AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010163.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010163.01.T01 MTR_2g078700 97.321 224 6 0 28 251 13 236 2.00e-162 455
MsG0280010163.01.T01 MTR_4g108760 66.667 207 47 3 38 244 17 201 7.63e-92 275
MsG0280010163.01.T01 MTR_3g435150 63.256 215 57 3 38 252 16 208 8.06e-91 271
MsG0280010163.01.T01 MTR_6g012670 58.036 224 68 3 37 260 19 216 1.69e-85 258
MsG0280010163.01.T01 MTR_7g085260 59.361 219 69 4 38 254 17 217 3.57e-83 254
MsG0280010163.01.T01 MTR_6g032770 68.519 162 51 0 38 199 18 179 7.40e-83 253
MsG0280010163.01.T01 MTR_3g109340 58.373 209 82 2 38 245 22 226 7.63e-83 252
MsG0280010163.01.T01 MTR_1g008740 69.277 166 47 2 27 191 2 164 1.37e-82 251
MsG0280010163.01.T01 MTR_1g008740 69.277 166 47 2 27 191 16 178 1.51e-82 252
MsG0280010163.01.T01 MTR_6g084430 74.522 157 34 3 35 191 2 152 1.93e-82 250
MsG0280010163.01.T01 MTR_3g109340 57.895 209 84 2 38 245 22 227 4.00e-82 250
MsG0280010163.01.T01 MTR_3g070030 55.411 231 83 4 29 258 10 221 7.88e-82 249
MsG0280010163.01.T01 MTR_7g011130 53.571 252 81 6 25 259 3 235 2.05e-78 241
MsG0280010163.01.T01 MTR_7g011120 66.471 170 48 2 33 195 3 170 5.35e-75 231
MsG0280010163.01.T01 MTR_3g116070 73.103 145 35 2 38 181 23 164 5.68e-73 227
MsG0280010163.01.T01 MTR_3g070040 50.000 228 90 6 33 258 3 208 4.77e-65 206
MsG0280010163.01.T01 MTR_2g064470 62.420 157 54 3 35 191 8 159 1.98e-64 203
MsG0280010163.01.T01 MTR_1g069805 55.556 162 66 1 36 197 8 163 7.04e-63 199
MsG0280010163.01.T01 MTR_4g035590 58.642 162 57 3 34 192 4 158 3.43e-61 197
MsG0280010163.01.T01 MTR_4g101680 56.707 164 62 3 33 193 2 159 3.71e-60 194
MsG0280010163.01.T01 MTR_7g097090 56.494 154 61 1 36 189 8 155 8.26e-60 191
MsG0280010163.01.T01 MTR_4g036030 54.878 164 65 3 33 193 2 159 9.55e-60 192
MsG0280010163.01.T01 MTR_4g089135 51.667 180 66 3 37 195 14 193 1.94e-58 189
MsG0280010163.01.T01 MTR_2g062730 55.346 159 63 3 38 193 10 163 2.21e-58 189
MsG0280010163.01.T01 MTR_2g064090 59.615 156 58 3 38 191 6 158 2.83e-58 189
MsG0280010163.01.T01 MTR_5g012080 54.658 161 66 3 33 190 2 158 6.50e-58 188
MsG0280010163.01.T01 MTR_7g085220 51.397 179 78 2 37 206 7 185 7.15e-58 187
MsG0280010163.01.T01 MTR_5g021710 50.000 176 73 4 32 201 2 168 8.44e-58 188
MsG0280010163.01.T01 MTR_8g024480 51.765 170 70 4 33 192 10 177 8.87e-58 190
MsG0280010163.01.T01 MTR_5g041940 53.797 158 69 2 37 192 2 157 1.01e-57 185
MsG0280010163.01.T01 MTR_7g100990 56.173 162 69 1 31 190 4 165 1.21e-57 187
MsG0280010163.01.T01 MTR_6g477900 49.231 195 88 5 34 225 2 188 1.29e-57 184
MsG0280010163.01.T01 MTR_2g080010 53.614 166 68 1 37 193 14 179 3.33e-57 186
MsG0280010163.01.T01 MTR_2157s0010 54.938 162 65 3 38 191 8 169 4.01e-57 183
MsG0280010163.01.T01 MTR_8g059170 55.000 160 70 1 34 193 10 167 8.55e-56 182
MsG0280010163.01.T01 MTR_2g093810 53.939 165 74 1 28 190 4 168 8.66e-56 182
MsG0280010163.01.T01 MTR_4g081870 52.795 161 72 2 36 194 7 165 1.25e-55 180
MsG0280010163.01.T01 MTR_3g088110 54.938 162 67 3 34 193 3 160 1.30e-55 180
MsG0280010163.01.T01 MTR_7g005280 51.462 171 74 3 33 201 10 173 3.00e-55 178
MsG0280010163.01.T01 MTR_5g076850 47.442 215 100 4 38 250 6 209 1.95e-54 186
MsG0280010163.01.T01 MTR_8g076110 49.701 167 69 4 38 198 6 163 3.02e-54 177
MsG0280010163.01.T01 MTR_2g079990 55.000 160 60 3 38 193 16 167 3.96e-54 178
MsG0280010163.01.T01 MTR_3g064580 57.692 156 61 4 38 191 6 158 1.43e-53 184
MsG0280010163.01.T01 MTR_5g014300 47.291 203 89 5 36 230 4 196 4.81e-53 175
MsG0280010163.01.T01 MTR_8g094580 54.140 157 63 3 38 190 7 158 1.34e-52 172
MsG0280010163.01.T01 MTR_2g079990 48.901 182 65 3 38 193 16 195 1.65e-52 175
MsG0280010163.01.T01 MTR_6g011860 51.515 165 68 3 38 193 15 176 2.34e-52 175
MsG0280010163.01.T01 MTR_8g467490 50.000 160 73 1 40 192 16 175 4.10e-52 174
MsG0280010163.01.T01 MTR_3g096920 52.532 158 71 2 34 190 3 157 8.05e-52 171
MsG0280010163.01.T01 MTR_1g096430 50.314 159 64 4 38 190 7 156 9.51e-52 172
MsG0280010163.01.T01 MTR_5g040420 46.552 174 87 2 26 193 2 175 2.26e-51 172
MsG0280010163.01.T01 MTR_3g096140 52.500 160 68 4 38 194 7 161 4.48e-50 166
MsG0280010163.01.T01 MTR_3g096140 53.165 158 66 4 40 194 9 161 3.03e-49 166
MsG0280010163.01.T01 MTR_3g096920 58.333 132 52 1 34 165 3 131 3.07e-49 165
MsG0280010163.01.T01 MTR_4g098630 42.241 232 103 8 36 244 4 227 5.84e-49 164
MsG0280010163.01.T01 MTR_4g134460 51.316 152 69 2 40 191 56 202 1.05e-47 164
MsG0280010163.01.T01 MTR_5g069030 46.632 193 80 5 38 216 25 208 6.70e-47 165
MsG0280010163.01.T01 MTR_0036s0150 51.875 160 65 5 40 194 7 159 7.61e-47 164
MsG0280010163.01.T01 MTR_1g097300 51.266 158 69 4 40 194 21 173 7.88e-47 164
MsG0280010163.01.T01 MTR_5g090970 39.535 215 119 4 27 233 7 218 1.74e-46 157
MsG0280010163.01.T01 MTR_3g093050 46.154 195 82 5 38 218 22 207 2.94e-46 163
MsG0280010163.01.T01 MTR_3g093050 46.154 195 82 5 38 218 22 207 4.17e-46 163
MsG0280010163.01.T01 MTR_8g063550 48.750 160 74 4 38 194 6 160 5.24e-46 157
MsG0280010163.01.T01 MTR_1g090720 50.920 163 72 3 38 194 42 202 5.50e-46 160
MsG0280010163.01.T01 MTR_3g093040 47.486 179 71 5 38 202 108 277 1.14e-45 155
MsG0280010163.01.T01 MTR_8g063550 48.428 159 76 3 38 194 6 160 1.81e-45 158
MsG0280010163.01.T01 MTR_8g063550 48.750 160 74 4 38 194 6 160 3.36e-45 157
MsG0280010163.01.T01 MTR_1g090723 49.375 160 69 5 40 194 10 162 4.68e-45 159
