Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021201.01.T01 | XP_024636394.1 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021201.01.T01 | Q9XII1 | 47.799 | 318 | 121 | 8 | 2 | 287 | 3 | 307 | 7.09E-82 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021201.01.T01 | A0A072UX16 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0.0 | 576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048065.01 | MsG0480021201.01 | 0.810931 | 9.016561e-51 | 5.507625e-48 |
| MsG0080048727.01 | MsG0480021201.01 | 0.806365 | 8.524326e-50 | 4.617981e-47 |
| MsG0080048748.01 | MsG0480021201.01 | 0.857432 | 1.638906e-62 | 4.043967e-59 |
| MsG0080048826.01 | MsG0480021201.01 | 0.821384 | 4.155511e-53 | 3.375557e-50 |
| MsG0080048849.01 | MsG0480021201.01 | 0.886476 | 3.308820e-72 | 2.367095e-68 |
| MsG0080048865.01 | MsG0480021201.01 | 0.817387 | 3.385254e-52 | 2.461973e-49 |
| MsG0080048878.01 | MsG0480021201.01 | 0.849322 | 3.483045e-60 | 6.578896e-57 |
| MsG0080048938.01 | MsG0480021201.01 | 0.810171 | 1.316138e-50 | 7.877987e-48 |
| MsG0080049068.01 | MsG0480021201.01 | 0.826392 | 2.782819e-54 | 2.606411e-51 |
| MsG0080049069.01 | MsG0480021201.01 | 0.896930 | 2.298312e-76 | 2.539092e-72 |
| MsG0080049147.01 | MsG0480021201.01 | 0.801370 | 9.298121e-49 | 4.432920e-46 |
| MsG0180000026.01 | MsG0480021201.01 | 0.848444 | 6.106039e-60 | 1.120828e-56 |
| MsG0180000113.01 | MsG0480021201.01 | 0.821304 | 4.334428e-53 | 3.513205e-50 |
| MsG0180000544.01 | MsG0480021201.01 | -0.808194 | 3.492011e-50 | 1.983912e-47 |
| MsG0180000834.01 | MsG0480021201.01 | 0.802997 | 4.301312e-49 | 2.137079e-46 |
| MsG0180001248.01 | MsG0480021201.01 | -0.856841 | 2.448433e-62 | 5.921087e-59 |
| MsG0180001548.01 | MsG0480021201.01 | 0.813881 | 2.045371e-51 | 1.351860e-48 |
| MsG0180001610.01 | MsG0480021201.01 | 0.816007 | 6.902877e-52 | 4.834011e-49 |
| MsG0180001704.01 | MsG0480021201.01 | 0.864267 | 1.374921e-64 | 4.291061e-61 |
| MsG0180001722.01 | MsG0480021201.01 | 0.841553 | 4.432216e-58 | 6.536001e-55 |
| MsG0180002184.01 | MsG0480021201.01 | 0.814492 | 1.498581e-51 | 1.007069e-48 |
| MsG0180002700.01 | MsG0480021201.01 | 0.846891 | 1.633550e-59 | 2.852808e-56 |
| MsG0180003189.01 | MsG0480021201.01 | 0.807093 | 5.981213e-50 | 3.301615e-47 |
| MsG0180003246.01 | MsG0480021201.01 | -0.840340 | 9.224135e-58 | 1.309810e-54 |
| MsG0180003353.01 | MsG0480021201.01 | 0.803594 | 3.236398e-49 | 1.632940e-46 |
| MsG0180003697.01 | MsG0480021201.01 | 0.824950 | 6.115075e-54 | 5.497083e-51 |
| MsG0180003767.01 | MsG0480021201.01 | -0.844084 | 9.408674e-59 | 1.502214e-55 |
| MsG0180003821.01 | MsG0480021201.01 | 0.816508 | 5.332726e-52 | 3.785807e-49 |
| MsG0180004025.01 | MsG0480021201.01 | 0.853087 | 3.013004e-61 | 6.433518e-58 |
| MsG0180004448.01 | MsG0480021201.01 | 0.809147 | 2.184225e-50 | 1.272549e-47 |
| MsG0180004466.01 | MsG0480021201.01 | 0.804894 | 1.735264e-49 | 9.053924e-47 |
| MsG0180004750.01 | MsG0480021201.01 | 0.849945 | 2.333333e-60 | 4.497577e-57 |
| MsG0180004759.01 | MsG0480021201.01 | -0.805959 | 1.037520e-49 | 5.563127e-47 |
| MsG0180005005.01 | MsG0480021201.01 | 0.805676 | 1.189976e-49 | 6.334281e-47 |
| MsG0180005964.01 | MsG0480021201.01 | 0.812590 | 3.926720e-51 | 2.506742e-48 |
| MsG0180006031.01 | MsG0480021201.01 | 0.812837 | 3.467388e-51 | 2.227741e-48 |
| MsG0180006034.01 | MsG0480021201.01 | -0.815061 | 1.120960e-51 | 7.648924e-49 |
| MsG0180006055.01 | MsG0480021201.01 | 0.825598 | 4.296030e-54 | 3.933705e-51 |
| MsG0180006096.01 | MsG0480021201.01 | 0.812063 | 5.118961e-51 | 3.221749e-48 |
| MsG0180006267.01 | MsG0480021201.01 | -0.818944 | 1.504489e-52 | 1.142155e-49 |
| MsG0280006306.01 | MsG0480021201.01 | -0.841204 | 5.475867e-58 | 7.986982e-55 |
| MsG0280006370.01 | MsG0480021201.01 | 0.807518 | 4.859792e-50 | 2.712543e-47 |
| MsG0280006418.01 | MsG0480021201.01 | -0.828939 | 6.800874e-55 | 6.858617e-52 |
| MsG0280010564.01 | MsG0480021201.01 | 0.812371 | 4.384336e-51 | 2.782680e-48 |
| MsG0280010604.01 | MsG0480021201.01 | -0.847364 | 1.211893e-59 | 2.148891e-56 |
| MsG0280011059.01 | MsG0480021201.01 | -0.854462 | 1.211202e-61 | 2.707022e-58 |
| MsG0280011180.01 | MsG0480021201.01 | 0.805947 | 1.043538e-49 | 5.593656e-47 |
| MsG0280011255.01 | MsG0480021201.01 | 0.826741 | 2.297424e-54 | 2.173187e-51 |
| MsG0380012005.01 | MsG0480021201.01 | 0.850781 | 1.360320e-60 | 2.694621e-57 |
| MsG0380012567.01 | MsG0480021201.01 | 0.816105 | 6.562836e-52 | 4.608278e-49 |
| MsG0380012868.01 | MsG0480021201.01 | 0.856412 | 3.274311e-62 | 7.808793e-59 |
| MsG0380013295.01 | MsG0480021201.01 | -0.825539 | 4.436844e-54 | 4.055596e-51 |
| MsG0380013467.01 | MsG0480021201.01 | 0.838699 | 2.462636e-57 | 3.324895e-54 |
| MsG0380014240.01 | MsG0480021201.01 | 0.810467 | 1.136204e-50 | 6.854178e-48 |
| MsG0480018584.01 | MsG0480021201.01 | 0.812411 | 4.296527e-51 | 2.730005e-48 |
| MsG0480018850.01 | MsG0480021201.01 | 0.836376 | 9.701551e-57 | 1.220391e-53 |
| MsG0480018911.01 | MsG0480021201.01 | 0.843793 | 1.126125e-58 | 1.781582e-55 |
| MsG0480019007.01 | MsG0480021201.01 | 0.804411 | 2.187942e-49 | 1.127298e-46 |
| MsG0480019126.01 | MsG0480021201.01 | 0.814667 | 1.371201e-51 | 9.257284e-49 |
| MsG0480019313.01 | MsG0480021201.01 | 0.803671 | 3.118316e-49 | 1.576397e-46 |
| MsG0480019384.01 | MsG0480021201.01 | 0.845329 | 4.345631e-59 | 7.217266e-56 |
| MsG0480019689.01 | MsG0480021201.01 | -0.851887 | 6.623347e-61 | 1.359767e-57 |
| MsG0480020024.01 | MsG0480021201.01 | 0.820803 | 5.653903e-53 | 4.519407e-50 |
| MsG0480020025.01 | MsG0480021201.01 | 0.838086 | 3.544187e-57 | 4.695941e-54 |
| MsG0480020502.01 | MsG0480021201.01 | 0.838527 | 2.727031e-57 | 3.662545e-54 |
