AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018627.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018627.01.T01 MTR_4g015550 80.422 521 35 4 1 455 1 520 0.0 810
MsG0480018627.01.T01 MTR_4g015550 78.836 378 25 3 1 324 1 377 0.0 575
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018627.01.T01 AT5G01260 31.773 406 221 12 2 385 6 377 6.91e-50 174
MsG0480018627.01.T01 AT5G01260 34.675 323 173 8 2 310 6 304 1.57e-47 166
MsG0480018627.01.T01 AT5G01260 34.494 316 169 8 2 303 6 297 8.15e-47 164

Find 103 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGTTTCTAACAAAATT+TGG 0.138936 4:+7753330 MsG0480018627.01.T01:CDS
ATGATCCTAAACTTGGTTTA+TGG 0.208760 4:+7747374 MsG0480018627.01.T01:CDS
CTCCTAGTGGTTCTGTAAAA+AGG 0.210407 4:-7753368 None:intergenic
GAAAAGAAGGTGATATTATT+TGG 0.215755 4:+7750915 MsG0480018627.01.T01:CDS
TTGTATTATTCTTTCAGTTT+TGG 0.258568 4:+7753585 MsG0480018627.01.T01:three_prime_UTR
TGTTCATAGTTTCCCATGTT+TGG 0.263305 4:-7750961 None:intergenic
CTATACAAGTTTATACTAAA+AGG 0.304970 4:+7750893 MsG0480018627.01.T01:CDS
TTAGATTCTTCTTCCATTGT+TGG 0.308755 4:-7753246 None:intergenic
CGCAAGGCATTACCATGAAT+TGG 0.309591 4:-7752602 None:intergenic
CGCAAGGCATTACCATGAAT+TGG 0.309591 4:-7753276 None:intergenic
CTACTAAAAGATTGCGACTT+TGG 0.316881 4:+7747328 MsG0480018627.01.T01:CDS
GGAGAACAGTTTCTAATAGT+TGG 0.352666 4:+7747349 MsG0480018627.01.T01:CDS
AATAATTGTTCTTGAGGATT+GGG 0.356549 4:+7750985 MsG0480018627.01.T01:CDS
GGGTTCCATAAACCAAGTTT+AGG 0.360824 4:-7747379 None:intergenic
GCTATGTTTGCCGAAAATAT+AGG 0.378453 4:+7751094 MsG0480018627.01.T01:CDS
AGAACCGGAGGTTCTTCATT+TGG 0.386077 4:-7751055 None:intergenic
AACATAGCCATTGGCTTCTC+TGG 0.387237 4:-7751079 None:intergenic
GATCCTAGCTTATGAACTAT+AGG 0.387560 4:-7746197 None:intergenic
GCATGAAGAACAGTTTCATT+TGG 0.387821 4:+7752547 MsG0480018627.01.T01:CDS
CATGGTCTGATGGTCATATA+TGG 0.388044 4:+7747422 MsG0480018627.01.T01:CDS
TAAATTACATAGATTGTGTA+TGG 0.388589 4:+7753628 MsG0480018627.01.T01:three_prime_UTR
AGGTGATATTATTTGGCAAC+CGG 0.392152 4:+7750922 MsG0480018627.01.T01:CDS
ACATGAAGAGCAGTTTCATT+TGG 0.393105 4:+7753221 MsG0480018627.01.T01:CDS
GGAAAGAGTGAAACAAGAAA+AGG 0.394035 4:-7746258 None:intergenic
GAATAATTGTTCTTGAGGAT+TGG 0.398780 4:+7750984 MsG0480018627.01.T01:CDS
AGACACAACACAATGATGTT+TGG 0.412139 4:-7746100 None:intergenic
TGCAGTGCCATCTGAACAAC+AGG 0.413359 4:+7746355 MsG0480018627.01.T01:CDS
GTCAATGGTAATGCATCTAA+AGG 0.413839 4:-7747400 None:intergenic
TATTATGCTGTCTTGTTACA+TGG 0.423619 4:+7753561 MsG0480018627.01.T01:three_prime_UTR
TCTAACTCAGAGCCAATTCA+TGG 0.434464 4:+7753264 MsG0480018627.01.T01:CDS
GGAGGTCCTGTTCTTGTACC+TGG 0.437575 4:+7751274 MsG0480018627.01.T01:CDS
GAAAGAGTGAAACAAGAAAA+GGG 0.442955 4:-7746257 None:intergenic
AGCTCTTATCCATCTTTCCC+AGG 0.460639 4:-7753460 None:intergenic
GTTGGAGATGATCCTAAACT+TGG 0.469158 4:+7747367 MsG0480018627.01.T01:CDS
TTCTGATCCTGAGTTTCAAA+AGG 0.469360 4:-7751379 None:intergenic
ATTAAGCCAGGTACAAGAAC+AGG 0.470486 4:-7751280 None:intergenic
ATTGGCTTCTCTGGTAGAAC+CGG 0.470881 4:-7751070 None:intergenic
TCTTCTTCAACAACTTCACT+TGG 0.473052 4:-7751328 None:intergenic
TAAGAGCTCAAAGTGTTTCA+TGG 0.475434 4:+7753475 MsG0480018627.01.T01:three_prime_UTR
CTTAGAACTAAAACTTGTGA+AGG 0.476857 4:-7746174 None:intergenic
CTTGCGAAATGACATCGAAT+GGG 0.481388 4:+7753293 MsG0480018627.01.T01:CDS
GAACAGAATAATTGTTCTTG+AGG 0.486338 4:+7750979 MsG0480018627.01.T01:CDS
TCAAACTCAGAGCCAATTCA+TGG 0.486763 4:+7752590 MsG0480018627.01.T01:CDS
CCTTGCGAAATGACATCGAA+TGG 0.498463 4:+7753292 MsG0480018627.01.T01:CDS
GAAACTTCTTTACCGTTTCG+CGG 0.499901 4:-7753317 None:intergenic
TACTTATACTAAAAGATAAG+TGG 0.503238 4:-7753653 None:intergenic
CATCGAATGGGGCCGCGAAA+CGG 0.503895 4:+7753305 MsG0480018627.01.T01:CDS
TTTATACTAAAAGGAAAAGA+AGG 0.503898 4:+7750902 MsG0480018627.01.T01:CDS
CTTGAAACATGTACAAAACA+AGG 0.506329 4:+7746316 MsG0480018627.01.T01:CDS
TCAATGGTAATGCATCTAAA+GGG 0.510357 4:-7747399 None:intergenic
TGCCGAAAATATAGGTTCCT+CGG 0.514374 4:+7751102 MsG0480018627.01.T01:CDS
CATCCAGTGGGGCTTCAAAA+CGG 0.527421 4:+7752631 MsG0480018627.01.T01:CDS
ATCATGTGTTCAGGATATGC+CGG 0.530791 4:+7750856 MsG0480018627.01.T01:intron
GTACTTGTACTTATCTCTTG+TGG 0.532139 4:-7753174 None:intergenic
TTGGCATCAACAATGGAAGA+AGG 0.534614 4:+7752566 MsG0480018627.01.T01:CDS
TCAACCAAATGAAGAACCTC+CGG 0.536881 4:+7751051 MsG0480018627.01.T01:CDS
TATTATTTGGCAACCGGGGT+CGG 0.540226 4:+7750928 MsG0480018627.01.T01:CDS
TCAGTCAACGGTATTAAGCC+AGG 0.540479 4:-7751292 None:intergenic
AAATAAACCTGTTGTTCAGA+TGG 0.543697 4:-7746362 None:intergenic
TGTTCGCTTTGTTGAACTTG+AGG 0.544102 4:-7747176 None:intergenic
CGGATCGAGTAATCCAAACA+TGG 0.544820 4:+7750948 MsG0480018627.01.T01:CDS
CAGATGGCACTGCATGCAAA+GGG 0.546614 4:-7746346 None:intergenic
AGAACTTCAGAAAATAATAG+AGG 0.549395 4:+7751015 MsG0480018627.01.T01:CDS
CCATTCGATGTCATTTCGCA+AGG 0.550670 4:-7753292 None:intergenic
AAGCCTATAGTTCATAAGCT+AGG 0.553146 4:+7746194 MsG0480018627.01.T01:CDS
GTTTCAAAAGGTTCAACTGA+TGG 0.554167 4:-7751367 None:intergenic
AAGAGTGAAGAATCTGAAGA+TGG 0.555921 4:+7751178 MsG0480018627.01.T01:CDS
TGGATTACTCGATCCGACCC+CGG 0.556713 4:-7750941 None:intergenic
TGACCATCAGACCATGTCAA+TGG 0.564403 4:-7747415 None:intergenic
TGTGTTCAGGATATGCCGGC+TGG 0.568099 4:+7750860 MsG0480018627.01.T01:intron
GTTTCATTTGGCATCAACAA+TGG 0.568666 4:+7752559 MsG0480018627.01.T01:CDS
TCAGATGGCACTGCATGCAA+AGG 0.568931 4:-7746347 None:intergenic
GGCTTCTCTGGTAGAACCGG+AGG 0.575456 4:-7751067 None:intergenic
TCATATATGGACTGTTGAGC+TGG 0.575955 4:+7747435 MsG0480018627.01.T01:CDS
GTTTCATTTGGCACCAACAA+TGG 0.578517 4:+7753233 MsG0480018627.01.T01:CDS
AATGAAGAACTTTCTCCTAG+TGG 0.580536 4:-7753381 None:intergenic
AGTGTTTCATGGTGATGCAT+TGG 0.589715 4:+7753486 MsG0480018627.01.T01:three_prime_UTR
CCAGCTTCTTCTTCAGTCAA+CGG 0.590556 4:-7751304 None:intergenic
CCACTGGATGTCATTTCGCA+AGG 0.596297 4:-7752618 None:intergenic
TGGCATCAACAATGGAAGAA+GGG 0.602203 4:+7752567 MsG0480018627.01.T01:CDS
TAGATGCATTACCATTGACA+TGG 0.613812 4:+7747404 MsG0480018627.01.T01:CDS
CCTTGCGAAATGACATCCAG+TGG 0.615325 4:+7752618 MsG0480018627.01.T01:CDS
GGTGATATTATTTGGCAACC+GGG 0.626598 4:+7750923 MsG0480018627.01.T01:CDS
TGAGAATGTTCAGTTGAGCA+AGG 0.626997 4:+7753128 MsG0480018627.01.T01:intron
TGAAAATGCTCAGTTAAGCA+AGG 0.630052 4:+7752460 MsG0480018627.01.T01:intron
ACTTCAGAAAATAATAGAGG+AGG 0.634094 4:+7751018 MsG0480018627.01.T01:CDS
TTACCATTGACATGGTCTGA+TGG 0.637869 4:+7747412 MsG0480018627.01.T01:CDS
CTTGCGAAATGACATCCAGT+GGG 0.638788 4:+7752619 MsG0480018627.01.T01:CDS
TTCAACTGATGGCTCTACCA+TGG 0.639860 4:-7751356 None:intergenic
GAAACATGAAAAGCAACACT+AGG 0.641404 4:-7746227 None:intergenic
TACAAGTACTACAATCAATG+AGG 0.642131 4:+7753188 MsG0480018627.01.T01:CDS
TTGCGAAATGACATCGAATG+GGG 0.646134 4:+7753294 MsG0480018627.01.T01:CDS
TTGAAACATGTACAAAACAA+GGG 0.648807 4:+7746317 MsG0480018627.01.T01:CDS
GGTTCTACCAGAGAAGCCAA+TGG 0.652910 4:+7751072 MsG0480018627.01.T01:CDS
CCGTTGACTGAAGAAGAAGC+TGG 0.654789 4:+7751304 MsG0480018627.01.T01:CDS
GTGATATTATTTGGCAACCG+GGG 0.662994 4:+7750924 MsG0480018627.01.T01:CDS
GGATCGAGTAATCCAAACAT+GGG 0.665164 4:+7750949 MsG0480018627.01.T01:CDS
ACTTTCTGTGAGATCCTCCG+AGG 0.674643 4:-7751119 None:intergenic
TGTTGAAGAAGAAAAGACCA+TGG 0.699218 4:+7751339 MsG0480018627.01.T01:CDS
