Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018338.01.T01 | PNX97591.1 | 75.532 | 94 | 9 | 1 | 1 | 94 | 52 | 131 | 2.07E-37 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018338.01.T01 | Q9LVZ5 | 57.647 | 85 | 22 | 1 | 10 | 94 | 48 | 118 | 4.65E-26 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018338.01.T01 | A0A2K3N3E6 | 75.532 | 94 | 9 | 1 | 1 | 94 | 52 | 131 | 9.88e-38 | 137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0480018338.01 | 0.822732 | 2.023826e-53 | 1.708249e-50 |
| MsG0080048918.01 | MsG0480018338.01 | 0.838699 | 2.461768e-57 | 3.323815e-54 |
| MsG0080048993.01 | MsG0480018338.01 | 0.840912 | 6.533251e-58 | 9.444221e-55 |
| MsG0080049024.01 | MsG0480018338.01 | 0.872296 | 3.546818e-67 | 1.476245e-63 |
| MsG0080049070.01 | MsG0480018338.01 | 0.904134 | 1.685772e-79 | 2.571197e-75 |
| MsG0180000040.01 | MsG0480018338.01 | 0.890228 | 1.190857e-73 | 9.927006e-70 |
| MsG0180000489.01 | MsG0480018338.01 | 0.804540 | 2.057352e-49 | 1.063527e-46 |
| MsG0180000490.01 | MsG0480018338.01 | 0.826256 | 2.998253e-54 | 2.797258e-51 |
| MsG0180000491.01 | MsG0480018338.01 | 0.825053 | 5.782125e-54 | 5.213036e-51 |
| MsG0180000549.01 | MsG0480018338.01 | 0.847436 | 1.158199e-59 | 2.058483e-56 |
| MsG0180000942.01 | MsG0480018338.01 | 0.839574 | 1.460319e-57 | 2.025017e-54 |
| MsG0180000976.01 | MsG0480018338.01 | 0.887569 | 1.271572e-72 | 9.506653e-69 |
| MsG0180001137.01 | MsG0480018338.01 | 0.847557 | 1.072514e-59 | 1.913687e-56 |
| MsG0180001548.01 | MsG0480018338.01 | 0.897805 | 9.844025e-77 | 1.130732e-72 |
| MsG0180001664.01 | MsG0480018338.01 | 0.803107 | 4.081394e-49 | 2.033564e-46 |
| MsG0180001864.01 | MsG0480018338.01 | 0.808808 | 2.581825e-50 | 1.490518e-47 |
| MsG0180002238.01 | MsG0480018338.01 | -0.803507 | 3.373667e-49 | 1.698401e-46 |
| MsG0180003196.01 | MsG0480018338.01 | 0.890546 | 8.935791e-74 | 7.548112e-70 |
| MsG0180003320.01 | MsG0480018338.01 | -0.800737 | 1.252751e-48 | 5.877490e-46 |
| MsG0180003351.01 | MsG0480018338.01 | 0.812883 | 3.387430e-51 | 2.179165e-48 |
| MsG0180003405.01 | MsG0480018338.01 | 0.875023 | 4.269625e-68 | 1.964048e-64 |
| MsG0180003617.01 | MsG0480018338.01 | 0.831261 | 1.845423e-55 | 1.991958e-52 |
| MsG0180003637.01 | MsG0480018338.01 | -0.811105 | 8.270173e-51 | 5.074476e-48 |
| MsG0180003758.01 | MsG0480018338.01 | 0.817569 | 3.080463e-52 | 2.251384e-49 |
| MsG0180004121.01 | MsG0480018338.01 | -0.805358 | 1.387563e-49 | 7.325943e-47 |
| MsG0180004687.01 | MsG0480018338.01 | 0.840835 | 6.845064e-58 | 9.871286e-55 |
| MsG0180004714.01 | MsG0480018338.01 | 0.884073 | 2.618585e-71 | 1.703263e-67 |
| MsG0180004787.01 | MsG0480018338.01 | 0.803684 | 3.099245e-49 | 1.567293e-46 |
| MsG0180004792.01 | MsG0480018338.01 | 0.896745 | 2.746453e-76 | 3.010844e-72 |
| MsG0180004979.01 | MsG0480018338.01 | 0.837935 | 3.875297e-57 | 5.111798e-54 |
| MsG0180005416.01 | MsG0480018338.01 | 0.802452 | 5.572230e-49 | 2.730578e-46 |
| MsG0180005636.01 | MsG0480018338.01 | -0.825257 | 5.173905e-54 | 4.691812e-51 |
| MsG0180005666.01 | MsG0480018338.01 | 0.909074 | 8.514014e-82 | 1.627185e-77 |
| MsG0180005822.01 | MsG0480018338.01 | 0.818747 | 1.668181e-52 | 1.259385e-49 |
| MsG0180005898.01 | MsG0480018338.01 | 0.852389 | 4.766074e-61 | 9.943497e-58 |
| MsG0180006028.01 | MsG0480018338.01 | 0.856491 | 3.103939e-62 | 7.422554e-59 |
| MsG0180006135.01 | MsG0480018338.01 | 0.827711 | 1.345591e-54 | 1.309352e-51 |
| MsG0180006176.01 | MsG0480018338.01 | 0.801982 | 6.962128e-49 | 3.370882e-46 |
| MsG0180006217.01 | MsG0480018338.01 | 0.880916 | 3.698527e-70 | 2.123543e-66 |
| MsG0180006253.01 | MsG0480018338.01 | -0.805901 | 1.067230e-49 | 5.713808e-47 |
| MsG0280006400.01 | MsG0480018338.01 | 0.826335 | 2.870010e-54 | 2.683722e-51 |
| MsG0280006446.01 | MsG0480018338.01 | -0.809695 | 1.666576e-50 | 9.852061e-48 |
| MsG0280010584.01 | MsG0480018338.01 | 0.811764 | 5.947671e-51 | 3.713419e-48 |
| MsG0280010605.01 | MsG0480018338.01 | 0.821961 | 3.055472e-53 | 2.522756e-50 |
| MsG0280011110.01 | MsG0480018338.01 | -0.808136 | 3.592121e-50 | 2.037657e-47 |