MsG0280010163.01.T01 MTR_1g090723 49.375 160 69 5 40 194 10 162 5.88e-45 160
MsG0280010163.01.T01 MTR_1g090723 50.000 160 69 5 40 194 10 163 6.98e-45 159
MsG0280010163.01.T01 MTR_5g090970 39.535 215 118 5 27 233 7 217 1.37e-44 152
MsG0280010163.01.T01 MTR_8g093580 47.500 160 76 4 38 194 6 160 7.75e-44 155
MsG0280010163.01.T01 MTR_2g086880 49.677 155 64 4 40 193 20 161 6.44e-43 153
MsG0280010163.01.T01 MTR_2g086880 49.677 155 64 4 40 193 20 161 1.43e-42 153
MsG0280010163.01.T01 MTR_2g068880 51.825 137 62 3 33 165 16 152 9.70e-42 145
MsG0280010163.01.T01 MTR_2g068920 52.206 136 61 3 34 165 16 151 2.49e-41 144
MsG0280010163.01.T01 MTR_4g075980 51.969 127 60 1 40 165 17 143 5.50e-41 143
MsG0280010163.01.T01 MTR_8g099750 41.818 165 91 2 33 194 9 171 1.73e-40 139
MsG0280010163.01.T01 MTR_3g096140 50.694 144 63 4 54 194 2 140 1.47e-39 140
MsG0280010163.01.T01 MTR_8g023840 54.264 129 55 3 38 163 11 138 8.37e-39 139
MsG0280010163.01.T01 MTR_3g098810 43.023 172 88 5 33 196 9 178 1.85e-37 132
MsG0280010163.01.T01 MTR_8g023860 50.000 130 61 3 37 163 11 139 1.94e-35 131
MsG0280010163.01.T01 MTR_3g098810 45.185 135 70 2 33 165 9 141 4.09e-35 124
MsG0280010163.01.T01 MTR_4g052620 46.970 132 64 3 38 164 5 135 7.16e-35 126
MsG0280010163.01.T01 MTR_2g086690 44.697 132 66 3 39 164 5 135 9.11e-33 120
MsG0280010163.01.T01 MTR_8g023900 35.749 207 104 5 38 241 12 192 2.05e-31 121
MsG0280010163.01.T01 MTR_8g023900 40.523 153 80 4 41 190 196 340 5.83e-29 114
MsG0280010163.01.T01 MTR_8g094580 54.630 108 40 3 87 190 2 104 5.01e-31 115
MsG0280010163.01.T01 MTR_6g059440 94.444 72 3 1 179 250 38 108 2.03e-30 112
MsG0280010163.01.T01 MTR_8g023930 35.450 189 111 5 38 223 24 204 1.03e-29 116
MsG0280010163.01.T01 MTR_7g105170 39.024 164 90 6 37 191 3 165 1.67e-29 112
MsG0280010163.01.T01 MTR_8g023880 40.588 170 72 7 38 190 7 164 1.83e-29 112
MsG0280010163.01.T01 MTR_4g094302 35.928 167 92 3 38 197 11 169 4.57e-29 108
MsG0280010163.01.T01 MTR_4g094302 40.625 128 68 1 38 165 11 130 1.32e-28 107
MsG0280010163.01.T01 MTR_7g070140 56.000 75 33 0 91 165 17 91 2.52e-25 97.8
MsG0280010163.01.T01 MTR_8g093790 37.267 161 69 6 34 190 6 138 6.60e-21 87.4
MsG0280010163.01.T01 MTR_7g083360 33.835 133 82 5 33 163 5 133 1.09e-19 83.6
MsG0280010163.01.T01 MTR_3g096400 35.583 163 85 7 38 189 7 160 2.51e-19 84.0
MsG0280010163.01.T01 MTR_7g083330 34.375 128 78 5 38 163 18 141 3.07e-17 77.8
MsG0280010163.01.T01 MTR_7g083370 33.333 135 80 5 33 163 5 133 4.93e-17 75.9
MsG0280010163.01.T01 MTR_4g088245 31.217 189 99 8 38 205 68 246 1.46e-13 69.7
MsG0280010163.01.T01 MTR_7g070150 47.541 61 27 1 130 190 2 57 8.99e-13 63.2
MsG0280010163.01.T01 MTR_2g014680 29.412 204 114 10 38 222 53 245 3.21e-12 65.9
MsG0280010163.01.T01 MTR_4g078875 32.877 146 76 6 38 165 48 189 1.04e-11 63.9
MsG0280010163.01.T01 MTR_4g097490 100.000 28 0 0 223 250 1 28 1.87e-11 60.8
MsG0280010163.01.T01 MTR_1g102520 100.000 28 0 0 223 250 1 28 4.07e-11 58.9
MsG0280010163.01.T01 MTR_5g039560 96.552 29 1 0 223 251 1 29 5.99e-11 60.8
MsG0280010163.01.T01 MTR_8g069160 31.944 144 79 5 38 165 68 208 7.11e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010163.01.T01 AT5G53950 72.381 210 45 3 22 220 3 210 4.12e-105 310
MsG0280010163.01.T01 AT3G15170 80.769 156 30 0 38 193 20 175 2.50e-93 277
MsG0280010163.01.T01 AT5G61430 68.421 209 44 4 38 246 16 202 3.89e-92 275
MsG0280010163.01.T01 AT5G07680 62.385 218 57 3 29 246 8 200 6.98e-90 269
MsG0280010163.01.T01 AT5G07680 64.593 209 49 3 38 246 3 186 9.77e-89 266
MsG0280010163.01.T01 AT5G18270 73.885 157 40 1 36 192 19 174 8.09e-86 259
MsG0280010163.01.T01 AT5G18270 73.248 157 41 1 36 192 19 174 1.32e-85 259
MsG0280010163.01.T01 AT5G39610 69.832 179 48 2 16 194 2 174 2.70e-84 253
MsG0280010163.01.T01 AT3G29035 58.009 231 61 3 16 246 2 196 2.11e-83 252
MsG0280010163.01.T01 AT2G24430 70.659 167 42 3 26 191 6 166 6.84e-83 251
MsG0280010163.01.T01 AT2G24430 70.659 167 42 3 26 191 6 166 6.84e-83 251
MsG0280010163.01.T01 AT3G18400 73.885 157 36 2 35 191 2 153 1.28e-82 250
MsG0280010163.01.T01 AT3G04060 60.976 205 63 4 38 242 20 207 1.35e-80 246
MsG0280010163.01.T01 AT1G76420 55.502 209 90 1 38 246 22 227 3.30e-78 239
MsG0280010163.01.T01 AT3G12977 55.814 172 71 3 35 205 15 182 1.67e-68 213
MsG0280010163.01.T01 AT4G10350 51.256 199 78 5 34 225 5 191 5.24e-62 198
MsG0280010163.01.T01 AT1G56010 57.055 163 64 4 35 194 16 175 1.86e-61 196
MsG0280010163.01.T01 AT5G61430 64.375 160 35 4 87 246 2 139 1.51e-60 192
MsG0280010163.01.T01 AT2G46770 47.549 204 89 5 33 220 11 212 1.43e-59 193
MsG0280010163.01.T01 AT1G12260 56.522 161 61 3 33 190 2 156 1.47e-59 192
MsG0280010163.01.T01 AT1G33280 52.571 175 73 3 34 205 4 171 1.53e-59 191
MsG0280010163.01.T01 AT1G12260 56.522 161 61 3 33 190 2 156 1.90e-59 193
MsG0280010163.01.T01 AT4G28530 44.444 225 91 4 38 246 10 216 2.77e-58 189
MsG0280010163.01.T01 AT1G62700 56.098 164 57 4 33 190 2 156 5.29e-58 189
MsG0280010163.01.T01 AT1G62700 56.098 164 57 4 33 190 2 156 5.29e-58 189
MsG0280010163.01.T01 AT2G18060 50.575 174 71 4 38 205 9 173 1.28e-57 188
MsG0280010163.01.T01 AT2G18060 50.575 174 71 4 38 205 9 173 1.28e-57 188
MsG0280010163.01.T01 AT5G62380 47.087 206 91 5 36 232 5 201 1.76e-57 187
MsG0280010163.01.T01 AT5G62380 47.087 206 91 5 36 232 5 201 1.76e-57 187
