Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001147.01.T01 | XP_013466543.1 | 89.583 | 336 | 18 | 1 | 9 | 327 | 26 | 361 | 0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001147.01.T01 | Q9LVI4 | 35.625 | 320 | 151 | 15 | 15 | 299 | 33 | 332 | 5.33E-31 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001147.01.T01 | G8A016 | 89.583 | 336 | 18 | 1 | 9 | 327 | 26 | 361 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0180001147.01.T01 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0180001147.01 | -0.802457 | 5.560048e-49 | 2.724917e-46 |
| MsG0080048694.01 | MsG0180001147.01 | 0.809240 | 2.086157e-50 | 1.218471e-47 |
| MsG0080048695.01 | MsG0180001147.01 | 0.809818 | 1.567500e-50 | 9.296731e-48 |
| MsG0080049023.01 | MsG0180001147.01 | 0.834949 | 2.228882e-56 | 2.686051e-53 |
| MsG0180000002.01 | MsG0180001147.01 | -0.820849 | 5.520150e-53 | 4.418051e-50 |
| MsG0180000367.01 | MsG0180001147.01 | -0.834215 | 3.409774e-56 | 4.019174e-53 |
| MsG0180000719.01 | MsG0180001147.01 | 0.850625 | 1.504932e-60 | 2.965894e-57 |
| MsG0180001147.01 | MsG0180001655.01 | 0.824223 | 9.069619e-54 | 7.984123e-51 |
| MsG0180001147.01 | MsG0180001656.01 | 0.814934 | 1.196597e-51 | 8.136847e-49 |
| MsG0180001147.01 | MsG0180003238.01 | -0.807040 | 6.138169e-50 | 3.383650e-47 |
| MsG0180001147.01 | MsG0180003324.01 | 0.829383 | 5.309492e-55 | 5.425756e-52 |
| MsG0180001147.01 | MsG0180003620.01 | -0.815531 | 8.815909e-52 | 6.093678e-49 |
| MsG0180001147.01 | MsG0180003880.01 | 0.807952 | 3.930593e-50 | 2.218813e-47 |
| MsG0180001147.01 | MsG0180003905.01 | -0.808287 | 3.334960e-50 | 1.899385e-47 |
| MsG0180001147.01 | MsG0180004058.01 | -0.806615 | 7.546509e-50 | 4.114523e-47 |
| MsG0180001147.01 | MsG0180004124.01 | 0.890903 | 6.463117e-74 | 5.541436e-70 |
| MsG0180001147.01 | MsG0180004125.01 | 0.894204 | 3.071137e-75 | 3.023581e-71 |
| MsG0180001147.01 | MsG0180004322.01 | 0.816757 | 4.689942e-52 | 3.352433e-49 |
| MsG0180001147.01 | MsG0180004731.01 | 0.809639 | 1.713141e-50 | 1.011300e-47 |
| MsG0180001147.01 | MsG0180004737.01 | 0.820103 | 8.185652e-53 | 6.417832e-50 |
| MsG0180001147.01 | MsG0180005028.01 | -0.840219 | 9.919985e-58 | 1.403521e-54 |
| MsG0180001147.01 | MsG0180005369.01 | 0.849112 | 3.985063e-60 | 7.476193e-57 |
| MsG0180001147.01 | MsG0180005819.01 | -0.863573 | 2.260444e-64 | 6.884449e-61 |
| MsG0180001147.01 | MsG0180006183.01 | -0.801461 | 8.907395e-49 | 4.256305e-46 |
| MsG0180001147.01 | MsG0280006316.01 | -0.802627 | 5.127741e-49 | 2.523960e-46 |
| MsG0180001147.01 | MsG0280006381.01 | 0.832130 | 1.127002e-55 | 1.248146e-52 |
| MsG0180001147.01 | MsG0280006402.01 | 0.839931 | 1.179639e-57 | 1.654098e-54 |
| MsG0180001147.01 | MsG0280006717.01 | -0.848942 | 4.443077e-60 | 8.288471e-57 |
| MsG0180001147.01 | MsG0280007288.01 | 0.830019 | 3.717643e-55 | 3.869470e-52 |
| MsG0180001147.01 | MsG0280007291.01 | 0.829920 | 3.928412e-55 | 4.077603e-52 |
| MsG0180001147.01 | MsG0280007653.01 | 0.812971 | 3.241519e-51 | 2.090076e-48 |
| MsG0180001147.01 | MsG0280007786.01 | -0.801084 | 1.063979e-48 | 5.036205e-46 |
| MsG0180001147.01 | MsG0280008697.01 | -0.806653 | 7.409166e-50 | 4.043376e-47 |
| MsG0180001147.01 | MsG0280009079.01 | 0.808146 | 3.573964e-50 | 2.027937e-47 |
| MsG0180001147.01 | MsG0280009094.01 | 0.825931 | 3.580689e-54 | 3.310109e-51 |
| MsG0180001147.01 | MsG0280009526.01 | -0.825716 | 4.026958e-54 | 3.699764e-51 |
| MsG0180001147.01 | MsG0280009742.01 | 0.827565 | 1.458260e-54 | 1.412920e-51 |
| MsG0180001147.01 | MsG0280009864.01 | 0.817794 | 2.740623e-52 | 2.015501e-49 |
| MsG0180001147.01 | MsG0280010142.01 | 0.820528 | 6.541693e-53 | 5.188849e-50 |
| MsG0180001147.01 | MsG0280010617.01 | -0.852877 | 3.459118e-61 | 7.333224e-58 |
| MsG0180001147.01 | MsG0280010825.01 | -0.826327 | 2.882769e-54 | 2.694942e-51 |
| MsG0180001147.01 | MsG0280010854.01 | 0.811723 | 6.071661e-51 | 3.786736e-48 |
| MsG0180001147.01 | MsG0280010994.01 | 0.842495 | 2.497182e-58 | 3.793189e-55 |
| MsG0180001147.01 | MsG0280011269.01 | -0.822979 | 1.773084e-53 | 1.507080e-50 |
| MsG0180001147.01 | MsG0280011281.01 | 0.804806 | 1.810447e-49 | 9.424234e-47 |
| MsG0180001147.01 | MsG0280011475.01 | 0.843175 | 1.646944e-58 | 2.555212e-55 |
| MsG0180001147.01 | MsG0380012148.01 | 0.816303 | 5.927795e-52 | 4.185121e-49 |
| MsG0180001147.01 | MsG0380013473.01 | 0.802287 | 6.027514e-49 | 2.941317e-46 |
| MsG0180001147.01 | MsG0380013928.01 | 0.812512 | 4.084134e-51 | 2.601903e-48 |
| MsG0180001147.01 | MsG0380014029.01 | 0.817316 | 3.513290e-52 | 2.549961e-49 |
| MsG0180001147.01 | MsG0380014231.01 | 0.822889 | 1.860530e-53 | 1.577332e-50 |
| MsG0180001147.01 | MsG0380014639.01 | 0.821511 | 3.883566e-53 | 3.165816e-50 |
| MsG0180001147.01 | MsG0380014642.01 | 0.822958 | 1.792762e-53 | 1.522881e-50 |
| MsG0180001147.01 | MsG0380014735.01 | 0.824497 | 7.815672e-54 | 6.934561e-51 |
| MsG0180001147.01 | MsG0380015402.01 | -0.825933 | 3.577525e-54 | 3.307368e-51 |
| MsG0180001147.01 | MsG0380015656.01 | -0.805467 | 1.316448e-49 | 6.969952e-47 |
| MsG0180001147.01 | MsG0380015828.01 | 0.873322 | 1.608351e-67 | 6.950614e-64 |
| MsG0180001147.01 | MsG0380015985.01 | 0.830084 | 3.584344e-55 | 3.737628e-52 |
| MsG0180001147.01 | MsG0380016031.01 | -0.830519 | 2.806295e-55 | 2.963521e-52 |
| MsG0180001147.01 | MsG0380016089.01 | 0.800843 | 1.191406e-48 | 5.604924e-46 |
| MsG0180001147.01 | MsG0380016229.01 | 0.805882 | 1.076833e-49 | 5.762526e-47 |
| MsG0180001147.01 | MsG0380016250.01 | -0.824399 | 8.243975e-54 | 7.293567e-51 |
| MsG0180001147.01 | MsG0380016380.01 | 0.828152 | 1.053783e-54 | 1.038779e-51 |