| MsG0280011218.01 | MsG0480018338.01 | 0.843941 | 1.027972e-58 | 1.634092e-55 |
| MsG0280011269.01 | MsG0480018338.01 | -0.803869 | 2.837436e-49 | 1.441841e-46 |
| MsG0280011271.01 | MsG0480018338.01 | -0.809183 | 2.146434e-50 | 1.251711e-47 |
| MsG0280011281.01 | MsG0480018338.01 | 0.821900 | 3.156809e-53 | 2.602092e-50 |
| MsG0380011632.01 | MsG0480018338.01 | 0.806399 | 8.384387e-50 | 4.546119e-47 |
| MsG0380012782.01 | MsG0480018338.01 | 0.847279 | 1.278606e-59 | 2.260950e-56 |
| MsG0380012804.01 | MsG0480018338.01 | 0.811332 | 7.383414e-51 | 4.557297e-48 |
| MsG0380012868.01 | MsG0480018338.01 | 0.823738 | 1.178258e-53 | 1.023311e-50 |
| MsG0380014231.01 | MsG0480018338.01 | 0.831747 | 1.400649e-55 | 1.534143e-52 |
| MsG0380015456.01 | MsG0480018338.01 | 0.859604 | 3.686620e-63 | 9.791286e-60 |
| MsG0380015744.01 | MsG0480018338.01 | 0.835000 | 2.164843e-56 | 2.612731e-53 |
| MsG0380015795.01 | MsG0480018338.01 | 0.814094 | 1.835258e-51 | 1.219973e-48 |
| MsG0380016172.01 | MsG0480018338.01 | 0.823375 | 1.432492e-53 | 1.231132e-50 |
| MsG0380016456.01 | MsG0480018338.01 | 0.832953 | 7.043215e-56 | 7.994235e-53 |
| MsG0380016490.01 | MsG0480018338.01 | -0.816636 | 4.993323e-52 | 3.557339e-49 |
| MsG0380016568.01 | MsG0480018338.01 | 0.850553 | 1.576305e-60 | 3.099251e-57 |
| MsG0380016861.01 | MsG0480018338.01 | 0.803957 | 2.720546e-49 | 1.385553e-46 |
| MsG0380016997.01 | MsG0480018338.01 | 0.832098 | 1.147420e-55 | 1.269611e-52 |
| MsG0380017014.01 | MsG0480018338.01 | -0.804284 | 2.325626e-49 | 1.194358e-46 |
| MsG0380017162.01 | MsG0480018338.01 | 0.844553 | 7.041309e-59 | 1.140914e-55 |
| MsG0380017411.01 | MsG0480018338.01 | -0.833899 | 4.090985e-56 | 4.777352e-53 |
| MsG0380017427.01 | MsG0480018338.01 | 0.874642 | 5.758596e-68 | 2.611904e-64 |
| MsG0380017666.01 | MsG0480018338.01 | -0.818819 | 1.606088e-52 | 1.214910e-49 |
| MsG0380017773.01 | MsG0480018338.01 | 0.816934 | 4.281702e-52 | 3.075509e-49 |
| MsG0380017793.01 | MsG0480018338.01 | 0.810995 | 8.732967e-51 | 5.343644e-48 |
| MsG0480018202.01 | MsG0480018338.01 | 0.804331 | 2.273452e-49 | 1.168971e-46 |
| MsG0480018203.01 | MsG0480018338.01 | 0.802454 | 5.568895e-49 | 2.729020e-46 |
| MsG0480018337.01 | MsG0480018338.01 | 0.932743 | 5.378716e-95 | 3.667602e-90 |
| MsG0480018338.01 | MsG0480018676.01 | 0.806039 | 9.983032e-50 | 5.363676e-47 |
| MsG0480018338.01 | MsG0480018997.01 | 0.836790 | 7.611937e-57 | 9.695274e-54 |
| MsG0480018338.01 | MsG0480019644.01 | 0.863765 | 1.970191e-64 | 6.042843e-61 |
| MsG0480018338.01 | MsG0480019812.01 | 0.879162 | 1.560503e-69 | 8.372183e-66 |
| MsG0480018338.01 | MsG0480020473.01 | 0.876309 | 1.546868e-68 | 7.463474e-65 |
| MsG0480018338.01 | MsG0480020596.01 | 0.872631 | 2.742160e-67 | 1.155664e-63 |
| MsG0480018338.01 | MsG0480020797.01 | -0.810826 | 9.503874e-51 | 5.788561e-48 |
| MsG0480018338.01 | MsG0480020938.01 | 0.805849 | 1.094619e-49 | 5.852869e-47 |
| MsG0480018338.01 | MsG0480021038.01 | 0.877692 | 5.124141e-69 | 2.601281e-65 |
| MsG0480018338.01 | MsG0480021101.01 | 0.831254 | 1.852250e-55 | 1.998924e-52 |
| MsG0480018338.01 | MsG0480021124.01 | 0.861938 | 7.215430e-64 | 2.076286e-60 |
| MsG0480018338.01 | MsG0480021213.01 | 0.890531 | 9.054996e-74 | 7.642633e-70 |
| MsG0480018338.01 | MsG0480021231.01 | -0.812494 | 4.122404e-51 | 2.625047e-48 |
| MsG0480018338.01 | MsG0480021497.01 | 0.868171 | 7.959932e-66 | 2.852112e-62 |
| MsG0480018338.01 | MsG0480021967.01 | 0.912488 | 1.838927e-83 | 4.146170e-79 |
| MsG0480018338.01 | MsG0480022088.01 | 0.819936 | 8.938863e-53 | 6.975240e-50 |
| MsG0480018338.01 | MsG0480022113.01 | 0.842596 | 2.348408e-58 | 3.578292e-55 |
| MsG0480018338.01 | MsG0480022154.01 | 0.887816 | 1.023572e-72 | 7.729632e-69 |
| MsG0480018338.01 | MsG0480022162.01 | 0.866783 | 2.214666e-65 | 7.556556e-62 |
| MsG0480018338.01 | MsG0480022240.01 | 0.807555 | 4.773579e-50 | 2.666864e-47 |
| MsG0480018338.01 | MsG0480022411.01 | 0.831872 | 1.304829e-55 | 1.434499e-52 |
| MsG0480018338.01 | MsG0480022458.01 | 0.833010 | 6.815812e-56 | 7.749777e-53 |
| MsG0480018338.01 | MsG0480022622.01 | 0.816561 | 5.190066e-52 | 3.689943e-49 |