MsG0280010163.01.T01 AT3G04070 51.705 176 77 2 38 205 10 185 4.48e-57 186
MsG0280010163.01.T01 AT3G04070 50.000 192 72 3 38 205 10 201 4.51e-57 186
MsG0280010163.01.T01 AT5G08790 55.758 165 63 3 34 193 3 162 2.42e-56 182
MsG0280010163.01.T01 AT3G61910 47.701 174 75 3 33 192 6 177 4.28e-56 183
MsG0280010163.01.T01 AT1G61110 50.000 188 74 5 16 193 3 180 7.72e-56 182
MsG0280010163.01.T01 AT5G66300 52.096 167 70 4 31 193 5 165 1.31e-55 181
MsG0280010163.01.T01 AT1G65910 51.832 191 81 5 38 226 6 187 1.52e-55 188
MsG0280010163.01.T01 AT1G79580 54.878 164 61 4 38 196 17 172 1.56e-55 182
MsG0280010163.01.T01 AT1G79580 54.878 164 61 4 38 196 17 172 1.56e-55 182
MsG0280010163.01.T01 AT1G79580 54.878 164 61 4 38 196 17 172 1.56e-55 182
MsG0280010163.01.T01 AT1G79580 54.878 164 61 4 38 196 17 172 1.56e-55 182
MsG0280010163.01.T01 AT1G79580 54.878 164 61 4 38 196 17 172 1.56e-55 182
MsG0280010163.01.T01 AT1G01720 56.410 156 63 2 37 190 6 158 4.08e-55 179
MsG0280010163.01.T01 AT1G71930 50.307 163 72 3 31 190 2 158 4.33e-55 180
MsG0280010163.01.T01 AT1G71930 50.307 163 72 3 31 190 2 158 4.33e-55 180
MsG0280010163.01.T01 AT3G17730 54.140 157 66 3 38 192 6 158 4.58e-55 177
MsG0280010163.01.T01 AT4G36160 50.286 175 71 5 38 205 10 175 4.68e-55 181
MsG0280010163.01.T01 AT4G36160 50.286 175 71 5 38 205 10 175 4.68e-55 181
MsG0280010163.01.T01 AT4G36160 50.286 175 71 5 38 205 14 179 4.89e-55 182
MsG0280010163.01.T01 AT5G63790 54.545 165 65 3 34 193 46 205 7.59e-55 179
MsG0280010163.01.T01 AT5G63790 54.545 165 65 3 34 193 56 215 8.72e-55 179
MsG0280010163.01.T01 AT4G27410 53.659 164 71 3 38 201 14 172 1.30e-54 178
MsG0280010163.01.T01 AT1G69490 54.375 160 67 3 34 190 5 161 1.47e-54 177
MsG0280010163.01.T01 AT1G77450 49.180 183 79 4 32 204 4 182 5.56e-54 175
MsG0280010163.01.T01 AT5G39820 48.663 187 75 3 27 192 7 193 6.20e-54 177
MsG0280010163.01.T01 AT1G32770 50.581 172 70 4 33 192 11 179 8.53e-54 178
MsG0280010163.01.T01 AT3G03200 57.419 155 61 3 38 190 6 157 9.09e-54 181
MsG0280010163.01.T01 AT5G46590 55.128 156 66 3 38 191 6 159 1.02e-53 176
MsG0280010163.01.T01 AT3G15500 52.326 172 72 3 38 206 14 178 1.08e-53 176
MsG0280010163.01.T01 AT1G54330 58.974 156 55 3 38 191 6 154 1.38e-53 176
MsG0280010163.01.T01 AT3G10500 53.374 163 62 4 38 194 9 163 1.50e-53 182
MsG0280010163.01.T01 AT5G04410 54.717 159 66 3 38 194 9 163 1.54e-53 182
MsG0280010163.01.T01 AT3G10480 53.933 178 73 4 21 194 10 182 3.20e-53 179
MsG0280010163.01.T01 AT5G46590 60.769 130 48 2 38 165 6 134 3.29e-53 174
MsG0280010163.01.T01 AT1G52890 54.717 159 62 3 38 193 14 165 5.75e-53 174
MsG0280010163.01.T01 AT3G10480 54.237 177 73 4 21 194 10 181 7.97e-53 177
MsG0280010163.01.T01 AT3G10490 51.149 174 80 3 23 194 12 182 2.68e-52 170
MsG0280010163.01.T01 AT5G17260 56.129 155 63 3 38 190 6 157 3.37e-52 177
MsG0280010163.01.T01 AT3G15510 52.795 161 67 3 42 193 21 181 3.80e-52 174
MsG0280010163.01.T01 AT1G26870 49.425 174 77 2 31 193 5 178 8.80e-52 174
MsG0280010163.01.T01 AT4G17980 51.923 156 73 1 38 191 6 161 9.11e-51 167
MsG0280010163.01.T01 AT4G17980 51.923 156 73 1 38 191 6 161 1.50e-50 167
MsG0280010163.01.T01 AT3G10490 51.149 174 80 3 23 194 12 182 1.96e-50 171
MsG0280010163.01.T01 AT4G27410 48.619 181 71 4 38 201 14 189 3.19e-50 167
MsG0280010163.01.T01 AT5G13180 48.466 163 78 2 33 195 9 165 3.58e-50 165
MsG0280010163.01.T01 AT4G35580 47.368 209 88 6 38 238 9 203 7.44e-50 171
MsG0280010163.01.T01 AT4G35580 47.368 209 88 6 38 238 9 203 1.04e-49 171
MsG0280010163.01.T01 AT4G35580 47.368 209 88 6 38 238 9 203 1.19e-49 171
MsG0280010163.01.T01 AT1G33060 54.194 155 65 3 38 190 24 174 3.19e-49 172
MsG0280010163.01.T01 AT1G33060 54.194 155 65 3 38 190 24 174 3.30e-49 172
MsG0280010163.01.T01 AT1G52880 51.875 160 69 2 42 193 21 180 1.05e-48 164
MsG0280010163.01.T01 AT3G10480 45.972 211 72 4 21 194 10 215 1.17e-48 168
MsG0280010163.01.T01 AT5G24590 49.112 169 71 4 36 197 11 171 2.30e-48 166
MsG0280010163.01.T01 AT2G02450 52.980 151 66 2 40 190 53 198 2.50e-48 164
MsG0280010163.01.T01 AT2G02450 52.980 151 66 2 40 190 53 198 3.39e-48 165
MsG0280010163.01.T01 AT2G33480 49.398 166 77 3 32 197 9 167 5.48e-48 160
MsG0280010163.01.T01 AT2G33480 49.398 166 75 3 32 197 9 165 1.23e-47 159
MsG0280010163.01.T01 AT1G34180 48.734 158 73 4 40 194 18 170 2.99e-46 160
MsG0280010163.01.T01 AT2G43000 39.801 201 110 4 40 232 20 217 4.32e-46 155
MsG0280010163.01.T01 AT1G32870 51.852 162 72 3 35 194 7 164 8.22e-46 160
MsG0280010163.01.T01 AT1G32870 51.852 162 72 3 35 194 7 164 8.34e-46 160
MsG0280010163.01.T01 AT1G34190 48.734 158 73 4 40 194 18 170 1.22e-45 160
MsG0280010163.01.T01 AT1G34180 48.734 158 73 4 40 194 18 170 1.32e-45 160
MsG0280010163.01.T01 AT1G32870 51.852 162 72 3 35 194 43 200 1.76e-45 160
MsG0280010163.01.T01 AT5G64060 45.342 161 80 4 37 194 5 160 6.25e-45 155
MsG0280010163.01.T01 AT3G49530 55.814 129 54 2 38 164 13 140 8.00e-45 155
MsG0280010163.01.T01 AT1G34180 45.294 170 73 4 40 194 18 182 1.97e-44 155
MsG0280010163.01.T01 AT3G49530 55.814 129 54 2 38 164 13 140 2.11e-44 156
MsG0280010163.01.T01 AT5G09330 45.625 160 81 3 37 194 5 160 3.46e-44 155
MsG0280010163.01.T01 AT5G09330 45.625 160 81 3 37 194 5 160 3.46e-44 155
MsG0280010163.01.T01 AT5G09330 45.625 160 81 3 37 194 5 160 3.46e-44 155
MsG0280010163.01.T01 AT5G09330 45.625 160 81 3 37 194 5 160 3.46e-44 155