| MsG0180001147.01 | MsG0380016456.01 | 0.820888 | 5.405384e-53 | 4.330980e-50 |
| MsG0180001147.01 | MsG0380016819.01 | -0.829400 | 5.258768e-55 | 5.376499e-52 |
| MsG0180001147.01 | MsG0380016889.01 | 0.805049 | 1.610555e-49 | 8.435849e-47 |
| MsG0180001147.01 | MsG0380016934.01 | 0.803003 | 4.288439e-49 | 2.131016e-46 |
| MsG0180001147.01 | MsG0380016935.01 | 0.805229 | 1.476667e-49 | 7.770284e-47 |
| MsG0180001147.01 | MsG0380017380.01 | -0.819566 | 1.086031e-52 | 8.387344e-50 |
| MsG0180001147.01 | MsG0380018035.01 | 0.835711 | 1.431453e-56 | 1.764920e-53 |
| MsG0180001147.01 | MsG0380018072.01 | 0.806821 | 6.829428e-50 | 3.743444e-47 |
| MsG0180001147.01 | MsG0480018201.01 | 0.813241 | 2.827158e-51 | 1.836249e-48 |
| MsG0180001147.01 | MsG0480018202.01 | 0.807438 | 5.054975e-50 | 2.815508e-47 |
| MsG0180001147.01 | MsG0480018203.01 | 0.809086 | 2.250743e-50 | 1.309149e-47 |
| MsG0180001147.01 | MsG0480018362.01 | -0.827955 | 1.175123e-54 | 1.151737e-51 |
| MsG0180001147.01 | MsG0480018486.01 | -0.813535 | 2.436365e-51 | 1.595320e-48 |
| MsG0180001147.01 | MsG0480021151.01 | 0.823491 | 1.346214e-53 | 1.160899e-50 |
| MsG0180001147.01 | MsG0480021175.01 | -0.906880 | 9.247099e-81 | 1.598340e-76 |
| MsG0180001147.01 | MsG0480021226.01 | -0.802551 | 5.316750e-49 | 2.611861e-46 |
| MsG0180001147.01 | MsG0480021740.01 | -0.813833 | 2.094874e-51 | 1.382752e-48 |
| MsG0180001147.01 | MsG0480022242.01 | 0.835656 | 1.477919e-56 | 1.819076e-53 |
| MsG0180001147.01 | MsG0480022244.01 | 0.827779 | 1.295417e-54 | 1.262988e-51 |
| MsG0180001147.01 | MsG0480023067.01 | -0.829936 | 3.895234e-55 | 4.044950e-52 |
| MsG0180001147.01 | MsG0480023103.01 | 0.815322 | 9.810105e-52 | 6.742006e-49 |
| MsG0180001147.01 | MsG0480023125.01 | -0.832612 | 8.560738e-56 | 9.618099e-53 |
| MsG0180001147.01 | MsG0480023152.01 | 0.809304 | 2.021293e-50 | 1.182538e-47 |
| MsG0180001147.01 | MsG0480023244.01 | 0.809768 | 1.607302e-50 | 9.520486e-48 |
| MsG0180001147.01 | MsG0480023375.01 | 0.806608 | 7.574278e-50 | 4.128852e-47 |
| MsG0180001147.01 | MsG0480023386.01 | 0.812241 | 4.679960e-51 | 2.959940e-48 |
| MsG0180001147.01 | MsG0480023575.01 | -0.810963 | 8.875660e-51 | 5.426146e-48 |
| MsG0180001147.01 | MsG0480023626.01 | -0.812869 | 3.412761e-51 | 2.194487e-48 |
| MsG0180001147.01 | MsG0480023663.01 | -0.818486 | 1.911465e-52 | 1.432745e-49 |
| MsG0180001147.01 | MsG0480023695.01 | 0.810032 | 1.409863e-50 | 8.409029e-48 |
| MsG0180001147.01 | MsG0480023851.01 | 0.825308 | 5.031132e-54 | 4.568864e-51 |
| MsG0180001147.01 | MsG0580024309.01 | 0.826365 | 2.823656e-54 | 2.642576e-51 |
| MsG0180001147.01 | MsG0580024442.01 | 0.816893 | 4.372365e-52 | 3.137012e-49 |
| MsG0180001147.01 | MsG0580024493.01 | 0.813141 | 2.974721e-51 | 1.926845e-48 |
| MsG0180001147.01 | MsG0580024688.01 | 0.800899 | 1.160762e-48 | 5.468625e-46 |
| MsG0180001147.01 | MsG0580025023.01 | -0.807464 | 4.990253e-50 | 2.781465e-47 |
| MsG0180001147.01 | MsG0580025105.01 | 0.809623 | 1.726754e-50 | 1.018895e-47 |
| MsG0180001147.01 | MsG0580025445.01 | 0.820244 | 7.598772e-53 | 5.980126e-50 |
| MsG0180001147.01 | MsG0580025464.01 | -0.807685 | 4.480332e-50 | 2.511497e-47 |
| MsG0180001147.01 | MsG0580025486.01 | 0.841960 | 3.461447e-58 | 5.169703e-55 |
| MsG0180001147.01 | MsG0580025620.01 | -0.819156 | 1.346667e-52 | 1.028159e-49 |
| MsG0180001147.01 | MsG0580026029.01 | -0.866807 | 2.175593e-65 | 7.429876e-62 |
| MsG0180001147.01 | MsG0580026073.01 | 0.873326 | 1.603159e-67 | 6.929148e-64 |
| MsG0180001147.01 | MsG0580026362.01 | 0.825037 | 5.830257e-54 | 5.254284e-51 |
| MsG0180001147.01 | MsG0580026492.01 | -0.805305 | 1.423036e-49 | 7.502862e-47 |
| MsG0180001147.01 | MsG0580027276.01 | 0.838130 | 3.453226e-57 | 4.581537e-54 |
| MsG0180001147.01 | MsG0580027517.01 | -0.808813 | 2.575561e-50 | 1.487116e-47 |
| MsG0180001147.01 | MsG0580028159.01 | 0.801211 | 1.002053e-48 | 4.758188e-46 |
| MsG0180001147.01 | MsG0580028302.01 | -0.803749 | 3.004944e-49 | 1.522168e-46 |
| MsG0180001147.01 | MsG0580028565.01 | -0.813203 | 2.882361e-51 | 1.870199e-48 |
| MsG0180001147.01 | MsG0580028916.01 | -0.847350 | 1.222703e-59 | 2.167001e-56 |
| MsG0180001147.01 | MsG0580029177.01 | 0.817452 | 3.273758e-52 | 2.385166e-49 |
| MsG0180001147.01 | MsG0580029696.01 | -0.803164 | 3.971849e-49 | 1.981986e-46 |
| MsG0180001147.01 | MsG0580029751.01 | 0.804014 | 2.647385e-49 | 1.350236e-46 |
| MsG0180001147.01 | MsG0580029792.01 | 0.804132 | 2.501839e-49 | 1.279827e-46 |
| MsG0180001147.01 | MsG0580030141.01 | -0.801089 | 1.061399e-48 | 5.024737e-46 |
| MsG0180001147.01 | MsG0680030635.01 | 0.823170 | 1.600094e-53 | 1.367332e-50 |
| MsG0180001147.01 | MsG0680031204.01 | 0.841957 | 3.466199e-58 | 5.176471e-55 |
| MsG0180001147.01 | MsG0680034139.01 | -0.829670 | 4.521152e-55 | 4.658902e-52 |
| MsG0180001147.01 | MsG0680035584.01 | 0.832671 | 8.275083e-56 | 9.313663e-53 |
| MsG0180001147.01 | MsG0780036553.01 | -0.805355 | 1.389401e-49 | 7.335122e-47 |
| MsG0180001147.01 | MsG0780037412.01 | -0.818431 | 1.967108e-52 | 1.472265e-49 |
| MsG0180001147.01 | MsG0780038321.01 | -0.818525 | 1.873273e-52 | 1.405605e-49 |
| MsG0180001147.01 | MsG0780038573.01 | 0.826097 | 3.270378e-54 | 3.037339e-51 |
| MsG0180001147.01 | MsG0780039287.01 | 0.807295 | 5.421286e-50 | 3.008392e-47 |
| MsG0180001147.01 | MsG0780039536.01 | -0.867416 | 1.391196e-65 | 4.853528e-62 |
| MsG0180001147.01 | MsG0780039821.01 | 0.803477 | 3.421932e-49 | 1.721323e-46 |
| MsG0180001147.01 | MsG0780039836.01 | 0.830629 | 2.637414e-55 | 2.794211e-52 |
| MsG0180001147.01 | MsG0780039873.01 | 0.828521 | 8.583903e-55 | 8.552947e-52 |
| MsG0180001147.01 | MsG0780040158.01 | 0.804515 | 2.082093e-49 | 1.075601e-46 |