| MsG0480018338.01 | MsG0480023103.01 | 0.834426 | 3.018675e-56 | 3.581244e-53 |
| MsG0480018338.01 | MsG0480023104.01 | 0.840722 | 7.325204e-58 | 1.052681e-54 |
| MsG0480018338.01 | MsG0480023148.01 | 0.837460 | 5.131201e-57 | 6.669978e-54 |
| MsG0480018338.01 | MsG0480023169.01 | 0.831525 | 1.588613e-55 | 1.728471e-52 |
| MsG0480018338.01 | MsG0480023173.01 | 0.864683 | 1.019174e-64 | 3.227782e-61 |
| MsG0480018338.01 | MsG0480023211.01 | 0.809878 | 1.521846e-50 | 9.040008e-48 |
| MsG0480018338.01 | MsG0480023326.01 | 0.850847 | 1.302894e-60 | 2.586768e-57 |
| MsG0480018338.01 | MsG0480023454.01 | -0.815620 | 8.419012e-52 | 5.834179e-49 |
| MsG0480018338.01 | MsG0480023466.01 | 0.905480 | 4.107599e-80 | 6.656636e-76 |
| MsG0480018338.01 | MsG0480023531.01 | 0.832916 | 7.193006e-56 | 8.155075e-53 |
| MsG0480018338.01 | MsG0480023704.01 | 0.822018 | 2.965325e-53 | 2.452200e-50 |
| MsG0480018338.01 | MsG0480023705.01 | 0.838145 | 3.421883e-57 | 4.541983e-54 |
| MsG0480018338.01 | MsG0480023851.01 | 0.839154 | 1.877758e-57 | 2.570413e-54 |
| MsG0480018338.01 | MsG0480023987.01 | -0.814148 | 1.785950e-51 | 1.188963e-48 |
| MsG0480018338.01 | MsG0480024011.01 | 0.825145 | 5.499565e-54 | 4.971531e-51 |
| MsG0480018338.01 | MsG0580024087.01 | -0.809222 | 2.105076e-50 | 1.228890e-47 |
| MsG0480018338.01 | MsG0580024386.01 | 0.821041 | 4.985307e-53 | 4.011682e-50 |
| MsG0480018338.01 | MsG0580024872.01 | 0.804114 | 2.522673e-49 | 1.289955e-46 |
| MsG0480018338.01 | MsG0580025105.01 | 0.802861 | 4.588767e-49 | 2.272184e-46 |
| MsG0480018338.01 | MsG0580025252.01 | 0.817695 | 2.886189e-52 | 2.116725e-49 |
| MsG0480018338.01 | MsG0580025259.01 | 0.810048 | 1.399024e-50 | 8.347542e-48 |
| MsG0480018338.01 | MsG0580025301.01 | 0.809287 | 2.038666e-50 | 1.192180e-47 |
| MsG0480018338.01 | MsG0580025447.01 | 0.808985 | 2.366246e-50 | 1.372536e-47 |
| MsG0480018338.01 | MsG0580025565.01 | 0.845791 | 3.258471e-59 | 5.493198e-56 |
| MsG0480018338.01 | MsG0580026291.01 | 0.804825 | 1.793825e-49 | 9.342422e-47 |
| MsG0480018338.01 | MsG0580026298.01 | 0.820738 | 5.853157e-53 | 4.669839e-50 |
| MsG0480018338.01 | MsG0580027183.01 | 0.857746 | 1.323169e-62 | 3.299695e-59 |
| MsG0480018338.01 | MsG0580027189.01 | 0.818238 | 2.175982e-52 | 1.619706e-49 |
| MsG0480018338.01 | MsG0580027276.01 | 0.840780 | 7.075790e-58 | 1.018669e-54 |
| MsG0480018338.01 | MsG0580027761.01 | 0.819707 | 1.008333e-52 | 7.817958e-50 |
| MsG0480018338.01 | MsG0580027785.01 | 0.819048 | 1.425171e-52 | 1.084957e-49 |
| MsG0480018338.01 | MsG0580028422.01 | 0.843863 | 1.078444e-58 | 1.710136e-55 |
| MsG0480018338.01 | MsG0580029158.01 | -0.803163 | 3.974017e-49 | 1.983004e-46 |
| MsG0480018338.01 | MsG0580029172.01 | 0.801538 | 8.588033e-49 | 4.111703e-46 |
| MsG0480018338.01 | MsG0580029511.01 | 0.815246 | 1.019914e-51 | 6.994357e-49 |
| MsG0480018338.01 | MsG0580029751.01 | 0.880554 | 4.987731e-70 | 2.824557e-66 |
| MsG0480018338.01 | MsG0580030014.01 | 0.800557 | 1.362741e-48 | 6.364512e-46 |
| MsG0480018338.01 | MsG0580030063.01 | 0.808694 | 2.730571e-50 | 1.571676e-47 |
| MsG0480018338.01 | MsG0580030141.01 | -0.809871 | 1.527519e-50 | 9.071922e-48 |
| MsG0480018338.01 | MsG0680030902.01 | 0.818878 | 1.557459e-52 | 1.180115e-49 |
| MsG0480018338.01 | MsG0680031204.01 | 0.802685 | 4.989173e-49 | 2.459362e-46 |
| MsG0480018338.01 | MsG0680031449.01 | 0.866301 | 3.150732e-65 | 1.056868e-61 |
| MsG0480018338.01 | MsG0680031713.01 | 0.815286 | 9.991969e-52 | 6.860404e-49 |
| MsG0480018338.01 | MsG0680031826.01 | 0.817068 | 3.993781e-52 | 2.879213e-49 |
| MsG0480018338.01 | MsG0680032160.01 | 0.819812 | 9.542560e-53 | 7.420623e-50 |
| MsG0480018338.01 | MsG0680032191.01 | 0.821073 | 4.901332e-53 | 3.947621e-50 |
| MsG0480018338.01 | MsG0680032245.01 | 0.826884 | 2.123087e-54 | 2.016716e-51 |
| MsG0480018338.01 | MsG0680032416.01 | 0.852020 | 6.071138e-61 | 1.251649e-57 |
| MsG0480018338.01 | MsG0680032769.01 | 0.806168 | 9.378247e-50 | 5.055478e-47 |
| MsG0480018338.01 | MsG0680032850.01 | 0.841776 | 3.869885e-58 | 5.746281e-55 |
| MsG0480018338.01 | MsG0680033643.01 | 0.822166 | 2.739620e-53 | 2.275235e-50 |
