Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027767.01.T01 | XP_013455195.1 | 94.516 | 310 | 13 | 2 | 1 | 307 | 110 | 418 | 0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027767.01.T01 | Q6R567 | 46.667 | 105 | 45 | 3 | 6 | 100 | 28 | 131 | 3.14E-22 | 96.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027767.01.T01 | A0A072UIE9 | 94.516 | 310 | 13 | 2 | 1 | 307 | 110 | 418 | 0.0 | 534 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0580027767.01 | 0.818747 | 1.668222e-52 | 1.259414e-49 |
| MsG0080048874.01 | MsG0580027767.01 | 0.824915 | 6.231294e-54 | 5.596132e-51 |
| MsG0180000145.01 | MsG0580027767.01 | 0.809518 | 1.818377e-50 | 1.069904e-47 |
| MsG0180000470.01 | MsG0580027767.01 | 0.850971 | 1.202608e-60 | 2.397307e-57 |
| MsG0180000550.01 | MsG0580027767.01 | 0.803065 | 4.164275e-49 | 2.072579e-46 |
| MsG0180000650.01 | MsG0580027767.01 | 0.807259 | 5.517133e-50 | 3.058691e-47 |
| MsG0180000703.01 | MsG0580027767.01 | 0.803284 | 3.751596e-49 | 1.877756e-46 |
| MsG0180001063.01 | MsG0580027767.01 | 0.826150 | 3.177398e-54 | 2.955455e-51 |
| MsG0180001971.01 | MsG0580027767.01 | 0.808807 | 2.583217e-50 | 1.491270e-47 |
| MsG0180002008.01 | MsG0580027767.01 | 0.810035 | 1.407699e-50 | 8.396780e-48 |
| MsG0180002282.01 | MsG0580027767.01 | 0.860866 | 1.531719e-63 | 4.249166e-60 |
| MsG0180002563.01 | MsG0580027767.01 | 0.805983 | 1.025815e-49 | 5.503832e-47 |
| MsG0180002842.01 | MsG0580027767.01 | 0.846933 | 1.590566e-59 | 2.781564e-56 |
| MsG0180003669.01 | MsG0580027767.01 | 0.801201 | 1.006940e-48 | 4.780100e-46 |
| MsG0180003673.01 | MsG0580027767.01 | 0.815214 | 1.036923e-51 | 7.104678e-49 |
| MsG0180003686.01 | MsG0580027767.01 | 0.822425 | 2.384837e-53 | 1.995510e-50 |
| MsG0180004085.01 | MsG0580027767.01 | 0.818356 | 2.045715e-52 | 1.527924e-49 |
| MsG0180004264.01 | MsG0580027767.01 | 0.810868 | 9.306739e-51 | 5.674974e-48 |
| MsG0180004465.01 | MsG0580027767.01 | 0.817677 | 2.912575e-52 | 2.135024e-49 |
| MsG0180004996.01 | MsG0580027767.01 | 0.805535 | 1.273914e-49 | 6.756292e-47 |
| MsG0180005050.01 | MsG0580027767.01 | 0.833506 | 5.128423e-56 | 5.917950e-53 |
| MsG0180005185.01 | MsG0580027767.01 | 0.843654 | 1.227152e-58 | 1.933211e-55 |
| MsG0180005960.01 | MsG0580027767.01 | 0.802860 | 4.591639e-49 | 2.273498e-46 |
| MsG0280006299.01 | MsG0580027767.01 | 0.809107 | 2.228485e-50 | 1.296909e-47 |
| MsG0280010698.01 | MsG0580027767.01 | 0.815566 | 8.655880e-52 | 5.988910e-49 |
| MsG0280010722.01 | MsG0580027767.01 | 0.852996 | 3.198390e-61 | 6.808087e-58 |
| MsG0280011032.01 | MsG0580027767.01 | 0.834271 | 3.301161e-56 | 3.898117e-53 |
| MsG0280011163.01 | MsG0580027767.01 | 0.804736 | 1.872108e-49 | 9.727904e-47 |
| MsG0380011609.01 | MsG0580027767.01 | 0.814227 | 1.715062e-51 | 1.144220e-48 |
| MsG0380012009.01 | MsG0580027767.01 | 0.802341 | 5.873270e-49 | 2.870035e-46 |
| MsG0380012085.01 | MsG0580027767.01 | 0.827065 | 1.921554e-54 | 1.834948e-51 |
| MsG0380012091.01 | MsG0580027767.01 | 0.810239 | 1.272514e-50 | 7.630389e-48 |
| MsG0380012330.01 | MsG0580027767.01 | 0.807442 | 5.045156e-50 | 2.810332e-47 |
| MsG0380012460.01 | MsG0580027767.01 | 0.803115 | 4.065556e-49 | 2.026101e-46 |
| MsG0380014239.01 | MsG0580027767.01 | 0.803912 | 2.779021e-49 | 1.413744e-46 |
| MsG0380014537.01 | MsG0580027767.01 | 0.801608 | 8.309440e-49 | 3.985234e-46 |
| MsG0380014770.01 | MsG0580027767.01 | 0.817891 | 2.605877e-52 | 1.921422e-49 |
| MsG0480018465.01 | MsG0580027767.01 | 0.856117 | 3.995393e-62 | 9.434514e-59 |
| MsG0480018627.01 | MsG0580027767.01 | 0.818799 | 1.622923e-52 | 1.226951e-49 |