| MsG0180001147.01 | MsG0780040276.01 | -0.837266 | 5.754089e-57 | 7.434188e-54 |
| MsG0180001147.01 | MsG0780040460.01 | -0.826183 | 3.119914e-54 | 2.904795e-51 |
| MsG0180001147.01 | MsG0780040685.01 | 0.800110 | 1.680408e-48 | 7.759525e-46 |
| MsG0180001147.01 | MsG0780040889.01 | -0.825633 | 4.213937e-54 | 3.862395e-51 |
| MsG0180001147.01 | MsG0780040978.01 | -0.807897 | 4.038263e-50 | 2.276209e-47 |
| MsG0180001147.01 | MsG0780041121.01 | 0.821889 | 3.176587e-53 | 2.617506e-50 |
| MsG0180001147.01 | MsG0780041591.01 | -0.832600 | 8.616134e-56 | 9.677074e-53 |
| MsG0180001147.01 | MsG0780041691.01 | 0.821704 | 3.505270e-53 | 2.873192e-50 |
| MsG0180001147.01 | MsG0880041908.01 | 0.809482 | 1.851355e-50 | 1.088247e-47 |
| MsG0180001147.01 | MsG0880042122.01 | -0.807408 | 5.128510e-50 | 2.854384e-47 |
| MsG0180001147.01 | MsG0880042392.01 | -0.824859 | 6.423407e-54 | 5.759434e-51 |
| MsG0180001147.01 | MsG0880043472.01 | -0.832471 | 9.277553e-56 | 1.037974e-52 |
| MsG0180001147.01 | MsG0880043550.01 | -0.810101 | 1.362593e-50 | 8.141460e-48 |
| MsG0180001147.01 | MsG0880043948.01 | -0.800307 | 1.532707e-48 | 7.113299e-46 |
| MsG0180001147.01 | MsG0880044317.01 | 0.820073 | 8.317123e-53 | 6.515207e-50 |
| MsG0180001147.01 | MsG0880044318.01 | 0.800550 | 1.367502e-48 | 6.385437e-46 |
| MsG0180001147.01 | MsG0880044548.01 | 0.801040 | 1.086227e-48 | 5.135875e-46 |
| MsG0180001147.01 | MsG0880044968.01 | 0.845637 | 3.586460e-59 | 6.015208e-56 |
| MsG0180001147.01 | MsG0880045274.01 | 0.815859 | 7.450409e-52 | 5.196047e-49 |
| MsG0180001147.01 | MsG0880045321.01 | 0.817093 | 3.943344e-52 | 2.844688e-49 |
| MsG0180001147.01 | MsG0880045369.01 | 0.834723 | 2.541913e-56 | 3.041843e-53 |
| MsG0180001147.01 | MsG0880045385.01 | 0.834917 | 2.271624e-56 | 2.734758e-53 |
| MsG0180001147.01 | MsG0880045482.01 | -0.818134 | 2.297055e-52 | 1.705047e-49 |
| MsG0180001147.01 | MsG0880045703.01 | 0.813738 | 2.199084e-51 | 1.447830e-48 |
| MsG0180001147.01 | MsG0880045968.01 | 0.837084 | 6.402655e-57 | 8.226364e-54 |
| MsG0180001147.01 | MsG0880045989.01 | -0.816616 | 5.045252e-52 | 3.592396e-49 |
| MsG0180001147.01 | MsG0880045991.01 | -0.819922 | 9.002367e-53 | 7.022207e-50 |
| MsG0180001147.01 | MsG0880046010.01 | 0.808001 | 3.838021e-50 | 2.169383e-47 |
| MsG0180001147.01 | MsG0880046151.01 | 0.800147 | 1.651914e-48 | 7.634982e-46 |
| MsG0180001147.01 | MsG0880046174.01 | 0.831718 | 1.424368e-55 | 1.558797e-52 |
| MsG0180001147.01 | MsG0880046189.01 | 0.805574 | 1.250113e-49 | 6.636713e-47 |
| MsG0180001147.01 | MsG0880046876.01 | 0.800645 | 1.307699e-48 | 6.121107e-46 |
| MsG0180001147.01 | MsG0880047090.01 | -0.856387 | 3.330774e-62 | 7.936850e-59 |
| MsG0180001147.01 | MsG0880047450.01 | -0.823559 | 1.297595e-53 | 1.121086e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180001147.01 | MsG0280007633.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001147.01.T01 | MTR_1g031930 | 89.583 | 336 | 18 | 1 | 9 | 327 | 26 | 361 | 0.0 | 588 |
| MsG0180001147.01.T01 | MTR_1g031930 | 81.191 | 319 | 16 | 1 | 9 | 327 | 26 | 300 | 1.45e-174 | 486 |
| MsG0180001147.01.T01 | MTR_6g069870 | 32.704 | 318 | 135 | 10 | 47 | 311 | 74 | 365 | 2.62e-30 | 119 |
| MsG0180001147.01.T01 | MTR_6g069870 | 32.423 | 293 | 123 | 9 | 47 | 286 | 74 | 344 | 1.99e-26 | 107 |
| MsG0180001147.01.T01 | MTR_2g029260 | 54.464 | 112 | 44 | 1 | 133 | 244 | 5 | 109 | 1.04e-24 | 97.1 |
| MsG0180001147.01.T01 | MTR_6g069870 | 35.859 | 198 | 96 | 7 | 47 | 239 | 74 | 245 | 1.26e-20 | 91.3 |
| MsG0180001147.01.T01 | MTR_2g042900 | 29.448 | 163 | 83 | 3 | 138 | 300 | 110 | 240 | 7.95e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001147.01.T01 | AT3G17860 | 35.737 | 319 | 150 | 15 | 16 | 299 | 1 | 299 | 3.27e-32 | 122 |
| MsG0180001147.01.T01 | AT3G17860 | 35.737 | 319 | 150 | 15 | 16 | 299 | 1 | 299 | 3.27e-32 | 122 |
| MsG0180001147.01.T01 | AT3G17860 | 35.625 | 320 | 151 | 15 | 15 | 299 | 20 | 319 | 4.85e-32 | 122 |
| MsG0180001147.01.T01 | AT3G17860 | 35.625 | 320 | 151 | 15 | 15 | 299 | 33 | 332 | 5.44e-32 | 122 |
| MsG0180001147.01.T01 | AT1G70700 | 35.938 | 256 | 117 | 10 | 64 | 318 | 58 | 267 | 2.63e-27 | 108 |
| MsG0180001147.01.T01 | AT1G70700 | 34.375 | 256 | 97 | 8 | 64 | 318 | 58 | 243 | 2.33e-26 | 105 |
| MsG0180001147.01.T01 | AT1G70700 | 35.714 | 224 | 99 | 9 | 64 | 286 | 58 | 237 | 1.38e-22 | 95.5 |
| MsG0180001147.01.T01 | AT1G48500 | 29.693 | 293 | 162 | 9 | 16 | 299 | 32 | 289 | 6.86e-22 | 94.4 |
| MsG0180001147.01.T01 | AT1G48500 | 31.780 | 236 | 126 | 7 | 54 | 286 | 43 | 246 | 1.94e-18 | 83.6 |
| MsG0180001147.01.T01 | AT1G48500 | 31.780 | 236 | 126 | 7 | 54 | 286 | 73 | 276 | 3.12e-18 | 83.6 |
Find 94 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTAGCAGTGATGAGTTTA+TGG | 0.220743 | 1:-16569695 | MsG0180001147.01.T01:CDS |
| CGAATGTTTCAGCAGTAAAA+TGG | 0.266336 | 1:-16571230 | MsG0180001147.01.T01:CDS |
| ATGTCTACAGGTTGACTTAT+AGG | 0.286464 | 1:+16569790 | None:intergenic |
| GATTTCTTGTTGAGGTTATA+TGG | 0.291399 | 1:+16568642 | None:intergenic |
| GAGCTAGATGCCTGAACTTC+AGG | 0.316257 | 1:+16569841 | None:intergenic |
| CCGATCGTTGGTACTGTTGC+TGG | 0.321376 | 1:-16570481 | MsG0180001147.01.T01:CDS |
| AGAAAGTGAATTTGCTTGAT+TGG | 0.344513 | 1:+16570621 | None:intergenic |
| CCCCACAACAAATTATTTAA+GGG | 0.355484 | 1:+16568371 | None:intergenic |
| CGTTGGTACTGTTGCTGGTT+TGG | 0.366943 | 1:-16570476 | MsG0180001147.01.T01:CDS |
| GAATCCAACCACTTAATATA+AGG | 0.371493 | 1:+16568341 | None:intergenic |
| TCGAGCCAATGATGCTTTGC+GGG | 0.375285 | 1:+16569414 | None:intergenic |
| GCTTATCTGCAGCTTCAAAC+AGG | 0.376253 | 1:-16569870 | MsG0180001147.01.T01:CDS |