| MsG0480020935.01 | MsG0480021201.01 | -0.808876 | 2.496584e-50 | 1.443907e-47 |
| MsG0480021201.01 | MsG0480021248.01 | 0.845499 | 3.910403e-59 | 6.529160e-56 |
| MsG0480021201.01 | MsG0480021561.01 | 0.801809 | 7.556703e-49 | 3.642867e-46 |
| MsG0480021201.01 | MsG0480021776.01 | -0.881376 | 2.528092e-70 | 1.477444e-66 |
| MsG0480021201.01 | MsG0480021836.01 | -0.821544 | 3.816730e-53 | 3.114373e-50 |
| MsG0480021201.01 | MsG0480021869.01 | 0.802788 | 4.751085e-49 | 2.348244e-46 |
| MsG0480021201.01 | MsG0480022162.01 | 0.832820 | 7.600616e-56 | 8.592342e-53 |
| MsG0480021201.01 | MsG0480022340.01 | -0.822155 | 2.756180e-53 | 2.288233e-50 |
| MsG0480021201.01 | MsG0480022872.01 | -0.849845 | 2.489271e-60 | 4.782005e-57 |
| MsG0480021201.01 | MsG0480023073.01 | 0.850340 | 1.809413e-60 | 3.532728e-57 |
| MsG0480021201.01 | MsG0480023162.01 | 0.828706 | 7.744458e-55 | 7.757758e-52 |
| MsG0480021201.01 | MsG0480023190.01 | 0.805444 | 1.330936e-49 | 7.042406e-47 |
| MsG0480021201.01 | MsG0480023261.01 | 0.805284 | 1.437728e-49 | 7.576035e-47 |
| MsG0480021201.01 | MsG0480023348.01 | -0.811177 | 7.975517e-51 | 4.902972e-48 |
| MsG0480021201.01 | MsG0480023652.01 | 0.827014 | 1.976806e-54 | 1.884860e-51 |
| MsG0480021201.01 | MsG0480023723.01 | 0.834684 | 2.600122e-56 | 3.107988e-53 |
| MsG0480021201.01 | MsG0480023877.01 | 0.824599 | 7.396216e-54 | 6.582564e-51 |
| MsG0480021201.01 | MsG0580024285.01 | 0.803241 | 3.828758e-49 | 1.914313e-46 |
| MsG0480021201.01 | MsG0580025055.01 | 0.834052 | 3.744487e-56 | 4.392458e-53 |
| MsG0480021201.01 | MsG0580025132.01 | 0.812269 | 4.614932e-51 | 2.921100e-48 |
| MsG0480021201.01 | MsG0580025182.01 | -0.836670 | 8.168083e-57 | 1.036462e-53 |
| MsG0480021201.01 | MsG0580025369.01 | -0.815478 | 9.055988e-52 | 6.251019e-49 |
| MsG0480021201.01 | MsG0580025467.01 | 0.843970 | 1.009639e-58 | 1.606267e-55 |
| MsG0480021201.01 | MsG0580025561.01 | -0.802152 | 6.424974e-49 | 3.124425e-46 |
| MsG0480021201.01 | MsG0580025627.01 | 0.842845 | 2.015753e-58 | 3.095365e-55 |
| MsG0480021201.01 | MsG0580025827.01 | 0.829863 | 4.057609e-55 | 4.205337e-52 |
| MsG0480021201.01 | MsG0580026159.01 | -0.835845 | 1.323722e-56 | 1.638538e-53 |
| MsG0480021201.01 | MsG0580026498.01 | 0.806745 | 7.085194e-50 | 3.875966e-47 |
| MsG0480021201.01 | MsG0580027064.01 | -0.852494 | 4.450755e-61 | 9.316608e-58 |
| MsG0480021201.01 | MsG0580027103.01 | 0.811693 | 6.161557e-51 | 3.839596e-48 |
| MsG0480021201.01 | MsG0580027394.01 | 0.800399 | 1.467814e-48 | 6.827821e-46 |
| MsG0480021201.01 | MsG0580028065.01 | -0.807351 | 5.274088e-50 | 2.930941e-47 |
| MsG0480021201.01 | MsG0580028419.01 | 0.815486 | 9.018773e-52 | 6.226684e-49 |
| MsG0480021201.01 | MsG0580028428.01 | 0.822943 | 1.807086e-53 | 1.534415e-50 |
| MsG0480021201.01 | MsG0580028551.01 | 0.807188 | 5.709491e-50 | 3.159509e-47 |
| MsG0480021201.01 | MsG0580028630.01 | 0.814614 | 1.408817e-51 | 9.498010e-49 |
| MsG0480021201.01 | MsG0580029039.01 | 0.803147 | 4.004720e-49 | 1.997445e-46 |
| MsG0480021201.01 | MsG0580029511.01 | 0.811211 | 7.843679e-51 | 4.826288e-48 |
| MsG0480021201.01 | MsG0580029549.01 | 0.802075 | 6.663038e-49 | 3.233844e-46 |
| MsG0480021201.01 | MsG0580029734.01 | 0.829248 | 5.723010e-55 | 5.825535e-52 |
| MsG0480021201.01 | MsG0580029879.01 | 0.802949 | 4.400407e-49 | 2.183720e-46 |
| MsG0480021201.01 | MsG0580029914.01 | 0.814002 | 1.922846e-51 | 1.275055e-48 |
| MsG0480021201.01 | MsG0680030356.01 | -0.806215 | 9.166257e-50 | 4.947212e-47 |
| MsG0480021201.01 | MsG0680030555.01 | 0.819637 | 1.045999e-52 | 8.094027e-50 |
| MsG0480021201.01 | MsG0680030599.01 | 0.810297 | 1.236383e-50 | 7.424758e-48 |
| MsG0480021201.01 | MsG0680030907.01 | 0.810784 | 9.705144e-51 | 5.904526e-48 |
| MsG0480021201.01 | MsG0680030992.01 | 0.814570 | 1.440557e-51 | 9.700578e-49 |
| MsG0480021201.01 | MsG0680031826.01 | 0.829549 | 4.837891e-55 | 4.967222e-52 |
| MsG0480021201.01 | MsG0680032378.01 | 0.811602 | 6.450636e-51 | 4.010025e-48 |
| MsG0480021201.01 | MsG0680032473.01 | -0.842186 | 3.015052e-58 | 4.535069e-55 |
| MsG0480021201.01 | MsG0680032827.01 | 0.860374 | 2.159600e-63 | 5.890435e-60 |
| MsG0480021201.01 | MsG0680033377.01 | 0.816017 | 6.869775e-52 | 4.812198e-49 |
| MsG0480021201.01 | MsG0680035311.01 | -0.830655 | 2.598811e-55 | 2.755529e-52 |
| MsG0480021201.01 | MsG0680035859.01 | 0.812008 | 5.262404e-51 | 3.307206e-48 |
| MsG0480021201.01 | MsG0780035960.01 | 0.845073 | 5.098734e-59 | 8.398289e-56 |
| MsG0480021201.01 | MsG0780035965.01 | 0.820630 | 6.195634e-53 | 4.927991e-50 |
| MsG0480021201.01 | MsG0780036069.01 | 0.803750 | 3.002772e-49 | 1.521137e-46 |
| MsG0480021201.01 | MsG0780036347.01 | -0.829354 | 5.396192e-55 | 5.509907e-52 |
| MsG0480021201.01 | MsG0780036666.01 | 0.821776 | 3.372146e-53 | 2.769770e-50 |
| MsG0480021201.01 | MsG0780036792.01 | 0.834759 | 2.489310e-56 | 2.982302e-53 |
| MsG0480021201.01 | MsG0780036803.01 | 0.830548 | 2.760214e-55 | 2.917297e-52 |
| MsG0480021201.01 | MsG0780037506.01 | -0.836728 | 7.894977e-57 | 1.003639e-53 |
| MsG0480021201.01 | MsG0780038056.01 | 0.855743 | 5.141237e-62 | 1.199044e-58 |
| MsG0480021201.01 | MsG0780038309.01 | -0.828369 | 9.342664e-55 | 9.267436e-52 |
| MsG0480021201.01 | MsG0780038348.01 | 0.811524 | 6.707715e-51 | 4.161584e-48 |
| MsG0480021201.01 | MsG0780038473.01 | -0.832700 | 8.139229e-56 | 9.168757e-53 |
| MsG0480021201.01 | MsG0780039161.01 | 0.813087 | 3.056557e-51 | 1.976975e-48 |
| MsG0480021201.01 | MsG0780039867.01 | -0.801651 | 8.144057e-49 | 3.910117e-46 |
| MsG0480021201.01 | MsG0780040295.01 | -0.863979 | 1.691060e-64 | 5.224114e-61 |
| MsG0480021201.01 | MsG0780040566.01 | -0.836337 | 9.925935e-57 | 1.247230e-53 |
| MsG0480021201.01 | MsG0780040763.01 | 0.844632 | 6.705188e-59 | 1.089120e-55 |
