Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034835.01.T01 | XP_013452816.1 | 87.035 | 779 | 19 | 4 | 1 | 748 | 1 | 728 | 0 | 1376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034835.01.T01 | Q9FX31 | 57.105 | 760 | 221 | 12 | 25 | 748 | 28 | 718 | 0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034835.01.T01 | A0A072UAM9 | 87.035 | 779 | 19 | 4 | 1 | 748 | 1 | 728 | 0.0 | 1376 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0680034835.01.T01 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0680034835.01 | 0.854081 | 1.560896e-61 | 3.445931e-58 |
| MsG0180000632.01 | MsG0680034835.01 | 0.820877 | 5.437521e-53 | 4.355395e-50 |
| MsG0180001200.01 | MsG0680034835.01 | 0.810426 | 1.159821e-50 | 6.988669e-48 |
| MsG0180001771.01 | MsG0680034835.01 | 0.805955 | 1.039481e-49 | 5.573109e-47 |
| MsG0180003741.01 | MsG0680034835.01 | 0.856864 | 2.411579e-62 | 5.836738e-59 |
| MsG0380011496.01 | MsG0680034835.01 | 0.805606 | 1.230711e-49 | 6.539191e-47 |
| MsG0380011501.01 | MsG0680034835.01 | 0.808210 | 3.464263e-50 | 1.969023e-47 |
| MsG0380011675.01 | MsG0680034835.01 | 0.813913 | 2.011677e-51 | 1.330711e-48 |
| MsG0680031707.01 | MsG0680034835.01 | 0.842049 | 3.277687e-58 | 4.908931e-55 |
| MsG0680033143.01 | MsG0680034835.01 | 0.805925 | 1.054710e-49 | 5.650376e-47 |
| MsG0680034835.01 | MsG0680035683.01 | 0.824862 | 6.412391e-54 | 5.750012e-51 |
| MsG0680034835.01 | MsG0780040286.01 | 0.809295 | 2.030706e-50 | 1.187765e-47 |
| MsG0680034835.01 | MsG0780040846.01 | 0.832847 | 7.481136e-56 | 8.464239e-53 |
| MsG0680034835.01 | MsG0780040966.01 | 0.813286 | 2.764380e-51 | 1.797759e-48 |
| MsG0680034835.01 | MsG0780041259.01 | 0.804580 | 2.017800e-49 | 1.044186e-46 |
| MsG0680034835.01 | MsG0780041698.01 | 0.810250 | 1.265502e-50 | 7.590686e-48 |
| MsG0680034835.01 | MsG0880041834.01 | 0.830046 | 3.660744e-55 | 3.813318e-52 |
| MsG0680034835.01 | MsG0880041858.01 | 0.828733 | 7.631339e-55 | 7.649776e-52 |
| MsG0680034835.01 | MsG0880045585.01 | 0.838070 | 3.577515e-57 | 4.738096e-54 |
| MsG0680034835.01 | MsG0880045586.01 | 0.805117 | 1.558681e-49 | 8.178472e-47 |
| MsG0480018909.01 | MsG0680034835.01 | 0.841788 | 3.841080e-58 | 5.705628e-55 |
| MsG0480024022.01 | MsG0680034835.01 | 0.818594 | 1.806474e-52 | 1.358013e-49 |
| MsG0580025466.01 | MsG0680034835.01 | 0.823393 | 1.419058e-53 | 1.220171e-50 |
| MsG0380016465.01 | MsG0680034835.01 | 0.802281 | 6.044829e-49 | 2.949271e-46 |
| MsG0380016466.01 | MsG0680034835.01 | 0.825559 | 4.387759e-54 | 4.013065e-51 |
| MsG0580027925.01 | MsG0680034835.01 | 0.831052 | 2.077082e-55 | 2.228341e-52 |
| MsG0580029310.01 | MsG0680034835.01 | 0.833469 | 5.238144e-56 | 6.037913e-53 |
| MsG0580029418.01 | MsG0680034835.01 | 0.809101 | 2.234434e-50 | 1.300194e-47 |
| MsG0280007197.01 | MsG0680034835.01 | 0.820672 | 6.061956e-53 | 4.827316e-50 |
| MsG0280010163.01 | MsG0680034835.01 | 0.821448 | 4.017059e-53 | 3.268919e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034835.01.T01 | MTR_6g477820 | 87.035 | 779 | 19 | 4 | 1 | 748 | 1 | 728 | 0.0 | 1376 |
| MsG0680034835.01.T01 | MTR_7g427710 | 56.714 | 767 | 168 | 14 | 17 | 746 | 2 | 641 | 0.0 | 786 |
| MsG0680034835.01.T01 | MTR_8g432540 | 44.374 | 791 | 327 | 10 | 2 | 747 | 88 | 810 | 0.0 | 638 |
| MsG0680034835.01.T01 | MTR_7g076080 | 45.372 | 767 | 304 | 13 | 23 | 747 | 85 | 778 | 0.0 | 633 |
| MsG0680034835.01.T01 | MTR_4g047800 | 43.662 | 781 | 327 | 14 | 2 | 748 | 33 | 734 | 0.0 | 625 |
| MsG0680034835.01.T01 | MTR_2g088470 | 44.129 | 775 | 321 | 13 | 2 | 744 | 39 | 733 | 0.0 | 617 |
| MsG0680034835.01.T01 | MTR_5g029320 | 44.503 | 755 | 323 | 15 | 29 | 748 | 89 | 782 | 0.0 | 616 |
| MsG0680034835.01.T01 | MTR_1g101280 | 43.289 | 760 | 325 | 12 | 27 | 743 | 54 | 750 | 0.0 | 602 |
| MsG0680034835.01.T01 | MTR_7g427690 | 61.939 | 423 | 98 | 8 | 203 | 590 | 38 | 432 | 3.91e-173 | 504 |
| MsG0680034835.01.T01 | MTR_2g101720 | 37.317 | 753 | 328 | 15 | 33 | 745 | 143 | 791 | 5.25e-169 | 506 |
| MsG0680034835.01.T01 | MTR_0198s0030 | 39.553 | 761 | 342 | 17 | 33 | 743 | 59 | 751 | 1.60e-167 | 501 |
| MsG0680034835.01.T01 | MTR_2g030570 | 36.654 | 783 | 368 | 18 | 1 | 743 | 1 | 695 | 2.29e-149 | 452 |
| MsG0680034835.01.T01 | MTR_2g030600 | 36.364 | 781 | 366 | 20 | 1 | 743 | 1 | 688 | 1.92e-141 | 432 |
| MsG0680034835.01.T01 | MTR_5g005600 | 33.862 | 756 | 361 | 15 | 36 | 743 | 52 | 716 | 5.14e-135 | 416 |
| MsG0680034835.01.T01 | MTR_2g030660 | 32.454 | 758 | 360 | 20 | 21 | 743 | 7 | 647 | 4.00e-116 | 365 |
| MsG0680034835.01.T01 | MTR_7g427700 | 51.964 | 331 | 69 | 5 | 17 | 310 | 2 | 279 | 6.35e-95 | 302 |
| MsG0680034835.01.T01 | MTR_7g427700 | 47.706 | 218 | 50 | 5 | 529 | 746 | 281 | 434 | 2.57e-40 | 154 |
| MsG0680034835.01.T01 | MTR_0653s0020 | 70.270 | 185 | 42 | 3 | 374 | 558 | 1 | 172 | 1.26e-82 | 261 |
| MsG0680034835.01.T01 | MTR_2g083350 | 33.000 | 500 | 246 | 16 | 254 | 743 | 111 | 531 | 2.66e-68 | 235 |
| MsG0680034835.01.T01 | MTR_5g046040 | 63.473 | 167 | 60 | 1 | 27 | 192 | 31 | 197 | 1.09e-67 | 228 |
| MsG0680034835.01.T01 | MTR_2g083330 | 31.062 | 499 | 257 | 13 | 254 | 744 | 107 | 526 | 6.67e-65 | 226 |
| MsG0680034835.01.T01 | MTR_7g027265 | 68.657 | 134 | 39 | 1 | 18 | 148 | 3 | 136 | 1.82e-53 | 181 |
| MsG0680034835.01.T01 | MTR_7g027605 | 77.174 | 92 | 20 | 1 | 280 | 371 | 1 | 91 | 8.81e-45 | 155 |
| MsG0680034835.01.T01 | MTR_0653s0010 | 62.308 | 130 | 36 | 4 | 617 | 746 | 1 | 117 | 3.19e-36 | 132 |
| MsG0680034835.01.T01 | MTR_2g030690 | 28.612 | 353 | 169 | 11 | 398 | 743 | 1 | 277 | 1.78e-32 | 127 |
| MsG0680034835.01.T01 | MTR_6g027290 | 33.728 | 169 | 105 | 3 | 1 | 167 | 1 | 164 | 2.41e-24 | 100 |
| MsG0680034835.01.T01 | MTR_7g427670 | 59.770 | 87 | 24 | 1 | 83 | 169 | 32 | 107 | 2.54e-24 | 99.0 |
| MsG0680034835.01.T01 | MTR_7g427720 | 68.235 | 85 | 18 | 3 | 662 | 746 | 23 | 98 | 1.38e-23 | 96.3 |
| MsG0680034835.01.T01 | MTR_6g086740 | 87.755 | 49 | 6 | 0 | 700 | 748 | 4 | 52 | 3.53e-20 | 84.7 |
| MsG0680034835.01.T01 | MTR_2g451350 | 36.090 | 133 | 56 | 2 | 234 | 337 | 1 | 133 | 9.22e-20 | 86.7 |
| MsG0680034835.01.T01 | MTR_1g105420 | 27.698 | 278 | 123 | 8 | 84 | 350 | 1 | 211 | 2.35e-18 | 84.7 |
| MsG0680034835.01.T01 | MTR_1g036590 | 86.486 | 37 | 5 | 0 | 311 | 347 | 238 | 274 | 1.42e-13 | 73.9 |
| MsG0680034835.01.T01 | MTR_2g030720 | 30.833 | 120 | 71 | 2 | 33 | 152 | 22 | 129 | 4.23e-13 | 68.2 |
