGGACATAAAGCTTA+TGG	0.262958	2:-78884159	MsG0280011050.01.T01:CDS
AACTTTGGTATTGTTGTTGT+GGG	0.402964	2:-78884230	MsG0280011050.01.T01:CDS
TGCAAAGCATTTGCAGTAAG+AGG	0.436467	2:-78884285	MsG0280011050.01.T01:CDS
AAACTTTGGTATTGTTGTTG+TGG	0.458245	2:-78884231	MsG0280011050.01.T01:CDS
CCATGTTATTGTTGTGCACC+TGG	0.466023	2:-78884420	MsG0280011050.01.T01:CDS
ATCACTTAAAGATCATATCA+AGG	0.535427	2:-78884187	MsG0280011050.01.T01:CDS
ACATGGATCACAATATAGAA+AGG	0.537364	2:-78884490	MsG0280011050.01.T01:CDS
CCAGGTGCACAACAATAACA+TGG	0.547993	2:+78884420	None:intergenic
TCAATGTTGTTCTTGCATCC+AGG	0.558572	2:+78884402	None:intergenic
CATGGATCACAATATAGAAA+GGG	0.565142	2:-78884489	MsG0280011050.01.T01:CDS
ACACATTACAAGAGAAAGCA+TGG	0.565234	2:-78884336	MsG0280011050.01.T01:CDS
GGGAGTCTTAGCATTGCTGT+TGG	0.566939	2:+78884441	None:intergenic
TAGATGCATATGTGGGGACA+TGG	0.582440	2:-78884507	None:intergenic
AAGGGACCAGAATCTCTAAG+AGG	0.583893	2:-78884471	MsG0280011050.01.T01:CDS
AGTGTTCTAAAATCTTTGAG+TGG	0.612744	2:+78884363	None:intergenic
CATTTGCAGTAAGAGGTGAC+TGG	0.624837	2:-78884278	MsG0280011050.01.T01:CDS
CAAGATCAAGATGATGAACA+TGG	0.669051	2:-78884117	MsG0280011050.01.T01:CDS
AATATATAGATGCATATGTG+GGG	0.677061	2:-78884513	None:intergenic
CAGGTGCACAACAATAACAT+GGG	0.695885	2:+78884421	None:intergenic
GATCAAGATGATGAACATGG+TGG	0.762207	2:-78884114	MsG0280011050.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATCACTTAAAGATCATATCA+AGG	-	Chr2:78884385-78884404	MsG0280011050.01.T01:CDS	25.0%
!!	TGATCTTTTGTGCTTAAAAT+CGG	+	Chr2:78884369-78884388	None:intergenic	25.0%
	ACATGGATCACAATATAGAA+AGG	-	Chr2:78884082-78884101	MsG0280011050.01.T01:CDS	30.0%
	CAACACTTTCTACACATAAA+TGG	+	Chr2:78884269-78884288	None:intergenic	30.0%
	CATGGATCACAATATAGAAA+GGG	-	Chr2:78884083-78884102	MsG0280011050.01.T01:CDS	30.0%
!	AAACTTTGGTATTGTTGTTG+TGG	-	Chr2:78884341-78884360	MsG0280011050.01.T01:CDS	30.0%
!	AAAGATCATATCAAGGCTTT+TGG	-	Chr2:78884392-78884411	MsG0280011050.01.T01:CDS	30.0%
!	AACTTTGGTATTGTTGTTGT+GGG	-	Chr2:78884342-78884361	MsG0280011050.01.T01:CDS	30.0%
!!	AGTGTTCTAAAATCTTTGAG+TGG	+	Chr2:78884212-78884231	None:intergenic	30.0%
	ACACATTACAAGAGAAAGCA+TGG	-	Chr2:78884236-78884255	MsG0280011050.01.T01:CDS	35.0%
	AGAAAAACTGTGGGAAACTT+TGG	-	Chr2:78884327-78884346	MsG0280011050.01.T01:CDS	35.0%
	CAAGATCAAGATGATGAACA+TGG	-	Chr2:78884455-78884474	MsG0280011050.01.T01:CDS	35.0%