| MsG0480021201.01 | MsG0780040939.01 | -0.802790 | 4.745399e-49 | 2.345572e-46 |
| MsG0480021201.01 | MsG0780041117.01 | -0.822321 | 2.521936e-53 | 2.103893e-50 |
| MsG0480021201.01 | MsG0780041470.01 | -0.823617 | 1.257907e-53 | 1.088608e-50 |
| MsG0480021201.01 | MsG0780041569.01 | -0.820201 | 7.772393e-53 | 6.109775e-50 |
| MsG0480021201.01 | MsG0780041747.01 | 0.859644 | 3.586168e-63 | 9.538695e-60 |
| MsG0480021201.01 | MsG0880041852.01 | 0.821602 | 3.700411e-53 | 3.024229e-50 |
| MsG0480021201.01 | MsG0880042022.01 | 0.843199 | 1.623175e-58 | 2.520234e-55 |
| MsG0480021201.01 | MsG0880042026.01 | 0.805177 | 1.513846e-49 | 7.955602e-47 |
| MsG0480021201.01 | MsG0880042044.01 | 0.806763 | 7.024682e-50 | 3.844614e-47 |
| MsG0480021201.01 | MsG0880042086.01 | 0.821017 | 5.049280e-53 | 4.060445e-50 |
| MsG0480021201.01 | MsG0880042987.01 | -0.838229 | 3.255399e-57 | 4.332100e-54 |
| MsG0480021201.01 | MsG0880043024.01 | 0.852554 | 4.277583e-61 | 8.970798e-58 |
| MsG0480021201.01 | MsG0880043298.01 | 0.838294 | 3.131959e-57 | 4.176073e-54 |
| MsG0480021201.01 | MsG0880043650.01 | 0.814160 | 1.775076e-51 | 1.182077e-48 |
| MsG0480021201.01 | MsG0880043829.01 | 0.803656 | 3.141435e-49 | 1.587477e-46 |
| MsG0480021201.01 | MsG0880043905.01 | 0.839018 | 2.036722e-57 | 2.776519e-54 |
| MsG0480021201.01 | MsG0880043955.01 | 0.819881 | 9.202091e-53 | 7.169378e-50 |
| MsG0480021201.01 | MsG0880044611.01 | -0.810541 | 1.095018e-50 | 6.618495e-48 |
| MsG0480021201.01 | MsG0880044901.01 | -0.801697 | 7.966742e-49 | 3.829469e-46 |
| MsG0480021201.01 | MsG0880045010.01 | -0.804158 | 2.470335e-49 | 1.264591e-46 |
| MsG0480021201.01 | MsG0880045285.01 | 0.834672 | 2.617169e-56 | 3.127492e-53 |
| MsG0480021201.01 | MsG0880045548.01 | -0.836721 | 7.924219e-57 | 1.007159e-53 |
| MsG0480021201.01 | MsG0880045605.01 | -0.828743 | 7.587752e-55 | 7.608305e-52 |
| MsG0480021201.01 | MsG0880045722.01 | 0.827368 | 1.625967e-54 | 1.566771e-51 |
| MsG0480021201.01 | MsG0880045992.01 | 0.834017 | 3.821843e-56 | 4.478363e-53 |
| MsG0480021201.01 | MsG0880046334.01 | -0.805066 | 1.596935e-49 | 8.368485e-47 |
| MsG0480021201.01 | MsG0880046536.01 | 0.851725 | 7.358597e-61 | 1.503237e-57 |
| MsG0480021201.01 | MsG0880046569.01 | -0.813825 | 2.104265e-51 | 1.388636e-48 |
| MsG0480021201.01 | MsG0880046699.01 | 0.807764 | 4.309849e-50 | 2.420931e-47 |
| MsG0480021201.01 | MsG0880046765.01 | 0.827389 | 1.607430e-54 | 1.549814e-51 |
| MsG0480021201.01 | MsG0880046930.01 | 0.823453 | 1.373939e-53 | 1.183454e-50 |
| MsG0480021201.01 | MsG0880046963.01 | -0.803860 | 2.849831e-49 | 1.447747e-46 |
| MsG0480021201.01 | MsG0880047481.01 | -0.818803 | 1.619719e-52 | 1.224645e-49 |
| MsG0380015533.01 | MsG0480021201.01 | 0.837824 | 4.139277e-57 | 5.441413e-54 |
| MsG0380015703.01 | MsG0480021201.01 | 0.838402 | 2.938543e-57 | 3.931510e-54 |
| MsG0380015784.01 | MsG0480021201.01 | 0.826616 | 2.460762e-54 | 2.319417e-51 |
| MsG0380015847.01 | MsG0480021201.01 | -0.819889 | 9.163070e-53 | 7.140564e-50 |
| MsG0380016057.01 | MsG0480021201.01 | 0.822577 | 2.198698e-53 | 1.847820e-50 |
| MsG0380016191.01 | MsG0480021201.01 | -0.871040 | 9.246690e-67 | 3.676221e-63 |
| MsG0380016347.01 | MsG0480021201.01 | -0.861286 | 1.141523e-63 | 3.213717e-60 |
| MsG0380016540.01 | MsG0480021201.01 | 0.823565 | 1.293399e-53 | 1.117659e-50 |
| MsG0380016547.01 | MsG0480021201.01 | -0.830549 | 2.758907e-55 | 2.915961e-52 |
| MsG0380016619.01 | MsG0480021201.01 | -0.810838 | 9.443929e-51 | 5.754076e-48 |
| MsG0380016820.01 | MsG0480021201.01 | 0.841859 | 3.680251e-58 | 5.479168e-55 |
| MsG0380017023.01 | MsG0480021201.01 | 0.802112 | 6.548721e-49 | 3.181270e-46 |
| MsG0380017085.01 | MsG0480021201.01 | 0.842069 | 3.238079e-58 | 4.852860e-55 |
| MsG0380017202.01 | MsG0480021201.01 | 0.826325 | 2.886753e-54 | 2.698503e-51 |
| MsG0380017293.01 | MsG0480021201.01 | 0.829281 | 5.621087e-55 | 5.727619e-52 |
| MsG0380017338.01 | MsG0480021201.01 | 0.817217 | 3.697571e-52 | 2.676529e-49 |
| MsG0380017437.01 | MsG0480021201.01 | -0.817061 | 4.007964e-52 | 2.888934e-49 |
| MsG0380017663.01 | MsG0480021201.01 | 0.800841 | 1.192817e-48 | 5.611243e-46 |
| MsG0380017878.01 | MsG0480021201.01 | -0.820885 | 5.414380e-53 | 4.337810e-50 |
| MsG0380017891.01 | MsG0480021201.01 | -0.809968 | 1.455488e-50 | 8.666277e-48 |
| MsG0380017931.01 | MsG0480021201.01 | 0.825628 | 4.226823e-54 | 3.873600e-51 |
| MsG0380018037.01 | MsG0480021201.01 | 0.810420 | 1.162872e-50 | 7.005999e-48 |
| MsG0480018091.01 | MsG0480021201.01 | -0.831952 | 1.246837e-55 | 1.373899e-52 |
| MsG0480018426.01 | MsG0480021201.01 | 0.860441 | 2.061776e-63 | 5.636392e-60 |
| MsG0280006996.01 | MsG0480021201.01 | 0.809695 | 1.666490e-50 | 9.851571e-48 |
| MsG0280007193.01 | MsG0480021201.01 | -0.858702 | 6.873741e-63 | 1.769966e-59 |
| MsG0280007207.01 | MsG0480021201.01 | -0.804157 | 2.471826e-49 | 1.265318e-46 |
| MsG0280007211.01 | MsG0480021201.01 | -0.809794 | 1.586388e-50 | 9.402940e-48 |
| MsG0280007575.01 | MsG0480021201.01 | 0.810430 | 1.157390e-50 | 6.974865e-48 |
| MsG0280007647.01 | MsG0480021201.01 | 0.902342 | 1.069621e-78 | 1.507625e-74 |
| MsG0280008304.01 | MsG0480021201.01 | -0.805790 | 1.125819e-49 | 6.010558e-47 |
| MsG0280008660.01 | MsG0480021201.01 | -0.844159 | 8.986488e-59 | 1.438160e-55 |
| MsG0280008928.01 | MsG0480021201.01 | 0.892170 | 2.030876e-74 | 1.835037e-70 |
| MsG0280008929.01 | MsG0480021201.01 | 0.852700 | 3.886109e-61 | 8.189094e-58 |
| MsG0280009256.01 | MsG0480021201.01 | 0.831542 | 1.573956e-55 | 1.713439e-52 |
| MsG0280009699.01 | MsG0480021201.01 | 0.802426 | 5.640833e-49 | 2.762480e-46 |