MsG0280010163.01.T01 AT5G09330 45.625 160 81 3 37 194 5 160 3.46e-44 155
MsG0280010163.01.T01 AT1G32510 42.857 196 96 4 38 226 6 192 7.35e-44 150
MsG0280010163.01.T01 AT3G12977 58.065 124 47 3 83 205 10 129 7.78e-44 148
MsG0280010163.01.T01 AT1G34180 45.294 170 73 4 40 194 18 182 8.95e-44 156
MsG0280010163.01.T01 AT2G27300 52.672 131 59 2 38 167 14 142 4.57e-43 149
MsG0280010163.01.T01 AT2G17040 52.756 127 59 1 40 165 8 134 9.61e-43 147
MsG0280010163.01.T01 AT3G12910 47.619 147 73 3 22 165 5 150 9.19e-41 142
MsG0280010163.01.T01 AT1G56010 60.909 110 38 3 87 194 2 108 3.22e-39 137
MsG0280010163.01.T01 AT5G22290 38.251 183 102 3 40 221 23 195 4.07e-39 139
MsG0280010163.01.T01 AT4G10350 48.667 150 58 5 83 225 7 144 4.23e-38 135
MsG0280010163.01.T01 AT3G44290 43.478 161 78 4 40 199 16 164 5.80e-38 133
MsG0280010163.01.T01 AT5G04395 42.857 161 78 2 19 165 9 169 1.43e-37 131
MsG0280010163.01.T01 AT4G28530 50.000 128 48 1 38 149 10 137 1.64e-37 134
MsG0280010163.01.T01 AT3G44290 43.478 161 78 4 40 199 16 164 3.24e-37 134
MsG0280010163.01.T01 AT2G33480 50.467 107 49 2 91 197 8 110 3.75e-28 107
MsG0280010163.01.T01 AT5G64530 41.406 128 63 2 38 165 3 118 6.54e-27 102
MsG0280010163.01.T01 AT5G64530 41.406 128 63 2 38 165 3 118 1.91e-26 102
MsG0280010163.01.T01 AT4G01550 38.994 159 86 5 41 195 7 158 2.31e-26 107
MsG0280010163.01.T01 AT3G04420 41.860 129 69 3 39 163 4 130 6.67e-26 103
MsG0280010163.01.T01 AT1G02230 38.028 142 80 4 39 175 4 142 1.11e-25 103
MsG0280010163.01.T01 AT3G04420 41.860 129 69 3 39 163 4 130 1.16e-25 103
MsG0280010163.01.T01 AT5G22380 42.636 129 67 4 41 163 8 135 7.25e-25 99.4
MsG0280010163.01.T01 AT3G44350 34.568 162 99 4 37 193 4 163 7.26e-25 99.4
MsG0280010163.01.T01 AT4G01520 40.152 132 74 4 39 165 5 136 8.60e-25 100
MsG0280010163.01.T01 AT3G44350 38.346 133 76 3 37 164 4 135 1.90e-24 96.3
MsG0280010163.01.T01 AT4G01540 40.769 130 72 4 41 165 7 136 1.22e-23 99.0
MsG0280010163.01.T01 AT4G01540 40.769 130 72 4 41 165 7 136 1.31e-23 99.0
MsG0280010163.01.T01 AT4G01540 40.769 130 72 4 41 165 7 136 1.73e-23 99.4
MsG0280010163.01.T01 AT4G01540 40.769 130 72 4 41 165 7 136 1.98e-23 98.6
MsG0280010163.01.T01 AT1G02250 39.231 130 71 4 39 163 4 130 4.29e-23 97.1
MsG0280010163.01.T01 AT3G10490 55.952 84 34 2 111 194 2 82 2.13e-22 94.7
MsG0280010163.01.T01 AT3G10490 55.952 84 34 2 111 194 2 82 2.13e-22 94.7
MsG0280010163.01.T01 AT2G18060 49.462 93 35 4 116 205 2 85 2.83e-21 90.5
MsG0280010163.01.T01 AT1G02220 39.535 129 69 4 39 163 4 127 3.79e-21 92.0
MsG0280010163.01.T01 AT1G01010 35.152 165 88 7 41 195 6 161 5.77e-19 85.9
MsG0280010163.01.T01 AT2G43000 41.304 92 51 2 99 190 1 89 2.13e-18 81.3
MsG0280010163.01.T01 AT5G14000 33.537 164 96 5 33 193 10 163 6.37e-18 80.1
MsG0280010163.01.T01 AT5G14000 36.232 138 80 4 33 167 10 142 7.00e-17 75.9
MsG0280010163.01.T01 AT5G50820 33.553 152 73 6 25 165 4 138 1.70e-16 75.9
MsG0280010163.01.T01 AT3G56530 32.576 132 84 3 38 166 52 181 1.15e-14 72.8
MsG0280010163.01.T01 AT5G22290 36.893 103 55 2 117 219 2 94 1.40e-14 71.6
MsG0280010163.01.T01 AT3G04430 34.091 132 73 5 44 163 6 135 6.26e-13 66.2
MsG0280010163.01.T01 AT1G28470 34.911 169 81 9 38 188 77 234 1.22e-12 67.0
MsG0280010163.01.T01 AT4G28500 28.636 220 125 9 4 205 29 234 1.93e-11 63.5
MsG0280010163.01.T01 AT3G01600 34.000 150 77 6 38 168 55 201 2.33e-11 63.5
MsG0280010163.01.T01 AT5G14490 29.560 159 89 6 38 176 55 210 2.82e-11 63.2
MsG0280010163.01.T01 AT5G14490 29.560 159 89 6 38 176 58 213 2.96e-11 63.2
MsG0280010163.01.T01 AT5G14490 29.560 159 89 6 38 176 58 213 4.30e-11 62.8
MsG0280010163.01.T01 AT5G14490 29.560 159 89 6 38 176 55 210 5.89e-11 62.0

Find 62 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGAGTTTGAGGCTATTT+TGG 0.142515 2:-65474351 None:intergenic
GAGCAACAGAAGCTGGTTAT+TGG 0.282927 2:+65473432 MsG0280010163.01.T01:CDS
TGAACCAAGTTCACCTTCTT+CGG 0.335807 2:+65474400 MsG0280010163.01.T01:CDS
AAGACTCATGCTGTTGTTGC+TGG 0.361273 2:-65474372 None:intergenic
CAAAAGAGTAACACTGGAAA+TGG 0.388031 2:+65474284 MsG0280010163.01.T01:CDS
TTGAATTCATGAAGGATGAA+TGG 0.403950 2:+65474243 MsG0280010163.01.T01:intron
TTACTACATGACCTGTCAAT+GGG 0.405447 2:-65470548 None:intergenic
GAATTACCATGATAGTTAGT+AGG 0.410761 2:-65470573 None:intergenic
TTTAACAGAGAAAGCTAAGA+TGG 0.413101 2:+65473343 MsG0280010163.01.T01:intron
CGGGTGCTAGCTGCGGTGTA+AGG 0.436419 2:-65474452 None:intergenic
GCTGGTTATTGGAAAGCAAC+TGG 0.441483 2:+65473443 MsG0280010163.01.T01:CDS
GAAGAAGGTGAACTTGGTTC+AGG 0.456980 2:-65474398 None:intergenic
TGAATTCATGAAGGATGAAT+GGG 0.460212 2:+65474244 MsG0280010163.01.T01:intron
CTAAGATGGGTGAGAAAGAA+TGG 0.473003 2:+65473357 MsG0280010163.01.T01:CDS
GTTGTTGCTGGCTGAGTTTG+AGG 0.477482 2:-65474360 None:intergenic
GTGATGAGTTCTTCATCTGT+TGG 0.479915 2:-65473151 None:intergenic
TGATGAGTTCTTCATCTGTT+GGG 0.481156 2:-65473150 None:intergenic
CTCTACCTCTATAGAAAACA+AGG 0.487385 2:-65473523 None:intergenic
ACCACTTGTGGTGGCTGTCA+CGG 0.492729 2:-65474315 None:intergenic
ATGCATGAATACCGTCTTGA+AGG 0.495598 2:+65473575 MsG0280010163.01.T01:CDS
CGTGACAGAAAGTATCCAAC+TGG 0.496401 2:+65473395 MsG0280010163.01.T01:CDS
TATCAATCAACCCCATTGAC+AGG 0.499766 2:+65470537 MsG0280010163.01.T01:CDS
TTACTGTGTTGTTCATGTGA+TGG 0.513235 2:-65473085 None:intergenic
GGAGATGAATCAAGAAGAGG+TGG 0.516437 2:-65474431 None:intergenic