| GAATTTGCTTGATTGGAAAC+TGG | 0.385359 | 1:+16570628 | None:intergenic |
| AATGTATATATATCTGATCT+TGG | 0.386452 | 1:+16568230 | None:intergenic |
| TTATGTTAATGATTCCTTTG+TGG | 0.387768 | 1:-16571269 | None:intergenic |
| ATGTTAGCACCCGTTGAATT+CGG | 0.403609 | 1:+16568603 | None:intergenic |
| AAAAGTTTCTGAAAACGATA+AGG | 0.408216 | 1:-16571163 | MsG0180001147.01.T01:CDS |
| AAGGCTAAAATGATATCTTC+TGG | 0.412380 | 1:-16571144 | MsG0180001147.01.T01:CDS |
| CAGGGCTCAACCTGAAGTTC+AGG | 0.416821 | 1:-16569851 | MsG0180001147.01.T01:CDS |
| CATATGTATGTTTGATACAT+AGG | 0.419348 | 1:-16568403 | MsG0180001147.01.T01:three_prime_UTR |
| GTGGTTGCATTGACTACTTT+GGG | 0.425771 | 1:+16569616 | None:intergenic |
| GGGTCTTACCTTATATTAAG+TGG | 0.426315 | 1:-16568349 | MsG0180001147.01.T01:three_prime_UTR |
| GATATCTTCTGGTTTCATAC+AGG | 0.429332 | 1:-16571133 | MsG0180001147.01.T01:intron |
| GCAGGCCCGCAAAGCATCAT+TGG | 0.432249 | 1:-16569419 | MsG0180001147.01.T01:CDS |
| TCCCTTAAATAATTTGTTGT+GGG | 0.442794 | 1:-16568372 | MsG0180001147.01.T01:three_prime_UTR |
| GGTGGTTGCATTGACTACTT+TGG | 0.451731 | 1:+16569615 | None:intergenic |
| AAATTCACATTGTGTTGTAC+AGG | 0.451805 | 1:+16570682 | None:intergenic |
| GAGTAACTCCTTCTTATAGA+AGG | 0.456364 | 1:-16568527 | MsG0180001147.01.T01:three_prime_UTR |
| GGCACAAGCCATCATGTTGT+TGG | 0.459085 | 1:-16569902 | MsG0180001147.01.T01:CDS |
| GCACAAATGCCGAATTCAAC+GGG | 0.467998 | 1:-16568612 | MsG0180001147.01.T01:CDS |
| CTGCTACTTGAGCCACTCCC+TGG | 0.474711 | 1:+16569709 | None:intergenic |
| AGCAGAGACTTTGTTCAAGA+AGG | 0.476877 | 1:+16571206 | None:intergenic |
| TGTTATCCTTGGTTTGCTAC+CGG | 0.482361 | 1:+16568552 | None:intergenic |
| CCTTAAATAATTTGTTGTGG+GGG | 0.484319 | 1:-16568370 | MsG0180001147.01.T01:three_prime_UTR |
| TTCCCTTAAATAATTTGTTG+TGG | 0.487035 | 1:-16568373 | MsG0180001147.01.T01:three_prime_UTR |
| CTTACCTTATATTAAGTGGT+TGG | 0.487092 | 1:-16568345 | MsG0180001147.01.T01:three_prime_UTR |
| CAAGCAGATGTGGTAGGAGT+AGG | 0.492652 | 1:+16569652 | None:intergenic |
| CTTAAATAATTTGTTGTGGG+GGG | 0.493779 | 1:-16568369 | MsG0180001147.01.T01:three_prime_UTR |
| GTGTGTGAAGAAACAGATAA+AGG | 0.493831 | 1:+16569742 | None:intergenic |
| CTTGAGCCACTCCCTGGCTG+TGG | 0.494035 | 1:+16569715 | None:intergenic |
| ATCATGTTGTTGGCTGGAAG+TGG | 0.494803 | 1:-16569892 | MsG0180001147.01.T01:CDS |
| TCACACACTGGTCCACAGCC+AGG | 0.498090 | 1:-16569727 | MsG0180001147.01.T01:CDS |
| ATCGAGCCAATGATGCTTTG+CGG | 0.499003 | 1:+16569413 | None:intergenic |
| CTATGTTAATGCTATACTGT+TGG | 0.500312 | 1:+16568307 | None:intergenic |
| CAAGCCATCATGTTGTTGGC+TGG | 0.503763 | 1:-16569898 | MsG0180001147.01.T01:CDS |
| AATGCGAAGCAATCACTACT+TGG | 0.504587 | 1:-16570538 | MsG0180001147.01.T01:CDS |
| GAGTTACTCACTGTTATCCT+TGG | 0.504866 | 1:+16568541 | None:intergenic |
| CCCTTAAATAATTTGTTGTG+GGG | 0.508409 | 1:-16568371 | MsG0180001147.01.T01:three_prime_UTR |
| TGTCAGATTTAGTTACATAA+CGG | 0.513985 | 1:+16568283 | None:intergenic |
| TAGAAGGAGACTACATAAGA+TGG | 0.514753 | 1:-16568511 | MsG0180001147.01.T01:three_prime_UTR |
| GCAACCACCATGGTTCCATC+AGG | 0.516533 | 1:-16569601 | MsG0180001147.01.T01:intron |
| CATCCTCAGATTTCTTGTTG+AGG | 0.517588 | 1:+16568634 | None:intergenic |
| TGTAGTCTCCTTCTATAAGA+AGG | 0.520559 | 1:+16568519 | None:intergenic |
| GAGCATGGTGGTATGTCTAC+AGG | 0.522893 | 1:+16569778 | None:intergenic |
| AACATGGTAAGTTGAGGAGC+AGG | 0.523147 | 1:+16570336 | None:intergenic |
| AAATTCGCATCAGGTGATGA+TGG | 0.528192 | 1:-16569817 | MsG0180001147.01.T01:CDS |
| CACTAGTACTGCTAATATGC+CGG | 0.529735 | 1:-16568571 | MsG0180001147.01.T01:CDS |
| GCAGAGACTTTGTTCAAGAA+GGG | 0.533315 | 1:+16571207 | None:intergenic |
| CATTCAGTTCTTCCGATCGT+TGG | 0.534965 | 1:-16570493 | MsG0180001147.01.T01:CDS |
| TCTAGCTCGAAATTCGCATC+AGG | 0.536374 | 1:-16569826 | MsG0180001147.01.T01:CDS |
| CACAACTTTGCAAGCAGATG+TGG | 0.540084 | 1:+16569642 | None:intergenic |
| GTAGACATACCACCATGCTC+TGG | 0.548004 | 1:-16569775 | MsG0180001147.01.T01:CDS |
| AGTTGAGGAGCAGGTGCAGA+TGG | 0.548573 | 1:+16570345 | None:intergenic |
| TGCACAAATGCCGAATTCAA+CGG | 0.552984 | 1:-16568613 | MsG0180001147.01.T01:CDS |
| CACAGTACCGCCATAAAACA+TGG | 0.558159 | 1:+16570320 | None:intergenic |
| AAGCAGATGTGGTAGGAGTA+GGG | 0.560739 | 1:+16569653 | None:intergenic |
| TTATCTGTTTCTTCACACAC+TGG | 0.561701 | 1:-16569739 | MsG0180001147.01.T01:CDS |
| GCGAAGCAATCACTACTTGG+TGG | 0.562781 | 1:-16570535 | MsG0180001147.01.T01:CDS |
| TGTATGTTTGATACATAGGT+AGG | 0.563499 | 1:-16568399 | MsG0180001147.01.T01:three_prime_UTR |
| ATTCCTTTGTGGCTATGTGT+AGG | 0.564917 | 1:-16571258 | MsG0180001147.01.T01:CDS |
| AATGATGCTTTGCGGGCCTG+CGG | 0.566874 | 1:+16569421 | None:intergenic |
| ACTGGTCCACAGCCAGGGAG+TGG | 0.571559 | 1:-16569721 | MsG0180001147.01.T01:CDS |
| CAATGATATCACTCCTGAGA+AGG | 0.574823 | 1:-16570289 | MsG0180001147.01.T01:intron |
| CTTATCTGCAGCTTCAAACA+GGG | 0.597255 | 1:-16569869 | MsG0180001147.01.T01:CDS |
| TCAAGCAAATTCACTTTCTG+CGG | 0.601727 | 1:-16570617 | MsG0180001147.01.T01:CDS |
| CACACACTGGTCCACAGCCA+GGG | 0.606153 | 1:-16569726 | MsG0180001147.01.T01:CDS |
| ACTTCCAGCCAACAACATGA+TGG | 0.615633 | 1:+16569894 | None:intergenic |
| CGGCATATTAGCAGTACTAG+TGG | 0.623194 | 1:+16568572 | None:intergenic |
| CCAGCAACAGTACCAACGAT+CGG | 0.636094 | 1:+16570481 | None:intergenic |
| CCATAAAACATGGTAAGTTG+AGG | 0.638856 | 1:+16570330 | None:intergenic |
| ATGGCTGCTAAAACATCTAG+AGG | 0.639805 | 1:-16569676 | MsG0180001147.01.T01:CDS |
| ACGATCGGAAGAACTGAATG+AGG | 0.643920 | 1:+16570496 | None:intergenic |
| GGACTTGAAATACCAGAGCA+TGG | 0.647705 | 1:+16569763 | None:intergenic |
| TTGCTGGTTTGGTTGAACCA+TGG | 0.654058 | 1:-16570465 | MsG0180001147.01.T01:intron |