CGAAAATATAGGTTCCTCGG+AGG 0.707768 4:+7751105 MsG0480018627.01.T01:CDS
TCAGGATCAGAATATACCAG+AGG 0.719056 4:+7751390 MsG0480018627.01.T01:CDS
TTGCGAAATGACATCCAGTG+GGG 0.750769 4:+7752620 MsG0480018627.01.T01:CDS
TTAGTAGCTGAAACTCAACA+CGG 0.751100 4:-7747312 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTGAATTTGATAAAT+GGG + Chr4:7746417-7746436 MsG0480018627.01.T01:intron 10.0%
!! AAAAACAAAAGTTTCTTAAA+AGG - Chr4:7746689-7746708 None:intergenic 15.0%
!! AAAACAAAAGTTTCTTAAAA+GGG - Chr4:7746688-7746707 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + Chr4:7748630-7748649 MsG0480018627.01.T01:intron 15.0%
!! ACATATGAGTAAAAATTAAT+TGG + Chr4:7746839-7746858 MsG0480018627.01.T01:intron 15.0%
!! ATAAAATGAGAAAATTTGTA+TGG - Chr4:7752204-7752223 None:intergenic 15.0%
!! ATTAATGATAACAATCAATT+TGG - Chr4:7751671-7751690 None:intergenic 15.0%
!! GATTGTTATATATACATTAA+GGG + Chr4:7746908-7746927 MsG0480018627.01.T01:intron 15.0%
!! TCTTAATTTCAAAGATTTAA+CGG - Chr4:7747707-7747726 None:intergenic 15.0%
!! TGATTGTTATATATACATTA+AGG + Chr4:7746907-7746926 MsG0480018627.01.T01:intron 15.0%
!!! AACACACAAATTAAAATTTT+AGG - Chr4:7747270-7747289 None:intergenic 15.0%
!!! ACACACAAATTAAAATTTTA+GGG - Chr4:7747269-7747288 None:intergenic 15.0%
!!! CTTTATTTGAATTTGATAAA+TGG + Chr4:7746416-7746435 MsG0480018627.01.T01:intron 15.0%
!!! GATTTTAATGTTATACTTTT+TGG + Chr4:7746592-7746611 MsG0480018627.01.T01:intron 15.0%
!!! TCATTGCTTTAAATAATTAA+TGG - Chr4:7753019-7753038 None:intergenic 15.0%
!!! TGTTTTTGATTTTTTGTTTT+TGG + Chr4:7746702-7746721 MsG0480018627.01.T01:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - Chr4:7748631-7748650 None:intergenic 15.0%
!!! TTGCACATTTTTTTAATATA+TGG + Chr4:7752371-7752390 MsG0480018627.01.T01:intron 15.0%
!! AAAAGAGAATAACTTCAAAT+AGG - Chr4:7746748-7746767 None:intergenic 20.0%
!! AAGAAGTTTCTAACAAAATT+TGG + Chr4:7753330-7753349 MsG0480018627.01.T01:CDS 20.0%
!! AAGAGTTCTTGTAAATAAAA+CGG - Chr4:7752888-7752907 None:intergenic 20.0%
!! AATAACTTCAAATAGGAAAA+AGG - Chr4:7746741-7746760 None:intergenic 20.0%
!! ATAACTTCAAATAGGAAAAA+GGG - Chr4:7746740-7746759 None:intergenic 20.0%
!! CAAATCATTAAGATATTGTT+TGG + Chr4:7747473-7747492 MsG0480018627.01.T01:intron 20.0%
!! CAGCGTTAAAAAATAAAAAA+GGG + Chr4:7751218-7751237 MsG0480018627.01.T01:CDS 20.0%
!! CTATACAAGTTTATACTAAA+AGG + Chr4:7750893-7750912 MsG0480018627.01.T01:CDS 20.0%
!! GTTGTAGTTATTTATTTGTT+TGG + Chr4:7746439-7746458 MsG0480018627.01.T01:intron 20.0%
!! TAAATTACATAGATTGTGTA+TGG + Chr4:7753628-7753647 MsG0480018627.01.T01:three_prime_UTR 20.0%
!! TACTTATACTAAAAGATAAG+TGG - Chr4:7753656-7753675 None:intergenic 20.0%
!! TATATAATCAATGCATCTTA+CGG + Chr4:7751619-7751638 MsG0480018627.01.T01:intron 20.0%
!! TATTAATGAACTCATTATAG+TGG - Chr4:7751708-7751727 None:intergenic 20.0%
!! TCAAATAAAGAACACAAATT+GGG - Chr4:7746406-7746425 None:intergenic 20.0%
!! TTCAAATAAAGAACACAAAT+TGG - Chr4:7746407-7746426 None:intergenic 20.0%
!! TTTATACTAAAAGGAAAAGA+AGG + Chr4:7750902-7750921 MsG0480018627.01.T01:CDS 20.0%
!!! AAATAAATTGTGTGTTGTTA+TGG - Chr4:7751806-7751825 None:intergenic 20.0%
!!! ATATAATTTTAGTGCTTGTT+TGG - Chr4:7752166-7752185 None:intergenic 20.0%
!!! CTTTTAGTATAAACTTGTAT+AGG - Chr4:7750895-7750914 None:intergenic 20.0%
!!! CTTTTTGCCTAAATTTTTAT+TGG + Chr4:7753437-7753456 MsG0480018627.01.T01:three_prime_UTR 20.0%
!!! TATTTTAATCTGAAATAAGC+TGG + Chr4:7751821-7751840 MsG0480018627.01.T01:intron 20.0%
!!! TTGTATTATTCTTTCAGTTT+TGG + Chr4:7753585-7753604 MsG0480018627.01.T01:three_prime_UTR 20.0%
! AACAAACAAGTATGTTCTAA+TGG + Chr4:7747195-7747214 MsG0480018627.01.T01:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - Chr4:7747888-7747907 None:intergenic 25.0%
! AAGATATTGTGGATGTTAAA+AGG - Chr4:7750420-7750439 None:intergenic 25.0%
! AAGATGTTTAAGTGAACTAA+TGG + Chr4:7746980-7746999 MsG0480018627.01.T01:intron 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + Chr4:7748637-7748656 MsG0480018627.01.T01:intron 25.0%
! AATAATTGTTCTTGAGGATT+GGG + Chr4:7750985-7751004 MsG0480018627.01.T01:CDS 25.0%
! AATTCCAATCTATAAGAACA+AGG - Chr4:7749075-7749094 None:intergenic 25.0%
! AGAACTTCAGAAAATAATAG+AGG + Chr4:7751015-7751034 MsG0480018627.01.T01:CDS 25.0%
! AGAGTTCTTGTAAATAAAAC+GGG - Chr4:7752887-7752906 None:intergenic 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + Chr4:7748638-7748657 MsG0480018627.01.T01:intron 25.0%
! ATATACATTAAGGGTCTATT+TGG + Chr4:7746917-7746936 MsG0480018627.01.T01:intron 25.0%
! ATATCTAAACTGTGTAACTT+GGG + Chr4:7748368-7748387 MsG0480018627.01.T01:intron 25.0%
! ATCAGATATATTCTAGTCAA+TGG - Chr4:7752913-7752932 None:intergenic 25.0%
! ATCCTTCATTAAATAAGTTG+TGG + Chr4:7749351-7749370 MsG0480018627.01.T01:intron 25.0%
! ATGATGATACAAACAAAACA+AGG - Chr4:7751532-7751551 None:intergenic 25.0%
! ATGTAGTGAAAAATAAGCAA+GGG - Chr4:7750717-7750736 None:intergenic 25.0%
! ATGTTTCAAGAGACAAAAAA+TGG - Chr4:7746306-7746325 None:intergenic 25.0%
! ATTCCAATCTATAAGAACAA+GGG - Chr4:7749074-7749093 None:intergenic 25.0%
! CAAATAAAGAACACAAATTG+GGG - Chr4:7746405-7746424 None:intergenic 25.0%
! CATCATAGATTAAAACCAAA+AGG - Chr4:7746507-7746526 None:intergenic 25.0%
! CTTATATTTATCCCAAGTTT+CGG + Chr4:7749601-7749620 MsG0480018627.01.T01:intron 25.0%
! GAAAAGAAGGTGATATTATT+TGG + Chr4:7750915-7750934 MsG0480018627.01.T01:CDS 25.0%
! GAAACTATAACTATTATCGT+CGG - Chr4:7749283-7749302 None:intergenic 25.0%
! GACGATAATAGTTATAGTTT+CGG + Chr4:7749282-7749301 MsG0480018627.01.T01:intron 25.0%
! GATTATATATGTACGAAACA+AGG - Chr4:7751608-7751627 None:intergenic 25.0%
! GCAGCGTTAAAAAATAAAAA+AGG + Chr4:7751217-7751236 MsG0480018627.01.T01:CDS 25.0%
! GTATTTATGTAGAATTCAAG+AGG + Chr4:7746816-7746835 MsG0480018627.01.T01:intron 25.0%
! GTTCTTATAGATTGGAATTA+AGG + Chr4:7749076-7749095 MsG0480018627.01.T01:intron 25.0%
! TAACTTCAAATAGGAAAAAG+GGG - Chr4:7746739-7746758 None:intergenic 25.0%
! TATAAACAACCACTACATAA+CGG - Chr4:7750830-7750849 None:intergenic 25.0%
! TTAATTCAGGATATTCCATT+AGG - Chr4:7750268-7750287 None:intergenic 25.0%
! TTACACAGTTTAGATATCTT+GGG - Chr4:7748365-7748384 None:intergenic 25.0%
! TTCCACAACTTATTTAATGA+AGG - Chr4:7749356-7749375 None:intergenic 25.0%
! TTGAAACATGTACAAAACAA+GGG + Chr4:7746317-7746336 MsG0480018627.01.T01:CDS 25.0%
!! AACACCTTAAAGTAAAGTTT+TGG - Chr4:7750306-7750325 None:intergenic 25.0%
!! AACTTTTCAATGAGATTATG+AGG - Chr4:7749136-7749155 None:intergenic 25.0%
!! ACACCTTAAAGTAAAGTTTT+GGG - Chr4:7750305-7750324 None:intergenic 25.0%
!! AGAAAAATCTTTTCTCCTAA+TGG + Chr4:7750250-7750269 MsG0480018627.01.T01:intron 25.0%
!! ATATTTTTCATCATGTGTTC+AGG + Chr4:7750847-7750866 MsG0480018627.01.T01:intron 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + Chr4:7747905-7747924 MsG0480018627.01.T01:intron 25.0%
!! TTAGGAGAAAAGATTTTTCT+AGG - Chr4:7750250-7750269 None:intergenic 25.0%
!! TTCCATCTTAGATTTTTCAT+CGG - Chr4:7750134-7750153 None:intergenic 25.0%
!! TTGTTCTGCATAAATTTTAC+AGG + Chr4:7747130-7747149 MsG0480018627.01.T01:intron 25.0%
!! TTTGGTCGAAAACATTTTTA+AGG + Chr4:7747491-7747510 MsG0480018627.01.T01:intron 25.0%
!!! ACATTGGTTTAAATGATTAC+TGG - Chr4:7752345-7752364 None:intergenic 25.0%
!!! ACTTTTTTGTTCATTTCTGA+AGG - Chr4:7746282-7746301 None:intergenic 25.0%
!!! GTTTGTTAAGTTTTTGTAAC+AGG - Chr4:7752011-7752030 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - Chr4:7748030-7748049 None:intergenic 25.0%