| MsG0480018659.01 | MsG0580027767.01 | 0.812453 | 4.207624e-51 | 2.676543e-48 |
| MsG0480018660.01 | MsG0580027767.01 | 0.817796 | 2.738830e-52 | 2.014261e-49 |
| MsG0480018883.01 | MsG0580027767.01 | 0.834616 | 2.704558e-56 | 3.226651e-53 |
| MsG0480019970.01 | MsG0580027767.01 | 0.814882 | 1.228194e-51 | 8.340146e-49 |
| MsG0480020002.01 | MsG0580027767.01 | 0.813910 | 2.014775e-51 | 1.332632e-48 |
| MsG0480020634.01 | MsG0580027767.01 | 0.800881 | 1.170574e-48 | 5.512340e-46 |
| MsG0480021274.01 | MsG0580027767.01 | 0.819268 | 1.269636e-52 | 9.723917e-50 |
| MsG0480021558.01 | MsG0580027767.01 | 0.804614 | 1.985195e-49 | 1.028214e-46 |
| MsG0480021918.01 | MsG0580027767.01 | 0.815264 | 1.010536e-51 | 6.933784e-49 |
| MsG0480021925.01 | MsG0580027767.01 | 0.828590 | 8.259465e-55 | 8.245801e-52 |
| MsG0480021948.01 | MsG0580027767.01 | 0.809934 | 1.480230e-50 | 8.805776e-48 |
| MsG0480022068.01 | MsG0580027767.01 | 0.833032 | 6.730048e-56 | 7.657320e-53 |
| MsG0480022213.01 | MsG0580027767.01 | -0.830194 | 3.369385e-55 | 3.525135e-52 |
| MsG0480022259.01 | MsG0580027767.01 | 0.861782 | 8.053254e-64 | 2.304859e-60 |
| MsG0480022262.01 | MsG0580027767.01 | 0.867839 | 1.017962e-65 | 3.604573e-62 |
| MsG0480022361.01 | MsG0580027767.01 | 0.806738 | 7.111286e-50 | 3.889554e-47 |
| MsG0480022551.01 | MsG0580027767.01 | 0.802372 | 5.787650e-49 | 2.830477e-46 |
| MsG0480022615.01 | MsG0580027767.01 | -0.823263 | 1.521904e-53 | 1.303909e-50 |
| MsG0480022951.01 | MsG0580027767.01 | 0.807532 | 4.827590e-50 | 2.695441e-47 |
| MsG0480023248.01 | MsG0580027767.01 | 0.811569 | 6.557236e-51 | 4.072993e-48 |
| MsG0480023251.01 | MsG0580027767.01 | 0.835051 | 2.100757e-56 | 2.539185e-53 |
| MsG0480023488.01 | MsG0580027767.01 | 0.843858 | 1.082164e-58 | 1.715743e-55 |
| MsG0480023489.01 | MsG0580027767.01 | 0.807747 | 4.345314e-50 | 2.439863e-47 |
| MsG0480023654.01 | MsG0580027767.01 | 0.813073 | 3.077827e-51 | 1.990002e-48 |
| MsG0480023707.01 | MsG0580027767.01 | 0.802125 | 6.505967e-49 | 3.161595e-46 |
| MsG0580024363.01 | MsG0580027767.01 | -0.827968 | 1.166743e-54 | 1.143968e-51 |
| MsG0580024552.01 | MsG0580027767.01 | 0.835656 | 1.477919e-56 | 1.819076e-53 |
| MsG0580024781.01 | MsG0580027767.01 | 0.813725 | 2.213171e-51 | 1.456609e-48 |
| MsG0580025638.01 | MsG0580027767.01 | 0.804703 | 1.901996e-49 | 9.874048e-47 |
| MsG0580025758.01 | MsG0580027767.01 | 0.802278 | 6.052756e-49 | 2.952906e-46 |
| MsG0380014981.01 | MsG0580027767.01 | 0.800867 | 1.178077e-48 | 5.545573e-46 |
| MsG0380015034.01 | MsG0580027767.01 | 0.827258 | 1.727987e-54 | 1.659584e-51 |
| MsG0380015039.01 | MsG0580027767.01 | 0.815346 | 9.690251e-52 | 6.664177e-49 |
| MsG0380015555.01 | MsG0580027767.01 | 0.804646 | 1.955156e-49 | 1.013496e-46 |
| MsG0380015566.01 | MsG0580027767.01 | 0.818323 | 2.080947e-52 | 1.552725e-49 |
| MsG0380015589.01 | MsG0580027767.01 | 0.827749 | 1.317267e-54 | 1.283200e-51 |
| MsG0380016285.01 | MsG0580027767.01 | 0.847815 | 9.108790e-60 | 1.638580e-56 |
| MsG0380016475.01 | MsG0580027767.01 | 0.809599 | 1.747651e-50 | 1.030542e-47 |
| MsG0380017048.01 | MsG0580027767.01 | 0.809249 | 2.077359e-50 | 1.213577e-47 |
| MsG0380017140.01 | MsG0580027767.01 | 0.810671 | 1.026563e-50 | 6.226755e-48 |
| MsG0380017220.01 | MsG0580027767.01 | 0.817458 | 3.263409e-52 | 2.378018e-49 |
| MsG0380017233.01 | MsG0580027767.01 | 0.809982 | 1.445327e-50 | 8.609186e-48 |
| MsG0380017543.01 | MsG0580027767.01 | 0.817910 | 2.580400e-52 | 1.903621e-49 |