| MsG0480018338.01 | MsG0680034238.01 | -0.809919 | 1.491677e-50 | 8.870163e-48 |
| MsG0480018338.01 | MsG0680034383.01 | 0.819757 | 9.822768e-53 | 7.626685e-50 |
| MsG0480018338.01 | MsG0680035532.01 | 0.804073 | 2.573486e-49 | 1.314560e-46 |
| MsG0480018338.01 | MsG0680035664.01 | 0.809366 | 1.960706e-50 | 1.149016e-47 |
| MsG0480018338.01 | MsG0680035665.01 | 0.808755 | 2.649574e-50 | 1.527549e-47 |
| MsG0480018338.01 | MsG0780035976.01 | -0.812823 | 3.491376e-51 | 2.242362e-48 |
| MsG0480018338.01 | MsG0780036008.01 | 0.868855 | 4.785548e-66 | 1.757758e-62 |
| MsG0480018338.01 | MsG0780036613.01 | 0.807133 | 5.865403e-50 | 3.241062e-47 |
| MsG0480018338.01 | MsG0780036620.01 | 0.823021 | 1.733062e-53 | 1.474856e-50 |
| MsG0480018338.01 | MsG0780036846.01 | 0.820357 | 7.160460e-53 | 5.652902e-50 |
| MsG0480018338.01 | MsG0780037351.01 | 0.822466 | 2.334207e-53 | 1.955275e-50 |
| MsG0480018338.01 | MsG0780037363.01 | 0.808348 | 3.237064e-50 | 1.846571e-47 |
| MsG0480018338.01 | MsG0780037507.01 | 0.860564 | 1.891715e-63 | 5.193595e-60 |
| MsG0480018338.01 | MsG0780037999.01 | -0.815717 | 8.012317e-52 | 5.566763e-49 |
| MsG0480018338.01 | MsG0780038848.01 | 0.824754 | 6.800896e-54 | 6.079701e-51 |
| MsG0480018338.01 | MsG0780039161.01 | 0.811248 | 7.696679e-51 | 4.740502e-48 |
| MsG0480018338.01 | MsG0780039234.01 | -0.809415 | 1.914214e-50 | 1.123239e-47 |
| MsG0480018338.01 | MsG0780039287.01 | 0.821292 | 4.362634e-53 | 3.534846e-50 |
| MsG0480018338.01 | MsG0780039805.01 | 0.829496 | 4.981842e-55 | 5.107307e-52 |
| MsG0480018338.01 | MsG0780039902.01 | 0.805580 | 1.246583e-49 | 6.619133e-47 |
| MsG0480018338.01 | MsG0780039955.01 | 0.828474 | 8.812234e-55 | 8.768233e-52 |
| MsG0480018338.01 | MsG0780040154.01 | 0.810372 | 1.190863e-50 | 7.165785e-48 |
| MsG0480018338.01 | MsG0780040155.01 | 0.814853 | 1.246715e-51 | 8.459357e-49 |
| MsG0480018338.01 | MsG0780040214.01 | 0.858010 | 1.104683e-62 | 2.779214e-59 |
| MsG0480018338.01 | MsG0780040236.01 | 0.858145 | 1.006748e-62 | 2.544304e-59 |
| MsG0480018338.01 | MsG0780040560.01 | -0.814829 | 1.262336e-51 | 8.559838e-49 |
| MsG0480018338.01 | MsG0780040640.01 | 0.821275 | 4.402559e-53 | 3.565322e-50 |
| MsG0480018338.01 | MsG0780040670.01 | -0.843477 | 1.367816e-58 | 2.142682e-55 |
| MsG0480018338.01 | MsG0780040684.01 | 0.881893 | 1.643242e-70 | 9.799481e-67 |
| MsG0480018338.01 | MsG0780040685.01 | 0.804466 | 2.131501e-49 | 1.099770e-46 |
| MsG0480018338.01 | MsG0780040716.01 | -0.829731 | 4.369053e-55 | 4.510503e-52 |
| MsG0480018338.01 | MsG0780040889.01 | -0.803151 | 3.996774e-49 | 1.993762e-46 |
| MsG0480018338.01 | MsG0780040892.01 | 0.833669 | 4.670766e-56 | 5.416094e-53 |
| MsG0480018338.01 | MsG0780040965.01 | 0.884988 | 1.196914e-71 | 8.071570e-68 |
| MsG0480018338.01 | MsG0780041129.01 | 0.837167 | 6.099700e-57 | 7.857402e-54 |
| MsG0480018338.01 | MsG0780041331.01 | 0.904445 | 1.217985e-79 | 1.884948e-75 |
| MsG0480018338.01 | MsG0780041361.01 | 0.810898 | 9.169287e-51 | 5.595647e-48 |
| MsG0480018338.01 | MsG0780041385.01 | 0.823974 | 1.037236e-53 | 9.067382e-51 |
| MsG0480018338.01 | MsG0780041403.01 | -0.802264 | 6.093619e-49 | 2.971741e-46 |
| MsG0480018338.01 | MsG0780041442.01 | 0.812439 | 4.236730e-51 | 2.694119e-48 |
| MsG0480018338.01 | MsG0780041443.01 | -0.821932 | 3.104166e-53 | 2.560913e-50 |
| MsG0480018338.01 | MsG0780041474.01 | 0.806481 | 8.057235e-50 | 4.378003e-47 |
| MsG0480018338.01 | MsG0880041847.01 | 0.865472 | 5.762374e-65 | 1.877040e-61 |
| MsG0480018338.01 | MsG0880041908.01 | 0.807391 | 5.172440e-50 | 2.877478e-47 |
| MsG0480018338.01 | MsG0880042002.01 | 0.809241 | 2.085441e-50 | 1.218067e-47 |
| MsG0480018338.01 | MsG0880042086.01 | 0.831757 | 1.392781e-55 | 1.525973e-52 |
| MsG0480018338.01 | MsG0880042278.01 | 0.804643 | 1.957721e-49 | 1.014747e-46 |
| MsG0480018338.01 | MsG0880042415.01 | 0.908089 | 2.500702e-81 | 4.566089e-77 |
| MsG0480018338.01 | MsG0880043056.01 | 0.866756 | 2.259855e-65 | 7.703513e-62 |
| MsG0480018338.01 | MsG0880043107.01 | 0.823073 | 1.685709e-53 | 1.436643e-50 |