!!! TTTTTATTTTTTAACGCTGC+AGG - Chr4:7751217-7751236 None:intergenic 25.0%
AAAAGTGAAAACAACGTAAC+TGG - Chr4:7747544-7747563 None:intergenic 30.0%
AAATAAAAAAGGGACGATTG+TGG + Chr4:7751228-7751247 MsG0480018627.01.T01:CDS 30.0%
AAATAAACCTGTTGTTCAGA+TGG - Chr4:7746365-7746384 None:intergenic 30.0%
AAATGTGCAAGTTTACACAT+TGG - Chr4:7752361-7752380 None:intergenic 30.0%
AAGTGTATTAAGGATGAAGA+GGG - Chr4:7749428-7749447 None:intergenic 30.0%
ACTTCAGAAAATAATAGAGG+AGG + Chr4:7751018-7751037 MsG0480018627.01.T01:CDS 30.0%
AGAGAGATATTAAGGATAGA+TGG - Chr4:7749388-7749407 None:intergenic 30.0%
ATAAGCGCTAATTACGTTAA+AGG + Chr4:7750348-7750367 MsG0480018627.01.T01:intron 30.0%
ATAGTTCAGGATTTAAGCTT+TGG - Chr4:7750504-7750523 None:intergenic 30.0%
ATATAAGATAGCTAGGAAAG+AGG - Chr4:7749588-7749607 None:intergenic 30.0%
ATGATCCTAAACTTGGTTTA+TGG + Chr4:7747374-7747393 MsG0480018627.01.T01:CDS 30.0%
ATGTTAAAAGGATAGGAGAT+CGG - Chr4:7750408-7750427 None:intergenic 30.0%
ATTCCAACACAAGATATTAG+AGG - Chr4:7749831-7749850 None:intergenic 30.0%
ATTGTGGATGTTAAAAGGAT+AGG - Chr4:7750415-7750434 None:intergenic 30.0%
CACTTAGAGAAGAACTAATT+AGG + Chr4:7751491-7751510 MsG0480018627.01.T01:intron 30.0%
CGGAATCAAACAATTTGAAA+AGG - Chr4:7751440-7751459 None:intergenic 30.0%
CTTAGAACTAAAACTTGTGA+AGG - Chr4:7746177-7746196 None:intergenic 30.0%
CTTCTGATGAAAAAACAACA+GGG + Chr4:7752281-7752300 MsG0480018627.01.T01:intron 30.0%
CTTGAAACATGTACAAAACA+AGG + Chr4:7746316-7746335 MsG0480018627.01.T01:CDS 30.0%
GAAAGAGTGAAACAAGAAAA+GGG - Chr4:7746260-7746279 None:intergenic 30.0%
GAACAGAATAATTGTTCTTG+AGG + Chr4:7750979-7750998 MsG0480018627.01.T01:CDS 30.0%
GAAGGATTATACCAATCTTT+AGG - Chr4:7749527-7749546 None:intergenic 30.0%
GAATAATTGTTCTTGAGGAT+TGG + Chr4:7750984-7751003 MsG0480018627.01.T01:CDS 30.0%
GAGTTCTTGTAAATAAAACG+GGG - Chr4:7752886-7752905 None:intergenic 30.0%
GATATCTAAACTGTGTAACT+TGG + Chr4:7748367-7748386 MsG0480018627.01.T01:intron 30.0%
GATGTAGTGAAAAATAAGCA+AGG - Chr4:7750718-7750737 None:intergenic 30.0%
GGGATAAATATAAGATAGCT+AGG - Chr4:7749595-7749614 None:intergenic 30.0%
GTTACACAGTTTAGATATCT+TGG - Chr4:7748366-7748385 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + Chr4:7747848-7747867 MsG0480018627.01.T01:intron 30.0%
TACAAGTACTACAATCAATG+AGG + Chr4:7753188-7753207 MsG0480018627.01.T01:CDS 30.0%
TAGAAACAAGACGGAATATA+TGG - Chr4:7748460-7748479 None:intergenic 30.0%
TATCTAAACTGTGTAACTTG+GGG + Chr4:7748369-7748388 MsG0480018627.01.T01:intron 30.0%
TATGACTTTACAGTCTAAAC+AGG + Chr4:7749985-7750004 MsG0480018627.01.T01:intron 30.0%
TATTGTTATGGGAAAATCTC+CGG + Chr4:7748680-7748699 MsG0480018627.01.T01:intron 30.0%
TCAAACAATTTGAAAAGGAG+CGG - Chr4:7751435-7751454 None:intergenic 30.0%
TCTTTGATAGAACATTATGG+CGG - Chr4:7747841-7747860 None:intergenic 30.0%
TGGAATGTAACTTCAGTAAA+AGG - Chr4:7748440-7748459 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - Chr4:7747844-7747863 None:intergenic 30.0%
TTAGATTCTTCTTCCATTGT+TGG - Chr4:7753249-7753268 None:intergenic 30.0%
TTCCAACACAAGATATTAGA+GGG - Chr4:7749830-7749849 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - Chr4:7749073-7749092 None:intergenic 30.0%
TTGGAATATAGGTACTCTTA+CGG - Chr4:7750626-7750645 None:intergenic 30.0%
TTTAGACTGTAAAGTCATAC+CGG - Chr4:7749984-7750003 None:intergenic 30.0%
! ACGCAAAAATAGCTTGATTT+TGG + Chr4:7747088-7747107 MsG0480018627.01.T01:intron 30.0%
! AGATCGATTTCTTTCTCATT+AGG - Chr4:7750027-7750046 None:intergenic 30.0%
! CGTTTCTTTAAAAGCTCATT+CGG + Chr4:7751458-7751477 MsG0480018627.01.T01:intron 30.0%
! CTAATTAGTTCTTCTCTAAG+TGG - Chr4:7751493-7751512 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + Chr4:7747883-7747902 MsG0480018627.01.T01:intron 30.0%
! GTTTCTTTAAAAGCTCATTC+GGG + Chr4:7751459-7751478 MsG0480018627.01.T01:intron 30.0%
! TATTATGCTGTCTTGTTACA+TGG + Chr4:7753561-7753580 MsG0480018627.01.T01:three_prime_UTR 30.0%
! TCAATGGTAATGCATCTAAA+GGG - Chr4:7747402-7747421 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + Chr4:7748034-7748053 MsG0480018627.01.T01:intron 30.0%
! TTCTGCATAAATTTTACAGG+AGG + Chr4:7747133-7747152 MsG0480018627.01.T01:intron 30.0%
!! AGAAAAGATTTTTCTAGGAG+GGG - Chr4:7750245-7750264 None:intergenic 30.0%
!! ATTTTAGTGCTTGTTTGGAT+TGG - Chr4:7752161-7752180 None:intergenic 30.0%
!! CGAATGAGCTTTTAAAGAAA+CGG - Chr4:7751460-7751479 None:intergenic 30.0%
!! GAGAAAAGATTTTTCTAGGA+GGG - Chr4:7750246-7750265 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - Chr4:7748844-7748863 None:intergenic 30.0%
!! GGTTTTAACAAAAAGGTTTG+CGG - Chr4:7751981-7752000 None:intergenic 30.0%
!! TTTGTTCTTTGTTGTTGAAG+TGG - Chr4:7746653-7746672 None:intergenic 30.0%
!!! ACTTTTAAAACGAATGAGCA+AGG - Chr4:7750760-7750779 None:intergenic 30.0%
!!! AGAGAGATTGTTTTAGAGAT+TGG - Chr4:7749643-7749662 None:intergenic 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - Chr4:7748838-7748857 None:intergenic 30.0%
!!! ATTGGTTTTTCTGTGTTTAG+TGG + Chr4:7746857-7746876 MsG0480018627.01.T01:intron 30.0%
!!! CTTTTAAAACGAATGAGCAA+GGG - Chr4:7750759-7750778 None:intergenic 30.0%
!!! GATTGTTTTGATGTCAAATG+TGG + Chr4:7752678-7752697 MsG0480018627.01.T01:intron 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - Chr4:7748619-7748638 None:intergenic 30.0%
AACCAAAAGGAACAAACTCA+TGG - Chr4:7746494-7746513 None:intergenic 35.0%
AACTACCCAACATAGAGTAA+TGG - Chr4:7749951-7749970 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - Chr4:7748432-7748451 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + Chr4:7748232-7748251 MsG0480018627.01.T01:intron 35.0%
AAGAAAAGAGACTCACGTTA+CGG - Chr4:7748964-7748983 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - Chr4:7747960-7747979 None:intergenic 35.0%
AAGAGTGAAGAATCTGAAGA+TGG + Chr4:7751178-7751197 MsG0480018627.01.T01:CDS 35.0%
AAGCCTATAGTTCATAAGCT+AGG + Chr4:7746194-7746213 MsG0480018627.01.T01:CDS 35.0%
AAGTAGTAGACACTATGACT+AGG - Chr4:7750591-7750610 None:intergenic 35.0%
AATCAAGTGGTGGCATTTAA+AGG - Chr4:7749870-7749889 None:intergenic 35.0%
AATCTTTAGGTACCAAGGAA+GGG - Chr4:7749514-7749533 None:intergenic 35.0%
AATGAAGAACTTTCTCCTAG+TGG - Chr4:7753384-7753403 None:intergenic 35.0%
AATGGCTCATGAGATTAAGA+AGG - Chr4:7749762-7749781 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - Chr4:7749045-7749064 None:intergenic 35.0%
ACAGTGTTCAGAGTAAAGTT+CGG - Chr4:7749670-7749689 None:intergenic 35.0%
ACATGAAGAGCAGTTTCATT+TGG + Chr4:7753221-7753240 MsG0480018627.01.T01:CDS 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - Chr4:7748431-7748450 None:intergenic 35.0%
AGACACTTAGTAATGCTAGA+TGG - Chr4:7752037-7752056 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - Chr4:7748093-7748112 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - Chr4:7747876-7747895 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - Chr4:7748041-7748060 None:intergenic 35.0%
AGCATTACTAAGTGTCTGTT+TGG + Chr4:7752040-7752059 MsG0480018627.01.T01:intron 35.0%
AGCCGATGAAAAATCTAAGA+TGG + Chr4:7750129-7750148 MsG0480018627.01.T01:intron 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - Chr4:7748228-7748247 None:intergenic 35.0%
AGGTGATATTATTTGGCAAC+CGG + Chr4:7750922-7750941 MsG0480018627.01.T01:CDS 35.0%
AGTGTAAAAATGCCGAAACT+TGG - Chr4:7749616-7749635 None:intergenic 35.0%
ATAACAATAGGACTACACCA+AGG - Chr4:7748669-7748688 None:intergenic 35.0%