| MsG0380017551.01 | MsG0580027767.01 | -0.818758 | 1.658578e-52 | 1.252535e-49 |
| MsG0380017680.01 | MsG0580027767.01 | 0.802731 | 4.880817e-49 | 2.408871e-46 |
| MsG0480018183.01 | MsG0580027767.01 | 0.809478 | 1.855452e-50 | 1.090519e-47 |
| MsG0480018236.01 | MsG0580027767.01 | 0.844455 | 7.482263e-59 | 1.208523e-55 |
| MsG0580026086.01 | MsG0580027767.01 | 0.810804 | 9.607817e-51 | 5.848317e-48 |
| MsG0580026340.01 | MsG0580027767.01 | 0.807547 | 4.792901e-50 | 2.677080e-47 |
| MsG0580027679.01 | MsG0580027767.01 | 0.818236 | 2.178351e-52 | 1.621393e-49 |
| MsG0580027688.01 | MsG0580027767.01 | 0.808703 | 2.718863e-50 | 1.565324e-47 |
| MsG0580027745.01 | MsG0580027767.01 | 0.809811 | 1.573570e-50 | 9.330850e-48 |
| MsG0580027766.01 | MsG0580027767.01 | 0.893537 | 5.731726e-75 | 5.482743e-71 |
| MsG0580027767.01 | MsG0580027922.01 | 0.840077 | 1.080395e-57 | 1.521974e-54 |
| MsG0580027767.01 | MsG0580028990.01 | 0.803283 | 3.754290e-49 | 1.879033e-46 |
| MsG0580027767.01 | MsG0580029704.01 | 0.801854 | 7.398626e-49 | 3.570792e-46 |
| MsG0580027767.01 | MsG0580029999.01 | -0.807409 | 5.126995e-50 | 2.853567e-47 |
| MsG0580027767.01 | MsG0680030316.01 | 0.804202 | 2.418696e-49 | 1.239511e-46 |
| MsG0580027767.01 | MsG0680030880.01 | 0.815536 | 8.790863e-52 | 6.077312e-49 |
| MsG0580027767.01 | MsG0680031114.01 | 0.836354 | 9.831221e-57 | 1.235929e-53 |
| MsG0580027767.01 | MsG0680031154.01 | 0.810131 | 1.342246e-50 | 8.025918e-48 |
| MsG0580027767.01 | MsG0680032157.01 | 0.814549 | 1.455839e-51 | 9.798112e-49 |
| MsG0580027767.01 | MsG0680032801.01 | 0.830625 | 2.643599e-55 | 2.800462e-52 |
| MsG0580027767.01 | MsG0680034464.01 | 0.823324 | 1.472364e-53 | 1.263626e-50 |
| MsG0580027767.01 | MsG0680034466.01 | 0.805487 | 1.303934e-49 | 6.907161e-47 |
| MsG0580027767.01 | MsG0680034739.01 | 0.812161 | 4.873536e-51 | 3.075687e-48 |
| MsG0580027767.01 | MsG0680035694.01 | 0.839033 | 2.018180e-57 | 2.752556e-54 |
| MsG0580027767.01 | MsG0680035736.01 | 0.800342 | 1.507453e-48 | 7.002319e-46 |
| MsG0580027767.01 | MsG0680035828.01 | 0.840896 | 6.596298e-58 | 9.530635e-55 |
| MsG0580027767.01 | MsG0680035873.01 | 0.815283 | 1.000813e-51 | 6.870966e-49 |
| MsG0580027767.01 | MsG0680035909.01 | 0.842937 | 1.905782e-58 | 2.934668e-55 |
| MsG0580027767.01 | MsG0780036018.01 | 0.830826 | 2.359772e-55 | 2.514838e-52 |
| MsG0580027767.01 | MsG0780036201.01 | 0.813728 | 2.210016e-51 | 1.454670e-48 |
| MsG0580027767.01 | MsG0780037054.01 | 0.809779 | 1.598220e-50 | 9.469515e-48 |
| MsG0580027767.01 | MsG0780037146.01 | 0.809945 | 1.471937e-50 | 8.758870e-48 |
| MsG0580027767.01 | MsG0780037592.01 | 0.839354 | 1.665914e-57 | 2.294842e-54 |
| MsG0580027767.01 | MsG0780037845.01 | 0.841024 | 6.106979e-58 | 8.857492e-55 |
| MsG0580027767.01 | MsG0780038439.01 | 0.840079 | 1.079077e-57 | 1.520234e-54 |
| MsG0580027767.01 | MsG0780039144.01 | 0.805166 | 1.522181e-49 | 7.997022e-47 |
| MsG0580027767.01 | MsG0780039178.01 | 0.808576 | 2.893844e-50 | 1.660582e-47 |
| MsG0580027767.01 | MsG0780039252.01 | 0.816189 | 6.288077e-52 | 4.425418e-49 |
| MsG0580027767.01 | MsG0780039832.01 | 0.810071 | 1.382824e-50 | 8.255758e-48 |
| MsG0580027767.01 | MsG0780039867.01 | -0.820969 | 5.177613e-53 | 4.158103e-50 |
| MsG0580027767.01 | MsG0780040576.01 | -0.828613 | 8.155941e-55 | 8.148084e-52 |
| MsG0580027767.01 | MsG0780040596.01 | 0.813167 | 2.936052e-51 | 1.903109e-48 |
| MsG0580027767.01 | MsG0780040788.01 | 0.809346 | 1.980213e-50 | 1.159837e-47 |
| MsG0580027767.01 | MsG0780041456.01 | 0.813787 | 2.144983e-51 | 1.414051e-48 |