| MsG0480018338.01 | MsG0880043301.01 | 0.806243 | 9.040252e-50 | 4.882759e-47 |
| MsG0480018338.01 | MsG0880043463.01 | -0.823141 | 1.625011e-53 | 1.387606e-50 |
| MsG0480018338.01 | MsG0880043476.01 | 0.842313 | 2.791607e-58 | 4.216187e-55 |
| MsG0480018338.01 | MsG0880044317.01 | 0.815580 | 8.595123e-52 | 5.949040e-49 |
| MsG0480018338.01 | MsG0880044318.01 | 0.805158 | 1.528032e-49 | 8.026139e-47 |
| MsG0480018338.01 | MsG0880044712.01 | -0.800173 | 1.631434e-48 | 7.545401e-46 |
| MsG0480018338.01 | MsG0880044834.01 | 0.869098 | 3.992198e-66 | 1.479667e-62 |
| MsG0480018338.01 | MsG0880045031.01 | 0.842991 | 1.843345e-58 | 2.843386e-55 |
| MsG0480018338.01 | MsG0880045312.01 | 0.820340 | 7.222461e-53 | 5.699308e-50 |
| MsG0480018338.01 | MsG0880045423.01 | 0.800680 | 1.286395e-48 | 6.026623e-46 |
| MsG0480018338.01 | MsG0880045648.01 | 0.829363 | 5.369108e-55 | 5.483628e-52 |
| MsG0480018338.01 | MsG0880045703.01 | 0.856282 | 3.574536e-62 | 8.486653e-59 |
| MsG0480018338.01 | MsG0880045927.01 | 0.804766 | 1.845441e-49 | 9.596356e-47 |
| MsG0480018338.01 | MsG0880046010.01 | 0.834260 | 3.321145e-56 | 3.920471e-53 |
| MsG0480018338.01 | MsG0880046051.01 | 0.824253 | 8.923507e-54 | 7.861858e-51 |
| MsG0480018338.01 | MsG0880046080.01 | -0.828933 | 6.824136e-55 | 6.880882e-52 |
| MsG0480018338.01 | MsG0880046124.01 | 0.837276 | 5.719913e-57 | 7.392380e-54 |
| MsG0480018338.01 | MsG0880046324.01 | 0.821695 | 3.522447e-53 | 2.886516e-50 |
| MsG0480018338.01 | MsG0880046759.01 | 0.841428 | 4.781412e-58 | 7.023856e-55 |
| MsG0480018338.01 | MsG0880046876.01 | 0.805501 | 1.294920e-49 | 6.861771e-47 |
| MsG0480018338.01 | MsG0880047207.01 | 0.815181 | 1.054191e-51 | 7.216739e-49 |
| MsG0480018338.01 | MsG0880047312.01 | -0.812643 | 3.824433e-51 | 2.444794e-48 |
| MsG0480018338.01 | MsG0880047326.01 | 0.813587 | 2.373006e-51 | 1.555976e-48 |
| MsG0480018338.01 | MsG0880047540.01 | 0.815601 | 8.503866e-52 | 5.889583e-49 |
| MsG0480018338.01 | MsG0880047578.01 | 0.805169 | 1.519693e-49 | 7.984683e-47 |
| MsG0280007248.01 | MsG0480018338.01 | 0.816678 | 4.886765e-52 | 3.485395e-49 |
| MsG0280007406.01 | MsG0480018338.01 | 0.888983 | 3.635544e-73 | 2.879546e-69 |
| MsG0280007511.01 | MsG0480018338.01 | 0.821581 | 3.742372e-53 | 3.056733e-50 |
| MsG0280007852.01 | MsG0480018338.01 | 0.827917 | 1.200187e-54 | 1.174934e-51 |
| MsG0280007853.01 | MsG0480018338.01 | 0.853761 | 1.929925e-61 | 4.214799e-58 |
| MsG0280008343.01 | MsG0480018338.01 | 0.863835 | 1.874324e-64 | 5.761570e-61 |
| MsG0280009103.01 | MsG0480018338.01 | 0.827748 | 1.318303e-54 | 1.284167e-51 |
| MsG0280009287.01 | MsG0480018338.01 | 0.801592 | 8.373374e-49 | 4.014232e-46 |
| MsG0280009445.01 | MsG0480018338.01 | 0.822353 | 2.478748e-53 | 2.069779e-50 |
| MsG0280009675.01 | MsG0480018338.01 | 0.822252 | 2.616135e-53 | 2.178120e-50 |
| MsG0280010356.01 | MsG0480018338.01 | 0.810106 | 1.359015e-50 | 8.121246e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018338.01.T01 | MTR_4g010140 | 78.723 | 94 | 6 | 1 | 1 | 94 | 50 | 129 | 8.25e-40 | 131 |
| MsG0480018338.01.T01 | MTR_4g010140 | 78.723 | 94 | 6 | 1 | 1 | 94 | 50 | 129 | 2.36e-39 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018338.01.T01 | AT3G15840 | 57.647 | 85 | 22 | 1 | 10 | 94 | 28 | 98 | 2.67e-27 | 100 |
| MsG0480018338.01.T01 | AT3G15840 | 74.138 | 58 | 15 | 0 | 37 | 94 | 7 | 64 | 4.37e-27 | 99.0 |
| MsG0480018338.01.T01 | AT3G15840 | 57.647 | 85 | 22 | 1 | 10 | 94 | 48 | 118 | 4.50e-27 | 100 |
| MsG0480018338.01.T01 | AT3G15840 | 57.647 | 85 | 22 | 1 | 10 | 94 | 48 | 118 | 4.75e-27 | 100 |
| MsG0480018338.01.T01 | AT3G15840 | 54.118 | 85 | 22 | 2 | 10 | 94 | 48 | 115 | 1.02e-22 | 88.6 |
Find 36 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAATATTGGATTGAAATA+AGG | 0.213857 | 4:+3509411 | None:intergenic |
| CTTGCTCCTAGTGAAGAATT+TGG | 0.251751 | 4:-3507793 | MsG0480018338.01.T01:CDS |
| CTTATTTCAATCCAATATTA+AGG | 0.264128 | 4:-3509410 | MsG0480018338.01.T01:five_prime_UTR |
| TATATCCTATGAATGTTTAT+AGG | 0.297576 | 4:-3508022 | MsG0480018338.01.T01:CDS |
| ATAAACATTCATAGGATATA+TGG | 0.352487 | 4:+3508025 | None:intergenic |