| MsG0280010288.01 | MsG0480021201.01 | 0.838257 | 3.202331e-57 | 4.265079e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021201.01.T01 | MTR_4g068880 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0.0 | 576 |
| MsG0480021201.01.T01 | MTR_4g068880 | 96.516 | 287 | 10 | 0 | 1 | 287 | 34 | 320 | 0.0 | 575 |
| MsG0480021201.01.T01 | MTR_0026s0200 | 94.714 | 227 | 12 | 0 | 61 | 287 | 552 | 778 | 7.10e-154 | 449 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021201.01.T01 | AT2G16070 | 47.799 | 318 | 121 | 8 | 2 | 287 | 3 | 307 | 7.23e-83 | 252 |
| MsG0480021201.01.T01 | AT2G16070 | 48.899 | 227 | 99 | 6 | 65 | 287 | 11 | 224 | 4.23e-61 | 193 |
| MsG0480021201.01.T01 | AT2G16070 | 48.899 | 227 | 99 | 6 | 65 | 287 | 11 | 224 | 4.23e-61 | 193 |
Find 74 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTACTGGTCAATATTT+AGG | 0.178796 | 4:-55087228 | MsG0480021201.01.T01:three_prime_UTR |
| CAACGAACCTTCTGCAAATT+AGG | 0.192387 | 4:+55087596 | None:intergenic |
| GACTCAGCTTTCTTCCTTGC+AGG | 0.213229 | 4:-55090446 | MsG0480021201.01.T01:intron |
| GAGATCTACCACTGAAAATA+AGG | 0.238835 | 4:-55087531 | MsG0480021201.01.T01:CDS |
| CCACATCCATAGTTTATATC+AGG | 0.316941 | 4:+55087401 | None:intergenic |
| CTAAATAAGTCTTTGTTTGT+TGG | 0.323315 | 4:+55090678 | None:intergenic |
| GTTGCAGCAACAGCTGAAAA+TGG | 0.342115 | 4:+55087425 | None:intergenic |
| CCTCGTCTTCATCGTCTTCA+AGG | 0.349354 | 4:+55090518 | None:intergenic |
| GGAGTATAAAGGAAAAGATT+TGG | 0.355923 | 4:-55087957 | MsG0480021201.01.T01:CDS |
| AAAATTAAAACATAAAATAA+GGG | 0.363954 | 4:+55087328 | None:intergenic |
| TTGCGATGCACTCGAAGCTT+TGG | 0.364488 | 4:-55090470 | MsG0480021201.01.T01:CDS |
| GTGTCCACCTGGTAGAGTTT+TGG | 0.371016 | 4:-55087498 | MsG0480021201.01.T01:CDS |
| GCAACACCTGATATAAACTA+TGG | 0.384435 | 4:-55087407 | MsG0480021201.01.T01:CDS |
| ATATTGAGTATGTCAGGATT+TGG | 0.388003 | 4:-55087620 | MsG0480021201.01.T01:CDS |
| TATTTGCATTGTCTTATACT+TGG | 0.395247 | 4:-55090717 | None:intergenic |
| AATAAGCTCAAGGAGTATAA+AGG | 0.395809 | 4:-55087968 | MsG0480021201.01.T01:CDS |
| TATGGAGGGCGGGTTGGATA+AGG | 0.395815 | 4:+55087866 | None:intergenic |
| GGTTGGCTCCACTGTTTCAC+TGG | 0.400114 | 4:+55087907 | None:intergenic |
| TGAGTGATTGGCATGATTAC+TGG | 0.401255 | 4:-55087240 | MsG0480021201.01.T01:three_prime_UTR |
| CACTGTTTCACTGGCAAAAG+TGG | 0.402405 | 4:+55087916 | None:intergenic |
| CAATGGAAGAAGAAGGAATA+GGG | 0.402625 | 4:-55090621 | MsG0480021201.01.T01:CDS |
| TATTGTAGTAGCTGAGTGAT+TGG | 0.403929 | 4:-55087252 | MsG0480021201.01.T01:three_prime_UTR |
| TCGTCTTCAAGGAGACCATT+AGG | 0.408182 | 4:+55090529 | None:intergenic |
| AAACCAACTTCTTCTCCTAA+TGG | 0.424275 | 4:-55090544 | MsG0480021201.01.T01:CDS |
| TTGTCAAGAGACATGGAATA+TGG | 0.435035 | 4:+55087848 | None:intergenic |
| ACAATGGAAGAAGAAGGAAT+AGG | 0.452375 | 4:-55090622 | MsG0480021201.01.T01:CDS |
| AGCAAAATCATGTTGAAGAC+GGG | 0.457681 | 4:-55087724 | MsG0480021201.01.T01:CDS |
| AAAGCAGTGCTCACAGTTGT+TGG | 0.459690 | 4:-55087653 | MsG0480021201.01.T01:CDS |
| CACAGACTAGAAAATGAGAA+TGG | 0.463269 | 4:-55087554 | MsG0480021201.01.T01:CDS |
| AGGAGGAAGTAGTAGATCAT+TGG | 0.467708 | 4:+55087886 | None:intergenic |
| ATGGAATATGGAGGGCGGGT+TGG | 0.479831 | 4:+55087860 | None:intergenic |
| ATCCCTTCTGTCAATAAGTC+CGG | 0.488206 | 4:-55087809 | MsG0480021201.01.T01:CDS |
| GTCAATAAGTCCGGTCGCAA+TGG | 0.494855 | 4:-55087800 | MsG0480021201.01.T01:CDS |
| GTATCAATATTGAGTATGTC+AGG | 0.496740 | 4:-55087626 | MsG0480021201.01.T01:CDS |
| TAGCGAGAGCCACAGAACTT+AGG | 0.501152 | 4:-55090591 | MsG0480021201.01.T01:CDS |
| GGAGGGCGGGTTGGATAAGG+AGG | 0.511572 | 4:+55087869 | None:intergenic |
| AAGACGAGGATGCTACTGAT+AGG | 0.511739 | 4:-55090504 | MsG0480021201.01.T01:CDS |
| CACACTTGATAATGTGATTG+AGG | 0.511821 | 4:-55087771 | MsG0480021201.01.T01:CDS |
| CTAATTTGCAGAAGGTTCGT+TGG | 0.524180 | 4:-55087595 | MsG0480021201.01.T01:CDS |
| ACAGACTAGAAAATGAGAAT+GGG | 0.537258 | 4:-55087553 | MsG0480021201.01.T01:CDS |
| GATCTTCAACCTAAGTTCTG+TGG | 0.541601 | 4:+55090582 | None:intergenic |
| AGACCATTAGGAGAAGAAGT+TGG | 0.548035 | 4:+55090541 | None:intergenic |
| AGATCTACCACTGAAAATAA+GGG | 0.549200 | 4:-55087530 | MsG0480021201.01.T01:CDS |
| CGACCGGACTTATTGACAGA+AGG | 0.550670 | 4:+55087806 | None:intergenic |
| CTCGATGTCTCGTGAAAGAG+AGG | 0.553753 | 4:-55087457 | MsG0480021201.01.T01:CDS |
| ACCACTGAAAATAAGGGTGA+TGG | 0.554032 | 4:-55087524 | MsG0480021201.01.T01:CDS |
| AGACATGGAATATGGAGGGC+GGG | 0.557062 | 4:+55087856 | None:intergenic |
| GGTGATGGACAGTGTCCACC+TGG | 0.562228 | 4:-55087509 | MsG0480021201.01.T01:CDS |
| TCCAGCACCAAAACTCTACC+AGG | 0.564759 | 4:+55087491 | None:intergenic |
| ATTTGGTCCTAATTTGCAGA+AGG | 0.566190 | 4:-55087603 | MsG0480021201.01.T01:CDS |
| ATATACAATGAGGAGAACTA+AGG | 0.569170 | 4:+55087368 | None:intergenic |
| GAGCAAAATCATGTTGAAGA+CGG | 0.571685 | 4:-55087725 | MsG0480021201.01.T01:CDS |
| CCTGATATAAACTATGGATG+TGG | 0.573675 | 4:-55087401 | MsG0480021201.01.T01:CDS |
| TGTGATTAATCCATTGCGAC+CGG | 0.579636 | 4:+55087790 | None:intergenic |
| AAATTAAAACATAAAATAAG+GGG | 0.580436 | 4:+55087329 | None:intergenic |
| AATGCTAATTAATAAGCTCA+AGG | 0.585821 | 4:-55087978 | MsG0480021201.01.T01:CDS |
| TCAAGAGACATGGAATATGG+AGG | 0.598159 | 4:+55087851 | None:intergenic |
| GACCGGACTTATTGACAGAA+GGG | 0.606790 | 4:+55087807 | None:intergenic |
| ATTTAGGGATAGAACCTGCA+AGG | 0.611650 | 4:+55090432 | None:intergenic |
| ATATTGCTTGTCAAGAGACA+TGG | 0.613371 | 4:+55087841 | None:intergenic |
| ATACGAAAGAGAAATTGCCT+TGG | 0.615830 | 4:-55088023 | MsG0480021201.01.T01:CDS |
| CAAGAGACATGGAATATGGA+GGG | 0.618949 | 4:+55087852 | None:intergenic |
| GGAAGTAGTAGATCATTGGT+TGG | 0.626172 | 4:+55087890 | None:intergenic |
| TTCGTTGGAATGTACAACGC+AGG | 0.626741 | 4:-55087580 | MsG0480021201.01.T01:CDS |