| MsG0580027767.01 | MsG0880041836.01 | 0.829979 | 3.801059e-55 | 3.952027e-52 |
| MsG0580027767.01 | MsG0880042161.01 | 0.835686 | 1.452106e-56 | 1.789082e-53 |
| MsG0580027767.01 | MsG0880042301.01 | 0.832188 | 1.090326e-55 | 1.209631e-52 |
| MsG0580027767.01 | MsG0880042518.01 | 0.813636 | 2.315791e-51 | 1.520415e-48 |
| MsG0580027767.01 | MsG0880042520.01 | 0.820273 | 7.483501e-53 | 5.894302e-50 |
| MsG0580027767.01 | MsG0880042698.01 | 0.849091 | 4.038345e-60 | 7.570554e-57 |
| MsG0580027767.01 | MsG0880043479.01 | 0.801421 | 9.077856e-49 | 4.333339e-46 |
| MsG0580027767.01 | MsG0880043937.01 | 0.800413 | 1.458217e-48 | 6.785754e-46 |
| MsG0580027767.01 | MsG0880043941.01 | 0.823115 | 1.648101e-53 | 1.406262e-50 |
| MsG0580027767.01 | MsG0880044416.01 | 0.807797 | 4.241281e-50 | 2.384496e-47 |
| MsG0580027767.01 | MsG0880044554.01 | 0.811288 | 7.544168e-51 | 4.651317e-48 |
| MsG0580027767.01 | MsG0880044573.01 | 0.826330 | 2.877824e-54 | 2.690559e-51 |
| MsG0580027767.01 | MsG0880044574.01 | 0.848650 | 5.353919e-60 | 9.892724e-57 |
| MsG0580027767.01 | MsG0880045111.01 | 0.833614 | 4.818883e-56 | 5.578588e-53 |
| MsG0580027767.01 | MsG0880045371.01 | 0.811476 | 6.870257e-51 | 4.257051e-48 |
| MsG0580027767.01 | MsG0880045372.01 | 0.800370 | 1.488064e-48 | 6.917038e-46 |
| MsG0580027767.01 | MsG0880045736.01 | 0.819709 | 1.007391e-52 | 7.810971e-50 |
| MsG0580027767.01 | MsG0880045816.01 | 0.809213 | 2.114080e-50 | 1.233855e-47 |
| MsG0580027767.01 | MsG0880045895.01 | 0.817274 | 3.590606e-52 | 2.603001e-49 |
| MsG0580027767.01 | MsG0880045937.01 | 0.834337 | 3.176781e-56 | 3.758740e-53 |
| MsG0580027767.01 | MsG0880046020.01 | 0.817760 | 2.789484e-52 | 2.049536e-49 |
| MsG0580027767.01 | MsG0880046425.01 | 0.820527 | 6.542586e-53 | 5.189419e-50 |
| MsG0580027767.01 | MsG0880046479.01 | 0.801295 | 9.629875e-49 | 4.582419e-46 |
| MsG0580027767.01 | MsG0880047294.01 | 0.808734 | 2.677794e-50 | 1.542870e-47 |
| MsG0280006588.01 | MsG0580027767.01 | 0.803378 | 3.587488e-49 | 1.799950e-46 |
| MsG0280006770.01 | MsG0580027767.01 | 0.817623 | 2.995642e-52 | 2.192619e-49 |
| MsG0280007023.01 | MsG0580027767.01 | 0.833850 | 4.209013e-56 | 4.907789e-53 |
| MsG0280007064.01 | MsG0580027767.01 | 0.800446 | 1.435571e-48 | 6.685777e-46 |
| MsG0280007072.01 | MsG0580027767.01 | 0.815568 | 8.650293e-52 | 5.985270e-49 |
| MsG0280007864.01 | MsG0580027767.01 | -0.810754 | 9.849404e-51 | 5.987583e-48 |
| MsG0280008112.01 | MsG0580027767.01 | 0.819113 | 1.377228e-52 | 1.050310e-49 |
| MsG0280008515.01 | MsG0580027767.01 | 0.808809 | 2.580015e-50 | 1.489528e-47 |
| MsG0280008615.01 | MsG0580027767.01 | 0.811861 | 5.664520e-51 | 3.545733e-48 |
| MsG0280008894.01 | MsG0580027767.01 | 0.866478 | 2.769106e-65 | 9.346167e-62 |
| MsG0280009748.01 | MsG0580027767.01 | 0.834296 | 3.253977e-56 | 3.845326e-53 |
| MsG0280010443.01 | MsG0580027767.01 | 0.822588 | 2.186134e-53 | 1.837834e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027767.01.T01 | MTR_4g029440 | 94.516 | 310 | 13 | 2 | 1 | 307 | 116 | 424 | 0.0 | 534 |
| MsG0580027767.01.T01 | MTR_4g029440 | 94.516 | 310 | 13 | 2 | 1 | 307 | 110 | 418 | 0.0 | 534 |
| MsG0580027767.01.T01 | MTR_7g093390 | 38.351 | 279 | 138 | 8 | 14 | 265 | 167 | 438 | 7.28e-49 | 169 |
| MsG0580027767.01.T01 | MTR_2g061230 | 56.489 | 131 | 54 | 2 | 15 | 145 | 105 | 232 | 2.18e-44 | 152 |
| MsG0580027767.01.T01 | MTR_1g054280 | 56.044 | 91 | 38 | 2 | 12 | 101 | 71 | 160 | 5.01e-30 | 115 |
| MsG0580027767.01.T01 | MTR_1g054260 | 48.092 | 131 | 46 | 6 | 2 | 117 | 73 | 196 | 1.63e-29 | 112 |