| TAAATAGAAGAGAGAAAGAT+TGG | 0.387202 | 4:+3509442 | None:intergenic |
| ACCAAGATGTTACCCTTTGA+AGG | 0.390463 | 4:-3508586 | MsG0480018338.01.T01:five_prime_UTR |
| TTCATACTCTTGAATTTCTT+CGG | 0.394407 | 4:+3508503 | None:intergenic |
| TTGGGAAGGCTGCTGTCTAC+TGG | 0.402887 | 4:-3507968 | MsG0480018338.01.T01:CDS |
| ATAGGTACAAGCTTCCTTCA+TGG | 0.408186 | 4:-3508004 | MsG0480018338.01.T01:CDS |
| TCCTTCAAAGGGTAACATCT+TGG | 0.415937 | 4:+3508585 | None:intergenic |
| TTCATATGTCTTTCCTTCAA+AGG | 0.436295 | 4:+3508573 | None:intergenic |
| TCATGGGCTATGTTTGAACT+TGG | 0.438144 | 4:-3507987 | MsG0480018338.01.T01:CDS |
| TCATATGTCTTTCCTTCAAA+GGG | 0.449365 | 4:+3508574 | None:intergenic |
| TTGTACCTATAAACATTCAT+AGG | 0.453901 | 4:+3508017 | None:intergenic |
| TAGGTACAAGCTTCCTTCAT+GGG | 0.479108 | 4:-3508003 | MsG0480018338.01.T01:CDS |
| GGAGCAAGTTGAGCTGCAGC+TGG | 0.485205 | 4:+3507808 | None:intergenic |
| CATAGCATAACAAACACGTT+TGG | 0.489492 | 4:-3509293 | MsG0480018338.01.T01:intron |
| AATATCATACTTACTGAAGT+AGG | 0.495204 | 4:+3507924 | None:intergenic |
| GCGATTCCAAATTCTTCACT+AGG | 0.503363 | 4:+3507787 | None:intergenic |
| GGCTATGTTTGAACTTGGGA+AGG | 0.522989 | 4:-3507982 | MsG0480018338.01.T01:CDS |
| TACTCTTGAATTTCTTCGGT+AGG | 0.541328 | 4:+3508507 | None:intergenic |
| CATGGGCTATGTTTGAACTT+GGG | 0.542521 | 4:-3507986 | MsG0480018338.01.T01:CDS |
| AGTAGGAGCAACACCATTGG+TGG | 0.543782 | 4:+3507941 | None:intergenic |
| TTGTGACAGAGAAGCAAGGT+TGG | 0.548794 | 4:+3509327 | None:intergenic |
| TGAAGTCAGTGCTGCTGCTG+CGG | 0.560072 | 4:-3508541 | MsG0480018338.01.T01:CDS |
| TGTGACAGAGAAGCAAGGTT+GGG | 0.560846 | 4:+3509328 | None:intergenic |
| ACATTCATAGGATATATGGC+AGG | 0.565650 | 4:+3508029 | None:intergenic |
| AGTTCAAACATAGCCCATGA+AGG | 0.591842 | 4:+3507990 | None:intergenic |
| GACAGAGAAGCAAGGTTGGG+TGG | 0.594710 | 4:+3509331 | None:intergenic |
| CATTCATAGGATATATGGCA+GGG | 0.600651 | 4:+3508030 | None:intergenic |
| TGAAGTAGGAGCAACACCAT+TGG | 0.613214 | 4:+3507938 | None:intergenic |
| ATAGAAGAGAGAAAGATTGG+TGG | 0.623074 | 4:+3509445 | None:intergenic |
| GTCTACTGGAAAACCACCAA+TGG | 0.649539 | 4:-3507954 | MsG0480018338.01.T01:CDS |
| TGTTATGCTATGACTACGAG+AGG | 0.652151 | 4:+3509304 | None:intergenic |
| GAGGTTGTGACAGAGAAGCA+AGG | 0.671049 | 4:+3509323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTATTTATTTTTTAATAG+TGG | - | Chr4:3508035-3508054 | MsG0480018338.01.T01:CDS | 10.0% |
| !! | TAGAAATACAGAAAATATAA+AGG | - | Chr4:3508992-3509011 | MsG0480018338.01.T01:intron | 15.0% |
| !!! | ATTTATTTTTTAATAGTGGA+CGG | - | Chr4:3508039-3508058 | MsG0480018338.01.T01:CDS | 15.0% |
| !!! | GTTATTCTTTTAAACTTATT+GGG | - | Chr4:3508253-3508272 | MsG0480018338.01.T01:intron | 15.0% |
| !! | ACTCAAAAATGAAAAGAAAA+AGG | + | Chr4:3507970-3507989 | None:intergenic | 20.0% |
| !! | ATAAACATTCATAGGATATA+TGG | + | Chr4:3509206-3509225 | None:intergenic | 20.0% |
| !! | CTCAAAAATGAAAAGAAAAA+GGG | + | Chr4:3507969-3507988 | None:intergenic | 20.0% |
| !! | CTTAATATTGGATTGAAATA+AGG | + | Chr4:3507820-3507839 | None:intergenic | 20.0% |
| !! | CTTATTTCAATCCAATATTA+AGG | - | Chr4:3507818-3507837 | MsG0480018338.01.T01:CDS | 20.0% |
| !! | TATATCCTATGAATGTTTAT+AGG | - | Chr4:3509206-3509225 | MsG0480018338.01.T01:intron | 20.0% |
| !! | TCATATAATAAAGTTCTTAG+TGG | + | Chr4:3508190-3508209 | None:intergenic | 20.0% |
| !!! | AAAGAATAACCATTTTCTTT+TGG | + | Chr4:3508243-3508262 | None:intergenic | 20.0% |
| !!! | ATTTTTTTATAAACTTTGGC+AGG | - | Chr4:3509371-3509390 | MsG0480018338.01.T01:intron | 20.0% |
| !!! | GGTTATTCTTTTAAACTTAT+TGG | - | Chr4:3508252-3508271 | MsG0480018338.01.T01:intron | 20.0% |
| !!! | TATAGTATTTTGATGAAGTT+AGG | - | Chr4:3509131-3509150 | MsG0480018338.01.T01:intron | 20.0% |
| !!! | TATTCAAACATTTTTTAACC+AGG | + | Chr4:3508492-3508511 | None:intergenic | 20.0% |
| !!! | TCGTAATTCTTTTGATTAAA+GGG | - | Chr4:3508217-3508236 | MsG0480018338.01.T01:intron | 20.0% |
| !!! | TTCGTAATTCTTTTGATTAA+AGG | - | Chr4:3508216-3508235 | MsG0480018338.01.T01:intron | 20.0% |
| !!! | TTTGTTCATGTCTTTATTTA+TGG | + | Chr4:3509058-3509077 | None:intergenic | 20.0% |