| TAACCTCAACAAGAAATCTG+AGG | 0.657118 | 1:-16568637 | MsG0180001147.01.T01:CDS |
| AAACCTACACATAGCCACAA+AGG | 0.658430 | 1:+16571255 | None:intergenic |
| TTACATACCTGATGGAACCA+TGG | 0.681302 | 1:+16569594 | None:intergenic |
| AATATGCCGGTAGCAAACCA+AGG | 0.684244 | 1:-16568558 | MsG0180001147.01.T01:CDS |
| AGTAGTCAATGCAACCACCA+TGG | 0.687562 | 1:-16569611 | MsG0180001147.01.T01:CDS |
| ACTTTGCAAGCAGATGTGGT+AGG | 0.708662 | 1:+16569646 | None:intergenic |
| ACTGAATGAGGTGCTGTAAG+CGG | 0.719108 | 1:+16570508 | None:intergenic |
| CTTGAAATACCAGAGCATGG+TGG | 0.747182 | 1:+16569766 | None:intergenic |
| AACGGGTGCTAACATCTCTG+CGG | 0.751580 | 1:-16568595 | MsG0180001147.01.T01:CDS |
| CATACCTGATGGAACCATGG+TGG | 0.816498 | 1:+16569597 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATAAGATTTATTTTCA+TGG | - | Chr1:16570643-16570662 | MsG0180001147.01.T01:CDS | 10.0% |
| !! | CCAAAAGTTATAATAAATAT+AGG | - | Chr1:16569954-16569973 | MsG0180001147.01.T01:intron | 15.0% |
| !!! | ATAAATCTTATAATTTGTGT+TGG | + | Chr1:16570638-16570657 | None:intergenic | 15.0% |
| !!! | ATGTATAAAATTATTTTGGA+AGG | + | Chr1:16570756-16570775 | None:intergenic | 15.0% |
| !!! | ATTCATATGAAATTGATTTT+CGG | - | Chr1:16568585-16568604 | MsG0180001147.01.T01:CDS | 15.0% |
| !!! | CCTATATTTATTATAACTTT+TGG | + | Chr1:16569957-16569976 | None:intergenic | 15.0% |
| !!! | CTACATGTATAAAATTATTT+TGG | + | Chr1:16570760-16570779 | None:intergenic | 15.0% |
| !!! | TTAATTATACAAGTCTTTTT+AGG | - | Chr1:16568557-16568576 | MsG0180001147.01.T01:CDS | 15.0% |
| !! | AAAACAAATTCACATTTAGA+GGG | - | Chr1:16568469-16568488 | MsG0180001147.01.T01:three_prime_UTR | 20.0% |
| !! | AAACATCCTAAAATTATGTT+CGG | + | Chr1:16568613-16568632 | None:intergenic | 20.0% |
| !! | AATAAATTGGTATAATGTGT+TGG | - | Chr1:16570707-16570726 | MsG0180001147.01.T01:intron | 20.0% |
| !! | AATGTATATATATCTGATCT+TGG | + | Chr1:16571247-16571266 | None:intergenic | 20.0% |
| !! | ATAAGTAAAATAACATCATG+TGG | + | Chr1:16569921-16569940 | None:intergenic | 20.0% |
| !! | ATTCAAAAGTCTTTATATGT+GGG | - | Chr1:16570362-16570381 | MsG0180001147.01.T01:intron | 20.0% |
| !! | CATTATACCAATTTATTTAG+AGG | + | Chr1:16570704-16570723 | None:intergenic | 20.0% |
| !! | CCTAAAAAATCTTTATAAGT+GGG | - | Chr1:16570262-16570281 | MsG0180001147.01.T01:intron | 20.0% |
| !! | TAAAACAAATTCACATTTAG+AGG | - | Chr1:16568468-16568487 | MsG0180001147.01.T01:three_prime_UTR | 20.0% |
| !! | TGAAAAAGTCTAAATAAAGT+GGG | - | Chr1:16570570-16570589 | MsG0180001147.01.T01:CDS | 20.0% |
| !! | TGTTAAAAAATTGTGAAGTT+AGG | - | Chr1:16568398-16568417 | MsG0180001147.01.T01:three_prime_UTR | 20.0% |
| !!! | AAAAATCATCTTGTAACTTT+TGG | - | Chr1:16568894-16568913 | MsG0180001147.01.T01:intron | 20.0% |
| !!! | AAGTTACAAGATGATTTTTT+AGG | + | Chr1:16568893-16568912 | None:intergenic | 20.0% |
| !!! | ACATATAAAGACTTTTGAAT+GGG | + | Chr1:16570362-16570381 | None:intergenic | 20.0% |
| !!! | CAATATTTTAAGTTACATGT+TGG | + | Chr1:16571001-16571020 | None:intergenic | 20.0% |
| ! | AAAAACAGAAATTGAGAGAA+AGG | + | Chr1:16568378-16568397 | None:intergenic | 25.0% |
| ! | AAATCAATCCAAGTAGAATA+GGG | + | Chr1:16569234-16569253 | None:intergenic | 25.0% |
| ! | CATATGTATGTTTGATACAT+AGG | - | Chr1:16571071-16571090 | MsG0180001147.01.T01:intron | 25.0% |
| ! | CATTCAAAAGTCTTTATATG+TGG | - | Chr1:16570361-16570380 | MsG0180001147.01.T01:intron | 25.0% |
| ! | CTGAAAAAGTCTAAATAAAG+TGG | - | Chr1:16570569-16570588 | MsG0180001147.01.T01:CDS | 25.0% |
| ! | GACCATCTTATAATTTGAAA+TGG | + | Chr1:16570333-16570352 | None:intergenic | 25.0% |
| ! | GCCTAAAAAATCTTTATAAG+TGG | - | Chr1:16570261-16570280 | MsG0180001147.01.T01:intron | 25.0% |
| ! | TAAATCAATCCAAGTAGAAT+AGG | + | Chr1:16569235-16569254 | None:intergenic | 25.0% |
| ! | TAAATGGTAAGAACAAACAA+TGG | + | Chr1:16568717-16568736 | None:intergenic | 25.0% |
| ! | TGTCAGATTTAGTTACATAA+CGG | + | Chr1:16571194-16571213 | None:intergenic | 25.0% |
| ! | TTGTCATAAACTAACTCATT+AGG | - | Chr1:16569356-16569375 | MsG0180001147.01.T01:intron | 25.0% |
| !! | AAAAGTTTCTGAAAACGATA+AGG | - | Chr1:16568311-16568330 | MsG0180001147.01.T01:three_prime_UTR | 25.0% |
| !! | CACATATAAAGACTTTTGAA+TGG | + | Chr1:16570363-16570382 | None:intergenic | 25.0% |
| !! | TCGTTTTCAGAAACTTTTAA+AGG | + | Chr1:16568309-16568328 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+AGG | - | Chr1:16569448-16569467 | MsG0180001147.01.T01:intron | 25.0% |
| !!! | AAAGATGATAACTTGTTGTA+TGG | + | Chr1:16570152-16570171 | None:intergenic | 25.0% |
| !!! | CACTTTATTTAGACTTTTTC+AGG | + | Chr1:16570571-16570590 | None:intergenic | 25.0% |
| !!! | CCCACTTATAAAGATTTTTT+AGG | + | Chr1:16570265-16570284 | None:intergenic | 25.0% |
| !!! | TCCCTTAAATAATTTGTTGT+GGG | - | Chr1:16571102-16571121 | MsG0180001147.01.T01:intron | 25.0% |
| !!! | TTCCCTTAAATAATTTGTTG+TGG | - | Chr1:16571101-16571120 | MsG0180001147.01.T01:intron | 25.0% |
| !!! | TTTTGACTGAAGTTAAACAT+AGG | - | Chr1:16569531-16569550 | MsG0180001147.01.T01:intron | 25.0% |
| AAAGGTTAGATCTAATACAC+GGG | - | Chr1:16570102-16570121 | MsG0180001147.01.T01:intron | 30.0% | |
| AAATTCACATTGTGTTGTAC+AGG | + | Chr1:16568795-16568814 | None:intergenic | 30.0% | |
| AAGGCTAAAATGATATCTTC+TGG | - | Chr1:16568330-16568349 | MsG0180001147.01.T01:three_prime_UTR | 30.0% | |
| AATAACCTGAAAACAGCTTA+TGG | + | Chr1:16569338-16569357 | None:intergenic | 30.0% | |
| AATCAATCCAAGTAGAATAG+GGG | + | Chr1:16569233-16569252 | None:intergenic | 30.0% | |
| AATTGGTATAATGTGTTGGA+AGG | - | Chr1:16570711-16570730 | MsG0180001147.01.T01:intron | 30.0% | |
| AGGTTATATCACATCTGATT+TGG | + | Chr1:16570551-16570570 | None:intergenic | 30.0% | |