| MsG0680034835.01.T01 | MTR_4g058970 | 30.769 | 182 | 90 | 6 | 18 | 163 | 9 | 190 | 1.14e-12 | 72.0 |
| MsG0680034835.01.T01 | MTR_7g103340 | 38.835 | 103 | 60 | 1 | 25 | 124 | 56 | 158 | 3.52e-12 | 67.4 |
| MsG0680034835.01.T01 | MTR_2g451350 | 46.667 | 60 | 32 | 0 | 278 | 337 | 35 | 94 | 8.93e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034835.01.T01 | AT1G73360 | 57.105 | 760 | 221 | 12 | 25 | 748 | 28 | 718 | 0.0 | 822 |
| MsG0680034835.01.T01 | AT1G17920 | 53.359 | 774 | 232 | 14 | 12 | 748 | 5 | 686 | 0.0 | 778 |
| MsG0680034835.01.T01 | AT1G17920 | 53.359 | 774 | 232 | 14 | 12 | 748 | 5 | 686 | 0.0 | 778 |
| MsG0680034835.01.T01 | AT4G04890 | 47.815 | 755 | 285 | 16 | 26 | 745 | 57 | 737 | 0.0 | 664 |
| MsG0680034835.01.T01 | AT4G04890 | 47.815 | 755 | 285 | 16 | 26 | 745 | 57 | 737 | 0.0 | 664 |
| MsG0680034835.01.T01 | AT4G21750 | 46.527 | 763 | 297 | 14 | 29 | 745 | 62 | 759 | 0.0 | 654 |
| MsG0680034835.01.T01 | AT4G21750 | 46.527 | 763 | 297 | 14 | 29 | 745 | 62 | 759 | 0.0 | 654 |
| MsG0680034835.01.T01 | AT4G21750 | 46.527 | 763 | 297 | 14 | 29 | 745 | 62 | 759 | 0.0 | 654 |
| MsG0680034835.01.T01 | AT4G21750 | 46.527 | 763 | 297 | 14 | 29 | 745 | 62 | 759 | 0.0 | 654 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 44.041 | 772 | 310 | 12 | 10 | 748 | 39 | 721 | 0.0 | 636 |
| MsG0680034835.01.T01 | AT1G05230 | 43.523 | 772 | 312 | 12 | 10 | 748 | 39 | 719 | 0.0 | 625 |
| MsG0680034835.01.T01 | AT4G00730 | 43.534 | 781 | 321 | 15 | 2 | 747 | 107 | 802 | 0.0 | 598 |
| MsG0680034835.01.T01 | AT3G61150 | 42.634 | 767 | 327 | 15 | 28 | 748 | 109 | 808 | 0.0 | 592 |
| MsG0680034835.01.T01 | AT1G05230 | 47.458 | 590 | 255 | 10 | 2 | 564 | 47 | 608 | 0.0 | 540 |
| MsG0680034835.01.T01 | AT5G46880 | 40.845 | 781 | 329 | 17 | 20 | 743 | 102 | 806 | 1.81e-179 | 534 |
| MsG0680034835.01.T01 | AT5G46880 | 40.845 | 781 | 329 | 17 | 20 | 743 | 102 | 806 | 1.81e-179 | 534 |
| MsG0680034835.01.T01 | AT5G46880 | 40.845 | 781 | 329 | 17 | 20 | 743 | 102 | 806 | 1.81e-179 | 534 |
| MsG0680034835.01.T01 | AT5G52170 | 39.867 | 750 | 317 | 15 | 23 | 747 | 42 | 682 | 6.74e-175 | 518 |
| MsG0680034835.01.T01 | AT5G52170 | 39.867 | 750 | 317 | 15 | 23 | 747 | 42 | 682 | 6.74e-175 | 518 |
| MsG0680034835.01.T01 | AT5G52170 | 39.575 | 753 | 320 | 15 | 23 | 747 | 42 | 687 | 1.95e-173 | 514 |
| MsG0680034835.01.T01 | AT3G03260 | 38.581 | 775 | 355 | 19 | 9 | 746 | 7 | 697 | 7.59e-167 | 498 |
| MsG0680034835.01.T01 | AT1G79840 | 36.063 | 757 | 331 | 21 | 27 | 743 | 41 | 684 | 3.20e-153 | 462 |
| MsG0680034835.01.T01 | AT1G79840 | 36.063 | 757 | 331 | 21 | 27 | 743 | 41 | 684 | 3.20e-153 | 462 |
| MsG0680034835.01.T01 | AT1G79840 | 36.063 | 757 | 331 | 21 | 27 | 743 | 99 | 742 | 1.24e-152 | 462 |
| MsG0680034835.01.T01 | AT1G79840 | 36.063 | 757 | 331 | 21 | 27 | 743 | 128 | 771 | 1.21e-151 | 461 |
| MsG0680034835.01.T01 | AT5G17320 | 36.714 | 779 | 360 | 17 | 21 | 745 | 18 | 717 | 2.23e-146 | 445 |
| MsG0680034835.01.T01 | AT2G32370 | 35.595 | 781 | 356 | 20 | 12 | 748 | 48 | 725 | 1.73e-144 | 441 |
| MsG0680034835.01.T01 | AT4G17710 | 35.771 | 752 | 310 | 17 | 29 | 743 | 88 | 703 | 3.20e-143 | 437 |
| MsG0680034835.01.T01 | AT1G34650 | 36.632 | 778 | 357 | 18 | 21 | 745 | 13 | 707 | 2.78e-136 | 419 |
| MsG0680034835.01.T01 | AT1G79840 | 39.478 | 575 | 260 | 19 | 27 | 560 | 99 | 626 | 2.04e-132 | 406 |
| MsG0680034835.01.T01 | AT4G00730 | 46.868 | 463 | 196 | 9 | 2 | 432 | 107 | 551 | 6.56e-131 | 400 |
| MsG0680034835.01.T01 | AT3G03260 | 40.506 | 553 | 274 | 12 | 9 | 527 | 7 | 538 | 2.06e-128 | 393 |
| MsG0680034835.01.T01 | AT4G25530 | 31.459 | 747 | 378 | 16 | 29 | 744 | 40 | 683 | 2.81e-112 | 355 |
| MsG0680034835.01.T01 | AT1G79840 | 39.606 | 457 | 190 | 16 | 27 | 443 | 99 | 509 | 9.82e-94 | 302 |
| MsG0680034835.01.T01 | AT5G07260 | 21.812 | 596 | 321 | 18 | 96 | 663 | 11 | 489 | 4.42e-29 | 122 |
| MsG0680034835.01.T01 | AT5G07260 | 21.477 | 596 | 318 | 18 | 96 | 663 | 11 | 484 | 1.44e-28 | 121 |
| MsG0680034835.01.T01 | AT5G60690 | 37.121 | 132 | 56 | 5 | 18 | 122 | 7 | 138 | 6.11e-14 | 76.3 |
| MsG0680034835.01.T01 | AT1G30490 | 34.821 | 112 | 65 | 2 | 15 | 118 | 4 | 115 | 1.98e-11 | 68.2 |
Find 167 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTGGTTGAAATGTTTA+TGG | 0.134213 | 6:+95222335 | MsG0680034835.01.T01:CDS |
| GTAAACTACTAACCATTATT+TGG | 0.141492 | 6:-95224660 | None:intergenic |
| GACTTATCAATGGGAAATTT+TGG | 0.144806 | 6:+95221983 | MsG0680034835.01.T01:CDS |
| CGCAAATTGAGCAAGGTTTA+TGG | 0.148416 | 6:+95222743 | MsG0680034835.01.T01:CDS |
| CTCCTAGACAGATCAAATTT+TGG | 0.209657 | 6:+95220721 | MsG0680034835.01.T01:CDS |
| ACTATTGAAGTTATCTCTTC+TGG | 0.240170 | 6:+95222500 | MsG0680034835.01.T01:CDS |
| CGGTGCCATCGACTTCCTTC+TGG | 0.247566 | 6:+95222823 | MsG0680034835.01.T01:CDS |
| AACAATTTGCTCCGCAATTT+CGG | 0.248750 | 6:+95222803 | MsG0680034835.01.T01:CDS |
| GAGTCTGTTGCAACTGTTAA+TGG | 0.255130 | 6:+95224703 | MsG0680034835.01.T01:CDS |
| GCAACTGTTAATGGACTTAT+TGG | 0.266967 | 6:+95224712 | MsG0680034835.01.T01:CDS |
| AACAGTTGCATTCCAAATAA+TGG | 0.273585 | 6:+95224648 | MsG0680034835.01.T01:CDS |
| TAGTGGGATGTTCTTTCTAA+TGG | 0.297445 | 6:+95223857 | MsG0680034835.01.T01:intron |
| TTCATTGATGTTAATTCAAT+TGG | 0.303666 | 6:-95224442 | None:intergenic |
| GAGGTCACGTGTTCAAATTC+TGG | 0.307280 | 6:+95224054 | MsG0680034835.01.T01:intron |
| GGTCACTTGGATTGAACATT+TGG | 0.308899 | 6:+95222965 | MsG0680034835.01.T01:intron |
| TGCATAGTTGATGAACTTCC+AGG | 0.324010 | 6:-95222052 | None:intergenic |
| ATCTATAGTGGAGCTGCATT+TGG | 0.334195 | 6:+95223032 | MsG0680034835.01.T01:CDS |
| TGCAGACTAATGAGCCTCTA+TGG | 0.337717 | 6:+95222170 | MsG0680034835.01.T01:CDS |
| CACATTCCAGTAACACCTTC+AGG | 0.343396 | 6:+95224493 | MsG0680034835.01.T01:CDS |
| GCAACTCCATCTCTGTGCTT+AGG | 0.352073 | 6:+95223927 | MsG0680034835.01.T01:CDS |
| GATTGGTCTTCCAATGTATT+TGG | 0.360707 | 6:-95221918 | None:intergenic |
| TGAAAGACTTGCTTGTTCTA+TGG | 0.364342 | 6:+95223091 | MsG0680034835.01.T01:CDS |
| ATGTGAGAATATAGCTATAA+GGG | 0.368026 | 6:+95221201 | MsG0680034835.01.T01:CDS |
| GTGAAACCTGAAGGTGTTAC+TGG | 0.378283 | 6:-95224499 | None:intergenic |
| GCAAATTGAGCAAGGTTTAT+GGG | 0.381720 | 6:+95222744 | MsG0680034835.01.T01:CDS |
| TTCATCATTGGACTTATCAA+TGG | 0.382138 | 6:+95221973 | MsG0680034835.01.T01:CDS |
| AAGAAATTGAAAACAGTTTG+TGG | 0.386401 | 6:-95223715 | None:intergenic |
| TGCAACCTTTGTTTCTCATC+AGG | 0.387813 | 6:-95220675 | None:intergenic |