TTTACTACATGACCTGTCAA+TGG 0.518768 2:-65470549 None:intergenic
ACAAATAGAGCAACAGAAGC+TGG 0.519833 2:+65473425 MsG0280010163.01.T01:CDS
CTGTGTTGTTCATGTGATGG+TGG 0.521346 2:-65473082 None:intergenic
TTGTTCATGTGATGGTGGGA+TGG 0.523100 2:-65473077 None:intergenic
GTAAATCCTACTAACTATCA+TGG 0.530046 2:+65470567 MsG0280010163.01.T01:CDS
TAAACCGAAGAAGGTGAACT+TGG 0.530916 2:-65474404 None:intergenic
CTAGCACCCGCCACATTCAA+CGG 0.531130 2:+65474465 MsG0280010163.01.T01:CDS
GTTGAGATCAACTTCAGCTA+TGG 0.539738 2:-65473221 None:intergenic
GGTGGAAGGTAAACCGAAGA+AGG 0.552129 2:-65474413 None:intergenic
TAGTTACCAGGTAGCTCCCA+TGG 0.554498 2:-65473253 None:intergenic
CTATTTGTACGCAAACCAGT+TGG 0.564828 2:-65473410 None:intergenic
TGTGTTGTTCATGTGATGGT+GGG 0.567555 2:-65473081 None:intergenic
TGACCACCGTTGAATGTGGC+GGG 0.570436 2:-65474471 None:intergenic
TATGGCTCTTGCAGTGAAAG+TGG 0.573657 2:-65473203 None:intergenic
CATTTGACCACCGTTGAATG+TGG 0.575010 2:-65474475 None:intergenic
TGTGAACCATGGGAGCTACC+TGG 0.581438 2:+65473247 MsG0280010163.01.T01:CDS
TAAGGAGATGAATCAAGAAG+AGG 0.594247 2:-65474434 None:intergenic
TTAACAGAGAAAGCTAAGAT+GGG 0.599881 2:+65473344 MsG0280010163.01.T01:intron
AGTGATGCACATTTACCACC+TGG 0.600350 2:+65473115 MsG0280010163.01.T01:CDS
TCTCAACAAGTGTGAACCAT+GGG 0.603575 2:+65473237 MsG0280010163.01.T01:CDS
ATGAATCAAGAAGAGGTGGA+AGG 0.605273 2:-65474427 None:intergenic
GTGTTTCAAAAGAGTAACAC+TGG 0.613580 2:+65474278 MsG0280010163.01.T01:CDS
ACCGTGACAGCCACCACAAG+TGG 0.620040 2:+65474314 MsG0280010163.01.T01:CDS
GTTGGGTGGAAACGAAAACC+AGG 0.623151 2:-65473133 None:intergenic
AAGCAAATTTGCCTTCAAGA+CGG 0.624374 2:-65473586 None:intergenic
GTACCTTGGAGTTTCTAGAG+AGG 0.626435 2:-65473616 None:intergenic
TATAGAGGTAGAGCTCCTAA+AGG 0.627496 2:+65473533 MsG0280010163.01.T01:CDS
CTTCCTCTCTAGAAACTCCA+AGG 0.629367 2:+65473613 MsG0280010163.01.T01:CDS
TGAGTTCTTCATCTGTTGGG+TGG 0.631374 2:-65473147 None:intergenic
TTGACCACCGTTGAATGTGG+CGG 0.633783 2:-65474472 None:intergenic
ACTTGTGGTGGCTGTCACGG+TGG 0.643257 2:-65474312 None:intergenic
ATCTCAACAAGTGTGAACCA+TGG 0.644661 2:+65473236 MsG0280010163.01.T01:CDS
GTGACAGCCACCACAAGTGG+TGG 0.646314 2:+65474317 MsG0280010163.01.T01:CDS
AATGTGGCGGGTGCTAGCTG+CGG 0.668198 2:-65474459 None:intergenic
TACTACATGACCTGTCAATG+GGG 0.673977 2:-65470547 None:intergenic
TCTACCTCTATAGAAAACAA+GGG 0.693978 2:-65473522 None:intergenic
GCACCCGCCACATTCAACGG+TGG 0.727786 2:+65474468 MsG0280010163.01.T01:CDS
GGGTGGAAACGAAAACCAGG+TGG 0.775610 2:-65473130 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAATATTATAATATA+AGG - Chr2:65472780-65472799 None:intergenic 0.0%
!! AACAAAATAATAATAATAAG+TGG + Chr2:65472120-65472139 MsG0280010163.01.T01:intron 10.0%
!! CAATGAATTTATAAAAATTT+CGG + Chr2:65471185-65471204 MsG0280010163.01.T01:intron 10.0%
!!! AAAATTGATTATTTTTACAA+CGG + Chr2:65470754-65470773 MsG0280010163.01.T01:intron 10.0%
!!! TTATATATTTATGTTTTTGT+AGG - Chr2:65472102-65472121 None:intergenic 10.0%
!!! TTGTAAAAATAATCAATTTT+AGG - Chr2:65470754-65470773 None:intergenic 10.0%
!!! TTTATAAAGTTTTTTTCATA+GGG - Chr2:65472851-65472870 None:intergenic 10.0%
!!! TTTTATAAAGTTTTTTTCAT+AGG - Chr2:65472852-65472871 None:intergenic 10.0%
!! AAATAAAAGAATTTCAATAG+AGG - Chr2:65472420-65472439 None:intergenic 15.0%
!! AAGACTAATTCATTTATAAA+TGG - Chr2:65471420-65471439 None:intergenic 15.0%
!! AGACTAATTCATTTATAAAT+GGG - Chr2:65471419-65471438 None:intergenic 15.0%
!! TTAAAAATAGATGTTTACAA+TGG - Chr2:65471601-65471620 None:intergenic 15.0%
!! TTATAATATAAGGTATGATA+TGG - Chr2:65472770-65472789 None:intergenic 15.0%
!!! AAATTGATTATTTTTACAAC+GGG + Chr2:65470755-65470774 MsG0280010163.01.T01:intron 15.0%
!!! AATTATTTTTTTTCTCTTCA+TGG + Chr2:65470677-65470696 MsG0280010163.01.T01:intron 15.0%
!!! ACTTTTGATAAAAACATTAA+CGG - Chr2:65471478-65471497 None:intergenic 15.0%
!!! TTAATGTTTTTATCAAAAGT+CGG + Chr2:65471478-65471497 MsG0280010163.01.T01:intron 15.0%
!! AAAAATAATGTGAATGGTTA+TGG - Chr2:65474012-65474031 None:intergenic 20.0%
!! ACAAAAACAAACAAAAAAAC+AGG - Chr2:65471676-65471695 None:intergenic 20.0%
!! ATTATATTATCAGAACATAC+AGG + Chr2:65472695-65472714 MsG0280010163.01.T01:intron 20.0%
!! TAAATAAAAATCAAGAAAGC+AGG + Chr2:65472220-65472239 MsG0280010163.01.T01:intron 20.0%
!! TAATTCATTTATAAATGGGA+TGG - Chr2:65471415-65471434 None:intergenic 20.0%
!! TTAATGGCTTATCATTATAT+AGG - Chr2:65472934-65472953 None:intergenic 20.0%
!!! AAGTTTTTTAACATTGTGTT+AGG - Chr2:65471896-65471915 None:intergenic 20.0%
!!! AATGTTGATTTTTAAAAGAG+CGG + Chr2:65471754-65471773 MsG0280010163.01.T01:intron 20.0%
!!! AATTGATTATTTTTACAACG+GGG + Chr2:65470756-65470775 MsG0280010163.01.T01:intron 20.0%
!!! AGTTTTTTAACATTGTGTTA+GGG - Chr2:65471895-65471914 None:intergenic 20.0%
!!! ATGTATTTTTGAATTCATGA+AGG + Chr2:65474235-65474254 MsG0280010163.01.T01:intron 20.0%
!!! GTTTTGAAAAATAATGTGAA+TGG - Chr2:65474018-65474037 None:intergenic 20.0%
!!! TAAAAAATCTAGAATCATGT+GGG - Chr2:65470644-65470663 None:intergenic 20.0%
!!! TAATGTTTTTATCAAAAGTC+GGG + Chr2:65471479-65471498 MsG0280010163.01.T01:intron 20.0%
!!! TATCATGTAAAAGAGTATTA+CGG - Chr2:65471839-65471858 None:intergenic 20.0%
!!! TGAGACTAATTTTTTGAATT+AGG - Chr2:65471979-65471998 None:intergenic 20.0%
!!! TTGTTTGTTTTTGTTATCAA+AGG + Chr2:65471682-65471701 MsG0280010163.01.T01:intron 20.0%
!!! TTTATAAAGTGAGATCTTTT+TGG - Chr2:65474153-65474172 None:intergenic 20.0%