| !!! | TTTTTTTATAAACTTTGGCA+GGG | - | Chr4:3509372-3509391 | MsG0480018338.01.T01:intron | 20.0% |
| ! | AAAAAAAAAACGTGGTTGAA+AGG | - | Chr4:3508404-3508423 | MsG0480018338.01.T01:intron | 25.0% |
| ! | AATATCATACTTACTGAAGT+AGG | + | Chr4:3509307-3509326 | None:intergenic | 25.0% |
| ! | ATCAATTCAATGATAGACTT+GGG | + | Chr4:3508120-3508139 | None:intergenic | 25.0% |
| ! | CAAATAATTAGACAGTAAAC+TGG | - | Chr4:3508936-3508955 | MsG0480018338.01.T01:intron | 25.0% |
| ! | CAATGGAGAAAAGTTAATAT+AGG | - | Chr4:3508776-3508795 | MsG0480018338.01.T01:intron | 25.0% |
| ! | GAAAGGATAAATCATACTTA+AGG | - | Chr4:3508421-3508440 | MsG0480018338.01.T01:intron | 25.0% |
| ! | TAAATAGAAGAGAGAAAGAT+TGG | + | Chr4:3507789-3507808 | None:intergenic | 25.0% |
| ! | TATCAATTCAATGATAGACT+TGG | + | Chr4:3508121-3508140 | None:intergenic | 25.0% |
| ! | TGTAGATGAAAAAAAAAACG+TGG | - | Chr4:3508396-3508415 | MsG0480018338.01.T01:intron | 25.0% |
| ! | TTACTGTCTAATTATTTGAG+TGG | + | Chr4:3508934-3508953 | None:intergenic | 25.0% |
| ! | TTCATACTCTTGAATTTCTT+CGG | + | Chr4:3508728-3508747 | None:intergenic | 25.0% |
| ! | TTGTACCTATAAACATTCAT+AGG | + | Chr4:3509214-3509233 | None:intergenic | 25.0% |
| !! | AATATCAGAGTCTAGTTTAA+TGG | + | Chr4:3508350-3508369 | None:intergenic | 25.0% |
| !! | ATTTGATTATTTGTTGACTG+AGG | - | Chr4:3508074-3508093 | MsG0480018338.01.T01:intron | 25.0% |
| !!! | GTTTTAAAAACTGACTCAAA+CGG | + | Chr4:3508967-3508986 | None:intergenic | 25.0% |
| !!! | TGATATTTTAAGCAAAGTCT+CGG | - | Chr4:3508363-3508382 | MsG0480018338.01.T01:intron | 25.0% |
| !!! | TTTTTTTTCATCTACAAAGC+TGG | + | Chr4:3508392-3508411 | None:intergenic | 25.0% |
| AATCCAACATTGGTATTAAG+TGG | + | Chr4:3508754-3508773 | None:intergenic | 30.0% | |
| ACTGAAAACTAATCCTCATT+TGG | + | Chr4:3508461-3508480 | None:intergenic | 30.0% | |
| AGGATAAATCATACTTAAGG+TGG | - | Chr4:3508424-3508443 | MsG0480018338.01.T01:intron | 30.0% | |
| ATCCAACATTGGTATTAAGT+GGG | + | Chr4:3508753-3508772 | None:intergenic | 30.0% | |
| ATTAAAGGGCCAAAAGAAAA+TGG | - | Chr4:3508231-3508250 | MsG0480018338.01.T01:intron | 30.0% | |
| TACCAATGTTGGATTTACAA+TGG | - | Chr4:3508759-3508778 | MsG0480018338.01.T01:intron | 30.0% | |
| TCATATGTCTTTCCTTCAAA+GGG | + | Chr4:3508657-3508676 | None:intergenic | 30.0% | |
| TTCATATGTCTTTCCTTCAA+AGG | + | Chr4:3508658-3508677 | None:intergenic | 30.0% | |
| ! | AGTTTTCAGTTAAGTAAACC+TGG | - | Chr4:3508471-3508490 | MsG0480018338.01.T01:intron | 30.0% |
| ! | GTTCATGTCTTTATTTATGG+TGG | + | Chr4:3509055-3509074 | None:intergenic | 30.0% |
| !! | GAATTTGGAATCGCTTTTAA+TGG | - | Chr4:3509450-3509469 | MsG0480018338.01.T01:five_prime_UTR | 30.0% |
| !! | TTTTGGTGACTCCTTAATAT+TGG | + | Chr4:3507832-3507851 | None:intergenic | 30.0% |
| !!! | CAGTGTTTTGAAAACTGAAA+TGG | - | Chr4:3508832-3508851 | MsG0480018338.01.T01:intron | 30.0% |
| ACATTCATAGGATATATGGC+AGG | + | Chr4:3509202-3509221 | None:intergenic | 35.0% | |
| ATAGAAGAGAGAAAGATTGG+TGG | + | Chr4:3507786-3507805 | None:intergenic | 35.0% | |
| CATAGCATAACAAACACGTT+TGG | - | Chr4:3507935-3507954 | MsG0480018338.01.T01:intron | 35.0% | |
| CATTCATAGGATATATGGCA+GGG | + | Chr4:3509201-3509220 | None:intergenic | 35.0% | |
| CTCCATTGTAAATCCAACAT+TGG | + | Chr4:3508764-3508783 | None:intergenic | 35.0% | |
| TACTCTTGAATTTCTTCGGT+AGG | + | Chr4:3508724-3508743 | None:intergenic | 35.0% | |
| TTCCCACTTAATACCAATGT+TGG | - | Chr4:3508748-3508767 | MsG0480018338.01.T01:intron | 35.0% | |
| TTTAAATCACTCGAGCAAAG+AGG | - | Chr4:3508895-3508914 | MsG0480018338.01.T01:intron | 35.0% | |
| ! | CACCAAAAAAGTGTGATACA+TGG | - | Chr4:3507844-3507863 | MsG0480018338.01.T01:intron | 35.0% |
| !!! | AGCCATGTATCACACTTTTT+TGG | + | Chr4:3507849-3507868 | None:intergenic | 35.0% |
| ACCAAGATGTTACCCTTTGA+AGG | - | Chr4:3508642-3508661 | MsG0480018338.01.T01:intron | 40.0% | |
| AGTTCAAACATAGCCCATGA+AGG | + | Chr4:3509241-3509260 | None:intergenic | 40.0% | |
| ATAGGTACAAGCTTCCTTCA+TGG | - | Chr4:3509224-3509243 | MsG0480018338.01.T01:intron | 40.0% | |
| CACATGACCAATTGCAAAGA+TGG | + | Chr4:3507996-3508015 | None:intergenic | 40.0% | |