| ACCAATTCACATTTCATCAT+TGG | 0.388149 | 6:+95221961 | MsG0680034835.01.T01:CDS |
| TCCTAGTGGTTCTATGCAAT+TGG | 0.398885 | 6:+95222535 | MsG0680034835.01.T01:CDS |
| CTAGAGGAGAGACTGTTTCC+AGG | 0.399038 | 6:-95224150 | None:intergenic |
| CATGAACGCTCACACGTATA+AGG | 0.400715 | 6:-95224201 | None:intergenic |
| GAGAATCAGAAGAACCTTCA+TGG | 0.402346 | 6:-95220436 | None:intergenic |
| GATGTGAGAATATAGCTATA+AGG | 0.404730 | 6:+95221200 | MsG0680034835.01.T01:CDS |
| CAACTCCATCTCTGTGCTTA+GGG | 0.406270 | 6:+95223928 | MsG0680034835.01.T01:CDS |
| CACTTCCACCATTGTTCCCT+AGG | 0.407591 | 6:-95224612 | None:intergenic |
| TTTGGTGGGCATGGAATGGT+TGG | 0.409505 | 6:+95222001 | MsG0680034835.01.T01:CDS |
| ATTACCTTGGAGTAGCCATT+AGG | 0.412515 | 6:-95222865 | None:intergenic |
| TCTCGTGTTGTTATCATGAA+TGG | 0.413589 | 6:+95222309 | MsG0680034835.01.T01:CDS |
| TATAGAAATGCTATCTATAG+TGG | 0.415183 | 6:+95223020 | MsG0680034835.01.T01:CDS |
| TTCATTCAAGACATGCCTAA+TGG | 0.418765 | 6:+95222850 | MsG0680034835.01.T01:CDS |
| TTTCTATAAAGCCTATGAAC+TGG | 0.420383 | 6:-95223005 | None:intergenic |
| ATGCAATGGAAGAGATGATT+AGG | 0.426158 | 6:+95222143 | MsG0680034835.01.T01:CDS |
| CTTGCCATGGTCACAATAGT+AGG | 0.426173 | 6:-95222476 | None:intergenic |
| GGTGGGCATGGAATGGTTGG+AGG | 0.429152 | 6:+95222004 | MsG0680034835.01.T01:CDS |
| CTTGATCTTGATCTTCTACC+TGG | 0.430302 | 6:+95222034 | MsG0680034835.01.T01:CDS |
| GATAACAATAACAATCTTCA+AGG | 0.430765 | 6:+95224547 | MsG0680034835.01.T01:CDS |
| GTGCATCAGCTAGTCATAGA+TGG | 0.431673 | 6:+95223575 | MsG0680034835.01.T01:CDS |
| TTAAAGCAGCTTTGATGTGT+TGG | 0.431801 | 6:-95224744 | None:intergenic |
| CTGCTCTTTCCCTCAGGTGA+TGG | 0.432769 | 6:-95223502 | None:intergenic |
| AAGAAACAATCATCATTGAT+TGG | 0.440524 | 6:-95221265 | None:intergenic |
| GAAGTTGCTCATATTGCAAA+TGG | 0.443252 | 6:+95223893 | MsG0680034835.01.T01:CDS |
| AAAACAGTTTGTGGAGGGAG+AGG | 0.444588 | 6:-95223706 | None:intergenic |
| GGTTTCACAATCACTTCTGA+TGG | 0.448901 | 6:+95224514 | MsG0680034835.01.T01:CDS |
| AGTTATCTCTTCTGGAATGA+TGG | 0.450155 | 6:+95222508 | MsG0680034835.01.T01:CDS |
| ATCATGCTGCTCTTTCCCTC+AGG | 0.452513 | 6:-95223508 | None:intergenic |
| TCCAATGATGAAATGTGAAT+TGG | 0.452865 | 6:-95221962 | None:intergenic |
| TATCATGAATGGCTTAGCTT+TGG | 0.453058 | 6:+95222320 | MsG0680034835.01.T01:CDS |
| GTTTCTGCCACCCGTGATCT+CGG | 0.464633 | 6:+95223113 | MsG0680034835.01.T01:CDS |
| AGGGAGTCAGAGTTACTGTT+AGG | 0.465910 | 6:+95223620 | MsG0680034835.01.T01:CDS |
| ACTGGTGGAAGCTGTGTGAT+TGG | 0.466182 | 6:-95221935 | None:intergenic |
| CACACTTTCAGCTTTGAATG+AGG | 0.466242 | 6:+95223600 | MsG0680034835.01.T01:CDS |
| AAGAAGTAGAATTCTCTGAT+AGG | 0.466986 | 6:-95222709 | None:intergenic |
| TCATCATTGGACTTATCAAT+GGG | 0.471502 | 6:+95221974 | MsG0680034835.01.T01:CDS |
| GAAAGGCAAGCTGGTTGGTA+AGG | 0.487355 | 6:-95222082 | None:intergenic |
| TTTGTCATGAGGAAAATCAT+AGG | 0.490913 | 6:-95222782 | None:intergenic |
| GTTAAGCAGAGAATTAGCTT+TGG | 0.491594 | 6:+95220698 | MsG0680034835.01.T01:CDS |
| GAAAGCTGTGTGGATTCATC+AGG | 0.491631 | 6:+95224400 | MsG0680034835.01.T01:CDS |
| CTAGGGAACAATGGTGGAAG+TGG | 0.494985 | 6:+95224613 | MsG0680034835.01.T01:CDS |
| ACCAGCTTGCCTTTCTGACA+TGG | 0.500844 | 6:+95222090 | MsG0680034835.01.T01:CDS |
| TATGTGCAGCTACTACCATT+TGG | 0.503380 | 6:+95223680 | MsG0680034835.01.T01:CDS |
| GAGTTTGATTTCATCCATAG+AGG | 0.504517 | 6:-95222184 | None:intergenic |
| GCATCAACAAGCTCAAACCT+AGG | 0.505348 | 6:+95224595 | MsG0680034835.01.T01:CDS |
| CTTTGTTTCTCATCAGGATG+AGG | 0.506519 | 6:-95220669 | None:intergenic |
| TCAATTTCTTCAAAGATGAA+AGG | 0.508178 | 6:+95223728 | MsG0680034835.01.T01:CDS |
| CTGCATTTGGAGCTGAAAGA+TGG | 0.510050 | 6:+95223045 | MsG0680034835.01.T01:CDS |
| GAAATGTGAATTGGTGCAAC+TGG | 0.511399 | 6:-95221953 | None:intergenic |
| GAAACAGTCTCTCCTCTAGC+AGG | 0.511428 | 6:+95224076 | MsG0680034835.01.T01:CDS |
| GAAACAGTCTCTCCTCTAGC+AGG | 0.511428 | 6:+95224154 | MsG0680034835.01.T01:CDS |
| AGTGGAGCAAGTGGGTCCCC+TGG | 0.514639 | 6:+95220392 | MsG0680034835.01.T01:CDS |
| GCCACCCGTGATCTCGGTGG+AGG | 0.515311 | 6:+95223119 | MsG0680034835.01.T01:CDS |
| AATAACAATCTTCAAGGAAG+TGG | 0.515892 | 6:+95224553 | MsG0680034835.01.T01:CDS |
| AGCACAGAGATGGAGTTGCC+AGG | 0.521625 | 6:-95223923 | None:intergenic |
| TCCATGTCAGAAAGGCAAGC+TGG | 0.530766 | 6:-95222091 | None:intergenic |
| TATTCGCATTGAAGCTTCGA+GGG | 0.530981 | 6:+95222284 | MsG0680034835.01.T01:intron |
| GAGCTGATAACTGTCAACTA+AGG | 0.535625 | 6:+95221158 | MsG0680034835.01.T01:CDS |
| GTTATCTCTTCTGGAATGAT+GGG | 0.546482 | 6:+95222509 | MsG0680034835.01.T01:CDS |
| GATGGCTCACTACTCTTCAA+AGG | 0.546725 | 6:+95223063 | MsG0680034835.01.T01:CDS |
| GAACAGAAGGACTCAGATGA+AGG | 0.553957 | 6:+95220749 | MsG0680034835.01.T01:CDS |
| AGCATTGCTGCCAAATACAT+TGG | 0.554442 | 6:+95221908 | MsG0680034835.01.T01:CDS |
| CTTTCCTACTATTGTGACCA+TGG | 0.557478 | 6:+95222472 | MsG0680034835.01.T01:CDS |
| ACACTTTCAGCTTTGAATGA+GGG | 0.558221 | 6:+95223601 | MsG0680034835.01.T01:CDS |
| AATTGAAAACAGTTTGTGGA+GGG | 0.561046 | 6:-95223711 | None:intergenic |
| TACTGTACGCAAATTGAGCA+AGG | 0.562069 | 6:+95222736 | MsG0680034835.01.T01:CDS |
| GCACAGAGATGGAGTTGCCA+GGG | 0.562213 | 6:-95223922 | None:intergenic |
| AGTGGTAATGTTAATGCTGA+TGG | 0.563501 | 6:+95224571 | MsG0680034835.01.T01:CDS |
| AGATGAAAGGAAAAGATCAC+AGG | 0.565819 | 6:+95223741 | MsG0680034835.01.T01:CDS |
| ATCTCTTCTGGAATGATGGG+TGG | 0.566526 | 6:+95222512 | MsG0680034835.01.T01:CDS |
| GTGATCTGCCCCTCTTGTGG+TGG | 0.567379 | 6:+95221238 | MsG0680034835.01.T01:CDS |
| GTGGTCACGAGTTCAAATCC+TGG | 0.567461 | 6:+95224132 | MsG0680034835.01.T01:CDS |
| GTATACCTCCACCGAGATCA+CGG | 0.569764 | 6:-95223124 | None:intergenic |
| ACCATCTGCTAAACTTAACA+TGG | 0.570228 | 6:+95224681 | MsG0680034835.01.T01:CDS |
| CATCATCATCATCACCATGA+AGG | 0.573382 | 6:+95220422 | MsG0680034835.01.T01:CDS |
| AGTCGATGGCACCGAAATTG+CGG | 0.574598 | 6:-95222814 | None:intergenic |
| GCACATAGCACAACACCACT+AGG | 0.575221 | 6:-95223664 | None:intergenic |
| TGGATGAAATCAAACTCTGA+TGG | 0.581105 | 6:+95222190 | MsG0680034835.01.T01:CDS |
| TCAGCGATTCCATCACCTGA+GGG | 0.581584 | 6:+95223493 | MsG0680034835.01.T01:intron |
| CTACTATTGTGACCATGGCA+AGG | 0.582650 | 6:+95222477 | MsG0680034835.01.T01:CDS |
| AAATGTGCAACTCAAAGAAG+AGG | 0.585426 | 6:+95221312 | MsG0680034835.01.T01:CDS |
| AACCAAAATTTGATCTGTCT+AGG | 0.585787 | 6:-95220723 | None:intergenic |