! AAAATCACGAGAAAATTATG+TGG + Chr2:65471648-65471667 MsG0280010163.01.T01:intron 25.0%
! AAATCACGAGAAAATTATGT+GGG + Chr2:65471649-65471668 MsG0280010163.01.T01:intron 25.0%
! AACTCTTCATATAAACTGTT+GGG + Chr2:65470952-65470971 MsG0280010163.01.T01:intron 25.0%
! AGGTAAATGAAAAAGAGAAT+AGG - Chr2:65472400-65472419 None:intergenic 25.0%
! AGTGTAGTGCAAAAATAATT+TGG + Chr2:65471065-65471084 MsG0280010163.01.T01:intron 25.0%
! ATAAATCCAACTCAAAAGAT+TGG - Chr2:65471864-65471883 None:intergenic 25.0%
! GTACAAAACACTTGAAATTA+AGG - Chr2:65473710-65473729 None:intergenic 25.0%
! GTGTAGTGCAAAAATAATTT+GGG + Chr2:65471066-65471085 MsG0280010163.01.T01:intron 25.0%
! TAAAGGTGAAAAAAGTAACT+GGG + Chr2:65473550-65473569 MsG0280010163.01.T01:CDS 25.0%
! TATGATAGGAAAAAGTGAAA+GGG + Chr2:65470708-65470727 MsG0280010163.01.T01:intron 25.0%
! TGAAACCATCAAAAAAAGAA+AGG + Chr2:65471542-65471561 MsG0280010163.01.T01:intron 25.0%
! TGATAAAAACATTAACGGTT+AGG - Chr2:65471473-65471492 None:intergenic 25.0%
! TGTATGGAAGAAAATCAATT+CGG - Chr2:65471328-65471347 None:intergenic 25.0%
!! AAAAAACTTGGACTTTTGTA+AGG - Chr2:65470849-65470868 None:intergenic 25.0%
!! AAAAACTTGGACTTTTGTAA+GGG - Chr2:65470848-65470867 None:intergenic 25.0%
!! AACATGCATTTAAAATGCTA+TGG - Chr2:65471157-65471176 None:intergenic 25.0%
!! AACTTTTCTAACACTTTGTT+TGG + Chr2:65473316-65473335 MsG0280010163.01.T01:intron 25.0%
!! GTAAAAAATCTAGAATCATG+TGG - Chr2:65470645-65470664 None:intergenic 25.0%
!! GTGGATTATTATGTATGATA+GGG + Chr2:65472636-65472655 MsG0280010163.01.T01:intron 25.0%
!! TAGCATTTTAAATGCATGTT+TGG + Chr2:65471157-65471176 MsG0280010163.01.T01:intron 25.0%
!! TCTCTTTTCATTTTCTCAAA+TGG + Chr2:65473044-65473063 MsG0280010163.01.T01:intron 25.0%
!!! AATCTTTTGAGTTGGATTTA+TGG + Chr2:65471863-65471882 MsG0280010163.01.T01:intron 25.0%
!!! ATAGTCCTTTCTTTTTTTGA+TGG - Chr2:65471550-65471569 None:intergenic 25.0%
!!! TGAATCTTGTTTTTCCTAAT+AGG + Chr2:65473791-65473810 MsG0280010163.01.T01:intron 25.0%
AAATAAATGTCTCGAAAGCT+AGG - Chr2:65470874-65470893 None:intergenic 30.0%
AATATAAGGTATGATATGGC+TGG - Chr2:65472766-65472785 None:intergenic 30.0%
AATGCATATAGAAGCCTATT+AGG - Chr2:65473808-65473827 None:intergenic 30.0%
AGTAAAGAATTGTAACAGAG+AGG - Chr2:65472503-65472522 None:intergenic 30.0%
AGTGAAAGAGATTATGAGAA+AGG - Chr2:65472891-65472910 None:intergenic 30.0%
CAAAATGAAACTGGTGAAAA+TGG - Chr2:65474081-65474100 None:intergenic 30.0%
CAACTCTTCATATAAACTGT+TGG + Chr2:65470951-65470970 MsG0280010163.01.T01:intron 30.0%
CTAAAGGTGAAAAAAGTAAC+TGG + Chr2:65473549-65473568 MsG0280010163.01.T01:CDS 30.0%
GAAAGCTAGGTAAAAAAACT+TGG - Chr2:65470861-65470880 None:intergenic 30.0%
GAATTACCATGATAGTTAGT+AGG - Chr2:65470576-65470595 None:intergenic 30.0%
GTAAAGAATTGTAACAGAGA+GGG - Chr2:65472502-65472521 None:intergenic 30.0%
GTAAATCCTACTAACTATCA+TGG + Chr2:65470567-65470586 MsG0280010163.01.T01:CDS 30.0%
GTATGATAGGAAAAAGTGAA+AGG + Chr2:65470707-65470726 MsG0280010163.01.T01:intron 30.0%
GTGAAAGAGATTATGAGAAA+GGG - Chr2:65472890-65472909 None:intergenic 30.0%
TAATAGGCTTCTATATGCAT+TGG + Chr2:65473807-65473826 MsG0280010163.01.T01:intron 30.0%
TCAAAAACTTACTCTCTTGT+TGG + Chr2:65473488-65473507 MsG0280010163.01.T01:CDS 30.0%
TCCAAAAGAAAAACAATGAG+TGG - Chr2:65470606-65470625 None:intergenic 30.0%
TCTACCTCTATAGAAAACAA+GGG - Chr2:65473525-65473544 None:intergenic 30.0%
TGAATTCATGAAGGATGAAT+GGG + Chr2:65474244-65474263 MsG0280010163.01.T01:intron 30.0%
TGTTAATGGTTATTACCCTA+TGG + Chr2:65473933-65473952 MsG0280010163.01.T01:intron 30.0%
TTAACAGAGAAAGCTAAGAT+GGG + Chr2:65473344-65473363 MsG0280010163.01.T01:intron 30.0%
TTACAATTCTTTACTGACAG+AGG + Chr2:65472508-65472527 MsG0280010163.01.T01:intron 30.0%
TTGAATTCATGAAGGATGAA+TGG + Chr2:65474243-65474262 MsG0280010163.01.T01:intron 30.0%
TTTAACAGAGAAAGCTAAGA+TGG + Chr2:65473343-65473362 MsG0280010163.01.T01:intron 30.0%
TTTCAAAAGACTAGAGAGAT+AGG + Chr2:65473768-65473787 MsG0280010163.01.T01:intron 30.0%
! AGAATGAAAAAGTGTGTGAA+TGG - Chr2:65473027-65473046 None:intergenic 30.0%
! CGTGGATTATTATGTATGAT+AGG + Chr2:65472635-65472654 MsG0280010163.01.T01:intron 30.0%
! TCATGGAAAAGAAGTATGAT+AGG + Chr2:65470694-65470713 MsG0280010163.01.T01:intron 30.0%
! TGATTTTCTTCCATACAAGA+GGG + Chr2:65471331-65471350 MsG0280010163.01.T01:intron 30.0%
! TGTTACAGCTTTATCACTTA+TGG + Chr2:65472359-65472378 MsG0280010163.01.T01:intron 30.0%
! TTGATGATAAGTTAGTTACC+AGG - Chr2:65473268-65473287 None:intergenic 30.0%
! TTGATTTTCTTCCATACAAG+AGG + Chr2:65471330-65471349 MsG0280010163.01.T01:intron 30.0%
!! ACCACTCATTGTTTTTCTTT+TGG + Chr2:65470602-65470621 MsG0280010163.01.T01:intron 30.0%
!! CTTTTGAAAGGATCAAAATG+CGG - Chr2:65473757-65473776 None:intergenic 30.0%
!! GTTGATGATTTATCTCGATT+AGG + Chr2:65473844-65473863 MsG0280010163.01.T01:intron 30.0%
!! TATCAAAGGCTTTTTGTTGT+CGG + Chr2:65471696-65471715 MsG0280010163.01.T01:intron 30.0%
!! TATCTCTCTAGTCTTTTGAA+AGG - Chr2:65473769-65473788 None:intergenic 30.0%
!! TTTGGTAGAAAAAGCATTGT+TGG - Chr2:65474135-65474154 None:intergenic 30.0%
!!! AAAACCCTTGTTTTCTATAG+AGG + Chr2:65473518-65473537 MsG0280010163.01.T01:CDS 30.0%
!!! CAGTTACTTTTTTCACCTTT+AGG - Chr2:65473551-65473570 None:intergenic 30.0%
!!! TGTCAAGAACTTTTTTGAGA+AGG - Chr2:65473183-65473202 None:intergenic 30.0%
AAACTCTTACATGCACCATA+GGG - Chr2:65473951-65473970 None:intergenic 35.0%