| AGGTTTGATCAATTGTATTC+AGG | - | Chr1:16569551-16569570 | MsG0180001147.01.T01:intron | 30.0% | |
| ATATATTCCCCTATTCTACT+TGG | - | Chr1:16569223-16569242 | MsG0180001147.01.T01:intron | 30.0% | |
| CCCCACAACAAATTATTTAA+GGG | + | Chr1:16571106-16571125 | None:intergenic | 30.0% | |
| CTATGTTAATGCTATACTGT+TGG | + | Chr1:16571170-16571189 | None:intergenic | 30.0% | |
| CTTACCTTATATTAAGTGGT+TGG | - | Chr1:16571129-16571148 | MsG0180001147.01.T01:intron | 30.0% | |
| GAAAGGTTAGATCTAATACA+CGG | - | Chr1:16570101-16570120 | MsG0180001147.01.T01:intron | 30.0% | |
| GAATAACTCCATACTACAAA+AGG | + | Chr1:16569986-16570005 | None:intergenic | 30.0% | |
| GAATCCAACCACTTAATATA+AGG | + | Chr1:16571136-16571155 | None:intergenic | 30.0% | |
| GATTTCTTGTTGAGGTTATA+TGG | + | Chr1:16570835-16570854 | None:intergenic | 30.0% | |
| GCATTGAACTAAAATTACCA+TGG | + | Chr1:16569029-16569048 | None:intergenic | 30.0% | |
| GGCCATTTCAAATTATAAGA+TGG | - | Chr1:16570328-16570347 | MsG0180001147.01.T01:CDS | 30.0% | |
| GGTTATATCACATCTGATTT+GGG | + | Chr1:16570550-16570569 | None:intergenic | 30.0% | |
| TCGTTTGCCTCTAAATAAAT+TGG | - | Chr1:16570694-16570713 | MsG0180001147.01.T01:intron | 30.0% | |
| TGTATGTTTGATACATAGGT+AGG | - | Chr1:16571075-16571094 | MsG0180001147.01.T01:intron | 30.0% | |
| ! | ACTTTTGGTCAGAATATGAA+CGG | - | Chr1:16568909-16568928 | MsG0180001147.01.T01:intron | 30.0% |
| ! | AGAAAGTGAATTTGCTTGAT+TGG | + | Chr1:16568856-16568875 | None:intergenic | 30.0% |
| !! | CCCTTAAATAATTTGTTGTG+GGG | - | Chr1:16571103-16571122 | MsG0180001147.01.T01:intron | 30.0% |
| !! | CCTTAAATAATTTGTTGTGG+GGG | - | Chr1:16571104-16571123 | MsG0180001147.01.T01:intron | 30.0% |
| !! | CTCAGCATAAGTTTTAATCA+TGG | + | Chr1:16571048-16571067 | None:intergenic | 30.0% |
| !! | CTTAAATAATTTGTTGTGGG+GGG | - | Chr1:16571105-16571124 | MsG0180001147.01.T01:intron | 30.0% |
| !! | GATAACTTGTTGTATGGAAA+AGG | + | Chr1:16570146-16570165 | None:intergenic | 30.0% |
| !! | GTGTTTGAAAGAGTTCTAAA+TGG | + | Chr1:16568733-16568752 | None:intergenic | 30.0% |
| !!! | ACAAGATGATTTTTTAGGAG+CGG | + | Chr1:16568888-16568907 | None:intergenic | 30.0% |
| AACAAACAATGGAAGGAAGT+GGG | + | Chr1:16568706-16568725 | None:intergenic | 35.0% | |
| AAGTAGCAGTGATGAGTTTA+TGG | - | Chr1:16569779-16569798 | MsG0180001147.01.T01:CDS | 35.0% | |
| AGAGCCTATCCAAAATTTGT+TGG | - | Chr1:16570459-16570478 | MsG0180001147.01.T01:intron | 35.0% | |
| AGGACAACATTCAGTTAATC+AGG | - | Chr1:16568418-16568437 | MsG0180001147.01.T01:three_prime_UTR | 35.0% | |
| AGTGCTTATGATAGTAGACA+AGG | + | Chr1:16569263-16569282 | None:intergenic | 35.0% | |
| CAAAAGTCTTTATATGTGGG+AGG | - | Chr1:16570365-16570384 | MsG0180001147.01.T01:intron | 35.0% | |
| CAATGCTTGAGATGTTTCTT+AGG | - | Chr1:16569043-16569062 | MsG0180001147.01.T01:intron | 35.0% | |
| CCATAAAACATGGTAAGTTG+AGG | + | Chr1:16569147-16569166 | None:intergenic | 35.0% | |
| CCCCCACAACAAATTATTTA+AGG | + | Chr1:16571107-16571126 | None:intergenic | 35.0% | |
| CGAATGTTTCAGCAGTAAAA+TGG | - | Chr1:16568244-16568263 | MsG0180001147.01.T01:three_prime_UTR | 35.0% | |
| CTAGTTCAACCTTACAAAAC+CGG | + | Chr1:16570309-16570328 | None:intergenic | 35.0% | |
| GAAGAGAAAAATACCTTCTC+AGG | + | Chr1:16569201-16569220 | None:intergenic | 35.0% | |
| GAGTAACTCCTTCTTATAGA+AGG | - | Chr1:16570947-16570966 | MsG0180001147.01.T01:intron | 35.0% | |
| GGGTCTTACCTTATATTAAG+TGG | - | Chr1:16571125-16571144 | MsG0180001147.01.T01:intron | 35.0% | |
| GTGTGTGAAGAAACAGATAA+AGG | + | Chr1:16569735-16569754 | None:intergenic | 35.0% | |
| TAACCTCAACAAGAAATCTG+AGG | - | Chr1:16570837-16570856 | MsG0180001147.01.T01:intron | 35.0% | |
| TAGAACTCTTTCAAACACGA+TGG | - | Chr1:16568735-16568754 | MsG0180001147.01.T01:intron | 35.0% | |
| TAGAAGGAGACTACATAAGA+TGG | - | Chr1:16570963-16570982 | MsG0180001147.01.T01:intron | 35.0% | |
| TATAATGTGTTGGAAGGAAG+AGG | - | Chr1:16570717-16570736 | MsG0180001147.01.T01:intron | 35.0% | |
| TCAAGCAAATTCACTTTCTG+CGG | - | Chr1:16568857-16568876 | MsG0180001147.01.T01:intron | 35.0% | |
| TGGTAAGAACAAACAATGGA+AGG | + | Chr1:16568713-16568732 | None:intergenic | 35.0% | |
| TGTAGTCTCCTTCTATAAGA+AGG | + | Chr1:16570958-16570977 | None:intergenic | 35.0% | |
| TTGTACTGTTACATACCTGA+TGG | + | Chr1:16569891-16569910 | None:intergenic | 35.0% | |
| ! | AATGAGAGTATGAGACTGTT+TGG | - | Chr1:16569283-16569302 | MsG0180001147.01.T01:intron | 35.0% |
| ! | ATGTCTACAGGTTGACTTAT+AGG | + | Chr1:16569687-16569706 | None:intergenic | 35.0% |
| ! | CAACTTACCATGTTTTATGG+CGG | - | Chr1:16569147-16569166 | MsG0180001147.01.T01:intron | 35.0% |
| ! | CAAGAGTGTGATCCAATAAA+GGG | + | Chr1:16570489-16570508 | None:intergenic | 35.0% |
| ! | CATGTGTTTCTGTCAATACA+GGG | - | Chr1:16570795-16570814 | MsG0180001147.01.T01:intron | 35.0% |
| ! | CCTCAACTTACCATGTTTTA+TGG | - | Chr1:16569144-16569163 | MsG0180001147.01.T01:intron | 35.0% |
| ! | GAATTTGCTTGATTGGAAAC+TGG | + | Chr1:16568849-16568868 | None:intergenic | 35.0% |
| ! | GAGATGTTTCTTAGGAGTTT+TGG | - | Chr1:16569051-16569070 | MsG0180001147.01.T01:intron | 35.0% |
| ! | GAGCCTATCCAAAATTTGTT+GGG | - | Chr1:16570460-16570479 | MsG0180001147.01.T01:intron | 35.0% |
| ! | TCAAGAGTGTGATCCAATAA+AGG | + | Chr1:16570490-16570509 | None:intergenic | 35.0% |
| ! | TCATGTGTTTCTGTCAATAC+AGG | - | Chr1:16570794-16570813 | MsG0180001147.01.T01:intron | 35.0% |
| ! | TCGGATCCGAACATAATTTT+AGG | - | Chr1:16568604-16568623 | MsG0180001147.01.T01:CDS | 35.0% |
| ! | TTATCTGTTTCTTCACACAC+TGG | - | Chr1:16569735-16569754 | MsG0180001147.01.T01:CDS | 35.0% |
| ! | TTCCCTTTTTCCGTTATACT+CGG | + | Chr1:16569475-16569494 | None:intergenic | 35.0% |
| ! | TTGCCCAACAAATTTTGGAT+AGG | + | Chr1:16570466-16570485 | None:intergenic | 35.0% |