| CTCGTGACCACTGTGTCAAG+CGG | 0.586053 | 6:-95224120 | None:intergenic |
| GGGAACAATGGTGGAAGTGG+AGG | 0.586180 | 6:+95224616 | MsG0680034835.01.T01:CDS |
| CTGAAGGTGTTACTGGAATG+TGG | 0.586831 | 6:-95224492 | None:intergenic |
| CTCGGTCTTTCTCCTGCTAG+AGG | 0.587010 | 6:-95224166 | None:intergenic |
| ATTGCAAATGGTTCTCACCC+TGG | 0.587680 | 6:+95223905 | MsG0680034835.01.T01:CDS |
| GTTAGGAAAAGTACTGAGCT+TGG | 0.589683 | 6:+95223637 | MsG0680034835.01.T01:CDS |
| TCTTACCCTAAGCACAGAGA+TGG | 0.590044 | 6:-95223933 | None:intergenic |
| TAGGAAAGAGAGCCATCCAC+TGG | 0.590384 | 6:-95222457 | None:intergenic |
| TCCATGTTAAGTTTAGCAGA+TGG | 0.590444 | 6:-95224682 | None:intergenic |
| CTCATTCAAAGCTGAAAGTG+TGG | 0.591958 | 6:-95223599 | None:intergenic |
| ATATTCGCATTGAAGCTTCG+AGG | 0.592812 | 6:+95222283 | MsG0680034835.01.T01:intron |
| TGGAGGGAGAGGTAGCCAAA+TGG | 0.596344 | 6:-95223695 | None:intergenic |
| ATAAGGAGGGCACATGTACT+CGG | 0.596450 | 6:-95224184 | None:intergenic |
| GGAGCAAATTGTTTGTCATG+AGG | 0.601230 | 6:-95222793 | None:intergenic |
| AACTTCAATAGTCCTTGCCA+TGG | 0.602161 | 6:-95222489 | None:intergenic |
| TATACCTCCACCGAGATCAC+GGG | 0.602328 | 6:-95223123 | None:intergenic |
| CTCATCCTGATGAGAAACAA+AGG | 0.606148 | 6:+95220670 | MsG0680034835.01.T01:CDS |
| AGCTCAAACCTAGGGAACAA+TGG | 0.607766 | 6:+95224604 | MsG0680034835.01.T01:CDS |
| TCTTGAATGAAGCAACCAGA+AGG | 0.608093 | 6:-95222838 | None:intergenic |
| TGTCAGAAAGGCAAGCTGGT+TGG | 0.608188 | 6:-95222087 | None:intergenic |
| GATTGGAGGACCACCACAAG+AGG | 0.608794 | 6:-95221248 | None:intergenic |
| AAACAATCATCATTGATTGG+AGG | 0.609512 | 6:-95221262 | None:intergenic |
| GAGTATCATAGTGGAGCAAG+TGG | 0.613997 | 6:+95220383 | MsG0680034835.01.T01:CDS |
| TGACATTGCATCAAATGCAA+TGG | 0.614917 | 6:+95222129 | MsG0680034835.01.T01:CDS |
| ACACTGCTAATCAGATTCAA+AGG | 0.615484 | 6:+95220486 | MsG0680034835.01.T01:CDS |
| GATGAAGCTAGCACAAAGGA+TGG | 0.618354 | 6:+95223528 | MsG0680034835.01.T01:CDS |
| TTCAGCGATTCCATCACCTG+AGG | 0.619756 | 6:+95223492 | MsG0680034835.01.T01:intron |
| GTCAAGCGGAAACATGTACT+CGG | 0.624055 | 6:-95224106 | None:intergenic |
| GAACGCTCACACGTATAAGG+AGG | 0.626629 | 6:-95224198 | None:intergenic |
| GGAATGATGGGTGGTCCTAG+TGG | 0.629709 | 6:+95222521 | MsG0680034835.01.T01:CDS |
| AAATTGAAAACAGTTTGTGG+AGG | 0.630363 | 6:-95223712 | None:intergenic |
| CATCAACAAGCTCAAACCTA+GGG | 0.632798 | 6:+95224596 | MsG0680034835.01.T01:CDS |
| AGAAGATCAAGATCAAGTGA+AGG | 0.633385 | 6:-95222028 | None:intergenic |
| AATTCTCTGATAGGAACAAG+TGG | 0.634478 | 6:-95222700 | None:intergenic |
| ATGTGAATTGGTGCAACTGG+TGG | 0.640938 | 6:-95221950 | None:intergenic |
| AACGCTCACACGTATAAGGA+GGG | 0.643015 | 6:-95224197 | None:intergenic |
| CTCGGTCTTACTCCTGCTAG+AGG | 0.644088 | 6:-95224088 | None:intergenic |
| AATGTGATCTGCCCCTCTTG+TGG | 0.645075 | 6:+95221235 | MsG0680034835.01.T01:CDS |
| ATTGGAGGACCACCACAAGA+GGG | 0.645788 | 6:-95221247 | None:intergenic |
| ACTGAGCTTGGTCAGCCTAG+TGG | 0.646545 | 6:+95223649 | MsG0680034835.01.T01:CDS |
| ACCTCCACCGAGATCACGGG+TGG | 0.647060 | 6:-95223120 | None:intergenic |
| CATGCCTAATGGCTACTCCA+AGG | 0.648553 | 6:+95222861 | MsG0680034835.01.T01:CDS |
| GAAGTGATTGTGAAACCTGA+AGG | 0.654254 | 6:-95224508 | None:intergenic |
| GAATCTGATTAGCAGTGTGA+CGG | 0.657531 | 6:-95220481 | None:intergenic |
| TCTGCCACCCGTGATCTCGG+TGG | 0.670940 | 6:+95223116 | MsG0680034835.01.T01:CDS |
| AGCAACCAGAAGGAAGTCGA+TGG | 0.671022 | 6:-95222828 | None:intergenic |
| TGAAGGTGTTACTGGAATGT+GGG | 0.675743 | 6:-95224491 | None:intergenic |
| GCATGATGAAGCTAGCACAA+AGG | 0.680662 | 6:+95223524 | MsG0680034835.01.T01:CDS |
| TCAAACCTAGGGAACAATGG+TGG | 0.694105 | 6:+95224607 | MsG0680034835.01.T01:CDS |
| TTGGAGGACCACCACAAGAG+GGG | 0.698087 | 6:-95221246 | None:intergenic |
| CATGTTTCCGCTTGACACAG+TGG | 0.703375 | 6:+95224113 | MsG0680034835.01.T01:CDS |
| ACCAATTGCATAGAACCACT+AGG | 0.707017 | 6:-95222536 | None:intergenic |
| AGTATCATAGTGGAGCAAGT+GGG | 0.711511 | 6:+95220384 | MsG0680034835.01.T01:CDS |
| TCTGATTAGCAGTGTGACGG+TGG | 0.712245 | 6:-95220478 | None:intergenic |
| TCAATGAATGTAGCAATGAG+TGG | 0.714910 | 6:+95224457 | MsG0680034835.01.T01:CDS |
| GATACTTCAAGAAAGCTGTG+TGG | 0.771950 | 6:+95224390 | MsG0680034835.01.T01:CDS |
| ATGATGATGATGATCACCAG+GGG | 0.774959 | 6:-95220408 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATATATAAAAAAA+TGG | - | Chr6:95220609-95220628 | None:intergenic | 0.0% |
| !! | TTATTATTATTATAAAATTT+AGG | + | Chr6:95221008-95221027 | MsG0680034835.01.T01:intron | 0.0% |
| !! | ATAAAAAATAAATAAAATGG+AGG | - | Chr6:95223966-95223985 | None:intergenic | 10.0% |
| !! | GAATTAAAAATATATTAACT+CGG | + | Chr6:95221564-95221583 | MsG0680034835.01.T01:intron | 10.0% |
| !! | TGGATAAAAAATAAATAAAA+TGG | - | Chr6:95223969-95223988 | None:intergenic | 10.0% |
| !! | TTGAATAAAGTTATAATATT+TGG | - | Chr6:95221353-95221372 | None:intergenic | 10.0% |
| !!! | ATAATTATGTGTTATTTTAA+TGG | + | Chr6:95221100-95221119 | MsG0680034835.01.T01:intron | 10.0% |
| !! | AAAATTAAAACAAGTAAACA+TGG | - | Chr6:95221812-95221831 | None:intergenic | 15.0% |
| !! | ATACTGAAGAAAAAAAAAAT+AGG | - | Chr6:95220636-95220655 | None:intergenic | 15.0% |
| !! | TACTGAAGAAAAAAAAAATA+GGG | - | Chr6:95220635-95220654 | None:intergenic | 15.0% |
| !!! | ATTTACAATGTACTTTTATA+TGG | + | Chr6:95221840-95221859 | MsG0680034835.01.T01:intron | 15.0% |
| !!! | TGTGTATTTTATATTTATGT+TGG | + | Chr6:95220904-95220923 | MsG0680034835.01.T01:intron | 15.0% |
| !!! | TTAATAAAGCATTAATTCAA+AGG | - | Chr6:95222895-95222914 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTTTTGTTTAGT+GGG | + | Chr6:95223841-95223860 | MsG0680034835.01.T01:intron | 15.0% |
| !!! | TTTTTTTTTGTTTTGTTTAG+TGG | + | Chr6:95223840-95223859 | MsG0680034835.01.T01:intron | 15.0% |
| !! | AAAGAAACATGAATTAATGA+AGG | + | Chr6:95220817-95220836 | MsG0680034835.01.T01:intron | 20.0% |
| !! | AAATTGAACAAAACATTTGT+AGG | + | Chr6:95221509-95221528 | MsG0680034835.01.T01:intron | 20.0% |
| !! | AATTGAACAAAACATTTGTA+GGG | + | Chr6:95221510-95221529 | MsG0680034835.01.T01:intron | 20.0% |
| !! | ATTAGAATCGAAATTAAATC+CGG | - | Chr6:95224313-95224332 | None:intergenic | 20.0% |
| !! | ATTATAAAATTTAGGAGAGT+TGG | + | Chr6:95221016-95221035 | MsG0680034835.01.T01:intron | 20.0% |
| !! | TAAAAAAACATTTCATCCTA+AGG | - | Chr6:95223808-95223827 | None:intergenic | 20.0% |
| !! | TGATAATCGATATACAAATT+CGG | - | Chr6:95222609-95222628 | None:intergenic | 20.0% |