ATACCAATCTTTAGGTACCA+AGG - Chr4:7749519-7749538 None:intergenic 35.0%
ATACCATGAAGTTATGGGAA+AGG - Chr4:7749004-7749023 None:intergenic 35.0%
ATCAAGTGGTGGCATTTAAA+GGG - Chr4:7749869-7749888 None:intergenic 35.0%
ATCTATATACAAGCTTGCGA+AGG - Chr4:7749486-7749505 None:intergenic 35.0%
ATCTCATCACTTACAAGAGT+GGG - Chr4:7750063-7750082 None:intergenic 35.0%
ATCTTACGGCCAAAAGAAAA+GGG + Chr4:7751633-7751652 MsG0480018627.01.T01:intron 35.0%
ATTCAACAGCCAAAAGTTCA+TGG - Chr4:7751775-7751794 None:intergenic 35.0%
ATTTAAAGGGTGACAAACGA+AGG - Chr4:7749856-7749875 None:intergenic 35.0%
CATCACCATTACTCTATGTT+GGG + Chr4:7749943-7749962 MsG0480018627.01.T01:intron 35.0%
CATCCTTAATACACTTCACT+TGG + Chr4:7749432-7749451 MsG0480018627.01.T01:intron 35.0%
CCTCCCAAAACTTTACTTTA+AGG + Chr4:7750299-7750318 MsG0480018627.01.T01:intron 35.0%
CTACTAAAAGATTGCGACTT+TGG + Chr4:7747328-7747347 MsG0480018627.01.T01:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr4:7748016-7748035 None:intergenic 35.0%
GAAACATGAAAAGCAACACT+AGG - Chr4:7746230-7746249 None:intergenic 35.0%
GAAGTGTATTAAGGATGAAG+AGG - Chr4:7749429-7749448 None:intergenic 35.0%
GAGTCATACCATGAAGTTAT+GGG - Chr4:7749009-7749028 None:intergenic 35.0%
GAGTGAAAGTTGTTAAGAAG+TGG + Chr4:7746879-7746898 MsG0480018627.01.T01:intron 35.0%
GATCCTAGCTTATGAACTAT+AGG - Chr4:7746200-7746219 None:intergenic 35.0%
GCATGAAGAACAGTTTCATT+TGG + Chr4:7752547-7752566 MsG0480018627.01.T01:CDS 35.0%
GCTATGTTTGCCGAAAATAT+AGG + Chr4:7751094-7751113 MsG0480018627.01.T01:CDS 35.0%
GCTTCTGATGAAAAAACAAC+AGG + Chr4:7752280-7752299 MsG0480018627.01.T01:intron 35.0%
GGAAAGAGTGAAACAAGAAA+AGG - Chr4:7746261-7746280 None:intergenic 35.0%
GGAGAACAGTTTCTAATAGT+TGG + Chr4:7747349-7747368 MsG0480018627.01.T01:CDS 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - Chr4:7747963-7747982 None:intergenic 35.0%
GTACTTGTACTTATCTCTTG+TGG - Chr4:7753177-7753196 None:intergenic 35.0%
GTGTAAAAATGCCGAAACTT+GGG - Chr4:7749615-7749634 None:intergenic 35.0%
GTTATACTCCATCATTGACA+TGG - Chr4:7746775-7746794 None:intergenic 35.0%
GTTTCAAAAGGTTCAACTGA+TGG - Chr4:7751370-7751389 None:intergenic 35.0%
GTTTCATTTGGCATCAACAA+TGG + Chr4:7752559-7752578 MsG0480018627.01.T01:CDS 35.0%
TAACAATAGGACTACACCAA+GGG - Chr4:7748668-7748687 None:intergenic 35.0%
TAACTATTATCGTCGGATTC+AGG - Chr4:7749276-7749295 None:intergenic 35.0%
TAATGATATGTGGGAGAGAA+TGG - Chr4:7749780-7749799 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - Chr4:7749046-7749065 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - Chr4:7748305-7748324 None:intergenic 35.0%
TACCATGAAGTTATGGGAAA+GGG - Chr4:7749003-7749022 None:intergenic 35.0%
TACTCTTACGGGTAAATCTA+TGG - Chr4:7750614-7750633 None:intergenic 35.0%
TAGATGCATTACCATTGACA+TGG + Chr4:7747404-7747423 MsG0480018627.01.T01:CDS 35.0%
TCCAATCTATAAGAACAAGG+GGG - Chr4:7749072-7749091 None:intergenic 35.0%
TCCCAGGCCAATAAAAATTT+AGG - Chr4:7753447-7753466 None:intergenic 35.0%
TCTATATACAAGCTTGCGAA+GGG - Chr4:7749485-7749504 None:intergenic 35.0%
TCTTCTTCAACAACTTCACT+TGG - Chr4:7751331-7751350 None:intergenic 35.0%
TGAAAATGCTCAGTTAAGCA+AGG + Chr4:7752460-7752479 MsG0480018627.01.T01:intron 35.0%
TGAGTCATACCATGAAGTTA+TGG - Chr4:7749010-7749029 None:intergenic 35.0%
TGGAATATAGGTACTCTTAC+GGG - Chr4:7750625-7750644 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - Chr4:7748021-7748040 None:intergenic 35.0%
TGGTGTAGTCCTATTGTTAT+GGG + Chr4:7748669-7748688 MsG0480018627.01.T01:intron 35.0%
TGTTCATAGTTTCCCATGTT+TGG - Chr4:7750964-7750983 None:intergenic 35.0%
TGTTGAAGAAGAAAAGACCA+TGG + Chr4:7751339-7751358 MsG0480018627.01.T01:CDS 35.0%
TTAGACTGTAAAGTCATACC+GGG - Chr4:7749983-7750002 None:intergenic 35.0%
TTAGTAGCTGAAACTCAACA+CGG - Chr4:7747315-7747334 None:intergenic 35.0%
TTCTCATTAGGAAAACAGAC+AGG - Chr4:7750015-7750034 None:intergenic 35.0%
TTCTGATCCTGAGTTTCAAA+AGG - Chr4:7751382-7751401 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + Chr4:7747964-7747983 MsG0480018627.01.T01:intron 35.0%
TTGGTGTAGTCCTATTGTTA+TGG + Chr4:7748668-7748687 MsG0480018627.01.T01:intron 35.0%
TTGTTCCACTACACACTTTA+AGG + Chr4:7750375-7750394 MsG0480018627.01.T01:intron 35.0%
TTTAGGGATTTGAGTCCTAA+AGG - Chr4:7747253-7747272 None:intergenic 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - Chr4:7748241-7748260 None:intergenic 35.0%
! AGGATTTAAGCTTTGGTACA+CGG - Chr4:7750497-7750516 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - Chr4:7747864-7747883 None:intergenic 35.0%
! CAATGTTTCCCCTTTTCTTT+TGG - Chr4:7751645-7751664 None:intergenic 35.0%
! CTTAAAACTCTGGTTTCCAT+CGG - Chr4:7747663-7747682 None:intergenic 35.0%
! GAGATGTTACCATGAACTTT+TGG + Chr4:7751763-7751782 MsG0480018627.01.T01:intron 35.0%
! GGAGAAAAGATTTTTCTAGG+AGG - Chr4:7750247-7750266 None:intergenic 35.0%
! GGAGATTTTCCCATAACAAT+AGG - Chr4:7748681-7748700 None:intergenic 35.0%
! GTCAATGGTAATGCATCTAA+AGG - Chr4:7747403-7747422 None:intergenic 35.0%
! TAAGAGCTCAAAGTGTTTCA+TGG + Chr4:7753475-7753494 MsG0480018627.01.T01:three_prime_UTR 35.0%
! TATAGCCTTAAAGTGTGTAG+TGG - Chr4:7750383-7750402 None:intergenic 35.0%
! TATTTTTCACTACATCCAGG+CGG + Chr4:7750722-7750741 MsG0480018627.01.T01:intron 35.0%
! TCTGCAAAAAGCATACATCT+CGG + Chr4:7748573-7748592 MsG0480018627.01.T01:intron 35.0%
! TGCCTAAATTTTTATTGGCC+TGG + Chr4:7753442-7753461 MsG0480018627.01.T01:three_prime_UTR 35.0%
! TTCACTTGTAGGCTTTAGTT+AGG + Chr4:7752305-7752324 MsG0480018627.01.T01:intron 35.0%
! TTTTCCATCCATGTCAATGA+TGG + Chr4:7746764-7746783 MsG0480018627.01.T01:intron 35.0%
!! AAAGTCGATGCTAGTCTTAA+TGG + Chr4:7753073-7753092 MsG0480018627.01.T01:intron 35.0%
!! AGCTTAATCGATTTTGAAGG+AGG + Chr4:7751256-7751275 MsG0480018627.01.T01:CDS 35.0%
!! AGTAATGGTGATGGATGTAA+GGG - Chr4:7749936-7749955 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + Chr4:7748749-7748768 MsG0480018627.01.T01:intron 35.0%
!! GCCTAAATTTTTATTGGCCT+GGG + Chr4:7753443-7753462 MsG0480018627.01.T01:three_prime_UTR 35.0%
!! GCTTATTTTTCACTACATCC+AGG + Chr4:7750719-7750738 MsG0480018627.01.T01:intron 35.0%
!! GGAAGCTTAATCGATTTTGA+AGG + Chr4:7751253-7751272 MsG0480018627.01.T01:CDS 35.0%
!! TATAGGATTGATTTTCCAGC+CGG - Chr4:7750878-7750897 None:intergenic 35.0%
!! TCTGCAGGGTTTTAACAAAA+AGG - Chr4:7751988-7752007 None:intergenic 35.0%
!! TTCCATGAGTTTGTTCCTTT+TGG + Chr4:7746489-7746508 MsG0480018627.01.T01:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + Chr4:7748338-7748357 MsG0480018627.01.T01:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - Chr4:7748939-7748958 None:intergenic 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - Chr4:7748938-7748957 None:intergenic 35.0%
!!! AGTTGAACCTTTTGAAACTC+AGG + Chr4:7751372-7751391 MsG0480018627.01.T01:CDS 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG - Chr4:7750302-7750321 None:intergenic 35.0%
!!! CGTTTTGGAACTTGGAATAT+AGG - Chr4:7750637-7750656 None:intergenic 35.0%
!!! CTCTTTTGGTCTTAAAACTC+TGG - Chr4:7747673-7747692 None:intergenic 35.0%
AAAAAAGGGACGATTGTGGA+GGG + Chr4:7751232-7751251 MsG0480018627.01.T01:CDS 40.0%
AAGGTGGCAAAAGAGACATT+GGG - Chr4:7749743-7749762 None:intergenic 40.0%
AATCTGAGCAGCAACATCAA+TGG - Chr4:7752758-7752777 None:intergenic 40.0%
ACAACATACCTATCGAAGTG+TGG - Chr4:7749196-7749215 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - Chr4:7748066-7748085 None:intergenic 40.0%