| MsG0580027767.01.T01 | MTR_1g054210 | 52.427 | 103 | 45 | 3 | 2 | 103 | 109 | 208 | 2.48e-28 | 109 |
| MsG0580027767.01.T01 | MTR_1g054465 | 45.926 | 135 | 48 | 7 | 10 | 124 | 45 | 174 | 3.62e-28 | 108 |
| MsG0580027767.01.T01 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 15 | 100 | 31 | 120 | 1.31e-25 | 100 |
| MsG0580027767.01.T01 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 15 | 100 | 28 | 117 | 1.52e-25 | 100 |
| MsG0580027767.01.T01 | MTR_2g090325 | 46.988 | 83 | 38 | 1 | 17 | 99 | 18 | 94 | 8.14e-24 | 97.1 |
| MsG0580027767.01.T01 | MTR_1g021895 | 45.055 | 91 | 48 | 2 | 13 | 103 | 27 | 115 | 1.94e-23 | 96.7 |
| MsG0580027767.01.T01 | MTR_5g019300 | 45.977 | 87 | 46 | 1 | 17 | 103 | 35 | 120 | 2.06e-23 | 96.7 |
| MsG0580027767.01.T01 | MTR_8g465910 | 45.652 | 92 | 42 | 2 | 17 | 100 | 44 | 135 | 5.04e-22 | 93.2 |
| MsG0580027767.01.T01 | MTR_2g090295 | 41.837 | 98 | 48 | 2 | 9 | 99 | 34 | 129 | 5.93e-21 | 90.1 |
| MsG0580027767.01.T01 | MTR_2g013550 | 37.069 | 116 | 56 | 3 | 1 | 104 | 11 | 121 | 7.29e-21 | 89.7 |
| MsG0580027767.01.T01 | MTR_4g088870 | 38.679 | 106 | 56 | 2 | 10 | 106 | 25 | 130 | 1.32e-20 | 88.2 |
| MsG0580027767.01.T01 | MTR_4g088875 | 36.449 | 107 | 58 | 2 | 8 | 104 | 22 | 128 | 7.09e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027767.01.T01 | AT2G44410 | 50.000 | 128 | 59 | 1 | 8 | 130 | 114 | 241 | 6.21e-41 | 147 |
| MsG0580027767.01.T01 | AT3G58030 | 52.101 | 119 | 50 | 4 | 12 | 129 | 132 | 244 | 1.28e-35 | 134 |
| MsG0580027767.01.T01 | AT3G58030 | 52.101 | 119 | 50 | 4 | 12 | 129 | 132 | 244 | 1.28e-35 | 134 |
| MsG0580027767.01.T01 | AT3G58030 | 52.101 | 119 | 50 | 4 | 12 | 129 | 132 | 244 | 1.28e-35 | 134 |
| MsG0580027767.01.T01 | AT3G58030 | 52.101 | 119 | 50 | 4 | 12 | 129 | 132 | 244 | 1.28e-35 | 134 |
| MsG0580027767.01.T01 | AT2G42030 | 42.969 | 128 | 61 | 3 | 12 | 135 | 134 | 253 | 7.38e-29 | 115 |
| MsG0580027767.01.T01 | AT1G74990 | 40.625 | 128 | 67 | 2 | 10 | 129 | 10 | 136 | 1.02e-28 | 107 |
| MsG0580027767.01.T01 | AT1G19310 | 48.276 | 87 | 44 | 1 | 17 | 103 | 21 | 106 | 8.54e-25 | 100 |
| MsG0580027767.01.T01 | AT2G23780 | 45.977 | 87 | 46 | 1 | 17 | 103 | 26 | 111 | 2.56e-23 | 96.3 |
| MsG0580027767.01.T01 | AT2G23780 | 45.977 | 87 | 46 | 1 | 17 | 103 | 26 | 111 | 2.56e-23 | 96.3 |
| MsG0580027767.01.T01 | AT2G23780 | 45.977 | 87 | 46 | 1 | 17 | 103 | 26 | 111 | 2.56e-23 | 96.3 |
| MsG0580027767.01.T01 | AT4G28270 | 41.964 | 112 | 45 | 3 | 1 | 99 | 3 | 107 | 3.27e-23 | 95.1 |
| MsG0580027767.01.T01 | AT4G27470 | 35.200 | 125 | 64 | 3 | 17 | 128 | 42 | 162 | 1.67e-19 | 86.3 |
| MsG0580027767.01.T01 | AT4G03510 | 43.956 | 91 | 38 | 3 | 17 | 99 | 46 | 131 | 9.32e-19 | 84.3 |
| MsG0580027767.01.T01 | AT4G03510 | 43.956 | 91 | 38 | 3 | 17 | 99 | 46 | 131 | 9.32e-19 | 84.3 |
| MsG0580027767.01.T01 | AT4G03510 | 43.956 | 91 | 38 | 3 | 17 | 99 | 46 | 131 | 9.32e-19 | 84.3 |
| MsG0580027767.01.T01 | AT4G03510 | 43.956 | 91 | 38 | 3 | 17 | 99 | 46 | 131 | 9.32e-19 | 84.3 |
Find 72 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGGTATTATTCCAATTTA+TGG | 0.104536 | 5:-68251353 | MsG0580027767.01.T01:CDS |
| CCATTTCCATGTCCATAAAT+TGG | 0.194274 | 5:+68251341 | None:intergenic |
| TTATCAACATTCCTACTTAA+AGG | 0.205288 | 5:+68250774 | None:intergenic |
| CTCTCAGGTGTGGTACTATT+AGG | 0.243365 | 5:+68251128 | None:intergenic |
| CATAACCGAATTGGTGGATT+TGG | 0.278139 | 5:-68251173 | MsG0580027767.01.T01:CDS |
| TCTCAGGTGTGGTACTATTA+GGG | 0.289538 | 5:+68251129 | None:intergenic |
| GTTGATAATGTTGCTGTTGC+AGG | 0.300831 | 5:-68250759 | MsG0580027767.01.T01:CDS |