| !! | TTATAAAATTTAGGAGAGTT+GGG | + | Chr6:95221017-95221036 | MsG0680034835.01.T01:intron | 20.0% |
| !! | TTCATTGATGTTAATTCAAT+TGG | - | Chr6:95224445-95224464 | None:intergenic | 20.0% |
| !!! | AAAAAGATCGTGATTTTTAT+AGG | + | Chr6:95221542-95221561 | MsG0680034835.01.T01:intron | 20.0% |
| !!! | ATAAAGTTTGTGTATTTTTC+TGG | + | Chr6:95220943-95220962 | MsG0680034835.01.T01:intron | 20.0% |
| !!! | CTTCTAAAACAGTTATATTA+TGG | - | Chr6:95223291-95223310 | None:intergenic | 20.0% |
| !!! | CTTTTATATGGTCAATTAAA+TGG | + | Chr6:95221852-95221871 | MsG0680034835.01.T01:intron | 20.0% |
| !!! | GTTACTCTTGTATATTTTAT+AGG | + | Chr6:95222944-95222963 | MsG0680034835.01.T01:intron | 20.0% |
| !!! | TCAAATTGTGTATTTTTTTC+TGG | + | Chr6:95220861-95220880 | MsG0680034835.01.T01:intron | 20.0% |
| !!! | TGTGAATTTTCAAATGTAAT+AGG | + | Chr6:95224340-95224359 | MsG0680034835.01.T01:intron | 20.0% |
| ! | AAGAAACAATCATCATTGAT+TGG | - | Chr6:95221268-95221287 | None:intergenic | 25.0% |
| ! | AAGAAATTGAAAACAGTTTG+TGG | - | Chr6:95223718-95223737 | None:intergenic | 25.0% |
| ! | ATGTGAGAATATAGCTATAA+GGG | + | Chr6:95221201-95221220 | MsG0680034835.01.T01:CDS | 25.0% |
| ! | ATTCAAAGGTTATATTACCT+TGG | - | Chr6:95222881-95222900 | None:intergenic | 25.0% |
| ! | CTAATCTTGAAAACTATGAA+AGG | + | Chr6:95222223-95222242 | MsG0680034835.01.T01:intron | 25.0% |
| ! | GATAACAATAACAATCTTCA+AGG | + | Chr6:95224547-95224566 | MsG0680034835.01.T01:CDS | 25.0% |
| ! | GTAAACTACTAACCATTATT+TGG | - | Chr6:95224663-95224682 | None:intergenic | 25.0% |
| ! | TATAGAAATGCTATCTATAG+TGG | + | Chr6:95223020-95223039 | MsG0680034835.01.T01:CDS | 25.0% |
| ! | TCAATTTCTTCAAAGATGAA+AGG | + | Chr6:95223728-95223747 | MsG0680034835.01.T01:CDS | 25.0% |
| !! | CAGCAATATAAAGGATTTTA+AGG | - | Chr6:95221757-95221776 | None:intergenic | 25.0% |
| !! | TGTATATTTTATAGGTCACT+TGG | + | Chr6:95222952-95222971 | MsG0680034835.01.T01:intron | 25.0% |
| !!! | GTACAATTTTAGTCTCTATA+AGG | + | Chr6:95221482-95221501 | MsG0680034835.01.T01:intron | 25.0% |
| !!! | GTGTTATTTTAATGGATTTG+TGG | + | Chr6:95221108-95221127 | MsG0680034835.01.T01:intron | 25.0% |
| !!! | TATAAAGGATTTTAAGGTCT+CGG | - | Chr6:95221751-95221770 | None:intergenic | 25.0% |
| !!! | TTATCCACTTTGTTTTCAAT+CGG | + | Chr6:95223982-95224001 | MsG0680034835.01.T01:intron | 25.0% |
| !!! | TTTTAATGGATTTGTGGTTT+TGG | + | Chr6:95221114-95221133 | MsG0680034835.01.T01:intron | 25.0% |
| !!! | TTTTTTCTTCAGTATGTTCA+AGG | + | Chr6:95220641-95220660 | MsG0680034835.01.T01:intron | 25.0% |
| AAATTGAAAACAGTTTGTGG+AGG | - | Chr6:95223715-95223734 | None:intergenic | 30.0% | |
| AACACGTTGCAACTAAAAAA+AGG | - | Chr6:95224235-95224254 | None:intergenic | 30.0% | |
| AACAGTTGCATTCCAAATAA+TGG | + | Chr6:95224648-95224667 | MsG0680034835.01.T01:CDS | 30.0% | |
| AACCAAAATTTGATCTGTCT+AGG | - | Chr6:95220726-95220745 | None:intergenic | 30.0% | |
| AAGAAGTAGAATTCTCTGAT+AGG | - | Chr6:95222712-95222731 | None:intergenic | 30.0% | |
| AAGACAAAAATCCAGTTCAT+AGG | + | Chr6:95222994-95223013 | MsG0680034835.01.T01:CDS | 30.0% | |
| AATAACAATCTTCAAGGAAG+TGG | + | Chr6:95224553-95224572 | MsG0680034835.01.T01:CDS | 30.0% | |
| AATTGAAAACAGTTTGTGGA+GGG | - | Chr6:95223714-95223733 | None:intergenic | 30.0% | |
| ACACGTTGCAACTAAAAAAA+GGG | - | Chr6:95224234-95224253 | None:intergenic | 30.0% | |
| ACCAATTCACATTTCATCAT+TGG | + | Chr6:95221961-95221980 | MsG0680034835.01.T01:CDS | 30.0% | |
| ACTATTGAAGTTATCTCTTC+TGG | + | Chr6:95222500-95222519 | MsG0680034835.01.T01:CDS | 30.0% | |
| CAATTACAGCAGCAATATAA+AGG | - | Chr6:95221766-95221785 | None:intergenic | 30.0% | |
| CAATTGCAACCAAAACATAA+AGG | - | Chr6:95221676-95221695 | None:intergenic | 30.0% | |
| GAACATGAATAAGTACTTAC+TGG | - | Chr6:95222363-95222382 | None:intergenic | 30.0% | |
| GATGTGAGAATATAGCTATA+AGG | + | Chr6:95221200-95221219 | MsG0680034835.01.T01:CDS | 30.0% | |
| TCATCATTGGACTTATCAAT+GGG | + | Chr6:95221974-95221993 | MsG0680034835.01.T01:CDS | 30.0% | |
| TCCAATGATGAAATGTGAAT+TGG | - | Chr6:95221965-95221984 | None:intergenic | 30.0% | |
| TGATTTGATTCTATGACCTT+AGG | + | Chr6:95223789-95223808 | MsG0680034835.01.T01:intron | 30.0% | |
| TGTTCCCTAAGACTAATAAT+CGG | + | Chr6:95222247-95222266 | MsG0680034835.01.T01:intron | 30.0% | |
| TTCATCATTGGACTTATCAA+TGG | + | Chr6:95221973-95221992 | MsG0680034835.01.T01:CDS | 30.0% | |
| TTTCTATAAAGCCTATGAAC+TGG | - | Chr6:95223008-95223027 | None:intergenic | 30.0% | |
| TTTGGTTGCAATTGCAATTA+CGG | + | Chr6:95221682-95221701 | MsG0680034835.01.T01:intron | 30.0% | |
| TTTGTCATGAGGAAAATCAT+AGG | - | Chr6:95222785-95222804 | None:intergenic | 30.0% | |
| ! | AAACAATCATCATTGATTGG+AGG | - | Chr6:95221265-95221284 | None:intergenic | 30.0% |
| ! | AGCTTTGGTTGAAATGTTTA+TGG | + | Chr6:95222335-95222354 | MsG0680034835.01.T01:CDS | 30.0% |
| ! | CAAATTTTACGTAGCAAATG+TGG | + | Chr6:95221707-95221726 | MsG0680034835.01.T01:intron | 30.0% |
| ! | GACTTATCAATGGGAAATTT+TGG | + | Chr6:95221983-95222002 | MsG0680034835.01.T01:CDS | 30.0% |
| ! | TTATCAATGGGAAATTTTGG+TGG | + | Chr6:95221986-95222005 | MsG0680034835.01.T01:CDS | 30.0% |
| ! | TTTGTTTGCATTTTACTGCA+AGG | + | Chr6:95223346-95223365 | MsG0680034835.01.T01:intron | 30.0% |
| !! | TATCAATGGGAAATTTTGGT+GGG | + | Chr6:95221987-95222006 | MsG0680034835.01.T01:CDS | 30.0% |
| !! | TCAACCGATTATTAGTCTTA+GGG | - | Chr6:95222254-95222273 | None:intergenic | 30.0% |
| !! | TTCAACCGATTATTAGTCTT+AGG | - | Chr6:95222255-95222274 | None:intergenic | 30.0% |
| !!! | AATTTTGGTTTCAGAACAGA+AGG | + | Chr6:95220736-95220755 | MsG0680034835.01.T01:CDS | 30.0% |
| !!! | ATTTGTGGTTTTGGTTAAAC+AGG | + | Chr6:95221123-95221142 | MsG0680034835.01.T01:intron | 30.0% |
| !!! | GGTCTTATTAGTTTTTCTCA+TGG | + | Chr6:95220838-95220857 | MsG0680034835.01.T01:intron | 30.0% |
| !!! | TACAACAGTTTTAGAGACAT+CGG | + | Chr6:95223251-95223270 | MsG0680034835.01.T01:intron | 30.0% |
| AAATGTGCAACTCAAAGAAG+AGG | + | Chr6:95221312-95221331 | MsG0680034835.01.T01:CDS | 35.0% | |
| AAATTAAATCCGGCGAACTA+GGG | - | Chr6:95224303-95224322 | None:intergenic | 35.0% | |
| AATTCTCTGATAGGAACAAG+TGG | - | Chr6:95222703-95222722 | None:intergenic | 35.0% | |
| ACACTGCTAATCAGATTCAA+AGG | + | Chr6:95220486-95220505 | MsG0680034835.01.T01:CDS | 35.0% | |
| ACCATCTGCTAAACTTAACA+TGG | + | Chr6:95224681-95224700 | MsG0680034835.01.T01:CDS | 35.0% | |
| AGAAGATCAAGATCAAGTGA+AGG | - | Chr6:95222031-95222050 | None:intergenic | 35.0% | |