ACTTCCTGTGATATACCGTT+AGG + Chr4:7752949-7752968 MsG0480018627.01.T01:intron 40.0%
ACTTCGATAGGTATGTTGTC+CGG + Chr4:7749197-7749216 MsG0480018627.01.T01:intron 40.0%
AGAAGCTAGTTCATGAGAGT+AGG - Chr4:7750663-7750682 None:intergenic 40.0%
AGATATTAGAGGGAGGTTTC+AGG - Chr4:7749820-7749839 None:intergenic 40.0%
AGATCTTACCAGACTCTAAC+AGG - Chr4:7749328-7749347 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - Chr4:7748742-7748761 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - Chr4:7747935-7747954 None:intergenic 40.0%
ATATCATTAGCGCTTCCATG+TGG + Chr4:7749791-7749810 MsG0480018627.01.T01:intron 40.0%
ATCATGTGTTCAGGATATGC+CGG + Chr4:7750856-7750875 MsG0480018627.01.T01:intron 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG - Chr4:7749185-7749204 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + Chr4:7748401-7748420 MsG0480018627.01.T01:intron 40.0%
ATCTTTAGGTACCAAGGAAG+GGG - Chr4:7749513-7749532 None:intergenic 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + Chr4:7749317-7749336 MsG0480018627.01.T01:intron 40.0%
ATTAAGCCAGGTACAAGAAC+AGG - Chr4:7751283-7751302 None:intergenic 40.0%
CAACACAAGATATTAGAGGG+AGG - Chr4:7749827-7749846 None:intergenic 40.0%
CAAGATTGCGCGAATTATAG+GGG - Chr4:7749044-7749063 None:intergenic 40.0%
CAATCTTTAGGTACCAAGGA+AGG - Chr4:7749515-7749534 None:intergenic 40.0%
CACGTTACGGATAACCAATT+TGG - Chr4:7748951-7748970 None:intergenic 40.0%
CATCTCATCACTTACAAGAG+TGG - Chr4:7750064-7750083 None:intergenic 40.0%
CATCTTACGGCCAAAAGAAA+AGG + Chr4:7751632-7751651 MsG0480018627.01.T01:intron 40.0%
CATGGTCTGATGGTCATATA+TGG + Chr4:7747422-7747441 MsG0480018627.01.T01:CDS 40.0%
CCAACATAGAGTAATGGTGA+TGG - Chr4:7749945-7749964 None:intergenic 40.0%
CCATCACCATTACTCTATGT+TGG + Chr4:7749942-7749961 MsG0480018627.01.T01:intron 40.0%
CGAAGTTAGATCGAGAAATG+GGG - Chr4:7750473-7750492 None:intergenic 40.0%
CGGTGAATTTGACACAATCA+TGG - Chr4:7752138-7752157 None:intergenic 40.0%
CTACAAGAAACTAAGTGGGT+GGG - Chr4:7750547-7750566 None:intergenic 40.0%
CTATCCAGGATATGTATGAG+GGG - Chr4:7748740-7748759 None:intergenic 40.0%
CTCCCTCTAATATCTTGTGT+TGG + Chr4:7749825-7749844 MsG0480018627.01.T01:intron 40.0%
CTTCCTGTGATATACCGTTA+GGG + Chr4:7752950-7752969 MsG0480018627.01.T01:intron 40.0%
CTTCCTTGGTACCTAAAGAT+TGG + Chr4:7749513-7749532 MsG0480018627.01.T01:intron 40.0%
CTTGCGAAATGACATCGAAT+GGG + Chr4:7753293-7753312 MsG0480018627.01.T01:CDS 40.0%
GAAAAGGATGAGTAATGGCA+AGG - Chr4:7749231-7749250 None:intergenic 40.0%
GAAACTTCTTTACCGTTTCG+CGG - Chr4:7753320-7753339 None:intergenic 40.0%
GAAATCGATCTGAGAACAAG+AGG + Chr4:7750036-7750055 MsG0480018627.01.T01:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG - Chr4:7748067-7748086 None:intergenic 40.0%
GAGTCTTTGCAACAAGTCTA+GGG - Chr4:7752801-7752820 None:intergenic 40.0%
GATGTATGCAACCTCAATTG+TGG + Chr4:7752703-7752722 MsG0480018627.01.T01:intron 40.0%
GCGAAGTTAGATCGAGAAAT+GGG - Chr4:7750474-7750493 None:intergenic 40.0%
GCGAGAGAATTAGATAGTTC+AGG - Chr4:7750517-7750536 None:intergenic 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - Chr4:7749236-7749255 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG - Chr4:7748741-7748760 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + Chr4:7748798-7748817 MsG0480018627.01.T01:intron 40.0%
GGACCAAGTGAAGTGTATTA+AGG - Chr4:7749438-7749457 None:intergenic 40.0%
GGAGCTAGAAGGATTAATTC+AGG - Chr4:7750281-7750300 None:intergenic 40.0%
GGAGTGGAAGAAAGATATTG+TGG - Chr4:7750431-7750450 None:intergenic 40.0%
GGATCGAGTAATCCAAACAT+GGG + Chr4:7750949-7750968 MsG0480018627.01.T01:CDS 40.0%
GGGTCCATAGTACAAAATGA+CGG - Chr4:7748345-7748364 None:intergenic 40.0%
GGGTTCCATAAACCAAGTTT+AGG - Chr4:7747382-7747401 None:intergenic 40.0%
GGTGATATTATTTGGCAACC+GGG + Chr4:7750923-7750942 MsG0480018627.01.T01:CDS 40.0%
GGTGCAAGAGAGAGATATTA+AGG - Chr4:7749396-7749415 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - Chr4:7748306-7748325 None:intergenic 40.0%
GTGATATTATTTGGCAACCG+GGG + Chr4:7750924-7750943 MsG0480018627.01.T01:CDS 40.0%
GTGCCTACAAGAAACTAAGT+GGG - Chr4:7750551-7750570 None:intergenic 40.0%
GTGGTTAGACTAGACATGAT+AGG - Chr4:7748099-7748118 None:intergenic 40.0%
GTTGGAGATGATCCTAAACT+TGG + Chr4:7747367-7747386 MsG0480018627.01.T01:CDS 40.0%
GTTTCATTTGGCACCAACAA+TGG + Chr4:7753233-7753252 MsG0480018627.01.T01:CDS 40.0%
TAAAAAAGGGACGATTGTGG+AGG + Chr4:7751231-7751250 MsG0480018627.01.T01:CDS 40.0%
TAACAGGTTAGACATCAGAG+AGG - Chr4:7749312-7749331 None:intergenic 40.0%
TAATACACTTCACTTGGTCC+AGG + Chr4:7749438-7749457 MsG0480018627.01.T01:intron 40.0%
TACAAGAAACTAAGTGGGTG+GGG - Chr4:7750546-7750565 None:intergenic 40.0%
TACCCTTTCCCATAACTTCA+TGG + Chr4:7748998-7749017 MsG0480018627.01.T01:intron 40.0%
TACTCCATCATTGACATGGA+TGG - Chr4:7746771-7746790 None:intergenic 40.0%
TAGTAGACACTATGACTAGG+AGG - Chr4:7750588-7750607 None:intergenic 40.0%
TATAGATTTCTCCCCTTCCT+TGG + Chr4:7749499-7749518 MsG0480018627.01.T01:intron 40.0%
TATCCAGGATATGTATGAGG+GGG - Chr4:7748739-7748758 None:intergenic 40.0%
TCAAACTCAGAGCCAATTCA+TGG + Chr4:7752590-7752609 MsG0480018627.01.T01:CDS 40.0%
TCAACCAAATGAAGAACCTC+CGG + Chr4:7751051-7751070 MsG0480018627.01.T01:CDS 40.0%
TCAGGATCAGAATATACCAG+AGG + Chr4:7751390-7751409 MsG0480018627.01.T01:CDS 40.0%
TCCAAAATGTTCTCGAAACC+TGG + Chr4:7747576-7747595 MsG0480018627.01.T01:intron 40.0%
TCCCAGGCATAAAACCAAAT+TGG + Chr4:7748934-7748953 MsG0480018627.01.T01:intron 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + Chr4:7749068-7749087 MsG0480018627.01.T01:intron 40.0%
TCTAACTCAGAGCCAATTCA+TGG + Chr4:7753264-7753283 MsG0480018627.01.T01:CDS 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - Chr4:7748408-7748427 None:intergenic 40.0%
TCTCATCACTTACAAGAGTG+GGG - Chr4:7750062-7750081 None:intergenic 40.0%
TCTTACGGCCAAAAGAAAAG+GGG + Chr4:7751634-7751653 MsG0480018627.01.T01:intron 40.0%
TCTTCTGCATGTCTTCCTTT+AGG + Chr4:7747235-7747254 MsG0480018627.01.T01:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG - Chr4:7748068-7748087 None:intergenic 40.0%
TGAGAATGTTCAGTTGAGCA+AGG + Chr4:7753128-7753147 MsG0480018627.01.T01:intron 40.0%
TGAGTCTTTGCAACAAGTCT+AGG - Chr4:7752802-7752821 None:intergenic 40.0%
TGCCGAAAATATAGGTTCCT+CGG + Chr4:7751102-7751121 MsG0480018627.01.T01:CDS 40.0%
TGCCTATATTAGAGCTATCC+AGG - Chr4:7748754-7748773 None:intergenic 40.0%
TGGCATCAACAATGGAAGAA+GGG + Chr4:7752567-7752586 MsG0480018627.01.T01:CDS 40.0%
TGTGCCTACAAGAAACTAAG+TGG - Chr4:7750552-7750571 None:intergenic 40.0%
TTACCATTGACATGGTCTGA+TGG + Chr4:7747412-7747431 MsG0480018627.01.T01:CDS 40.0%
TTGCGAAATGACATCGAATG+GGG + Chr4:7753294-7753313 MsG0480018627.01.T01:CDS 40.0%
TTGGCATCAACAATGGAAGA+AGG + Chr4:7752566-7752585 MsG0480018627.01.T01:CDS 40.0%
! AGACTTTTCCACACTTCGAT+AGG + Chr4:7749185-7749204 MsG0480018627.01.T01:intron 40.0%
! AGTGTTTCATGGTGATGCAT+TGG + Chr4:7753486-7753505 MsG0480018627.01.T01:three_prime_UTR 40.0%
! AGTTTTTGTAACAGGTCTGC+AGG - Chr4:7752003-7752022 None:intergenic 40.0%
! CACCTTTTTACAGAACCACT+AGG + Chr4:7753366-7753385 MsG0480018627.01.T01:three_prime_UTR 40.0%
! CATGAGAGTAGGATTCGTTT+TGG - Chr4:7750652-7750671 None:intergenic 40.0%
! CGGTGAAAACAACACTCTTT+TGG - Chr4:7747687-7747706 None:intergenic 40.0%
! CTCCGAGGAACCTATATTTT+CGG - Chr4:7751107-7751126 None:intergenic 40.0%