| CTTCTATTGTCCAAAGTATT+CGG | 0.320027 | 5:-68251202 | MsG0580027767.01.T01:CDS |
| CTTTGATTGTAATATTTGTT+TGG | 0.349272 | 5:-68251501 | MsG0580027767.01.T01:CDS |
| TATGAAACCGCCGAATACTT+TGG | 0.373232 | 5:+68251192 | None:intergenic |
| TTCTGCTGAAAGATTAGTTC+AGG | 0.376998 | 5:-68250967 | MsG0580027767.01.T01:CDS |
| CGGCGGTTTCATAACCGAAT+TGG | 0.383576 | 5:-68251182 | MsG0580027767.01.T01:CDS |
| CCAATTTATGGACATGGAAA+TGG | 0.384021 | 5:-68251341 | MsG0580027767.01.T01:CDS |
| ACATTCCTTTGCTTTCGAAT+AGG | 0.388726 | 5:+68251403 | None:intergenic |
| GACCATTGATATATGATTCA+AGG | 0.415979 | 5:+68250943 | None:intergenic |
| TGAACATGGTGGTTCTCAAC+AGG | 0.416867 | 5:-68251060 | MsG0580027767.01.T01:CDS |
| AGCTGCTGCAGCTACAGAAT+TGG | 0.416919 | 5:+68250806 | None:intergenic |
| CTTCTCTTTCTCCTTTAAGT+AGG | 0.422331 | 5:-68250785 | MsG0580027767.01.T01:CDS |
| GTGGTTCTCAACAGGTTTCA+AGG | 0.428291 | 5:-68251052 | MsG0580027767.01.T01:CDS |
| GTTACCTCCCCTTTACAAAC+AGG | 0.438464 | 5:+68251380 | None:intergenic |
| GTCTGCGTGCGAGACTGAAC+AGG | 0.444476 | 5:+68251092 | None:intergenic |
| GGGATGGAAGAGATTGATAA+TGG | 0.448635 | 5:-68251551 | MsG0580027767.01.T01:CDS |
| AGGAATGTCCTGTTTGTAAA+GGG | 0.451056 | 5:-68251388 | MsG0580027767.01.T01:CDS |
| TGACCACAACATGTCAAAAC+AGG | 0.454953 | 5:+68251464 | None:intergenic |
| TATATCAATGGTCACAATAC+AGG | 0.455204 | 5:-68250933 | MsG0580027767.01.T01:CDS |
| TAGAAGAAGAAGATGCTCCT+TGG | 0.455800 | 5:+68251219 | None:intergenic |
| TAAAGGGGAGGTAACTGAAT+CGG | 0.458742 | 5:-68251372 | MsG0580027767.01.T01:CDS |
| GGCAAACCATTGTTTCTCTC+AGG | 0.458959 | 5:+68251113 | None:intergenic |
| CTCTCAACTCTAGGTGCCTT+AGG | 0.467180 | 5:+68251263 | None:intergenic |
| AGAAGAAGAAGATGCTCCTT+GGG | 0.474601 | 5:+68251220 | None:intergenic |
| GGTAAAGTGGAGGAGAGTAG+TGG | 0.474653 | 5:-68251530 | MsG0580027767.01.T01:CDS |
| CGGTTTCATAACCGAATTGG+TGG | 0.476371 | 5:-68251179 | MsG0580027767.01.T01:CDS |
| GCTCTCCAAATCCACCAATT+CGG | 0.478712 | 5:+68251168 | None:intergenic |
| CTTGACCACGACTCTCTGAC+TGG | 0.492720 | 5:+68250844 | None:intergenic |
| AGAGATTGATAATGGTAAAG+TGG | 0.493881 | 5:-68251543 | MsG0580027767.01.T01:CDS |
| CTTCTACCTCTAGATGAAGA+AGG | 0.495035 | 5:+68250687 | None:intergenic |
| GAGAGTTCCTCCTCGACCTA+AGG | 0.502667 | 5:-68251279 | MsG0580027767.01.T01:CDS |
| AAGGAATGTCCTGTTTGTAA+AGG | 0.503450 | 5:-68251389 | MsG0580027767.01.T01:CDS |
| AACAGCATTAAATTCTGCAA+TGG | 0.508273 | 5:-68250991 | MsG0580027767.01.T01:CDS |
| GAAGAAGAAGATTGCGATGA+CGG | 0.511269 | 5:-68250623 | None:intergenic |
| GACCTTGAATCATATATCAA+TGG | 0.517570 | 5:-68250945 | MsG0580027767.01.T01:CDS |
| AAAGGGGAGGTAACTGAATC+GGG | 0.517863 | 5:-68251371 | MsG0580027767.01.T01:CDS |
| ATTATTCCAATTTATGGACA+TGG | 0.526065 | 5:-68251347 | MsG0580027767.01.T01:CDS |
| GTAAAGTGGAGGAGAGTAGT+GGG | 0.535109 | 5:-68251529 | MsG0580027767.01.T01:CDS |
| TACAACTGATAGAAATGTAC+AGG | 0.535539 | 5:-68250724 | MsG0580027767.01.T01:CDS |
| TCGAGGAGGAACTCTCAAAC+CGG | 0.538001 | 5:+68251286 | None:intergenic |
| CTAGACCCTTCTTCATCTAG+AGG | 0.541703 | 5:-68250693 | MsG0580027767.01.T01:CDS |
| ACTCTAGGTGCCTTAGGTCG+AGG | 0.546117 | 5:+68251269 | None:intergenic |
| CTGATGGAAATGAAAGAAGC+CGG | 0.547924 | 5:-68251305 | MsG0580027767.01.T01:CDS |
| GTTGAATTTCTAGTAACAGT+AGG | 0.548372 | 5:+68250888 | None:intergenic |
| GAATTTCTAGTAACAGTAGG+AGG | 0.555492 | 5:+68250891 | None:intergenic |
| TGTCTAATACTCTCAACTCT+AGG | 0.555708 | 5:+68251254 | None:intergenic |
| GTTTCAAGGTTGCTAGAGCA+AGG | 0.560862 | 5:-68251038 | MsG0580027767.01.T01:CDS |