AACCCTATGCAAAATGAAAC+TGG - Chr2:65474090-65474109 None:intergenic 35.0%
AACGGTTAGGATTTAAGTCT+GGG - Chr2:65471460-65471479 None:intergenic 35.0%
AAGCAAATTTGCCTTCAAGA+CGG - Chr2:65473589-65473608 None:intergenic 35.0%
ACGCATCGTTTACATGTTAA+TGG + Chr2:65473919-65473938 MsG0280010163.01.T01:intron 35.0%
ATAATCCACGTAGATGAAGA+AGG - Chr2:65472625-65472644 None:intergenic 35.0%
CAAAAGAGTAACACTGGAAA+TGG + Chr2:65474284-65474303 MsG0280010163.01.T01:CDS 35.0%
CTCTACCTCTATAGAAAACA+AGG - Chr2:65473526-65473545 None:intergenic 35.0%
GAAGAGTGAAACGATCTTAA+TGG - Chr2:65472950-65472969 None:intergenic 35.0%
GACAGAGAAAATTAGTACCT+TGG - Chr2:65473633-65473652 None:intergenic 35.0%
GTGAATACATGAGTTTGCAT+GGG + Chr2:65473984-65474003 MsG0280010163.01.T01:intron 35.0%
GTGTTTCAAAAGAGTAACAC+TGG + Chr2:65474278-65474297 MsG0280010163.01.T01:CDS 35.0%
TAACGGTTAGGATTTAAGTC+TGG - Chr2:65471461-65471480 None:intergenic 35.0%
TAAGGAGATGAATCAAGAAG+AGG - Chr2:65474437-65474456 None:intergenic 35.0%
TAGGGATTTGATGAATCAAG+TGG - Chr2:65472833-65472852 None:intergenic 35.0%
TATACTGCATCATCCACAAA+GGG + Chr2:65470923-65470942 MsG0280010163.01.T01:intron 35.0%
TGATGAGTTCTTCATCTGTT+GGG - Chr2:65473153-65473172 None:intergenic 35.0%
TGATGCAGTATACATACAGT+TGG - Chr2:65470915-65470934 None:intergenic 35.0%
TGTGAATACATGAGTTTGCA+TGG + Chr2:65473983-65474002 MsG0280010163.01.T01:intron 35.0%
TTACTACATGACCTGTCAAT+GGG - Chr2:65470551-65470570 None:intergenic 35.0%
TTCCTTCCCCATCAAATTAT+GGG - Chr2:65470803-65470822 None:intergenic 35.0%
TTTACTACATGACCTGTCAA+TGG - Chr2:65470552-65470571 None:intergenic 35.0%
! AATCTAGAATCATGTGGGTT+TGG - Chr2:65470639-65470658 None:intergenic 35.0%
! ATCTTGTAAAGTTTTCACCC+AGG - Chr2:65471112-65471131 None:intergenic 35.0%
! CACCAGTTTCATTTTGCATA+GGG + Chr2:65474085-65474104 MsG0280010163.01.T01:intron 35.0%
! TCACCAGTTTCATTTTGCAT+AGG + Chr2:65474084-65474103 MsG0280010163.01.T01:intron 35.0%
! TTACTGTGTTGTTCATGTGA+TGG - Chr2:65473088-65473107 None:intergenic 35.0%
!! ATCAAAGGCTTTTTGTTGTC+GGG + Chr2:65471697-65471716 MsG0280010163.01.T01:intron 35.0%
!! GATAGACCAATCTTTTGAGT+TGG + Chr2:65471855-65471874 MsG0280010163.01.T01:intron 35.0%
AAGAGGGTTGAAGAGTGATA+TGG + Chr2:65471347-65471366 MsG0280010163.01.T01:intron 40.0%
ACAAATAGAGCAACAGAAGC+TGG + Chr2:65473425-65473444 MsG0280010163.01.T01:CDS 40.0%
AGCAGGCAGTGTAATAAACA+TGG + Chr2:65472237-65472256 MsG0280010163.01.T01:intron 40.0%
ATACTGCATCATCCACAAAG+GGG + Chr2:65470924-65470943 MsG0280010163.01.T01:intron 40.0%
ATCTCAACAAGTGTGAACCA+TGG + Chr2:65473236-65473255 MsG0280010163.01.T01:CDS 40.0%
ATGAATCAAGAAGAGGTGGA+AGG - Chr2:65474430-65474449 None:intergenic 40.0%
ATGCATGAATACCGTCTTGA+AGG + Chr2:65473575-65473594 MsG0280010163.01.T01:CDS 40.0%
CTAAGATGGGTGAGAAAGAA+TGG + Chr2:65473357-65473376 MsG0280010163.01.T01:CDS 40.0%
CTATTTGTACGCAAACCAGT+TGG - Chr2:65473413-65473432 None:intergenic 40.0%
CTTCCTTCCCCATCAAATTA+TGG - Chr2:65470804-65470823 None:intergenic 40.0%
GAAACTCTTACATGCACCAT+AGG - Chr2:65473952-65473971 None:intergenic 40.0%
GAAGAAATATTGAGCAGTGC+AGG - Chr2:65472538-65472557 None:intergenic 40.0%
GACATGCCCATAATTTGATG+GGG + Chr2:65470794-65470813 MsG0280010163.01.T01:intron 40.0%
GGACATGCCCATAATTTGAT+GGG + Chr2:65470793-65470812 MsG0280010163.01.T01:intron 40.0%
GGGACACCATATTATTGAGA+GGG + Chr2:65471086-65471105 MsG0280010163.01.T01:intron 40.0%
GTATACTGCATCATCCACAA+AGG + Chr2:65470922-65470941 MsG0280010163.01.T01:intron 40.0%
GTGATGAGTTCTTCATCTGT+TGG - Chr2:65473154-65473173 None:intergenic 40.0%
GTTGAGATCAACTTCAGCTA+TGG - Chr2:65473224-65473243 None:intergenic 40.0%
TAAACCGAAGAAGGTGAACT+TGG - Chr2:65474407-65474426 None:intergenic 40.0%
TAATTTGATGGGGAAGGAAG+TGG + Chr2:65470804-65470823 MsG0280010163.01.T01:intron 40.0%
TACTACATGACCTGTCAATG+GGG - Chr2:65470550-65470569 None:intergenic 40.0%
TATAGAGGTAGAGCTCCTAA+AGG + Chr2:65473533-65473552 MsG0280010163.01.T01:CDS 40.0%
TATCAATCAACCCCATTGAC+AGG + Chr2:65470537-65470556 MsG0280010163.01.T01:CDS 40.0%
TCTCAACAAGTGTGAACCAT+GGG + Chr2:65473237-65473256 MsG0280010163.01.T01:CDS 40.0%
TGAACCAAGTTCACCTTCTT+CGG + Chr2:65474400-65474419 MsG0280010163.01.T01:CDS 40.0%
TGGACATGCCCATAATTTGA+TGG + Chr2:65470792-65470811 MsG0280010163.01.T01:intron 40.0%
TGGGACACCATATTATTGAG+AGG + Chr2:65471085-65471104 MsG0280010163.01.T01:intron 40.0%
TTTACAACGGGGTCCTATAA+AGG + Chr2:65470767-65470786 MsG0280010163.01.T01:intron 40.0%
! TGTGTTGTTCATGTGATGGT+GGG - Chr2:65473084-65473103 None:intergenic 40.0%
AAGACTCATGCTGTTGTTGC+TGG - Chr2:65474375-65474394 None:intergenic 45.0%
ACCATATTATTGAGAGGGCC+TGG + Chr2:65471091-65471110 MsG0280010163.01.T01:intron 45.0%
AGTGATGCACATTTACCACC+TGG + Chr2:65473115-65473134 MsG0280010163.01.T01:CDS 45.0%
CACTCTTCAACCCTCTTGTA+TGG - Chr2:65471344-65471363 None:intergenic 45.0%
CATTTGACCACCGTTGAATG+TGG - Chr2:65474478-65474497 None:intergenic 45.0%
CCATATTATTGAGAGGGCCT+GGG + Chr2:65471092-65471111 MsG0280010163.01.T01:intron 45.0%
GAAATCTCGACGATTCGTTG+TGG + Chr2:65471252-65471271 MsG0280010163.01.T01:intron 45.0%
GAAGAAGGTGAACTTGGTTC+AGG - Chr2:65474401-65474420 None:intergenic 45.0%
GAGAGAGAAAGTGATGTACG+AGG - Chr2:65472603-65472622 None:intergenic 45.0%
GAGCAACAGAAGCTGGTTAT+TGG + Chr2:65473432-65473451 MsG0280010163.01.T01:CDS 45.0%