! CTCCTAGTGGTTCTGTAAAA+AGG - Chr4:7753371-7753390 None:intergenic 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - Chr4:7748806-7748825 None:intergenic 40.0%
! GGATTTAAGCTTTGGTACAC+GGG - Chr4:7750496-7750515 None:intergenic 40.0%
! GTTTTTGTAACAGGTCTGCA+GGG - Chr4:7752002-7752021 None:intergenic 40.0%
! TCATATATGGACTGTTGAGC+TGG + Chr4:7747435-7747454 MsG0480018627.01.T01:CDS 40.0%
! TGATGGATGTAAGGGTTAAG+AGG - Chr4:7749928-7749947 None:intergenic 40.0%
! TGATGTTGCTGCTCAGATTT+TGG + Chr4:7752759-7752778 MsG0480018627.01.T01:intron 40.0%
! TGCGATTTTCCGCAATATCA+AGG - Chr4:7751878-7751897 None:intergenic 40.0%
! TGTCTGTTTGGAACCAATTG+CGG + Chr4:7752052-7752071 MsG0480018627.01.T01:intron 40.0%
! TGTTCGCTTTGTTGAACTTG+AGG - Chr4:7747179-7747198 None:intergenic 40.0%
! TTAGTGCTTGTTTGGATTGG+CGG - Chr4:7752158-7752177 None:intergenic 40.0%
! TTCTAGGAGGGGATTTGAAT+GGG - Chr4:7750234-7750253 None:intergenic 40.0%
! TTGGGAGAATCTAGAGGTTT+TGG - Chr4:7749725-7749744 None:intergenic 40.0%
! TTTCTAGGAGGGGATTTGAA+TGG - Chr4:7750235-7750254 None:intergenic 40.0%
! TTTTCGGCAAACATAGCCAT+TGG - Chr4:7751091-7751110 None:intergenic 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - Chr4:7749247-7749266 None:intergenic 40.0%
!! ATGGAAGCGCTAATGATATG+TGG - Chr4:7749790-7749809 None:intergenic 40.0%
!! ATTCCGTCTTGTTTCTACTC+AGG + Chr4:7748463-7748482 MsG0480018627.01.T01:intron 40.0%
!! GAGTAATGGTGATGGATGTA+AGG - Chr4:7749937-7749956 None:intergenic 40.0%
!! GGATGAAGAGGGTATAGTTT+TGG - Chr4:7749417-7749436 None:intergenic 40.0%
!! TGGAAGCGCTAATGATATGT+GGG - Chr4:7749789-7749808 None:intergenic 40.0%
!! TTTTATTGGCCTGGGAAAGA+TGG + Chr4:7753451-7753470 MsG0480018627.01.T01:three_prime_UTR 40.0%
!!! AATCTAGAGGTTTTGGACCT+AGG - Chr4:7749718-7749737 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - Chr4:7748935-7748954 None:intergenic 40.0%
!!! ATCTAGAGGTTTTGGACCTA+GGG - Chr4:7749717-7749736 None:intergenic 40.0%
!!! GTAGGATTCGTTTTGGAACT+TGG - Chr4:7750645-7750664 None:intergenic 40.0%
AAATGGGGTAGGCATCATTG+TGG - Chr4:7750458-7750477 None:intergenic 45.0%
AAATGTTCTCGAAACCTGGC+TGG + Chr4:7747580-7747599 MsG0480018627.01.T01:intron 45.0%
AACAACAGGGCTTCACTTGT+AGG + Chr4:7752294-7752313 MsG0480018627.01.T01:intron 45.0%
AACTAAGTGGGTGGGGAAAA+AGG - Chr4:7750539-7750558 None:intergenic 45.0%
AAGCCCTAACGGTATATCAC+AGG - Chr4:7752956-7752975 None:intergenic 45.0%
AATTAGCGCTTATGCACCTC+AGG - Chr4:7750341-7750360 None:intergenic 45.0%
ACCGGCAATGTTGTATGGTA+CGG - Chr4:7748194-7748213 None:intergenic 45.0%
AGAACCGGAGGTTCTTCATT+TGG - Chr4:7751058-7751077 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG - Chr4:7749459-7749478 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - Chr4:7747951-7747970 None:intergenic 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG - Chr4:7749579-7749598 None:intergenic 45.0%
AGCTCTTATCCATCTTTCCC+AGG - Chr4:7753463-7753482 None:intergenic 45.0%
AGTCGCGATCCTTGATATTG+CGG + Chr4:7751866-7751885 MsG0480018627.01.T01:intron 45.0%
AGTCTTGGCGATAGAGGAAT+TGG - Chr4:7749170-7749189 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - Chr4:7748302-7748321 None:intergenic 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - Chr4:7749224-7749243 None:intergenic 45.0%
ATGCATGCAACCTCAGTTGT+GGG + Chr4:7751912-7751931 MsG0480018627.01.T01:intron 45.0%
ATTCAAGCTGGGTGGTTGAA+TGG - Chr4:7748294-7748313 None:intergenic 45.0%
ATTTGAATGGGCATGTAGGG+AGG - Chr4:7750222-7750241 None:intergenic 45.0%
CACCAAGATTCTTTACCCCT+AGG + Chr4:7749698-7749717 MsG0480018627.01.T01:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG - Chr4:7748065-7748084 None:intergenic 45.0%
CCACCCACTTAGTTTCTTGT+AGG + Chr4:7750545-7750564 MsG0480018627.01.T01:intron 45.0%
CCAGCTTCTTCTTCAGTCAA+CGG - Chr4:7751307-7751326 None:intergenic 45.0%
CCTACAAGAAACTAAGTGGG+TGG - Chr4:7750548-7750567 None:intergenic 45.0%
CCTTGCGAAATGACATCGAA+TGG + Chr4:7753292-7753311 MsG0480018627.01.T01:CDS 45.0%
CGAAAATATAGGTTCCTCGG+AGG + Chr4:7751105-7751124 MsG0480018627.01.T01:CDS 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - Chr4:7748146-7748165 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + Chr4:7748149-7748168 MsG0480018627.01.T01:intron 45.0%
CGGATCGAGTAATCCAAACA+TGG + Chr4:7750948-7750967 MsG0480018627.01.T01:CDS 45.0%
CTAACTCAACCCTACAAAGC+TGG - Chr4:7752981-7753000 None:intergenic 45.0%
CTAGGGGTAAAGAATCTTGG+TGG - Chr4:7749700-7749719 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + Chr4:7748261-7748280 MsG0480018627.01.T01:intron 45.0%
CTTGCGAAATGACATCCAGT+GGG + Chr4:7752619-7752638 MsG0480018627.01.T01:CDS 45.0%
GAAAGCAGACCGTTATGTAG+TGG + Chr4:7750818-7750837 MsG0480018627.01.T01:intron 45.0%
GAAGGTGGCAAAAGAGACAT+TGG - Chr4:7749744-7749763 None:intergenic 45.0%
GACCTAGGGGTAAAGAATCT+TGG - Chr4:7749703-7749722 None:intergenic 45.0%
GAGACATTGGGAGAATCTAG+AGG - Chr4:7749731-7749750 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - Chr4:7747941-7747960 None:intergenic 45.0%
GCATCATTGTGGATAAGGAG+TGG - Chr4:7750447-7750466 None:intergenic 45.0%
GCGAGAACTCAAGCATTTGA+AGG - Chr4:7749545-7749564 None:intergenic 45.0%
GGATGTAAGGGTTAAGAGGA+GGG - Chr4:7749924-7749943 None:intergenic 45.0%
GGCGAAGTTAGATCGAGAAA+TGG - Chr4:7750475-7750494 None:intergenic 45.0%
GGCTCATGAGATTAAGAAGG+TGG - Chr4:7749759-7749778 None:intergenic 45.0%
GGGATTTGAATGGGCATGTA+GGG - Chr4:7750225-7750244 None:intergenic 45.0%
GGTAGGCATCATTGTGGATA+AGG - Chr4:7750452-7750471 None:intergenic 45.0%
GTCTTGGCGATAGAGGAATT+GGG - Chr4:7749169-7749188 None:intergenic 45.0%
GTTAGATCGAGAAATGGGGT+AGG - Chr4:7750469-7750488 None:intergenic 45.0%
TAGACACTATGACTAGGAGG+AGG - Chr4:7750585-7750604 None:intergenic 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG - Chr4:7749576-7749595 None:intergenic 45.0%
TATTATTTGGCAACCGGGGT+CGG + Chr4:7750928-7750947 MsG0480018627.01.T01:CDS 45.0%
TCAGTCAACGGTATTAAGCC+AGG - Chr4:7751295-7751314 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + Chr4:7748190-7748209 MsG0480018627.01.T01:intron 45.0%
TGACCATCAGACCATGTCAA+TGG - Chr4:7747418-7747437 None:intergenic 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - Chr4:7749223-7749242 None:intergenic 45.0%
TGATGTTGCAACCCAGATCA+CGG + Chr4:7751955-7751974 MsG0480018627.01.T01:intron 45.0%
TGGAAAAGTCTTGGCGATAG+AGG - Chr4:7749176-7749195 None:intergenic 45.0%
TGGATGTAAGGGTTAAGAGG+AGG - Chr4:7749925-7749944 None:intergenic 45.0%
TGTAAAGTCATACCGGGAGA+GGG - Chr4:7749977-7749996 None:intergenic 45.0%
TGTTCTTCTAGTCCTACCTG+AGG + Chr4:7750322-7750341 MsG0480018627.01.T01:intron 45.0%
TGTTGTATGGTACGGAGTGT+TGG - Chr4:7748186-7748205 None:intergenic 45.0%
TTGCGAAATGACATCCAGTG+GGG + Chr4:7752620-7752639 MsG0480018627.01.T01:CDS 45.0%
TTTGAATGGGCATGTAGGGA+GGG - Chr4:7750221-7750240 None:intergenic 45.0%
! AAATGCCACCACTTGATTCG+CGG + Chr4:7749872-7749891 MsG0480018627.01.T01:intron 45.0%
! AACAAGGTGATGATGAGCGT+TGG - Chr4:7751592-7751611 None:intergenic 45.0%
! AACTCTGGTTTCCATCGGAA+AGG - Chr4:7747658-7747677 None:intergenic 45.0%
! ACTCTGGTTTCCATCGGAAA+GGG - Chr4:7747657-7747676 None:intergenic 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - Chr4:7748796-7748815 None:intergenic 45.0%
! ATGGCGACTCATGGTGATTT+TGG - Chr4:7752119-7752138 None:intergenic 45.0%
! ATTGGCTTCTCTGGTAGAAC+CGG - Chr4:7751073-7751092 None:intergenic 45.0%
! CAGCTTTGTAGGGTTGAGTT+AGG + Chr4:7752979-7752998 MsG0480018627.01.T01:intron 45.0%