| TGGCGGCGGTGATTGTCTGA+TGG | 0.578360 | 5:-68251321 | MsG0580027767.01.T01:CDS |
| TTCTACCTCTAGATGAAGAA+GGG | 0.590516 | 5:+68250688 | None:intergenic |
| GATTGATAATGGTAAAGTGG+AGG | 0.594410 | 5:-68251540 | MsG0580027767.01.T01:CDS |
| ACCATTGTTTCTCTCAGGTG+TGG | 0.595758 | 5:+68251118 | None:intergenic |
| TATGGACATGGAAATGGCGG+CGG | 0.603447 | 5:-68251335 | MsG0580027767.01.T01:CDS |
| CAGACAGACAACAATGAACA+TGG | 0.607844 | 5:-68251074 | MsG0580027767.01.T01:CDS |
| TCTTCATCTAGAGGTAGAAG+AGG | 0.623511 | 5:-68250684 | MsG0580027767.01.T01:CDS |
| AGACAGAAGTTGCTAACCCA+AGG | 0.623915 | 5:-68251236 | MsG0580027767.01.T01:CDS |
| ACCACACCTGAGAGAAACAA+TGG | 0.640564 | 5:-68251119 | MsG0580027767.01.T01:CDS |
| ATCAATGGTCACAATACAGG+AGG | 0.640899 | 5:-68250930 | MsG0580027767.01.T01:CDS |
| ATGTCCTGTTTGTAAAGGGG+AGG | 0.641102 | 5:-68251384 | MsG0580027767.01.T01:CDS |
| GTATGCCTATTCGAAAGCAA+AGG | 0.642527 | 5:-68251408 | MsG0580027767.01.T01:CDS |
| ATTTATGGACATGGAAATGG+CGG | 0.647005 | 5:-68251338 | MsG0580027767.01.T01:CDS |
| GGAATGTCCTGTTTGTAAAG+GGG | 0.658869 | 5:-68251387 | MsG0580027767.01.T01:CDS |
| CTATTGTCCAAAGTATTCGG+CGG | 0.665724 | 5:-68251199 | MsG0580027767.01.T01:CDS |
| CTAGGTGCCTTAGGTCGAGG+AGG | 0.679868 | 5:+68251272 | None:intergenic |
| TACGATAACTGATAGAAACA+CGG | 0.689120 | 5:+68251428 | None:intergenic |
| ACAAACCAGTCAGAGAGTCG+TGG | 0.695607 | 5:-68250849 | MsG0580027767.01.T01:CDS |
| ACAGACAACAATGAACATGG+TGG | 0.773237 | 5:-68251071 | MsG0580027767.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTGATTGTAATATTTGTT+TGG | - | Chr5:68250673-68250692 | MsG0580027767.01.T01:CDS | 20.0% |
| ! | ATTATTCCAATTTATGGACA+TGG | - | Chr5:68250827-68250846 | MsG0580027767.01.T01:CDS | 25.0% |
| ! | TTATCAACATTCCTACTTAA+AGG | + | Chr5:68251403-68251422 | None:intergenic | 25.0% |
| AACAGCATTAAATTCTGCAA+TGG | - | Chr5:68251183-68251202 | MsG0580027767.01.T01:CDS | 30.0% | |
| GACCATTGATATATGATTCA+AGG | + | Chr5:68251234-68251253 | None:intergenic | 30.0% | |
| GACCTTGAATCATATATCAA+TGG | - | Chr5:68251229-68251248 | MsG0580027767.01.T01:CDS | 30.0% | |
| TACAACTGATAGAAATGTAC+AGG | - | Chr5:68251450-68251469 | MsG0580027767.01.T01:CDS | 30.0% | |
| TACGATAACTGATAGAAACA+CGG | + | Chr5:68250749-68250768 | None:intergenic | 30.0% | |
| TATATCAATGGTCACAATAC+AGG | - | Chr5:68251241-68251260 | MsG0580027767.01.T01:CDS | 30.0% | |
| TCGGGTATTATTCCAATTTA+TGG | - | Chr5:68250821-68250840 | MsG0580027767.01.T01:CDS | 30.0% | |
| ! | CTTCTATTGTCCAAAGTATT+CGG | - | Chr5:68250972-68250991 | MsG0580027767.01.T01:CDS | 30.0% |
| !! | AGAGATTGATAATGGTAAAG+TGG | - | Chr5:68250631-68250650 | MsG0580027767.01.T01:CDS | 30.0% |
| !! | GTTGAATTTCTAGTAACAGT+AGG | + | Chr5:68251289-68251308 | None:intergenic | 30.0% |
| AAGGAATGTCCTGTTTGTAA+AGG | - | Chr5:68250785-68250804 | MsG0580027767.01.T01:CDS | 35.0% | |
| ACATTCCTTTGCTTTCGAAT+AGG | + | Chr5:68250774-68250793 | None:intergenic | 35.0% | |
| AGGAATGTCCTGTTTGTAAA+GGG | - | Chr5:68250786-68250805 | MsG0580027767.01.T01:CDS | 35.0% | |
| ATTTATGGACATGGAAATGG+CGG | - | Chr5:68250836-68250855 | MsG0580027767.01.T01:CDS | 35.0% | |
| CCAATTTATGGACATGGAAA+TGG | - | Chr5:68250833-68250852 | MsG0580027767.01.T01:CDS | 35.0% | |
| CCATTTCCATGTCCATAAAT+TGG | + | Chr5:68250836-68250855 | None:intergenic | 35.0% | |
| CTTCTCTTTCTCCTTTAAGT+AGG | - | Chr5:68251389-68251408 | MsG0580027767.01.T01:CDS | 35.0% | |
| TGTCTAATACTCTCAACTCT+AGG | + | Chr5:68250923-68250942 | None:intergenic | 35.0% | |
| TTCTACCTCTAGATGAAGAA+GGG | + | Chr5:68251489-68251508 | None:intergenic | 35.0% | |