GCTGGTTATTGGAAAGCAAC+TGG + Chr2:65473443-65473462 MsG0280010163.01.T01:CDS 45.0%
GGAGATGAATCAAGAAGAGG+TGG - Chr2:65474434-65474453 None:intergenic 45.0%
TACTGCATCATCCACAAAGG+GGG + Chr2:65470925-65470944 MsG0280010163.01.T01:intron 45.0%
TATGGCTCTTGCAGTGAAAG+TGG - Chr2:65473206-65473225 None:intergenic 45.0%
TCTCTCCTTCTTCATCTACG+TGG + Chr2:65472617-65472636 MsG0280010163.01.T01:intron 45.0%
TGAGTTCTTCATCTGTTGGG+TGG - Chr2:65473150-65473169 None:intergenic 45.0%
TGCCCATAATTTGATGGGGA+AGG + Chr2:65470798-65470817 MsG0280010163.01.T01:intron 45.0%
! CTGTGTTGTTCATGTGATGG+TGG - Chr2:65473085-65473104 None:intergenic 45.0%
! CTTCCTCTCTAGAAACTCCA+AGG + Chr2:65473613-65473632 MsG0280010163.01.T01:CDS 45.0%
! GTACCTTGGAGTTTCTAGAG+AGG - Chr2:65473619-65473638 None:intergenic 45.0%
!! CGTGACAGAAAGTATCCAAC+TGG + Chr2:65473395-65473414 MsG0280010163.01.T01:CDS 45.0%
!! GGCTGAGTTTGAGGCTATTT+TGG - Chr2:65474354-65474373 None:intergenic 45.0%
!! TTGTTCATGTGATGGTGGGA+TGG - Chr2:65473080-65473099 None:intergenic 45.0%
!!! CTTTTTTGCACCACCACTTG+TGG - Chr2:65474330-65474349 None:intergenic 45.0%
!! AATATAATTTAATTAAAAAG+AGG - Chr2:65472057-65472076 None:intergenic 5.0%
!!! TAAAAAACTTATTTTTTTAA+AGG + Chr2:65471906-65471925 MsG0280010163.01.T01:intron 5.0%
!!! TTTATCTATTTAATTTAATA+TGG - Chr2:65471801-65471820 None:intergenic 5.0%
ATGTACGAGGAGAGAGAGTG+GGG - Chr2:65472590-65472609 None:intergenic 50.0%
CCCAGGCCCTCTCAATAATA+TGG - Chr2:65471095-65471114 None:intergenic 50.0%
GATGTACGAGGAGAGAGAGT+GGG - Chr2:65472591-65472610 None:intergenic 50.0%
GGTGGAAGGTAAACCGAAGA+AGG - Chr2:65474416-65474435 None:intergenic 50.0%
GTTGGGTGGAAACGAAAACC+AGG - Chr2:65473136-65473155 None:intergenic 50.0%
TAGTTACCAGGTAGCTCCCA+TGG - Chr2:65473256-65473275 None:intergenic 50.0%
TGATGTACGAGGAGAGAGAG+TGG - Chr2:65472592-65472611 None:intergenic 50.0%
TTGACCACCGTTGAATGTGG+CGG - Chr2:65474475-65474494 None:intergenic 50.0%
! GTTGTTGCTGGCTGAGTTTG+AGG - Chr2:65474363-65474382 None:intergenic 50.0%
! TTTTGCACCACCACTTGTGG+TGG - Chr2:65474327-65474346 None:intergenic 50.0%
AACGGGGTCCTATAAAGGCG+TGG + Chr2:65470772-65470791 MsG0280010163.01.T01:intron 55.0%
AAGAGTTGCAGCCCCCTTTG+TGG - Chr2:65470939-65470958 None:intergenic 55.0%
ACCACTTGTGGTGGCTGTCA+CGG - Chr2:65474318-65474337 None:intergenic 55.0%
CTAGCACCCGCCACATTCAA+CGG + Chr2:65474465-65474484 MsG0280010163.01.T01:CDS 55.0%
GGGCATGTCCACGCCTTTAT+AGG - Chr2:65470783-65470802 None:intergenic 55.0%
GGGTGGAAACGAAAACCAGG+TGG - Chr2:65473133-65473152 None:intergenic 55.0%
TGACCACCGTTGAATGTGGC+GGG - Chr2:65474474-65474493 None:intergenic 55.0%
TGTGAACCATGGGAGCTACC+TGG + Chr2:65473247-65473266 MsG0280010163.01.T01:CDS 55.0%
ACCGTGACAGCCACCACAAG+TGG + Chr2:65474314-65474333 MsG0280010163.01.T01:CDS 60.0%
ACTTGTGGTGGCTGTCACGG+TGG - Chr2:65474315-65474334 None:intergenic 60.0%
GGAGAGAGAGTGGGGTAGCT+AGG - Chr2:65472582-65472601 None:intergenic 60.0%
GTGACAGCCACCACAAGTGG+TGG + Chr2:65474317-65474336 MsG0280010163.01.T01:CDS 60.0%
!! AATGTGGCGGGTGCTAGCTG+CGG - Chr2:65474462-65474481 None:intergenic 60.0%
CGGGTGCTAGCTGCGGTGTA+AGG - Chr2:65474455-65474474 None:intergenic 65.0%
GCACCCGCCACATTCAACGG+TGG + Chr2:65474468-65474487 MsG0280010163.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 65470534 65474502 65470534 ID=MsG0280010163.01;Name=MsG0280010163.01
Chr2 mRNA 65470534 65474502 65470534 ID=MsG0280010163.01.T01;Parent=MsG0280010163.01;Name=MsG0280010163.01.T01;_AED=0.25;_eAED=0.25;_QI=0|0|0|0.75|1|1|4|0|260
Chr2 exon 65470534 65470588 65470534 ID=MsG0280010163.01.T01:exon:14139;Parent=MsG0280010163.01.T01
Chr2 exon 65473071 65473268 65473071 ID=MsG0280010163.01.T01:exon:14140;Parent=MsG0280010163.01.T01
Chr2 exon 65473351 65473634 65473351 ID=MsG0280010163.01.T01:exon:14141;Parent=MsG0280010163.01.T01
Chr2 exon 65474257 65474502 65474257 ID=MsG0280010163.01.T01:exon:14142;Parent=MsG0280010163.01.T01
Chr2 CDS 65470534 65470588 65470534 ID=MsG0280010163.01.T01:cds;Parent=MsG0280010163.01.T01
Chr2 CDS 65473071 65473268 65473071 ID=MsG0280010163.01.T01:cds;Parent=MsG0280010163.01.T01
Chr2 CDS 65473351 65473634 65473351 ID=MsG0280010163.01.T01:cds;Parent=MsG0280010163.01.T01
Chr2 CDS 65474257 65474502 65474257 ID=MsG0280010163.01.T01:cds;Parent=MsG0280010163.01.T01
Gene Sequence

>MsG0280010163.01.T01

ATGTATCAATCAACCCCATTGACAGGTCATGTAGTAAATCCTACTAACTATCATGCTTCTTCCATCCCACCATCACATGAACAACACAGTAATAACAACAGTGATGCACATTTACCACCTGGTTTTCGTTTCCACCCAACAGATGAAGAACTCATCACATTCTACCTTCTCAAAAAAGTTCTTGACACCACTTTCACTGCAAGAGCCATAGCTGAAGTTGATCTCAACAAGTGTGAACCATGGGAGCTACCTGAGAAAGCTAAGATGGGTGAGAAAGAATGGTACTTCTTCAGTCTACGTGACAGAAAGTATCCAACTGGTTTGCGTACAAATAGAGCAACAGAAGCTGGTTATTGGAAAGCAACTGGAAAAGATAGAGAGATTTATAGCTCAAAAACTTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTATAGAGGTAGAGCTCCTAAAGGTGAAAAAAGTAACTGGGTTATGCATGAATACCGTCTTGAAGGCAAATTTGCTTATCACTTCCTCTCTAGAAACTCCAAGGATGAATGGGTCATTTCACGTGTGTTTCAAAAGAGTAACACTGGAAATGGAAGCACCACCGTGACAGCCACCACAAGTGGTGGTGCAAAAAAGACCAAAATAGCCTCAAACTCAGCCAGCAACAACAGCATGAGTCTTTGTCCTGAACCAAGTTCACCTTCTTCGGTTTACCTTCCACCTCTTCTTGATTCATCTCCTTACACCGCAGCTAGCACCCGCCACATTCAACGGTGGTCAAATGTGTAA

Protein sequence

>MsG0280010163.01.T01

MYQSTPLTGHVVNPTNYHASSIPPSHEQHSNNNSDAHLPPGFRFHPTDEELITFYLLKKVLDTTFTARAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLSRNSKDEWVISRVFQKSNTGNGSTTVTATTSGGAKKTKIASNSASNNSMSLCPEPSSPSSVYLPPLLDSSPYTAASTRHIQRWSNV*