| TTTGGTGCTGGAAAATGGGG+AGG | 0.629531 | 4:-55087480 | MsG0480021201.01.T01:CDS |
| CCTTGAAGACGATGAAGACG+AGG | 0.636811 | 4:-55090518 | MsG0480021201.01.T01:CDS |
| AATTAAAACATAAAATAAGG+GGG | 0.653421 | 4:+55087330 | None:intergenic |
| GAGACATGGAATATGGAGGG+CGG | 0.660233 | 4:+55087855 | None:intergenic |
| GCAAAATCATGTTGAAGACG+GGG | 0.661988 | 4:-55087723 | MsG0480021201.01.T01:CDS |
| ATTTAGGTAAGTGATGCAGA+TGG | 0.664359 | 4:-55087212 | MsG0480021201.01.T01:three_prime_UTR |
| GAGTGAAATGATATACAATG+AGG | 0.664799 | 4:+55087358 | None:intergenic |
| AGTGCTCACAGTTGTTGGTG+TGG | 0.679889 | 4:-55087648 | MsG0480021201.01.T01:CDS |
| AGCACCAAAACTCTACCAGG+TGG | 0.702063 | 4:+55087494 | None:intergenic |
| TCGATGTCTCGTGAAAGAGA+GGG | 0.703822 | 4:-55087456 | MsG0480021201.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAACATAAAATAAG+GGG | + | Chr4:55090565-55090584 | None:intergenic | 10.0% |
| !! | AAAATATTCAAAACATGATT+GGG | - | Chr4:55089785-55089804 | MsG0480021201.01.T01:intron | 15.0% |
| !! | AATTAAAACATAAAATAAGG+GGG | + | Chr4:55090564-55090583 | None:intergenic | 15.0% |
| !! | GAAACTTAAAATAAATGTAA+GGG | - | Chr4:55088697-55088716 | MsG0480021201.01.T01:intron | 15.0% |
| !! | TGAAACTTAAAATAAATGTA+AGG | - | Chr4:55088696-55088715 | MsG0480021201.01.T01:intron | 15.0% |
| !!! | ACATTTAAAAAATTTCAAGT+TGG | + | Chr4:55088069-55088088 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTTTAAATGTAG+AGG | - | Chr4:55088071-55088090 | MsG0480021201.01.T01:intron | 15.0% |
| !!! | TTTTAATTCCATTTTTGTTT+TGG | - | Chr4:55090606-55090625 | MsG0480021201.01.T01:CDS | 15.0% |
| !!! | TTTTTCAATTTCTTTTAAGA+TGG | - | Chr4:55089672-55089691 | MsG0480021201.01.T01:intron | 15.0% |
| !! | AAATATAGCATCAAAACAAT+GGG | + | Chr4:55087603-55087622 | None:intergenic | 20.0% |
| !! | ACTTACAACATTATTTAACT+CGG | + | Chr4:55087787-55087806 | None:intergenic | 20.0% |
| !! | AGAGTTAATTCAAAATTTGA+TGG | - | Chr4:55088005-55088024 | MsG0480021201.01.T01:CDS | 20.0% |
| !! | ATTAAGTGTTTCATATAAAG+AGG | + | Chr4:55088218-55088237 | None:intergenic | 20.0% |
| !! | GAAAATATTCAAAACATGAT+TGG | - | Chr4:55089784-55089803 | MsG0480021201.01.T01:intron | 20.0% |
| !! | GAGATAATGAATTAGATTTA+GGG | + | Chr4:55087477-55087496 | None:intergenic | 20.0% |
| !! | TAAATATAGCATCAAAACAA+TGG | + | Chr4:55087604-55087623 | None:intergenic | 20.0% |
| !! | TAATTATTGTGTGTATTTAC+AGG | - | Chr4:55089826-55089845 | MsG0480021201.01.T01:intron | 20.0% |
| !! | TGAGATAATGAATTAGATTT+AGG | + | Chr4:55087478-55087497 | None:intergenic | 20.0% |
| !! | TGTAAATACACACAATAATT+AGG | + | Chr4:55089827-55089846 | None:intergenic | 20.0% |
| !! | TTCAAAATGAGTAATTGTTA+GGG | + | Chr4:55088807-55088826 | None:intergenic | 20.0% |
| !! | TTTCAAAATGAGTAATTGTT+AGG | + | Chr4:55088808-55088827 | None:intergenic | 20.0% |
| !!! | AAGCTTAAAAAGTTTTAAGT+TGG | - | Chr4:55087867-55087886 | MsG0480021201.01.T01:CDS | 20.0% |
| !!! | ATATTTTATTGTTGTTGCTA+TGG | - | Chr4:55089761-55089780 | MsG0480021201.01.T01:intron | 20.0% |
| !!! | ATGGTCGTTTATTTTTTAAA+GGG | - | Chr4:55090698-55090717 | MsG0480021201.01.T01:five_prime_UTR | 20.0% |
| !!! | ATTTATTTTAGGTTTCAAGT+TGG | - | Chr4:55088482-55088501 | MsG0480021201.01.T01:intron | 20.0% |
| !!! | GTATACACAAAATCTTATTT+TGG | - | Chr4:55089036-55089055 | MsG0480021201.01.T01:intron | 20.0% |
| !!! | TATTTTATTGTTGTTGCTAT+GGG | - | Chr4:55089762-55089781 | MsG0480021201.01.T01:intron | 20.0% |
| !!! | TTGTCTTGTACATTTATTTT+AGG | - | Chr4:55088471-55088490 | MsG0480021201.01.T01:intron | 20.0% |
| ! | AAAAAAACAATGGAAGAAGA+AGG | - | Chr4:55087263-55087282 | MsG0480021201.01.T01:three_prime_UTR | 25.0% |
| ! | AAAAACTAGTTACGATATGT+AGG | + | Chr4:55088431-55088450 | None:intergenic | 25.0% |
| ! | AAGCATAATTGCAAAATCAT+AGG | + | Chr4:55088999-55089018 | None:intergenic | 25.0% |
| ! | AATACTACTTCTAAACATGA+TGG | - | Chr4:55088946-55088965 | MsG0480021201.01.T01:intron | 25.0% |
| ! | AATGCTAATTAATAAGCTCA+AGG | - | Chr4:55089913-55089932 | MsG0480021201.01.T01:intron | 25.0% |
| ! | ACATGCATATAAAATACCAT+AGG | + | Chr4:55089366-55089385 | None:intergenic | 25.0% |
| ! | AGAATTGTTACATTAATCGT+AGG | + | Chr4:55089426-55089445 | None:intergenic | 25.0% |
| ! | AGATTTGACCAATTATTATG+AGG | - | Chr4:55088149-55088168 | MsG0480021201.01.T01:intron | 25.0% |
| ! | ATGATTACTGGTCAATATTT+AGG | - | Chr4:55090663-55090682 | MsG0480021201.01.T01:five_prime_UTR | 25.0% |
| ! | CACAAGAAAGAAAAAAACAA+TGG | - | Chr4:55087253-55087272 | MsG0480021201.01.T01:three_prime_UTR | 25.0% |
| ! | TCAAAATTTGACAGAATTGA+TGG | - | Chr4:55088638-55088657 | MsG0480021201.01.T01:intron | 25.0% |
| ! | TCAAAATTTGATGGAATTGA+TGG | - | Chr4:55088014-55088033 | MsG0480021201.01.T01:CDS | 25.0% |
| ! | TTCATGAATTGCTACATAAA+AGG | + | Chr4:55087646-55087665 | None:intergenic | 25.0% |
| !! | ACTTGTTGAACACTAAATAT+AGG | - | Chr4:55089556-55089575 | MsG0480021201.01.T01:intron | 25.0% |
| !! | ATTTTACGTTCAATTGGTAA+GGG | + | Chr4:55089469-55089488 | None:intergenic | 25.0% |
| !! | CATTGTTTGGTTTATATTGT+TGG | - | Chr4:55089720-55089739 | MsG0480021201.01.T01:intron | 25.0% |
| !! | CTAAATAAGTCTTTGTTTGT+TGG | + | Chr4:55087216-55087235 | None:intergenic | 25.0% |
| !! | GATATATTGATTGACGATAA+AGG | + | Chr4:55088741-55088760 | None:intergenic | 25.0% |
| !! | TTGCAAAATCATAGGATTTT+AGG | + | Chr4:55088991-55089010 | None:intergenic | 25.0% |
| !!! | AGGATTTTAGGATTAAAATC+AGG | + | Chr4:55088979-55088998 | None:intergenic | 25.0% |
| !!! | CTTTGTTTGTTGGTTTTTTT+CGG | + | Chr4:55087206-55087225 | None:intergenic | 25.0% |
| !!! | GATGGTCGTTTATTTTTTAA+AGG | - | Chr4:55090697-55090716 | MsG0480021201.01.T01:five_prime_UTR | 25.0% |
| !!! | TAATTCCATTTTTGTTTTGG+TGG | - | Chr4:55090609-55090628 | MsG0480021201.01.T01:CDS | 25.0% |