! CCATTCGATGTCATTTCGCA+AGG - Chr4:7753295-7753314 None:intergenic 45.0%
! CGCAAGGCATTACCATGAAT+TGG - Chr4:7752605-7752624 None:intergenic 45.0%
! CTCAATTGTGGTTTGCGTTG+CGG + Chr4:7752715-7752734 MsG0480018627.01.T01:intron 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - Chr4:7748558-7748577 None:intergenic 45.0%
! GCCAGGTTTCGAGAACATTT+TGG - Chr4:7747580-7747599 None:intergenic 45.0%
! GCTGGCAATGTTCTAAGTCA+TGG + Chr4:7751839-7751858 MsG0480018627.01.T01:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - Chr4:7748185-7748204 None:intergenic 45.0%
! TTCAACTGATGGCTCTACCA+TGG - Chr4:7751359-7751378 None:intergenic 45.0%
!! AACATAGCCATTGGCTTCTC+TGG - Chr4:7751082-7751101 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + Chr4:7748586-7748605 MsG0480018627.01.T01:intron 45.0%
!!! AAGTTTTGGGAGGAGCTAGA+AGG - Chr4:7750292-7750311 None:intergenic 45.0%
!!! AGGGTTTTGAGAGGTTTCGA+GGG - Chr4:7750202-7750221 None:intergenic 45.0%
!!! TCTAGAGGTTTTGGACCTAG+GGG - Chr4:7749716-7749735 None:intergenic 45.0%
AAAGAGAAGAGACCGTAGCG+GGG - Chr4:7749900-7749919 None:intergenic 50.0%
AAGCCCCCTCATACATATCC+TGG + Chr4:7748733-7748752 MsG0480018627.01.T01:intron 50.0%
AAGGACTTAGGGTTGACCCT+TGG + Chr4:7748649-7748668 MsG0480018627.01.T01:intron 50.0%
ACCGCCTTATCCCACTAAGT+GGG + Chr4:7747794-7747813 MsG0480018627.01.T01:intron 50.0%
ACTCATCAAGCGGTTACCTC+TGG - Chr4:7751409-7751428 None:intergenic 50.0%
ACTTTCTGTGAGATCCTCCG+AGG - Chr4:7751122-7751141 None:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG - Chr4:7748118-7748137 None:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - Chr4:7748533-7748552 None:intergenic 50.0%
ATTACCAGAGCCCTTTCCGA+TGG + Chr4:7747644-7747663 MsG0480018627.01.T01:intron 50.0%
CAAAGAGAAGAGACCGTAGC+GGG - Chr4:7749901-7749920 None:intergenic 50.0%
CAAAGCTGGTGAAGCCCTAA+CGG - Chr4:7752967-7752986 None:intergenic 50.0%
CAGATGGCACTGCATGCAAA+GGG - Chr4:7746349-7746368 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG - Chr4:7749309-7749328 None:intergenic 50.0%
CATCCAGTGGGGCTTCAAAA+CGG + Chr4:7752631-7752650 MsG0480018627.01.T01:CDS 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - Chr4:7748469-7748488 None:intergenic 50.0%
CCTTGCGAAATGACATCCAG+TGG + Chr4:7752618-7752637 MsG0480018627.01.T01:CDS 50.0%
CGAAGAAAATGCCAGACGAG+TGG - Chr4:7749112-7749131 None:intergenic 50.0%
CGCAACGCAAACCACAATTG+AGG - Chr4:7752717-7752736 None:intergenic 50.0%
CGGAAAATCGCAGTCAAGTG+TGG + Chr4:7751886-7751905 MsG0480018627.01.T01:intron 50.0%
CTACTTACTTCGACGCGTGA+TGG - Chr4:7748895-7748914 None:intergenic 50.0%
CTGGTAATCCAGAGTTCGGT+CGG - Chr4:7747632-7747651 None:intergenic 50.0%
CTGTAAAGTCATACCGGGAG+AGG - Chr4:7749978-7749997 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr4:7747799-7747818 MsG0480018627.01.T01:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - Chr4:7748784-7748803 None:intergenic 50.0%
GACACAATCATGGCGACTCA+TGG - Chr4:7752128-7752147 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - Chr4:7748418-7748437 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - Chr4:7748534-7748553 None:intergenic 50.0%
GATGCATGCAACCTCAGTTG+TGG + Chr4:7751911-7751930 MsG0480018627.01.T01:intron 50.0%
GCAAAGAGAAGAGACCGTAG+CGG - Chr4:7749902-7749921 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - Chr4:7748785-7748804 None:intergenic 50.0%
GGGGATTTGAATGGGCATGT+AGG - Chr4:7750226-7750245 None:intergenic 50.0%
GGGGTAAAGAATCTTGGTGG+TGG - Chr4:7749697-7749716 None:intergenic 50.0%
GGTTCCCACATCTTCGTGAA+CGG - Chr4:7750696-7750715 None:intergenic 50.0%
GGTTCTACCAGAGAAGCCAA+TGG + Chr4:7751072-7751091 MsG0480018627.01.T01:CDS 50.0%
GTCAGACCGGCAATGTTGTA+TGG - Chr4:7748199-7748218 None:intergenic 50.0%
GTTCCCACATCTTCGTGAAC+GGG - Chr4:7750695-7750714 None:intergenic 50.0%
GTTGAATGGAGAAGAGCCTC+AGG - Chr4:7748280-7748299 None:intergenic 50.0%
TAAACGGGAGGCTAGAGACT+TGG - Chr4:7748518-7748537 None:intergenic 50.0%
TCAGATGGCACTGCATGCAA+AGG - Chr4:7746350-7746369 None:intergenic 50.0%
TCTTCTTACCACGGCGTCTA+CGG + Chr4:7747973-7747992 MsG0480018627.01.T01:intron 50.0%
TGCAGTGCCATCTGAACAAC+AGG + Chr4:7746355-7746374 MsG0480018627.01.T01:CDS 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - Chr4:7748786-7748805 None:intergenic 50.0%
TGGTAATCCAGAGTTCGGTC+GGG - Chr4:7747631-7747650 None:intergenic 50.0%
TTGGCGATAGAGGAATTGGG+TGG - Chr4:7749166-7749185 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - Chr4:7748138-7748157 None:intergenic 50.0%
! AGGCAAGCCTTAGAAGCGTA+CGG - Chr4:7748495-7748514 None:intergenic 50.0%
! AGGGCTTCACCAGCTTTGTA+GGG + Chr4:7752969-7752988 MsG0480018627.01.T01:intron 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - Chr4:7748547-7748566 None:intergenic 50.0%
! CCACTGGATGTCATTTCGCA+AGG - Chr4:7752621-7752640 None:intergenic 50.0%
! CCGTTGACTGAAGAAGAAGC+TGG + Chr4:7751304-7751323 MsG0480018627.01.T01:CDS 50.0%
! CTGTTTGGAACCAATTGCGG+TGG + Chr4:7752055-7752074 MsG0480018627.01.T01:intron 50.0%
! GGCTCTGGTAATCCAGAGTT+CGG - Chr4:7747636-7747655 None:intergenic 50.0%
! TAGGGCTTCACCAGCTTTGT+AGG + Chr4:7752968-7752987 MsG0480018627.01.T01:intron 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - Chr4:7748548-7748567 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + Chr4:7748466-7748485 MsG0480018627.01.T01:intron 50.0%
!!! CATGTAGGGAGGGTTTTGAG+AGG - Chr4:7750211-7750230 None:intergenic 50.0%
!!! GAGGGTTTTGAGAGGTTTCG+AGG - Chr4:7750203-7750222 None:intergenic 50.0%
!!! TTACCGTTTTGAAGCCCCAC+TGG - Chr4:7752637-7752656 None:intergenic 50.0%
AAAGGTTTGCGGCCGTGATC+TGG - Chr4:7751970-7751989 None:intergenic 55.0%
AAGGTTTGCGGCCGTGATCT+GGG - Chr4:7751969-7751988 None:intergenic 55.0%
AATCACAGCGCCACCGCAAT+TGG - Chr4:7752068-7752087 None:intergenic 55.0%
ACATCTTCGTGAACGGGTGC+GGG - Chr4:7750689-7750708 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr4:7747807-7747826 MsG0480018627.01.T01:intron 55.0%
ACTAGTGTCAGGACGCAGGA+TGG - Chr4:7748711-7748730 None:intergenic 55.0%
AGCGCTTATGCACCTCAGGT+AGG - Chr4:7750337-7750356 None:intergenic 55.0%
AGTCTTTGCGCCCACAACTG+AGG - Chr4:7751925-7751944 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr4:7747808-7747827 None:intergenic 55.0%
CACATCTTCGTGAACGGGTG+CGG - Chr4:7750690-7750709 None:intergenic 55.0%
CACCGCCTTATCCCACTAAG+TGG + Chr4:7747793-7747812 MsG0480018627.01.T01:intron 55.0%
CCCCACTTAGTGGGATAAGG+CGG - Chr4:7747798-7747817 None:intergenic 55.0%
CCGCCTTATCCCACTAAGTG+GGG + Chr4:7747795-7747814 MsG0480018627.01.T01:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + Chr4:7748776-7748795 MsG0480018627.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr4:7747801-7747820 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG - Chr4:7748126-7748145 None:intergenic 55.0%
CTAGTGTCAGGACGCAGGAT+GGG - Chr4:7748710-7748729 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - Chr4:7748212-7748231 None:intergenic 55.0%
CTTCTTACCACGGCGTCTAC+GGG + Chr4:7747974-7747993 MsG0480018627.01.T01:intron 55.0%
GCACCCGTTCACGAAGATGT+GGG + Chr4:7750689-7750708 MsG0480018627.01.T01:intron 55.0%
GCGGAAACCGTACGCTTCTA+AGG + Chr4:7748485-7748504 MsG0480018627.01.T01:intron 55.0%
GGAGGTCCTGTTCTTGTACC+TGG + Chr4:7751274-7751293 MsG0480018627.01.T01:CDS 55.0%
GGAGGTTTCAGGCAACCACA+TGG - Chr4:7749809-7749828 None:intergenic 55.0%
GTGCTTCTTCTCCACTCGTC+TGG + Chr4:7749098-7749117 MsG0480018627.01.T01:intron 55.0%