| AGATGAAAGGAAAAGATCAC+AGG | + | Chr6:95223741-95223760 | MsG0680034835.01.T01:CDS | 35.0% | |
| ATGCAATGGAAGAGATGATT+AGG | + | Chr6:95222143-95222162 | MsG0680034835.01.T01:CDS | 35.0% | |
| CCAAAACATAAAGGACTTTG+AGG | - | Chr6:95221667-95221686 | None:intergenic | 35.0% | |
| GAAGCTTCAATGCGAATATT+CGG | - | Chr6:95222282-95222301 | None:intergenic | 35.0% | |
| GAAGTTGCTCATATTGCAAA+TGG | + | Chr6:95223893-95223912 | MsG0680034835.01.T01:CDS | 35.0% | |
| GCAAATTGAGCAAGGTTTAT+GGG | + | Chr6:95222744-95222763 | MsG0680034835.01.T01:CDS | 35.0% | |
| GCAATTTGCAATCATGATTG+CGG | + | Chr6:95223223-95223242 | MsG0680034835.01.T01:intron | 35.0% | |
| TAGTGGGATGTTCTTTCTAA+TGG | + | Chr6:95223857-95223876 | MsG0680034835.01.T01:intron | 35.0% | |
| TATCATGAATGGCTTAGCTT+TGG | + | Chr6:95222320-95222339 | MsG0680034835.01.T01:CDS | 35.0% | |
| TCAATGAATGTAGCAATGAG+TGG | + | Chr6:95224457-95224476 | MsG0680034835.01.T01:CDS | 35.0% | |
| TCCATGTTAAGTTTAGCAGA+TGG | - | Chr6:95224685-95224704 | None:intergenic | 35.0% | |
| TGACATTGCATCAAATGCAA+TGG | + | Chr6:95222129-95222148 | MsG0680034835.01.T01:CDS | 35.0% | |
| TGCTTGTGATCTAAAAGTCA+TGG | + | Chr6:95223457-95223476 | MsG0680034835.01.T01:intron | 35.0% | |
| TGGATGAAATCAAACTCTGA+TGG | + | Chr6:95222190-95222209 | MsG0680034835.01.T01:CDS | 35.0% | |
| TTCATTCAAGACATGCCTAA+TGG | + | Chr6:95222850-95222869 | MsG0680034835.01.T01:CDS | 35.0% | |
| TTGCCGCAAATAAAGGTTTA+CGG | - | Chr6:95221613-95221632 | None:intergenic | 35.0% | |
| ! | AACAATTTGCTCCGCAATTT+CGG | + | Chr6:95222803-95222822 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | AGTGGTAATGTTAATGCTGA+TGG | + | Chr6:95224571-95224590 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | ATGCCGTAAACCTTTATTTG+CGG | + | Chr6:95221607-95221626 | MsG0680034835.01.T01:intron | 35.0% |
| ! | CAAATAAAGCTTTGACCATG+AGG | - | Chr6:95221052-95221071 | None:intergenic | 35.0% |
| ! | CAACATTTTGCCGCAAATAA+AGG | - | Chr6:95221620-95221639 | None:intergenic | 35.0% |
| ! | CCTCAAAGTCCTTTATGTTT+TGG | + | Chr6:95221664-95221683 | MsG0680034835.01.T01:intron | 35.0% |
| ! | CGCATTGATACATATGCATA+TGG | - | Chr6:95223403-95223422 | None:intergenic | 35.0% |
| ! | CTCCTAGACAGATCAAATTT+TGG | + | Chr6:95220721-95220740 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | GAGATTTTTCCATGTCAGAA+AGG | - | Chr6:95222102-95222121 | None:intergenic | 35.0% |
| ! | GAGTTTGATTTCATCCATAG+AGG | - | Chr6:95222187-95222206 | None:intergenic | 35.0% |
| ! | GTTAAGCAGAGAATTAGCTT+TGG | + | Chr6:95220698-95220717 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | TCTCGTGTTGTTATCATGAA+TGG | + | Chr6:95222309-95222328 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | TGAAAGACTTGCTTGTTCTA+TGG | + | Chr6:95223091-95223110 | MsG0680034835.01.T01:CDS | 35.0% |
| ! | TTAAAGCAGCTTTGATGTGT+TGG | - | Chr6:95224747-95224766 | None:intergenic | 35.0% |
| !! | ACACTTTCAGCTTTGAATGA+GGG | + | Chr6:95223601-95223620 | MsG0680034835.01.T01:CDS | 35.0% |
| !! | AGTTATCTCTTCTGGAATGA+TGG | + | Chr6:95222508-95222527 | MsG0680034835.01.T01:CDS | 35.0% |
| !! | GATTGATTTTTCAGAACCAG+TGG | + | Chr6:95222441-95222460 | MsG0680034835.01.T01:intron | 35.0% |
| !! | GATTGGTCTTCCAATGTATT+TGG | - | Chr6:95221921-95221940 | None:intergenic | 35.0% |
| !! | GCAACTGTTAATGGACTTAT+TGG | + | Chr6:95224712-95224731 | MsG0680034835.01.T01:CDS | 35.0% |
| !! | GTTATCTCTTCTGGAATGAT+GGG | + | Chr6:95222509-95222528 | MsG0680034835.01.T01:CDS | 35.0% |
| !! | TGGTTCTAAATAACAGATGC+AGG | - | Chr6:95223383-95223402 | None:intergenic | 35.0% |
| AACTTCAATAGTCCTTGCCA+TGG | - | Chr6:95222492-95222511 | None:intergenic | 40.0% | |
| AATTTGAACACGTGACCTCA+GGG | - | Chr6:95224053-95224072 | None:intergenic | 40.0% | |
| ACCAATTGCATAGAACCACT+AGG | - | Chr6:95222539-95222558 | None:intergenic | 40.0% | |
| AGCATTGCTGCCAAATACAT+TGG | + | Chr6:95221908-95221927 | MsG0680034835.01.T01:CDS | 40.0% | |
| ATATTCGCATTGAAGCTTCG+AGG | + | Chr6:95222283-95222302 | MsG0680034835.01.T01:intron | 40.0% | |
| ATTACCTTGGAGTAGCCATT+AGG | - | Chr6:95222868-95222887 | None:intergenic | 40.0% | |
| CATCAACAAGCTCAAACCTA+GGG | + | Chr6:95224596-95224615 | MsG0680034835.01.T01:CDS | 40.0% | |
| CATCATCATCATCACCATGA+AGG | + | Chr6:95220422-95220441 | MsG0680034835.01.T01:CDS | 40.0% | |
| CGCAAATTGAGCAAGGTTTA+TGG | + | Chr6:95222743-95222762 | MsG0680034835.01.T01:CDS | 40.0% | |
| CTCATCCTGATGAGAAACAA+AGG | + | Chr6:95220670-95220689 | MsG0680034835.01.T01:CDS | 40.0% | |
| CTCATTCAAAGCTGAAAGTG+TGG | - | Chr6:95223602-95223621 | None:intergenic | 40.0% | |
| CTTGATCTTGATCTTCTACC+TGG | + | Chr6:95222034-95222053 | MsG0680034835.01.T01:CDS | 40.0% | |
| CTTTCCTACTATTGTGACCA+TGG | + | Chr6:95222472-95222491 | MsG0680034835.01.T01:CDS | 40.0% | |
| GAAATGTGAATTGGTGCAAC+TGG | - | Chr6:95221956-95221975 | None:intergenic | 40.0% | |
| GAAATTAAATCCGGCGAACT+AGG | - | Chr6:95224304-95224323 | None:intergenic | 40.0% | |
| GAAGTGATTGTGAAACCTGA+AGG | - | Chr6:95224511-95224530 | None:intergenic | 40.0% | |
| GAATCTGATTAGCAGTGTGA+CGG | - | Chr6:95220484-95220503 | None:intergenic | 40.0% | |
| GAGAATCAGAAGAACCTTCA+TGG | - | Chr6:95220439-95220458 | None:intergenic | 40.0% | |
| GAGCTGATAACTGTCAACTA+AGG | + | Chr6:95221158-95221177 | MsG0680034835.01.T01:CDS | 40.0% | |
| GAGTCTGTTGCAACTGTTAA+TGG | + | Chr6:95224703-95224722 | MsG0680034835.01.T01:CDS | 40.0% | |
| GATACTTCAAGAAAGCTGTG+TGG | + | Chr6:95224390-95224409 | MsG0680034835.01.T01:CDS | 40.0% | |
| GCAATGTTATAATTGTGCCG+AGG | - | Chr6:95224020-95224039 | None:intergenic | 40.0% | |
| GGAGCAAATTGTTTGTCATG+AGG | - | Chr6:95222796-95222815 | None:intergenic | 40.0% | |
| GGTCACTTGGATTGAACATT+TGG | + | Chr6:95222965-95222984 | MsG0680034835.01.T01:intron | 40.0% | |
| GGTTTCACAATCACTTCTGA+TGG | + | Chr6:95224514-95224533 | MsG0680034835.01.T01:CDS | 40.0% | |
| TACTGTACGCAAATTGAGCA+AGG | + | Chr6:95222736-95222755 | MsG0680034835.01.T01:CDS | 40.0% | |
| TATGTGCAGCTACTACCATT+TGG | + | Chr6:95223680-95223699 | MsG0680034835.01.T01:CDS | 40.0% | |
| TATTCGCATTGAAGCTTCGA+GGG | + | Chr6:95222284-95222303 | MsG0680034835.01.T01:intron | 40.0% | |
| TCTTGAATGAAGCAACCAGA+AGG | - | Chr6:95222841-95222860 | None:intergenic | 40.0% | |
| ! | AGGGGCAGATCACATTTTTA+AGG | - | Chr6:95221231-95221250 | None:intergenic | 40.0% |
| ! | AGTATCATAGTGGAGCAAGT+GGG | + | Chr6:95220384-95220403 | MsG0680034835.01.T01:CDS | 40.0% |