| !!! | TGATTTTGCTCTTTTTCATT+TGG | + | Chr4:55090157-55090176 | None:intergenic | 25.0% |
| AAATCCAGCCTCATAATAAT+TGG | + | Chr4:55088160-55088179 | None:intergenic | 30.0% | |
| ACAGACTAGAAAATGAGAAT+GGG | - | Chr4:55090338-55090357 | MsG0480021201.01.T01:intron | 30.0% | |
| AGAATCGTTTCAAAGAAAAG+TGG | + | Chr4:55089078-55089097 | None:intergenic | 30.0% | |
| AGATCTACCACTGAAAATAA+GGG | - | Chr4:55090361-55090380 | MsG0480021201.01.T01:intron | 30.0% | |
| ATATACAATGAGGAGAACTA+AGG | + | Chr4:55090526-55090545 | None:intergenic | 30.0% | |
| ATATTGAGTATGTCAGGATT+TGG | - | Chr4:55090271-55090290 | MsG0480021201.01.T01:intron | 30.0% | |
| ATCAACCACCAAAACAAAAA+TGG | + | Chr4:55090617-55090636 | None:intergenic | 30.0% | |
| CAGTACATTATGTCATTGTT+TGG | - | Chr4:55089707-55089726 | MsG0480021201.01.T01:intron | 30.0% | |
| CCAAAAAAGCAAAAATGACA+AGG | + | Chr4:55089522-55089541 | None:intergenic | 30.0% | |
| GAGTGAAATGATATACAATG+AGG | + | Chr4:55090536-55090555 | None:intergenic | 30.0% | |
| GGAGTATAAAGGAAAAGATT+TGG | - | Chr4:55089934-55089953 | MsG0480021201.01.T01:intron | 30.0% | |
| GTATCAATATTGAGTATGTC+AGG | - | Chr4:55090265-55090284 | MsG0480021201.01.T01:intron | 30.0% | |
| TACATTACACTTGAAATGCT+TGG | + | Chr4:55089327-55089346 | None:intergenic | 30.0% | |
| TACTGACATTAGTAACGTAA+AGG | - | Chr4:55088666-55088685 | MsG0480021201.01.T01:intron | 30.0% | |
| TGTAGGAAGTTAGTTACTTA+CGG | + | Chr4:55088414-55088433 | None:intergenic | 30.0% | |
| TTGAAACGATTCTACGATTA+TGG | - | Chr4:55089085-55089104 | MsG0480021201.01.T01:intron | 30.0% | |
| ! | AATAAGCTCAAGGAGTATAA+AGG | - | Chr4:55089923-55089942 | MsG0480021201.01.T01:intron | 30.0% |
| ! | AGCATTTCAAGTGTAATGTA+AGG | - | Chr4:55089327-55089346 | MsG0480021201.01.T01:intron | 30.0% |
| ! | ATCAGGATTTTACGTTCAAT+TGG | + | Chr4:55089475-55089494 | None:intergenic | 30.0% |
| ! | GATTTTACGTTCAATTGGTA+AGG | + | Chr4:55089470-55089489 | None:intergenic | 30.0% |
| ! | TCAACCTAAACCTAATTTGT+TGG | - | Chr4:55087753-55087772 | MsG0480021201.01.T01:CDS | 30.0% |
| ! | TTTTACGTTCAATTGGTAAG+GGG | + | Chr4:55089468-55089487 | None:intergenic | 30.0% |
| ! | TTTTCTGACGTACAATAAGT+TGG | - | Chr4:55088513-55088532 | MsG0480021201.01.T01:intron | 30.0% |
| !! | CAAAGAAAAGTGGATTATAC+AGG | + | Chr4:55089068-55089087 | None:intergenic | 30.0% |
| !!! | AGGTTTTTTTGTCTTACCTA+TGG | - | Chr4:55089347-55089366 | MsG0480021201.01.T01:intron | 30.0% |
| !!! | CCTTGTCATTTTTGCTTTTT+TGG | - | Chr4:55089519-55089538 | MsG0480021201.01.T01:intron | 30.0% |
| !!! | TATCGTAACTAGTTTTTCGA+TGG | - | Chr4:55088434-55088453 | MsG0480021201.01.T01:intron | 30.0% |
| AAAATTCACAAAGCAACCGA+CGG | + | Chr4:55089656-55089675 | None:intergenic | 35.0% | |
| AAACCAACTTCTTCTCCTAA+TGG | - | Chr4:55087347-55087366 | MsG0480021201.01.T01:three_prime_UTR | 35.0% | |
| AACATAAAATAAGGGGGCAA+AGG | + | Chr4:55090558-55090577 | None:intergenic | 35.0% | |
| ACAATGGAAGAAGAAGGAAT+AGG | - | Chr4:55087269-55087288 | MsG0480021201.01.T01:three_prime_UTR | 35.0% | |
| ACTTACGGCGTTATTTAACT+CGG | + | Chr4:55088399-55088418 | None:intergenic | 35.0% | |
| AGCAAAATCATGTTGAAGAC+GGG | - | Chr4:55090167-55090186 | MsG0480021201.01.T01:intron | 35.0% | |
| ATAAACTAGCGACAGTATGT+AGG | + | Chr4:55087819-55087838 | None:intergenic | 35.0% | |
| ATACGAAAGAGAAATTGCCT+TGG | - | Chr4:55089868-55089887 | MsG0480021201.01.T01:intron | 35.0% | |
| ATATTGCTTGTCAAGAGACA+TGG | + | Chr4:55090053-55090072 | None:intergenic | 35.0% | |
| ATTTAGGTAAGTGATGCAGA+TGG | - | Chr4:55090679-55090698 | MsG0480021201.01.T01:five_prime_UTR | 35.0% | |
| CAATGGAAGAAGAAGGAATA+GGG | - | Chr4:55087270-55087289 | MsG0480021201.01.T01:three_prime_UTR | 35.0% | |
| CACAGACTAGAAAATGAGAA+TGG | - | Chr4:55090337-55090356 | MsG0480021201.01.T01:intron | 35.0% | |
| CATGAAACACTTGACAAACA+CGG | - | Chr4:55087660-55087679 | MsG0480021201.01.T01:CDS | 35.0% | |
| CCACATCCATAGTTTATATC+AGG | + | Chr4:55090493-55090512 | None:intergenic | 35.0% | |
| CCTGATATAAACTATGGATG+TGG | - | Chr4:55090490-55090509 | MsG0480021201.01.T01:CDS | 35.0% | |
| GAGATCTACCACTGAAAATA+AGG | - | Chr4:55090360-55090379 | MsG0480021201.01.T01:intron | 35.0% | |
| GAGCAAAATCATGTTGAAGA+CGG | - | Chr4:55090166-55090185 | MsG0480021201.01.T01:intron | 35.0% | |
| GCAACACCTGATATAAACTA+TGG | - | Chr4:55090484-55090503 | MsG0480021201.01.T01:CDS | 35.0% | |
| GGAAAATCATATTCGTGTAG+TGG | + | Chr4:55088886-55088905 | None:intergenic | 35.0% | |
| GGGGCTAAAAATTCAAGAAA+AGG | - | Chr4:55090187-55090206 | MsG0480021201.01.T01:intron | 35.0% | |
| GTCACCAACAAATTAGGTTT+AGG | + | Chr4:55087760-55087779 | None:intergenic | 35.0% | |
| GTTATAGTAGTTCGTTCAAC+AGG | - | Chr4:55087526-55087545 | MsG0480021201.01.T01:CDS | 35.0% | |
| TATTGTAGTAGCTGAGTGAT+TGG | - | Chr4:55090639-55090658 | MsG0480021201.01.T01:exon | 35.0% | |
| TCAACCTAAACCTAAATCGT+TGG | - | Chr4:55088337-55088356 | MsG0480021201.01.T01:intron | 35.0% | |
| TGTATACCCATAATCGCTAA+GGG | + | Chr4:55089023-55089042 | None:intergenic | 35.0% | |
| TTAGATGTATCTACGACTGT+CGG | - | Chr4:55087705-55087724 | MsG0480021201.01.T01:CDS | 35.0% | |
| TTATTTAACTCGGAGTGGTA+CGG | + | Chr4:55088389-55088408 | None:intergenic | 35.0% | |
| TTGACCAATTATTATGAGGC+TGG | - | Chr4:55088153-55088172 | MsG0480021201.01.T01:intron | 35.0% | |
| TTGTCAAGAGACATGGAATA+TGG | + | Chr4:55090046-55090065 | None:intergenic | 35.0% | |
| ! | ACCAGTTTGAAGCTAAAATC+TGG | - | Chr4:55088094-55088113 | MsG0480021201.01.T01:intron | 35.0% |
| ! | ATTTGGTCCTAATTTGCAGA+AGG | - | Chr4:55090288-55090307 | MsG0480021201.01.T01:intron | 35.0% |
| ! | TACTGTCGCTAGTTTATCAA+TGG | - | Chr4:55087822-55087841 | MsG0480021201.01.T01:CDS | 35.0% |
| ! | TTCAGTTTAAAACGTCAACG+TGG | - | Chr4:55087928-55087947 | MsG0480021201.01.T01:CDS | 35.0% |