| ! | TTTTCAGTGCAATCTGCTTA+CGG | - | Chr1:16568528-16568547 | MsG0180001147.01.T01:three_prime_UTR | 35.0% |
| !! | GATATCTTCTGGTTTCATAC+AGG | - | Chr1:16568341-16568360 | MsG0180001147.01.T01:three_prime_UTR | 35.0% |
| AAACCTACACATAGCCACAA+AGG | + | Chr1:16568222-16568241 | None:intergenic | 40.0% | |
| AAATTCGCATCAGGTGATGA+TGG | - | Chr1:16569657-16569676 | MsG0180001147.01.T01:CDS | 40.0% | |
| AATGCGAAGCAATCACTACT+TGG | - | Chr1:16568936-16568955 | MsG0180001147.01.T01:intron | 40.0% | |
| AGCAGAGACTTTGTTCAAGA+AGG | + | Chr1:16568271-16568290 | None:intergenic | 40.0% | |
| ATATCACTCACCTTACAAGC+CGG | - | Chr1:16570287-16570306 | MsG0180001147.01.T01:intron | 40.0% | |
| ATGGCTGCTAAAACATCTAG+AGG | - | Chr1:16569798-16569817 | MsG0180001147.01.T01:CDS | 40.0% | |
| ATGTTAGCACCCGTTGAATT+CGG | + | Chr1:16570874-16570893 | None:intergenic | 40.0% | |
| ATTCACATTTAGAGGGTCGT+TGG | - | Chr1:16568476-16568495 | MsG0180001147.01.T01:three_prime_UTR | 40.0% | |
| ATTCCTTTGTGGCTATGTGT+AGG | - | Chr1:16568216-16568235 | MsG0180001147.01.T01:three_prime_UTR | 40.0% | |
| CAATGATATCACTCCTGAGA+AGG | - | Chr1:16569185-16569204 | MsG0180001147.01.T01:intron | 40.0% | |
| CACTAGTACTGCTAATATGC+CGG | - | Chr1:16570903-16570922 | MsG0180001147.01.T01:intron | 40.0% | |
| CACTCTTGATGTCAAGTTCA+TGG | - | Chr1:16570501-16570520 | MsG0180001147.01.T01:CDS | 40.0% | |
| CATCCTCAGATTTCTTGTTG+AGG | + | Chr1:16570843-16570862 | None:intergenic | 40.0% | |
| CTTATCTGCAGCTTCAAACA+GGG | - | Chr1:16569605-16569624 | MsG0180001147.01.T01:CDS | 40.0% | |
| GAACAAACAATGGAAGGAAG+TGG | + | Chr1:16568707-16568726 | None:intergenic | 40.0% | |
| GAGTTACTCACTGTTATCCT+TGG | + | Chr1:16570936-16570955 | None:intergenic | 40.0% | |
| GCAGAGACTTTGTTCAAGAA+GGG | + | Chr1:16568270-16568289 | None:intergenic | 40.0% | |
| TCTTTCAAACACGATGGACA+AGG | - | Chr1:16568741-16568760 | MsG0180001147.01.T01:intron | 40.0% | |
| TGCACAAATGCCGAATTCAA+CGG | - | Chr1:16570861-16570880 | MsG0180001147.01.T01:intron | 40.0% | |
| TTACATACCTGATGGAACCA+TGG | + | Chr1:16569883-16569902 | None:intergenic | 40.0% | |
| TTTGGAGAGCTTATCGAATC+AGG | - | Chr1:16569301-16569320 | MsG0180001147.01.T01:intron | 40.0% | |
| TTTGTTGGGCAACCCTTTAT+TGG | - | Chr1:16570474-16570493 | MsG0180001147.01.T01:CDS | 40.0% | |
| ! | AAGGGTTGCCCAACAAATTT+TGG | + | Chr1:16570471-16570490 | None:intergenic | 40.0% |
| ! | ATTTTATGCAGCTATACCGC+AGG | - | Chr1:16570037-16570056 | MsG0180001147.01.T01:intron | 40.0% |
| ! | GGATGCATCCTTTTGTAGTA+TGG | - | Chr1:16569975-16569994 | MsG0180001147.01.T01:intron | 40.0% |
| ! | TCCCTTTTTCCGTTATACTC+GGG | + | Chr1:16569474-16569493 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGTTGAACT+AGG | - | Chr1:16570307-16570326 | MsG0180001147.01.T01:CDS | 40.0% |
| !! | GTGGTTGCATTGACTACTTT+GGG | + | Chr1:16569861-16569880 | None:intergenic | 40.0% |
| !! | TGTTATCCTTGGTTTGCTAC+CGG | + | Chr1:16570925-16570944 | None:intergenic | 40.0% |
| !!! | AGCATCATTGGCTCGATTTT+TGG | - | Chr1:16570067-16570086 | MsG0180001147.01.T01:intron | 40.0% |
| AAGCAGATGTGGTAGGAGTA+GGG | + | Chr1:16569824-16569843 | None:intergenic | 45.0% | |
| AATATGCCGGTAGCAAACCA+AGG | - | Chr1:16570916-16570935 | MsG0180001147.01.T01:intron | 45.0% | |
| ACGATCGGAAGAACTGAATG+AGG | + | Chr1:16568981-16569000 | None:intergenic | 45.0% | |
| ACTTCCAGCCAACAACATGA+TGG | + | Chr1:16569583-16569602 | None:intergenic | 45.0% | |
| ACTTTGCAAGCAGATGTGGT+AGG | + | Chr1:16569831-16569850 | None:intergenic | 45.0% | |
| AGTAGTCAATGCAACCACCA+TGG | - | Chr1:16569863-16569882 | MsG0180001147.01.T01:CDS | 45.0% | |
| ATCGAGCCAATGATGCTTTG+CGG | + | Chr1:16570064-16570083 | None:intergenic | 45.0% | |
| CAAACAAGGCCCGAGTATAA+CGG | - | Chr1:16569462-16569481 | MsG0180001147.01.T01:intron | 45.0% | |
| CACAACTTTGCAAGCAGATG+TGG | + | Chr1:16569835-16569854 | None:intergenic | 45.0% | |
| CACAGTACCGCCATAAAACA+TGG | + | Chr1:16569157-16569176 | None:intergenic | 45.0% | |
| CATTCAGTTCTTCCGATCGT+TGG | - | Chr1:16568981-16569000 | MsG0180001147.01.T01:intron | 45.0% | |
| CGGCATATTAGCAGTACTAG+TGG | + | Chr1:16570905-16570924 | None:intergenic | 45.0% | |
| CTTGAAATACCAGAGCATGG+TGG | + | Chr1:16569711-16569730 | None:intergenic | 45.0% | |
| GCACAAATGCCGAATTCAAC+GGG | - | Chr1:16570862-16570881 | MsG0180001147.01.T01:intron | 45.0% | |
| GCATGCATCACCTTACAAGT+CGG | - | Chr1:16570387-16570406 | MsG0180001147.01.T01:intron | 45.0% | |
| GCTTATCTGCAGCTTCAAAC+AGG | - | Chr1:16569604-16569623 | MsG0180001147.01.T01:CDS | 45.0% | |
| GGACTTGAAATACCAGAGCA+TGG | + | Chr1:16569714-16569733 | None:intergenic | 45.0% | |
| TCAAGTTCATGGTGTGACGA+GGG | - | Chr1:16570512-16570531 | MsG0180001147.01.T01:CDS | 45.0% | |
| TTCAAACACGATGGACAAGG+TGG | - | Chr1:16568744-16568763 | MsG0180001147.01.T01:intron | 45.0% | |
| ! | AACATGGTAAGTTGAGGAGC+AGG | + | Chr1:16569141-16569160 | None:intergenic | 45.0% |
| ! | ACCTTACAAGTCGGCTTTGT+AGG | - | Chr1:16570396-16570415 | MsG0180001147.01.T01:intron | 45.0% |
| ! | ATCATGTTGTTGGCTGGAAG+TGG | - | Chr1:16569582-16569601 | MsG0180001147.01.T01:intron | 45.0% |
| ! | CCTTACAAGTCGGCTTTGTA+GGG | - | Chr1:16570397-16570416 | MsG0180001147.01.T01:intron | 45.0% |
| ! | GCCCGAGTATAACGGAAAAA+GGG | - | Chr1:16569470-16569489 | MsG0180001147.01.T01:intron | 45.0% |
| ! | TCTAGCTCGAAATTCGCATC+AGG | - | Chr1:16569648-16569667 | MsG0180001147.01.T01:CDS | 45.0% |
| !! | ACCTTACAAGCCGGTTTTGT+GGG | - | Chr1:16570296-16570315 | MsG0180001147.01.T01:CDS | 45.0% |
| !! | ACTGAATGAGGTGCTGTAAG+CGG | + | Chr1:16568969-16568988 | None:intergenic | 45.0% |