| ! | ATCTATAGTGGAGCTGCATT+TGG | + | Chr6:95223032-95223051 | MsG0680034835.01.T01:CDS | 40.0% |
| ! | ATGATGATGATGATCACCAG+GGG | - | Chr6:95220411-95220430 | None:intergenic | 40.0% |
| ! | CTCACCGATTGAAAACAAAG+TGG | - | Chr6:95223989-95224008 | None:intergenic | 40.0% |
| ! | CTTTGTTTCTCATCAGGATG+AGG | - | Chr6:95220672-95220691 | None:intergenic | 40.0% |
| ! | GATGATGATGATGATCACCA+GGG | - | Chr6:95220412-95220431 | None:intergenic | 40.0% |
| ! | GGGGCAGATCACATTTTTAA+GGG | - | Chr6:95221230-95221249 | None:intergenic | 40.0% |
| ! | TCCTAGTGGTTCTATGCAAT+TGG | + | Chr6:95222535-95222554 | MsG0680034835.01.T01:CDS | 40.0% |
| ! | TGATGATGATGATGATCACC+AGG | - | Chr6:95220413-95220432 | None:intergenic | 40.0% |
| ! | TGCAACCTTTGTTTCTCATC+AGG | - | Chr6:95220678-95220697 | None:intergenic | 40.0% |
| !! | AAATTTTGGTGGGCATGGAA+TGG | + | Chr6:95221997-95222016 | MsG0680034835.01.T01:CDS | 40.0% |
| !! | CACACTTTCAGCTTTGAATG+AGG | + | Chr6:95223600-95223619 | MsG0680034835.01.T01:CDS | 40.0% |
| !! | GATTTTTCAGAACCAGTGGA+TGG | + | Chr6:95222445-95222464 | MsG0680034835.01.T01:intron | 40.0% |
| !! | GTTAGGAAAAGTACTGAGCT+TGG | + | Chr6:95223637-95223656 | MsG0680034835.01.T01:CDS | 40.0% |
| !! | TGAAGGTGTTACTGGAATGT+GGG | - | Chr6:95224494-95224513 | None:intergenic | 40.0% |
| !! | TGCATAGTTGATGAACTTCC+AGG | - | Chr6:95222055-95222074 | None:intergenic | 40.0% |
| !!! | CTTTGTTTTCAATCGGTGAG+AGG | + | Chr6:95223989-95224008 | MsG0680034835.01.T01:intron | 40.0% |
| AAAACAGTTTGTGGAGGGAG+AGG | - | Chr6:95223709-95223728 | None:intergenic | 45.0% | |
| AACGCTCACACGTATAAGGA+GGG | - | Chr6:95224200-95224219 | None:intergenic | 45.0% | |
| AACTGCAATCGTGGTTGCAT+CGG | + | Chr6:95223318-95223337 | MsG0680034835.01.T01:intron | 45.0% | |
| AGACATCGGCAACATGATTG+TGG | + | Chr6:95223265-95223284 | MsG0680034835.01.T01:intron | 45.0% | |
| AGCTCAAACCTAGGGAACAA+TGG | + | Chr6:95224604-95224623 | MsG0680034835.01.T01:CDS | 45.0% | |
| AGGGAGTCAGAGTTACTGTT+AGG | + | Chr6:95223620-95223639 | MsG0680034835.01.T01:CDS | 45.0% | |
| ATGTGAATTGGTGCAACTGG+TGG | - | Chr6:95221953-95221972 | None:intergenic | 45.0% | |
| ATTGCAAATGGTTCTCACCC+TGG | + | Chr6:95223905-95223924 | MsG0680034835.01.T01:CDS | 45.0% | |
| CAACTCCATCTCTGTGCTTA+GGG | + | Chr6:95223928-95223947 | MsG0680034835.01.T01:CDS | 45.0% | |
| CACATTCCAGTAACACCTTC+AGG | + | Chr6:95224493-95224512 | MsG0680034835.01.T01:CDS | 45.0% | |
| CATGAACGCTCACACGTATA+AGG | - | Chr6:95224204-95224223 | None:intergenic | 45.0% | |
| CTACTATTGTGACCATGGCA+AGG | + | Chr6:95222477-95222496 | MsG0680034835.01.T01:CDS | 45.0% | |
| CTTGCCATGGTCACAATAGT+AGG | - | Chr6:95222479-95222498 | None:intergenic | 45.0% | |
| GAAAGCTGTGTGGATTCATC+AGG | + | Chr6:95224400-95224419 | MsG0680034835.01.T01:CDS | 45.0% | |
| GAACAGAAGGACTCAGATGA+AGG | + | Chr6:95220749-95220768 | MsG0680034835.01.T01:CDS | 45.0% | |
| GAATTTGAACACGTGACCTC+AGG | - | Chr6:95224054-95224073 | None:intergenic | 45.0% | |
| GAGGTCACGTGTTCAAATTC+TGG | + | Chr6:95224054-95224073 | MsG0680034835.01.T01:intron | 45.0% | |
| GATGAAGCTAGCACAAAGGA+TGG | + | Chr6:95223528-95223547 | MsG0680034835.01.T01:CDS | 45.0% | |
| GATGGCTCACTACTCTTCAA+AGG | + | Chr6:95223063-95223082 | MsG0680034835.01.T01:CDS | 45.0% | |
| GCATCAACAAGCTCAAACCT+AGG | + | Chr6:95224595-95224614 | MsG0680034835.01.T01:CDS | 45.0% | |
| GCATGATGAAGCTAGCACAA+AGG | + | Chr6:95223524-95223543 | MsG0680034835.01.T01:CDS | 45.0% | |
| GTCAAGCGGAAACATGTACT+CGG | - | Chr6:95224109-95224128 | None:intergenic | 45.0% | |
| GTGCATCAGCTAGTCATAGA+TGG | + | Chr6:95223575-95223594 | MsG0680034835.01.T01:CDS | 45.0% | |
| TCAAACCTAGGGAACAATGG+TGG | + | Chr6:95224607-95224626 | MsG0680034835.01.T01:CDS | 45.0% | |
| TCTTACCCTAAGCACAGAGA+TGG | - | Chr6:95223936-95223955 | None:intergenic | 45.0% | |
| TGCAGACTAATGAGCCTCTA+TGG | + | Chr6:95222170-95222189 | MsG0680034835.01.T01:CDS | 45.0% | |
| TGCTGCTGTAATTGCGTTTG+TGG | + | Chr6:95221772-95221791 | MsG0680034835.01.T01:intron | 45.0% | |
| ! | ATAAGGAGGGCACATGTACT+CGG | - | Chr6:95224187-95224206 | None:intergenic | 45.0% |
| ! | CTGCATTTGGAGCTGAAAGA+TGG | + | Chr6:95223045-95223064 | MsG0680034835.01.T01:CDS | 45.0% |
| ! | GAGTATCATAGTGGAGCAAG+TGG | + | Chr6:95220383-95220402 | MsG0680034835.01.T01:CDS | 45.0% |
| ! | GCGGCAAAATGTTGTTGACT+CGG | + | Chr6:95221626-95221645 | MsG0680034835.01.T01:intron | 45.0% |
| !! | ATCTCTTCTGGAATGATGGG+TGG | + | Chr6:95222512-95222531 | MsG0680034835.01.T01:CDS | 45.0% |
| !! | ATGGGAAATTTTGGTGGGCA+TGG | + | Chr6:95221992-95222011 | MsG0680034835.01.T01:CDS | 45.0% |
| !! | CTGAAGGTGTTACTGGAATG+TGG | - | Chr6:95224495-95224514 | None:intergenic | 45.0% |
| !! | GTGAAACCTGAAGGTGTTAC+TGG | - | Chr6:95224502-95224521 | None:intergenic | 45.0% |
| !! | TTTTAGTTGCCCTAGTTCGC+CGG | + | Chr6:95224291-95224310 | MsG0680034835.01.T01:intron | 45.0% |
| !!! | TTTAAAAATTGTAATTTTAT+AGG | - | Chr6:95221440-95221459 | None:intergenic | 5.0% |
| AATGTGATCTGCCCCTCTTG+TGG | + | Chr6:95221235-95221254 | MsG0680034835.01.T01:CDS | 50.0% | |
| ACCAGCTTGCCTTTCTGACA+TGG | + | Chr6:95222090-95222109 | MsG0680034835.01.T01:CDS | 50.0% | |
| ACTGGTGGAAGCTGTGTGAT+TGG | - | Chr6:95221938-95221957 | None:intergenic | 50.0% | |
| AGCAACCAGAAGGAAGTCGA+TGG | - | Chr6:95222831-95222850 | None:intergenic | 50.0% | |
| AGTCCAAGCAACTGCAATCG+TGG | + | Chr6:95223309-95223328 | MsG0680034835.01.T01:intron | 50.0% | |
| ATCATGCTGCTCTTTCCCTC+AGG | - | Chr6:95223511-95223530 | None:intergenic | 50.0% | |
| ATCGGTGAGAGGATGATCCT+CGG | + | Chr6:95224000-95224019 | MsG0680034835.01.T01:intron | 50.0% | |
| ATTGGAGGACCACCACAAGA+GGG | - | Chr6:95221250-95221269 | None:intergenic | 50.0% | |
| CAACCACGATTGCAGTTGCT+TGG | - | Chr6:95223315-95223334 | None:intergenic | 50.0% | |
| CACTTCCACCATTGTTCCCT+AGG | - | Chr6:95224615-95224634 | None:intergenic | 50.0% | |
| CATGCCTAATGGCTACTCCA+AGG | + | Chr6:95222861-95222880 | MsG0680034835.01.T01:CDS | 50.0% | |
| CATGTTTCCGCTTGACACAG+TGG | + | Chr6:95224113-95224132 | MsG0680034835.01.T01:CDS | 50.0% | |
| CGTGTGAGCGTTCATGTACT+CGG | + | Chr6:95224208-95224227 | MsG0680034835.01.T01:intron | 50.0% | |
| CTAGAGGAGAGACTGTTTCC+AGG | - | Chr6:95224075-95224094 | None:intergenic | 50.0% | |
| GAAACAGTCTCTCCTCTAGC+AGG | + | Chr6:95224076-95224095 | MsG0680034835.01.T01:CDS | 50.0% | |
| GAACGCTCACACGTATAAGG+AGG | - | Chr6:95224201-95224220 | None:intergenic | 50.0% | |