| !! | AAATTTCAAGTTGGTCCCTT+AGG | + | Chr4:55088060-55088079 | None:intergenic | 35.0% |
| !! | ACGATTTAGGTTTAGGTTGA+AGG | + | Chr4:55088337-55088356 | None:intergenic | 35.0% |
| !! | CACACTTGATAATGTGATTG+AGG | - | Chr4:55090120-55090139 | MsG0480021201.01.T01:intron | 35.0% |
| !!! | ACCAGATTTTAGCTTCAAAC+TGG | + | Chr4:55088098-55088117 | None:intergenic | 35.0% |
| !!! | TAGGAGAAGAAGTTGGTTTT+TGG | + | Chr4:55087346-55087365 | None:intergenic | 35.0% |
| AAATTCACAAAGCAACCGAC+GGG | + | Chr4:55089655-55089674 | None:intergenic | 40.0% | |
| ACCACTGAAAATAAGGGTGA+TGG | - | Chr4:55090367-55090386 | MsG0480021201.01.T01:intron | 40.0% | |
| AGACCATTAGGAGAAGAAGT+TGG | + | Chr4:55087353-55087372 | None:intergenic | 40.0% | |
| AGGAGGAAGTAGTAGATCAT+TGG | + | Chr4:55090008-55090027 | None:intergenic | 40.0% | |
| ATATAGGTATATCTCCCAGC+TGG | - | Chr4:55089572-55089591 | MsG0480021201.01.T01:intron | 40.0% | |
| ATCCCTTCTGTCAATAAGTC+CGG | - | Chr4:55090082-55090101 | MsG0480021201.01.T01:intron | 40.0% | |
| ATGCCAACATCAGTAACCTA+AGG | - | Chr4:55088041-55088060 | MsG0480021201.01.T01:CDS | 40.0% | |
| ATTTAGGGATAGAACCTGCA+AGG | + | Chr4:55087462-55087481 | None:intergenic | 40.0% | |
| CAACGAACCTTCTGCAAATT+AGG | + | Chr4:55090298-55090317 | None:intergenic | 40.0% | |
| CAAGAGACATGGAATATGGA+GGG | + | Chr4:55090042-55090061 | None:intergenic | 40.0% | |
| CAAGCAAGGTAGTCAAAATC+AGG | + | Chr4:55089492-55089511 | None:intergenic | 40.0% | |
| CATGATTGGGATTGCATTTC+TGG | - | Chr4:55089798-55089817 | MsG0480021201.01.T01:intron | 40.0% | |
| CCAATGTTCAAATTCCAGCT+GGG | + | Chr4:55089589-55089608 | None:intergenic | 40.0% | |
| CCAGCTGGAATTTGAACATT+GGG | - | Chr4:55089587-55089606 | MsG0480021201.01.T01:intron | 40.0% | |
| CTATGTAGCACCAACGATTT+AGG | + | Chr4:55088350-55088369 | None:intergenic | 40.0% | |
| GATCTTCAACCTAAGTTCTG+TGG | + | Chr4:55087312-55087331 | None:intergenic | 40.0% | |
| GCAAAATCATGTTGAAGACG+GGG | - | Chr4:55090168-55090187 | MsG0480021201.01.T01:intron | 40.0% | |
| GGAAGTAGTAGATCATTGGT+TGG | + | Chr4:55090004-55090023 | None:intergenic | 40.0% | |
| GGACATGTCACCAACAAATT+AGG | + | Chr4:55087766-55087785 | None:intergenic | 40.0% | |
| GTGTATACCCATAATCGCTA+AGG | + | Chr4:55089024-55089043 | None:intergenic | 40.0% | |
| GTGTTCAACAAGTCTCAGAT+AGG | + | Chr4:55089549-55089568 | None:intergenic | 40.0% | |
| TCAAGAGACATGGAATATGG+AGG | + | Chr4:55090043-55090062 | None:intergenic | 40.0% | |
| TGAGTGATTGGCATGATTAC+TGG | - | Chr4:55090651-55090670 | MsG0480021201.01.T01:five_prime_UTR | 40.0% | |
| TGCCAACATCAGTAACCTAA+GGG | - | Chr4:55088042-55088061 | MsG0480021201.01.T01:CDS | 40.0% | |
| TGTCATGTAAGTAGCGTCAT+AGG | - | Chr4:55088290-55088309 | MsG0480021201.01.T01:intron | 40.0% | |
| TGTGATTAATCCATTGCGAC+CGG | + | Chr4:55090104-55090123 | None:intergenic | 40.0% | |
| ! | ACTGTTTTCAATCTCAGCCA+AGG | + | Chr4:55089888-55089907 | None:intergenic | 40.0% |
| ! | AGCACCAACGATTTAGGTTT+AGG | + | Chr4:55088344-55088363 | None:intergenic | 40.0% |
| ! | CTAATTTGCAGAAGGTTCGT+TGG | - | Chr4:55090296-55090315 | MsG0480021201.01.T01:intron | 40.0% |
| !! | CTAAATCGTTGGTGCTACAT+AGG | - | Chr4:55088348-55088367 | MsG0480021201.01.T01:intron | 40.0% |
| !!! | AGAGTTTTGGTGCTGGAAAA+TGG | - | Chr4:55090406-55090425 | MsG0480021201.01.T01:intron | 40.0% |
| !!! | AGTTTTGGTGCTGGAAAATG+GGG | - | Chr4:55090408-55090427 | MsG0480021201.01.T01:intron | 40.0% |
| !!! | GAGTTTTGGTGCTGGAAAAT+GGG | - | Chr4:55090407-55090426 | MsG0480021201.01.T01:intron | 40.0% |
| !!! | TCCATCACCCTTATTTTCAG+TGG | + | Chr4:55090371-55090390 | None:intergenic | 40.0% |
| AAAGCAGTGCTCACAGTTGT+TGG | - | Chr4:55090238-55090257 | MsG0480021201.01.T01:intron | 45.0% | |
| AAGACGAGGATGCTACTGAT+AGG | - | Chr4:55087387-55087406 | MsG0480021201.01.T01:exon | 45.0% | |
| ACTATGTCTAAACGTCCACG+TGG | + | Chr4:55088613-55088632 | None:intergenic | 45.0% | |
| ACTCTGTCTAAACATCCACG+TGG | + | Chr4:55087990-55088009 | None:intergenic | 45.0% | |
| AGCCACGTGGACATTTCAAA+CGG | + | Chr4:55088556-55088575 | None:intergenic | 45.0% | |
| AGTTCGTTCAACAGGAACGT+GGG | - | Chr4:55087534-55087553 | MsG0480021201.01.T01:CDS | 45.0% | |
| ATGCTTGCCCTTAGCGATTA+TGG | - | Chr4:55089013-55089032 | MsG0480021201.01.T01:intron | 45.0% | |
| CACTGTTTCACTGGCAAAAG+TGG | + | Chr4:55089978-55089997 | None:intergenic | 45.0% | |
| CCATCTCTGCTATCAGTAGA+AGG | - | Chr4:55088904-55088923 | MsG0480021201.01.T01:intron | 45.0% | |
| CCCAATGTTCAAATTCCAGC+TGG | + | Chr4:55089590-55089609 | None:intergenic | 45.0% | |
| CCCAGCTGGAATTTGAACAT+TGG | - | Chr4:55089586-55089605 | MsG0480021201.01.T01:intron | 45.0% | |
| CCTTCTACTGATAGCAGAGA+TGG | + | Chr4:55088907-55088926 | None:intergenic | 45.0% | |
| CGATTCTACGATTATGGTCG+CGG | - | Chr4:55089091-55089110 | MsG0480021201.01.T01:intron | 45.0% | |
| GACACACACGTGGATAACTT+CGG | - | Chr4:55088582-55088601 | MsG0480021201.01.T01:intron | 45.0% | |
| GACCGGACTTATTGACAGAA+GGG | + | Chr4:55090087-55090106 | None:intergenic | 45.0% | |
| GACGCACACATGGATAACTT+CGG | - | Chr4:55087959-55087978 | MsG0480021201.01.T01:CDS | 45.0% | |
| GTCCCTTAGGTTACTGATGT+TGG | + | Chr4:55088047-55088066 | None:intergenic | 45.0% | |
| GTTGCAGCAACAGCTGAAAA+TGG | + | Chr4:55090469-55090488 | None:intergenic | 45.0% | |
| TAGTTCGTTCAACAGGAACG+TGG | - | Chr4:55087533-55087552 | MsG0480021201.01.T01:CDS | 45.0% | |
| TCGATGTCTCGTGAAAGAGA+GGG | - | Chr4:55090435-55090454 | MsG0480021201.01.T01:intron | 45.0% | |
| TCGTCTTCAAGGAGACCATT+AGG | + | Chr4:55087365-55087384 | None:intergenic | 45.0% | |
| TGCTTGCCCTTAGCGATTAT+GGG | - | Chr4:55089014-55089033 | MsG0480021201.01.T01:intron | 45.0% | |
| TTCGTTGGAATGTACAACGC+AGG | - | Chr4:55090311-55090330 | MsG0480021201.01.T01:intron | 45.0% | |