	GGAAATGGACATAAAGCTTA+TGG	-	Chr2:78884413-78884432	MsG0280011050.01.T01:CDS	35.0%
!!	CATATCAAGGCTTTTGGAAA+TGG	-	Chr2:78884398-78884417	MsG0280011050.01.T01:CDS	35.0%
	AGAACTCACGAGAAAAACTG+TGG	-	Chr2:78884317-78884336	MsG0280011050.01.T01:CDS	40.0%
	CAGGTGCACAACAATAACAT+GGG	+	Chr2:78884154-78884173	None:intergenic	40.0%
	GAACTCACGAGAAAAACTGT+GGG	-	Chr2:78884318-78884337	MsG0280011050.01.T01:CDS	40.0%
	GATCAAGATGATGAACATGG+TGG	-	Chr2:78884458-78884477	MsG0280011050.01.T01:CDS	40.0%
	TCAATGTTGTTCTTGCATCC+AGG	+	Chr2:78884173-78884192	None:intergenic	40.0%
	TGTGTTCCTCTTAGAGATTC+TGG	+	Chr2:78884110-78884129	None:intergenic	40.0%
!	TGCAAAGCATTTGCAGTAAG+AGG	-	Chr2:78884287-78884306	MsG0280011050.01.T01:CDS	40.0%
!!	TCTTTGAGTGGTTTTGCTCT+TGG	+	Chr2:78884200-78884219	None:intergenic	40.0%
	AAGGGACCAGAATCTCTAAG+AGG	-	Chr2:78884101-78884120	MsG0280011050.01.T01:CDS	45.0%
	CATTTGCAGTAAGAGGTGAC+TGG	-	Chr2:78884294-78884313	MsG0280011050.01.T01:CDS	45.0%
	CCAGGTGCACAACAATAACA+TGG	+	Chr2:78884155-78884174	None:intergenic	45.0%
	CCATGTTATTGTTGTGCACC+TGG	-	Chr2:78884152-78884171	MsG0280011050.01.T01:CDS	45.0%
	GGGAGTCTTAGCATTGCTGT+TGG	+	Chr2:78884134-78884153	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	78884074	78884520	78884074	ID=MsG0280011050.01;Name=MsG0280011050.01
Chr2	mRNA	78884074	78884520	78884074	ID=MsG0280011050.01.T01;Parent=MsG0280011050.01;Name=MsG0280011050.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|148
Chr2	exon	78884074	78884520	78884074	ID=MsG0280011050.01.T01:exon:20859;Parent=MsG0280011050.01.T01
Chr2	CDS	78884074	78884520	78884074	ID=MsG0280011050.01.T01:cds;Parent=MsG0280011050.01.T01

Gene Sequence

>MsG0280011050.01.T01

ATGTGGGGACATGGATCACAATATAGAAAGGGACCAGAATCTCTAAGAGGAACACAACCAACAGCAATGCTAAGACTCCCATGTTATTGTTGTGCACCTGGATGCAAGAACAACATTGATCATCCAAGAGCAAAACCACTCAAAGATTTTAGAACACTTCAAACACATTACAAGAGAAAGCATGGAATAAAGCCATTTATGTGTAGAAAGTGTTGCAAAGCATTTGCAGTAAGAGGTGACTGGAGAACTCACGAGAAAAACTGTGGGAAACTTTGGTATTGTTGTTGTGGGTCCGATTTTAAGCACAAAAGATCACTTAAAGATCATATCAAGGCTTTTGGAAATGGACATAAAGCTTATGGAATTGACGAATGTCTTGATCAAGATCAAGATGATGAACATGGTGGCTCTGAAATTGAGCAAGACAATGAATCTTTTCAGTCATAG

Protein sequence

>MsG0280011050.01.T01

MWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCCCGSDFKHKRSLKDHIKAFGNGHKAYGIDECLDQDQDDEHGGSEIEQDNESFQS*