| GCAACTCCATCTCTGTGCTT+AGG | + | Chr6:95223927-95223946 | MsG0680034835.01.T01:CDS | 50.0% | |
| GCACATAGCACAACACCACT+AGG | - | Chr6:95223667-95223686 | None:intergenic | 50.0% | |
| GCTTTGACCATGAGGAGACT+AGG | - | Chr6:95221044-95221063 | None:intergenic | 50.0% | |
| GTATACCTCCACCGAGATCA+CGG | - | Chr6:95223127-95223146 | None:intergenic | 50.0% | |
| GTGGTCACGAGTTCAAATCC+TGG | + | Chr6:95224132-95224151 | MsG0680034835.01.T01:CDS | 50.0% | |
| TAGGAAAGAGAGCCATCCAC+TGG | - | Chr6:95222460-95222479 | None:intergenic | 50.0% | |
| TATACCTCCACCGAGATCAC+GGG | - | Chr6:95223126-95223145 | None:intergenic | 50.0% | |
| TCAGCGATTCCATCACCTGA+GGG | + | Chr6:95223493-95223512 | MsG0680034835.01.T01:intron | 50.0% | |
| TCCATGTCAGAAAGGCAAGC+TGG | - | Chr6:95222094-95222113 | None:intergenic | 50.0% | |
| TCTGATTAGCAGTGTGACGG+TGG | - | Chr6:95220481-95220500 | None:intergenic | 50.0% | |
| TGTCAGAAAGGCAAGCTGGT+TGG | - | Chr6:95222090-95222109 | None:intergenic | 50.0% | |
| TTCAGCGATTCCATCACCTG+AGG | + | Chr6:95223492-95223511 | MsG0680034835.01.T01:intron | 50.0% | |
| ! | AGTCGATGGCACCGAAATTG+CGG | - | Chr6:95222817-95222836 | None:intergenic | 50.0% |
| ! | CTAGGGAACAATGGTGGAAG+TGG | + | Chr6:95224613-95224632 | MsG0680034835.01.T01:CDS | 50.0% |
| ! | GAAAGGCAAGCTGGTTGGTA+AGG | - | Chr6:95222085-95222104 | None:intergenic | 50.0% |
| ! | TTTGGTGGGCATGGAATGGT+TGG | + | Chr6:95222001-95222020 | MsG0680034835.01.T01:CDS | 50.0% |
| ACTGAGCTTGGTCAGCCTAG+TGG | + | Chr6:95223649-95223668 | MsG0680034835.01.T01:CDS | 55.0% | |
| AGCACAGAGATGGAGTTGCC+AGG | - | Chr6:95223926-95223945 | None:intergenic | 55.0% | |
| CTCGGTCTTACTCCTGCTAG+AGG | - | Chr6:95224091-95224110 | None:intergenic | 55.0% | |
| CTCGGTCTTTCTCCTGCTAG+AGG | - | Chr6:95224169-95224188 | None:intergenic | 55.0% | |
| CTCGTGACCACTGTGTCAAG+CGG | - | Chr6:95224123-95224142 | None:intergenic | 55.0% | |
| CTGCTCTTTCCCTCAGGTGA+TGG | - | Chr6:95223505-95223524 | None:intergenic | 55.0% | |
| GATTGGAGGACCACCACAAG+AGG | - | Chr6:95221251-95221270 | None:intergenic | 55.0% | |
| GCACAGAGATGGAGTTGCCA+GGG | - | Chr6:95223925-95223944 | None:intergenic | 55.0% | |
| GTTGGGTCCTAGTCTCCTCA+TGG | + | Chr6:95221034-95221053 | MsG0680034835.01.T01:intron | 55.0% | |
| GTTTCTGCCACCCGTGATCT+CGG | + | Chr6:95223113-95223132 | MsG0680034835.01.T01:CDS | 55.0% | |
| TGGAGGGAGAGGTAGCCAAA+TGG | - | Chr6:95223698-95223717 | None:intergenic | 55.0% | |
| TTGGAGGACCACCACAAGAG+GGG | - | Chr6:95221249-95221268 | None:intergenic | 55.0% | |
| ! | GGGAACAATGGTGGAAGTGG+AGG | + | Chr6:95224616-95224635 | MsG0680034835.01.T01:CDS | 55.0% |
| !! | GGAATGATGGGTGGTCCTAG+TGG | + | Chr6:95222521-95222540 | MsG0680034835.01.T01:CDS | 55.0% |
| ATTGCCGCCTTGTGACCCTG+AGG | + | Chr6:95224035-95224054 | MsG0680034835.01.T01:intron | 60.0% | |
| CACGTGACCTCAGGGTCACA+AGG | - | Chr6:95224045-95224064 | None:intergenic | 60.0% | |
| GGTGGGCATGGAATGGTTGG+AGG | + | Chr6:95222004-95222023 | MsG0680034835.01.T01:CDS | 60.0% | |
| GTGACCTCAGGGTCACAAGG+CGG | - | Chr6:95224042-95224061 | None:intergenic | 60.0% | |
| GTGATCTGCCCCTCTTGTGG+TGG | + | Chr6:95221238-95221257 | MsG0680034835.01.T01:CDS | 60.0% | |
| !! | CGGTGCCATCGACTTCCTTC+TGG | + | Chr6:95222823-95222842 | MsG0680034835.01.T01:CDS | 60.0% |
| ACCTCCACCGAGATCACGGG+TGG | - | Chr6:95223123-95223142 | None:intergenic | 65.0% | |
| AGTGGAGCAAGTGGGTCCCC+TGG | + | Chr6:95220392-95220411 | MsG0680034835.01.T01:CDS | 65.0% | |
| TCTGCCACCCGTGATCTCGG+TGG | + | Chr6:95223116-95223135 | MsG0680034835.01.T01:CDS | 65.0% | |
| GCCACCCGTGATCTCGGTGG+AGG | + | Chr6:95223119-95223138 | MsG0680034835.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 95220380 | 95224783 | 95220380 | ID=MsG0680034835.01;Name=MsG0680034835.01 |
| Chr6 | mRNA | 95220380 | 95224783 | 95220380 | ID=MsG0680034835.01.T01;Parent=MsG0680034835.01;Name=MsG0680034835.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|12|0|748 |
| Chr6 | exon | 95220380 | 95220516 | 95220380 | ID=MsG0680034835.01.T01:exon:6278;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95220653 | 95220770 | 95220653 | ID=MsG0680034835.01.T01:exon:6279;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95221145 | 95221333 | 95221145 | ID=MsG0680034835.01.T01:exon:6280;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95221893 | 95222211 | 95221893 | ID=MsG0680034835.01.T01:exon:6281;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95222298 | 95222362 | 95222298 | ID=MsG0680034835.01.T01:exon:6282;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95222455 | 95222556 | 95222455 | ID=MsG0680034835.01.T01:exon:6283;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95222673 | 95222882 | 95222673 | ID=MsG0680034835.01.T01:exon:6284;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95222966 | 95223140 | 95222966 | ID=MsG0680034835.01.T01:exon:6285;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95223497 | 95223762 | 95223497 | ID=MsG0680034835.01.T01:exon:6286;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95223860 | 95223949 | 95223860 | ID=MsG0680034835.01.T01:exon:6287;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95224057 | 95224210 | 95224057 | ID=MsG0680034835.01.T01:exon:6288;Parent=MsG0680034835.01.T01 |
| Chr6 | exon | 95224362 | 95224783 | 95224362 | ID=MsG0680034835.01.T01:exon:6289;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95220380 | 95220516 | 95220380 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95220653 | 95220770 | 95220653 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95221145 | 95221333 | 95221145 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95221893 | 95222211 | 95221893 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95222298 | 95222362 | 95222298 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95222455 | 95222556 | 95222455 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95222673 | 95222882 | 95222673 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95222966 | 95223140 | 95222966 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95223497 | 95223762 | 95223497 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95223860 | 95223949 | 95223860 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95224057 | 95224210 | 95224057 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Chr6 | CDS | 95224362 | 95224783 | 95224362 | ID=MsG0680034835.01.T01:cds;Parent=MsG0680034835.01.T01 |
| Gene Sequence |
| Protein sequence |