| ! | CACTTTTGCCAGTGAAACAG+TGG | - | Chr4:55089976-55089995 | MsG0480021201.01.T01:intron | 45.0% |
| ! | GACAAGGCATCTTACAAGCA+AGG | + | Chr4:55089506-55089525 | None:intergenic | 45.0% |
| ! | TTCCGTTTGAAATGTCCACG+TGG | - | Chr4:55088551-55088570 | MsG0480021201.01.T01:intron | 45.0% |
| !! | TCATAGGAGTGTCGAACACT+TGG | - | Chr4:55088306-55088325 | MsG0480021201.01.T01:intron | 45.0% |
| !! | AAAAATTAAAACATAAAATA+AGG | + | Chr4:55090567-55090586 | None:intergenic | 5.0% |
| !! | AAAATTAAAACATAAAATAA+GGG | + | Chr4:55090566-55090585 | None:intergenic | 5.0% |
| ACACACGTGGATAACTTCGG+AGG | - | Chr4:55088585-55088604 | MsG0480021201.01.T01:intron | 50.0% | |
| AGACATGGAATATGGAGGGC+GGG | + | Chr4:55090038-55090057 | None:intergenic | 50.0% | |
| AGCACCAAAACTCTACCAGG+TGG | + | Chr4:55090400-55090419 | None:intergenic | 50.0% | |
| AGTGCTCACAGTTGTTGGTG+TGG | - | Chr4:55090243-55090262 | MsG0480021201.01.T01:intron | 50.0% | |
| CCTCGTCTTCATCGTCTTCA+AGG | + | Chr4:55087376-55087395 | None:intergenic | 50.0% | |
| CCTTGAAGACGATGAAGACG+AGG | - | Chr4:55087373-55087392 | MsG0480021201.01.T01:three_prime_UTR | 50.0% | |
| CGACCGGACTTATTGACAGA+AGG | + | Chr4:55090088-55090107 | None:intergenic | 50.0% | |
| CGGCGTTATTTAACTCGGAG+TGG | + | Chr4:55088394-55088413 | None:intergenic | 50.0% | |
| CGTGTAGTGGCAAACACTGA+AGG | + | Chr4:55088873-55088892 | None:intergenic | 50.0% | |
| CTCGATGTCTCGTGAAAGAG+AGG | - | Chr4:55090434-55090453 | MsG0480021201.01.T01:intron | 50.0% | |
| GACTCAGCTTTCTTCCTTGC+AGG | - | Chr4:55087445-55087464 | MsG0480021201.01.T01:CDS | 50.0% | |
| GAGACATGGAATATGGAGGG+CGG | + | Chr4:55090039-55090058 | None:intergenic | 50.0% | |
| GCACACATGGATAACTTCGG+AGG | - | Chr4:55087962-55087981 | MsG0480021201.01.T01:CDS | 50.0% | |
| GTCAATAAGTCCGGTCGCAA+TGG | - | Chr4:55090091-55090110 | MsG0480021201.01.T01:intron | 50.0% | |
| TAGCGAGAGCCACAGAACTT+AGG | - | Chr4:55087300-55087319 | MsG0480021201.01.T01:three_prime_UTR | 50.0% | |
| TCCAGCACCAAAACTCTACC+AGG | + | Chr4:55090403-55090422 | None:intergenic | 50.0% | |
| TGAACATTGGGTCGCCAAGT+GGG | - | Chr4:55089599-55089618 | MsG0480021201.01.T01:intron | 50.0% | |
| TTCTACGATTATGGTCGCGG+TGG | - | Chr4:55089094-55089113 | MsG0480021201.01.T01:intron | 50.0% | |
| TTGAACATTGGGTCGCCAAG+TGG | - | Chr4:55089598-55089617 | MsG0480021201.01.T01:intron | 50.0% | |
| TTGCGATGCACTCGAAGCTT+TGG | - | Chr4:55087421-55087440 | MsG0480021201.01.T01:CDS | 50.0% | |
| ! | GTGTCCACCTGGTAGAGTTT+TGG | - | Chr4:55090393-55090412 | MsG0480021201.01.T01:intron | 50.0% |
| !! | ACCTGGTAGAGTTTTGGTGC+TGG | - | Chr4:55090399-55090418 | MsG0480021201.01.T01:intron | 50.0% |
| !! | TGTCGGTGTCATGCAAGTGT+TGG | - | Chr4:55087722-55087741 | MsG0480021201.01.T01:CDS | 50.0% |
| !! | TTTGGTGCTGGAAAATGGGG+AGG | - | Chr4:55090411-55090430 | MsG0480021201.01.T01:intron | 50.0% |
| ATGGAATATGGAGGGCGGGT+TGG | + | Chr4:55090034-55090053 | None:intergenic | 55.0% | |
| GAAGGGGCTAGATTCCCACT+TGG | + | Chr4:55089616-55089635 | None:intergenic | 55.0% | |
| GGCTAACAGAGACACACACG+TGG | - | Chr4:55088572-55088591 | MsG0480021201.01.T01:intron | 55.0% | |
| GGCTAACAGAGACGCACACA+TGG | - | Chr4:55087949-55087968 | MsG0480021201.01.T01:CDS | 55.0% | |
| GTGTGTCTCTGTTAGCCACG+TGG | + | Chr4:55088569-55088588 | None:intergenic | 55.0% | |
| TACGATTATGGTCGCGGTGG+TGG | - | Chr4:55089097-55089116 | MsG0480021201.01.T01:intron | 55.0% | |
| TCACAAAGCAACCGACGGGT+GGG | + | Chr4:55089651-55089670 | None:intergenic | 55.0% | |
| TTCACAAAGCAACCGACGGG+TGG | + | Chr4:55089652-55089671 | None:intergenic | 55.0% | |
| ! | GGTTGGCTCCACTGTTTCAC+TGG | + | Chr4:55089987-55090006 | None:intergenic | 55.0% |
| !! | ATAACTTCGGAGGTGCCACG+TGG | - | Chr4:55087972-55087991 | MsG0480021201.01.T01:CDS | 55.0% |
| !! | CGCGGTGGTGGAACTACAAA+AGG | - | Chr4:55089109-55089128 | MsG0480021201.01.T01:intron | 55.0% |
| !! | TATGGAGGGCGGGTTGGATA+AGG | + | Chr4:55090028-55090047 | None:intergenic | 55.0% |
| AAAGCAACCGACGGGTGGGA+CGG | + | Chr4:55089647-55089666 | None:intergenic | 60.0% | |
| GTGGGACGGGTCTAGCAGAA+GGG | + | Chr4:55089633-55089652 | None:intergenic | 60.0% | |
| TGGGACGGGTCTAGCAGAAG+GGG | + | Chr4:55089632-55089651 | None:intergenic | 60.0% | |
| !! | GGTGATGGACAGTGTCCACC+TGG | - | Chr4:55090382-55090401 | MsG0480021201.01.T01:intron | 60.0% |
| AAGCAACCGACGGGTGGGAC+GGG | + | Chr4:55089646-55089665 | None:intergenic | 65.0% | |
| GGTGGGACGGGTCTAGCAGA+AGG | + | Chr4:55089634-55089653 | None:intergenic | 65.0% | |
| !! | GGAGGGCGGGTTGGATAAGG+AGG | + | Chr4:55090025-55090044 | None:intergenic | 65.0% |
| GCTAGACCCGTCCCACCCGT+CGG | - | Chr4:55089637-55089656 | MsG0480021201.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 55087179 | 55090734 | 55087179 | ID=MsG0480021201.01;Name=MsG0480021201.01 |
| Chr4 | mRNA | 55087179 | 55090734 | 55087179 | ID=MsG0480021201.01.T01;Parent=MsG0480021201.01;Name=MsG0480021201.01.T01;_AED=0.49;_eAED=0.49;_QI=93|1|1|1|1|1|2|218|287 |
| Chr4 | exon | 55087179 | 55088065 | 55087179 | ID=MsG0480021201.01.T01:exon:18828;Parent=MsG0480021201.01.T01 |
| Chr4 | exon | 55090447 | 55090734 | 55090447 | ID=MsG0480021201.01.T01:exon:18827;Parent=MsG0480021201.01.T01 |
| Chr4 | five_prime_UTR | 55090642 | 55090734 | 55090642 | ID=MsG0480021201.01.T01:five_prime_utr;Parent=MsG0480021201.01.T01 |
| Chr4 | CDS | 55090447 | 55090641 | 55090447 | ID=MsG0480021201.01.T01:cds;Parent=MsG0480021201.01.T01 |
| Chr4 | CDS | 55087397 | 55088065 | 55087397 | ID=MsG0480021201.01.T01:cds;Parent=MsG0480021201.01.T01 |
| Chr4 | three_prime_UTR | 55087179 | 55087396 | 55087179 | ID=MsG0480021201.01.T01:three_prime_utr;Parent=MsG0480021201.01.T01 |
| Gene Sequence |
| Protein sequence |