| CACTTCATAGTTTCTGATGC+AGG | - | Chr4:3508595-3508614 | MsG0480018338.01.T01:five_prime_UTR | 40.0% | |
| CATCTTTGCAATTGGTCATG+TGG | - | Chr4:3507994-3508013 | MsG0480018338.01.T01:CDS | 40.0% | |
| CTTGCTCCTAGTGAAGAATT+TGG | - | Chr4:3509435-3509454 | MsG0480018338.01.T01:five_prime_UTR | 40.0% | |
| GCGATTCCAAATTCTTCACT+AGG | + | Chr4:3509444-3509463 | None:intergenic | 40.0% | |
| GTCATTGAACCATGACTAGA+AGG | + | Chr4:3508875-3508894 | None:intergenic | 40.0% | |
| TAGGTACAAGCTTCCTTCAT+GGG | - | Chr4:3509225-3509244 | MsG0480018338.01.T01:intron | 40.0% | |
| TCCTTCAAAGGGTAACATCT+TGG | + | Chr4:3508646-3508665 | None:intergenic | 40.0% | |
| TGTTATGCTATGACTACGAG+AGG | + | Chr4:3507927-3507946 | None:intergenic | 40.0% | |
| ! | CATGGGCTATGTTTGAACTT+GGG | - | Chr4:3509242-3509261 | MsG0480018338.01.T01:intron | 40.0% |
| ! | GCAATTGGTCATGTGGATTA+TGG | - | Chr4:3508001-3508020 | MsG0480018338.01.T01:CDS | 40.0% |
| ! | TCATGGGCTATGTTTGAACT+TGG | - | Chr4:3509241-3509260 | MsG0480018338.01.T01:intron | 40.0% |
| CATACTTAAGGTGGTCAACG+AGG | - | Chr4:3508433-3508452 | MsG0480018338.01.T01:intron | 45.0% | |
| GAACCATGACTAGAAGGTCT+TGG | + | Chr4:3508869-3508888 | None:intergenic | 45.0% | |
| GAGTGCACCATCTTTGCAAT+TGG | - | Chr4:3507986-3508005 | MsG0480018338.01.T01:CDS | 45.0% | |
| GGCTATGTTTGAACTTGGGA+AGG | - | Chr4:3509246-3509265 | MsG0480018338.01.T01:intron | 45.0% | |
| GTCTACTGGAAAACCACCAA+TGG | - | Chr4:3509274-3509293 | MsG0480018338.01.T01:intron | 45.0% | |
| TGAAGTAGGAGCAACACCAT+TGG | + | Chr4:3509293-3509312 | None:intergenic | 45.0% | |
| TGTGACAGAGAAGCAAGGTT+GGG | + | Chr4:3507903-3507922 | None:intergenic | 45.0% | |
| TTGTGACAGAGAAGCAAGGT+TGG | + | Chr4:3507904-3507923 | None:intergenic | 45.0% | |
| !!! | TAATATTTTTTTATAAACTT+TGG | - | Chr4:3509367-3509386 | MsG0480018338.01.T01:intron | 5.0% |
| AGTAGGAGCAACACCATTGG+TGG | + | Chr4:3509290-3509309 | None:intergenic | 50.0% | |
| GAGGTTGTGACAGAGAAGCA+AGG | + | Chr4:3507908-3507927 | None:intergenic | 50.0% | |
| GGTCAACGAGGTTCCAAATG+AGG | - | Chr4:3508445-3508464 | MsG0480018338.01.T01:intron | 50.0% | |
| TCGCCAAGACCTTCTAGTCA+TGG | - | Chr4:3508863-3508882 | MsG0480018338.01.T01:intron | 50.0% | |
| GACAGAGAAGCAAGGTTGGG+TGG | + | Chr4:3507900-3507919 | None:intergenic | 55.0% | |
| TTGGGAAGGCTGCTGTCTAC+TGG | - | Chr4:3509260-3509279 | MsG0480018338.01.T01:intron | 55.0% | |
| ! | TGAAGTCAGTGCTGCTGCTG+CGG | - | Chr4:3508687-3508706 | MsG0480018338.01.T01:intron | 55.0% |
| ! | GGAGCAAGTTGAGCTGCAGC+TGG | + | Chr4:3509423-3509442 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 3507756 | 3509494 | 3507756 | ID=MsG0480018338.01;Name=MsG0480018338.01 |
| Chr4 | mRNA | 3507756 | 3509494 | 3507756 | ID=MsG0480018338.01.T01;Parent=MsG0480018338.01;Name=MsG0480018338.01.T01;_AED=0.46;_eAED=0.51;_QI=234|0.75|0.6|1|0.5|0.4|5|0|98 |
| Chr4 | exon | 3507756 | 3507857 | 3507756 | ID=MsG0480018338.01.T01:exon:1013;Parent=MsG0480018338.01.T01 |
| Chr4 | exon | 3507938 | 3508064 | 3507938 | ID=MsG0480018338.01.T01:exon:1012;Parent=MsG0480018338.01.T01 |
| Chr4 | exon | 3508510 | 3508633 | 3508510 | ID=MsG0480018338.01.T01:exon:1011;Parent=MsG0480018338.01.T01 |
| Chr4 | exon | 3509294 | 3509377 | 3509294 | ID=MsG0480018338.01.T01:exon:1010;Parent=MsG0480018338.01.T01 |
| Chr4 | exon | 3509401 | 3509494 | 3509401 | ID=MsG0480018338.01.T01:exon:1009;Parent=MsG0480018338.01.T01 |
| Chr4 | five_prime_UTR | 3509401 | 3509494 | 3509401 | ID=MsG0480018338.01.T01:five_prime_utr;Parent=MsG0480018338.01.T01 |
| Chr4 | five_prime_UTR | 3509294 | 3509377 | 3509294 | ID=MsG0480018338.01.T01:five_prime_utr;Parent=MsG0480018338.01.T01 |
| Chr4 | five_prime_UTR | 3508578 | 3508633 | 3508578 | ID=MsG0480018338.01.T01:five_prime_utr;Parent=MsG0480018338.01.T01 |
| Chr4 | CDS | 3508510 | 3508577 | 3508510 | ID=MsG0480018338.01.T01:cds;Parent=MsG0480018338.01.T01 |
| Chr4 | CDS | 3507938 | 3508064 | 3507938 | ID=MsG0480018338.01.T01:cds;Parent=MsG0480018338.01.T01 |
| Chr4 | CDS | 3507756 | 3507857 | 3507756 | ID=MsG0480018338.01.T01:cds;Parent=MsG0480018338.01.T01 |
| Gene Sequence |
| Protein sequence |