| !! | CACGTCCATAAGCTGTTTTC+AGG | - | Chr1:16569330-16569349 | MsG0180001147.01.T01:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | Chr1:16570300-16570319 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | Chr1:16570297-16570316 | MsG0180001147.01.T01:CDS | 45.0% |
| !! | GGTGGTTGCATTGACTACTT+TGG | + | Chr1:16569862-16569881 | None:intergenic | 45.0% |
| !! | TCGATTTTTGGAGAAGCGCA+AGG | - | Chr1:16570079-16570098 | MsG0180001147.01.T01:intron | 45.0% |
| !! | TTGCTGGTTTGGTTGAACCA+TGG | - | Chr1:16569009-16569028 | MsG0180001147.01.T01:intron | 45.0% |
| !! | TTTTGGAGAAGCGCAAGGAA+AGG | - | Chr1:16570084-16570103 | MsG0180001147.01.T01:intron | 45.0% |
| AACGGGTGCTAACATCTCTG+CGG | - | Chr1:16570879-16570898 | MsG0180001147.01.T01:intron | 50.0% | |
| CAAGCAGATGTGGTAGGAGT+AGG | + | Chr1:16569825-16569844 | None:intergenic | 50.0% | |
| CAAGCCATCATGTTGTTGGC+TGG | - | Chr1:16569576-16569595 | MsG0180001147.01.T01:intron | 50.0% | |
| CATACCTGATGGAACCATGG+TGG | + | Chr1:16569880-16569899 | None:intergenic | 50.0% | |
| CCAACTCAACCCCACAAAAC+CGG | + | Chr1:16570614-16570633 | None:intergenic | 50.0% | |
| CCAGCAACAGTACCAACGAT+CGG | + | Chr1:16568996-16569015 | None:intergenic | 50.0% | |
| GAGCATGGTGGTATGTCTAC+AGG | + | Chr1:16569699-16569718 | None:intergenic | 50.0% | |
| GAGCTAGATGCCTGAACTTC+AGG | + | Chr1:16569636-16569655 | None:intergenic | 50.0% | |
| GAGTCACACACCTTACAAGC+CGG | - | Chr1:16570592-16570611 | MsG0180001147.01.T01:CDS | 50.0% | |
| GCGAAGCAATCACTACTTGG+TGG | - | Chr1:16568939-16568958 | MsG0180001147.01.T01:intron | 50.0% | |
| GGCACAAGCCATCATGTTGT+TGG | - | Chr1:16569572-16569591 | MsG0180001147.01.T01:intron | 50.0% | |
| GTAGACATACCACCATGCTC+TGG | - | Chr1:16569699-16569718 | MsG0180001147.01.T01:CDS | 50.0% | |
| GTCAAGTTCATGGTGTGACG+AGG | - | Chr1:16570511-16570530 | MsG0180001147.01.T01:CDS | 50.0% | |
| TCGAGCCAATGATGCTTTGC+GGG | + | Chr1:16570063-16570082 | None:intergenic | 50.0% | |
| ! | CGGCTTTGTAGGGTTGAGTT+AGG | - | Chr1:16570407-16570426 | MsG0180001147.01.T01:intron | 50.0% |
| ! | CGTTGGTACTGTTGCTGGTT+TGG | - | Chr1:16568998-16569017 | MsG0180001147.01.T01:intron | 50.0% |
| ! | GGCCCGAGTATAACGGAAAA+AGG | - | Chr1:16569469-16569488 | MsG0180001147.01.T01:intron | 50.0% |
| !! | CACCTTACAAGCCGGTTTTG+TGG | - | Chr1:16570295-16570314 | MsG0180001147.01.T01:CDS | 50.0% |
| !! | CCCTACAAAGCCGACTTGTA+AGG | + | Chr1:16570400-16570419 | None:intergenic | 50.0% |
| !! | CCTTACAAGCCGGTTTTGTG+GGG | - | Chr1:16570602-16570621 | MsG0180001147.01.T01:CDS | 50.0% |
| !! | CGGTTTTGTGGGGTTGAGTT+GGG | - | Chr1:16570612-16570631 | MsG0180001147.01.T01:CDS | 50.0% |
| !! | CGTTATACTCGGGCCTTGTT+TGG | + | Chr1:16569464-16569483 | None:intergenic | 50.0% |
| AATGATGCTTTGCGGGCCTG+CGG | + | Chr1:16570056-16570075 | None:intergenic | 55.0% | |
| AGTTGAGGAGCAGGTGCAGA+TGG | + | Chr1:16569132-16569151 | None:intergenic | 55.0% | |
| CAGGGCTCAACCTGAAGTTC+AGG | - | Chr1:16569623-16569642 | MsG0180001147.01.T01:CDS | 55.0% | |
| CCGATCGTTGGTACTGTTGC+TGG | - | Chr1:16568993-16569012 | MsG0180001147.01.T01:intron | 55.0% | |
| GCAACCACCATGGTTCCATC+AGG | - | Chr1:16569873-16569892 | MsG0180001147.01.T01:CDS | 55.0% | |
| GGACTCGAGCGTGAGTAGAT+AGG | - | Chr1:16568497-16568516 | MsG0180001147.01.T01:three_prime_UTR | 55.0% | |
| !! | CCCCACAAAACCGGCTTGTA+AGG | + | Chr1:16570605-16570624 | None:intergenic | 55.0% |
| !! | CCGGTTTTGTGGGGTTGAGT+TGG | - | Chr1:16570611-16570630 | MsG0180001147.01.T01:CDS | 55.0% |
| CACACACTGGTCCACAGCCA+GGG | - | Chr1:16569748-16569767 | MsG0180001147.01.T01:CDS | 60.0% | |
| TCACACACTGGTCCACAGCC+AGG | - | Chr1:16569747-16569766 | MsG0180001147.01.T01:CDS | 60.0% | |
| ! | CTGCTACTTGAGCCACTCCC+TGG | + | Chr1:16569768-16569787 | None:intergenic | 60.0% |
| ! | GCAGGCCCGCAAAGCATCAT+TGG | - | Chr1:16570055-16570074 | MsG0180001147.01.T01:intron | 60.0% |
| ACTGGTCCACAGCCAGGGAG+TGG | - | Chr1:16569753-16569772 | MsG0180001147.01.T01:CDS | 65.0% | |
| CTTGAGCCACTCCCTGGCTG+TGG | + | Chr1:16569762-16569781 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 16568213 | 16571283 | 16568213 | ID=MsG0180001147.01;Name=MsG0180001147.01 |
| Chr1 | mRNA | 16568213 | 16571283 | 16568213 | ID=MsG0180001147.01.T01;Parent=MsG0180001147.01;Name=MsG0180001147.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0.8|0.66|1|1|1|6|341|327 |
| Chr1 | exon | 16568213 | 16568680 | 16568213 | ID=MsG0180001147.01.T01:exon:31447;Parent=MsG0180001147.01.T01 |
| Chr1 | exon | 16569391 | 16569448 | 16569391 | ID=MsG0180001147.01.T01:exon:31446;Parent=MsG0180001147.01.T01 |
| Chr1 | exon | 16569602 | 16569923 | 16569602 | ID=MsG0180001147.01.T01:exon:31445;Parent=MsG0180001147.01.T01 |
| Chr1 | exon | 16570290 | 16570374 | 16570290 | ID=MsG0180001147.01.T01:exon:31444;Parent=MsG0180001147.01.T01 |
| Chr1 | exon | 16570466 | 16570707 | 16570466 | ID=MsG0180001147.01.T01:exon:31443;Parent=MsG0180001147.01.T01 |
| Chr1 | exon | 16571134 | 16571283 | 16571134 | ID=MsG0180001147.01.T01:exon:31442;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16571134 | 16571283 | 16571134 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16570466 | 16570707 | 16570466 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16570290 | 16570374 | 16570290 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16569602 | 16569923 | 16569602 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16569391 | 16569448 | 16569391 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | CDS | 16568554 | 16568680 | 16568554 | ID=MsG0180001147.01.T01:cds;Parent=MsG0180001147.01.T01 |
| Chr1 | three_prime_UTR | 16568213 | 16568553 | 16568213 | ID=MsG0180001147.01.T01:three_prime_utr;Parent=MsG0180001147.01.T01 |
| Gene Sequence |
| Protein sequence |