GTTTCCATCGGAAAGGGCTC+TGG - Chr4:7747651-7747670 None:intergenic 55.0%
TAATCCAGAGTTCGGTCGGG+AGG - Chr4:7747628-7747647 None:intergenic 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - Chr4:7749219-7749238 None:intergenic 55.0%
TAGTGTCAGGACGCAGGATG+GGG - Chr4:7748709-7748728 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - Chr4:7748925-7748944 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + Chr4:7748775-7748794 MsG0480018627.01.T01:intron 55.0%
TGGATTACTCGATCCGACCC+CGG - Chr4:7750944-7750963 None:intergenic 55.0%
TGGGTAGTTAAGCCCTCTCC+CGG + Chr4:7749962-7749981 MsG0480018627.01.T01:intron 55.0%
TGGTCTCGGGGAGGTAAATG+CGG - Chr4:7750164-7750183 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr4:7747807-7747826 None:intergenic 55.0%
TGTGTTCAGGATATGCCGGC+TGG + Chr4:7750860-7750879 MsG0480018627.01.T01:intron 55.0%
TTCGACTAGTGTCAGGACGC+AGG - Chr4:7748715-7748734 None:intergenic 55.0%
! CGTGATGGAGCGATATCGGA+CGG - Chr4:7748880-7748899 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - Chr4:7748884-7748903 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - Chr4:7748182-7748201 None:intergenic 55.0%
AACCTGGCTGGAGCAGTCCT+TGG + Chr4:7747592-7747611 MsG0480018627.01.T01:intron 60.0%
ACGGGAGGCTAGAGACTTGG+AGG - Chr4:7748515-7748534 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - Chr4:7748702-7748721 None:intergenic 60.0%
AGGGGGCTTCGACTAGTGTC+AGG - Chr4:7748722-7748741 None:intergenic 60.0%
CATCGAATGGGGCCGCGAAA+CGG + Chr4:7753305-7753324 MsG0480018627.01.T01:CDS 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - Chr4:7748779-7748798 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - Chr4:7748530-7748549 None:intergenic 60.0%
CGCACCCGTTCACGAAGATG+TGG + Chr4:7750688-7750707 MsG0480018627.01.T01:intron 60.0%
CTCGGGGAGGTAAATGCGGA+GGG - Chr4:7750160-7750179 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + Chr4:7748918-7748937 MsG0480018627.01.T01:intron 60.0%
GGAGCGGCACACTCATCAAG+CGG - Chr4:7751419-7751438 None:intergenic 60.0%
GGCTTCTCTGGTAGAACCGG+AGG - Chr4:7751070-7751089 None:intergenic 60.0%
TCTCGGGGAGGTAAATGCGG+AGG - Chr4:7750161-7750180 None:intergenic 60.0%
TTCACCTCCCGACCGAACTC+TGG + Chr4:7747621-7747640 MsG0480018627.01.T01:intron 60.0%
TTCGGTCGGGAGGTGAAGTC+TGG - Chr4:7747618-7747637 None:intergenic 60.0%
! AGAGGTTTCGAGGGCGTGCA+TGG - Chr4:7750193-7750212 None:intergenic 60.0%
! AGGTTTCGAGGGCGTGCATG+GGG - Chr4:7750191-7750210 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - Chr4:7748544-7748563 None:intergenic 60.0%
! GAGGTTTCGAGGGCGTGCAT+GGG - Chr4:7750192-7750211 None:intergenic 60.0%
! GTGCATGGGGGGTATGGTCT+CGG - Chr4:7750178-7750197 None:intergenic 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - Chr4:7749267-7749286 None:intergenic 60.0%
! TGCATGGGGGGTATGGTCTC+GGG - Chr4:7750177-7750196 None:intergenic 60.0%
ACATCCAGGCGGCGATGCAG+CGG + Chr4:7750733-7750752 MsG0480018627.01.T01:intron 65.0%
CGGGAGGTGAAGTCTGGCCA+AGG - Chr4:7747612-7747631 None:intergenic 65.0%
GAGAAGACCCGTAGACGCCG+TGG - Chr4:7747984-7748003 None:intergenic 65.0%
GGGCTCCGCGAATCAAGTGG+TGG - Chr4:7749880-7749899 None:intergenic 65.0%
TGATTCGCGGAGCCCCGCTA+CGG + Chr4:7749885-7749904 MsG0480018627.01.T01:intron 65.0%
! GCATGGGGGGTATGGTCTCG+GGG - Chr4:7750176-7750195 None:intergenic 65.0%
! GGTTTCGAGGGCGTGCATGG+GGG - Chr4:7750190-7750209 None:intergenic 65.0%
! GTTTCGAGGGCGTGCATGGG+GGG - Chr4:7750189-7750208 None:intergenic 65.0%
GCGGGGCTCCGCGAATCAAG+TGG - Chr4:7749883-7749902 None:intergenic 70.0%
GGCCAAGGACTGCTCCAGCC+AGG - Chr4:7747597-7747616 None:intergenic 70.0%
! GAGGGCGTGCATGGGGGGTA+TGG - Chr4:7750184-7750203 None:intergenic 70.0%
! TGGGGGGTATGGTCTCGGGG+AGG - Chr4:7750173-7750192 None:intergenic 70.0%
! AGGGCCGCTGCATCGCCGCC+TGG - Chr4:7750740-7750759 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 7746102 7753690 7746102 ID=MsG0480018627.01;Name=MsG0480018627.01
Chr4 mRNA 7746102 7753690 7746102 ID=MsG0480018627.01.T01;Parent=MsG0480018627.01;Name=MsG0480018627.01.T01;_AED=0.49;_eAED=0.49;_QI=65|1|1|1|0.6|0.5|6|328|455
Chr4 exon 7746102 7746376 7746102 ID=MsG0480018627.01.T01:exon:2471;Parent=MsG0480018627.01.T01
Chr4 exon 7747152 7747203 7747152 ID=MsG0480018627.01.T01:exon:2472;Parent=MsG0480018627.01.T01
Chr4 exon 7747296 7747456 7747296 ID=MsG0480018627.01.T01:exon:2473;Parent=MsG0480018627.01.T01
Chr4 exon 7750869 7751411 7750869 ID=MsG0480018627.01.T01:exon:2474;Parent=MsG0480018627.01.T01
Chr4 exon 7752473 7752652 7752473 ID=MsG0480018627.01.T01:exon:2475;Parent=MsG0480018627.01.T01
Chr4 exon 7753141 7753690 7753141 ID=MsG0480018627.01.T01:exon:2476;Parent=MsG0480018627.01.T01
Chr4 five_prime_UTR 7746102 7746166 7746102 ID=MsG0480018627.01.T01:five_prime_utr;Parent=MsG0480018627.01.T01
Chr4 CDS 7746167 7746376 7746167 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 CDS 7747152 7747203 7747152 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 CDS 7747296 7747456 7747296 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 CDS 7750869 7751411 7750869 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 CDS 7752473 7752652 7752473 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 CDS 7753141 7753362 7753141 ID=MsG0480018627.01.T01:cds;Parent=MsG0480018627.01.T01
Chr4 three_prime_UTR 7753363 7753690 7753363 ID=MsG0480018627.01.T01:three_prime_utr;Parent=MsG0480018627.01.T01
Gene Sequence

>MsG0480018627.01.T01

ATGAAAACCTTCACAAGTTTTAGTTCTAAGCCTATAGTTCATAAGCTAGGATCTTTGTCTCCTAGTGTTGCTTTTCATGTTTCTGATAAACCCTTTTCTTGTTTCACTCTTTCCTTCAGAAATGAACAAAAAAGTTCCATTTTTTGTCTCTTGAAACATGTACAAAACAAGGGTGTTTGCCCTTTGCATGCAGTGCCATCTGAACAACAGGAGGTAGAGTTAGAAACTGTTGAGCCTCAAGTTCAACAAAGCGAACAAACAAATGACTCGAAGTTCGTCCGTGTTGAGTTTCAGCTACTAAAAGATTGCGACTTTGGAGAACAGTTTCTAATAGTTGGAGATGATCCTAAACTTGGTTTATGGAACCCTTTAGATGCATTACCATTGACATGGTCTGATGGTCATATATGGACTGTTGAGCTGGATATGCCGGCTGGAAAATCAATCCTATACAAGTTTATACTAAAAGGAAAAGAAGGTGATATTATTTGGCAACCGGGGTCGGATCGAGTAATCCAAACATGGGAAACTATGAACAGAATAATTGTTCTTGAGGATTGGGAGAATGCAGAACTTCAGAAAATAATAGAGGAGGATACACTTTCTCAACCAAATGAAGAACCTCCGGTTCTACCAGAGAAGCCAATGGCTATGTTTGCCGAAAATATAGGTTCCTCGGAGGATCTCACAGAAAGTAAAAGTCAAACAACGAATAAAACGAATGTTGTTCGAAAGAGTGAAGAATCTGAAGATGGTTTTCAAAATGATCCTGCAGCGTTAAAAAATAAAAAAGGGACGATTGTGGAGGGAAGCTTAATCGATTTTGAAGGAGGTCCTGTTCTTGTACCTGGCTTAATACCGTTGACTGAAGAAGAAGCTGGTCCAAGTGAAGTTGTTGAAGAAGAAAAGACCATGGTAGAGCCATCAGTTGAACCTTTTGAAACTCAGGATCAGAATATACCAGAGTTAAGCAAGGAGCAAGAATCAAATGATGAAACTGCACAAGAGATAAGTTCAACAATCAATGATGATCTAAATTTGCATGAAGAACAGTTTCATTTGGCATCAACAATGGAAGAAGGGTCAAACTCAGAGCCAATTCATGGTAATGCCTTGCGAAATGACATCCAGTGGGGCTTCAAAACGTTGAGCAAGGATCAAGAATCAGATGACGACGCACCACAAGAGATAAGTACAAGTACTACAATCAATGAGGAACTGAATTCACATGAAGAGCAGTTTCATTTGGCACCAACAATGGAAGAAGAATCTAACTCAGAGCCAATTCATGGTAATGCCTTGCGAAATGACATCGAATGGGGCCGCGAAACGGTAAAGAAGTTTCTAACAAAATTTGGATTGCTTTGA
Protein sequence

>MsG0480018627.01.T01

MKTFTSFSSKPIVHKLGSLSPSVAFHVSDKPFSCFTLSFRNEQKSSIFCLLKHVQNKGVCPLHAVPSEQQEVELETVEPQVQQSEQTNDSKFVRVEFQLLKDCDFGEQFLIVGDDPKLGLWNPLDALPLTWSDGHIWTVELDMPAGKSILYKFILKGKEGDIIWQPGSDRVIQTWETMNRIIVLEDWENAELQKIIEEDTLSQPNEEPPVLPEKPMAMFAENIGSSEDLTESKSQTTNKTNVVRKSEESEDGFQNDPAALKNKKGTIVEGSLIDFEGGPVLVPGLIPLTEEEAGPSEVVEEEKTMVEPSVEPFETQDQNIPELSKEQESNDETAQEISSTINDDLNLHEEQFHLASTMEEGSNSEPIHGNALRNDIQWGFKTLSKDQESDDDAPQEISTSTTINEELNSHEEQFHLAPTMEEESNSEPIHGNALRNDIEWGRETVKKFLTKFGLL*