| ! | TTCTGCTGAAAGATTAGTTC+AGG | - | Chr5:68251207-68251226 | MsG0580027767.01.T01:CDS | 35.0% |
| !! | GAATTTCTAGTAACAGTAGG+AGG | + | Chr5:68251286-68251305 | None:intergenic | 35.0% |
| !! | GATTGATAATGGTAAAGTGG+AGG | - | Chr5:68250634-68250653 | MsG0580027767.01.T01:CDS | 35.0% |
| !!! | GTTGTGGTCATTTGTTTTGT+TGG | - | Chr5:68250723-68250742 | MsG0580027767.01.T01:CDS | 35.0% |
| ACAGACAACAATGAACATGG+TGG | - | Chr5:68251103-68251122 | MsG0580027767.01.T01:CDS | 40.0% | |
| AGAAGAAGAAGATGCTCCTT+GGG | + | Chr5:68250957-68250976 | None:intergenic | 40.0% | |
| ATCAATGGTCACAATACAGG+AGG | - | Chr5:68251244-68251263 | MsG0580027767.01.T01:CDS | 40.0% | |
| CAGACAGACAACAATGAACA+TGG | - | Chr5:68251100-68251119 | MsG0580027767.01.T01:CDS | 40.0% | |
| CGCAATCTTCTTCTTCTTCT+TGG | + | Chr5:68251547-68251566 | None:intergenic | 40.0% | |
| CTGATGGAAATGAAAGAAGC+CGG | - | Chr5:68250869-68250888 | MsG0580027767.01.T01:CDS | 40.0% | |
| CTTCTACCTCTAGATGAAGA+AGG | + | Chr5:68251490-68251509 | None:intergenic | 40.0% | |
| GGAATGTCCTGTTTGTAAAG+GGG | - | Chr5:68250787-68250806 | MsG0580027767.01.T01:CDS | 40.0% | |
| GTATGCCTATTCGAAAGCAA+AGG | - | Chr5:68250766-68250785 | MsG0580027767.01.T01:CDS | 40.0% | |
| TAAAGGGGAGGTAACTGAAT+CGG | - | Chr5:68250802-68250821 | MsG0580027767.01.T01:CDS | 40.0% | |
| TAGAAGAAGAAGATGCTCCT+TGG | + | Chr5:68250958-68250977 | None:intergenic | 40.0% | |
| TATGAAACCGCCGAATACTT+TGG | + | Chr5:68250985-68251004 | None:intergenic | 40.0% | |
| TCTCAGGTGTGGTACTATTA+GGG | + | Chr5:68251048-68251067 | None:intergenic | 40.0% | |
| TCTTCATCTAGAGGTAGAAG+AGG | - | Chr5:68251490-68251509 | MsG0580027767.01.T01:CDS | 40.0% | |
| TGACCACAACATGTCAAAAC+AGG | + | Chr5:68250713-68250732 | None:intergenic | 40.0% | |
| ! | CTATTGTCCAAAGTATTCGG+CGG | - | Chr5:68250975-68250994 | MsG0580027767.01.T01:CDS | 40.0% |
| !! | CATAACCGAATTGGTGGATT+TGG | - | Chr5:68251001-68251020 | MsG0580027767.01.T01:CDS | 40.0% |
| !! | GTTGATAATGTTGCTGTTGC+AGG | - | Chr5:68251415-68251434 | MsG0580027767.01.T01:CDS | 40.0% |
| !!! | GATCCTGTTTTGACATGTTG+TGG | - | Chr5:68250707-68250726 | MsG0580027767.01.T01:CDS | 40.0% |
| AAAGGGGAGGTAACTGAATC+GGG | - | Chr5:68250803-68250822 | MsG0580027767.01.T01:CDS | 45.0% | |
| ACCACACCTGAGAGAAACAA+TGG | - | Chr5:68251055-68251074 | MsG0580027767.01.T01:CDS | 45.0% | |
| AGACAGAAGTTGCTAACCCA+AGG | - | Chr5:68250938-68250957 | MsG0580027767.01.T01:CDS | 45.0% | |
| ATGTCCTGTTTGTAAAGGGG+AGG | - | Chr5:68250790-68250809 | MsG0580027767.01.T01:CDS | 45.0% | |
| CGGTTTCATAACCGAATTGG+TGG | - | Chr5:68250995-68251014 | MsG0580027767.01.T01:CDS | 45.0% | |
| CTAGACCCTTCTTCATCTAG+AGG | - | Chr5:68251481-68251500 | MsG0580027767.01.T01:CDS | 45.0% | |
| CTCTCAGGTGTGGTACTATT+AGG | + | Chr5:68251049-68251068 | None:intergenic | 45.0% | |
| GCTCTCCAAATCCACCAATT+CGG | + | Chr5:68251009-68251028 | None:intergenic | 45.0% | |
| GTAAAGTGGAGGAGAGTAGT+GGG | - | Chr5:68250645-68250664 | MsG0580027767.01.T01:CDS | 45.0% | |
| GTGGTTCTCAACAGGTTTCA+AGG | - | Chr5:68251122-68251141 | MsG0580027767.01.T01:CDS | 45.0% | |
| GTTACCTCCCCTTTACAAAC+AGG | + | Chr5:68250797-68250816 | None:intergenic | 45.0% | |
| GTTTCAAGGTTGCTAGAGCA+AGG | - | Chr5:68251136-68251155 | MsG0580027767.01.T01:CDS | 45.0% | |
| TGAACATGGTGGTTCTCAAC+AGG | - | Chr5:68251114-68251133 | MsG0580027767.01.T01:CDS | 45.0% | |
| ! | ACCATTGTTTCTCTCAGGTG+TGG | + | Chr5:68251059-68251078 | None:intergenic | 45.0% |
| ! | GGCAAACCATTGTTTCTCTC+AGG | + | Chr5:68251064-68251083 | None:intergenic | 45.0% |
| ACAAACCAGTCAGAGAGTCG+TGG | - | Chr5:68251325-68251344 | MsG0580027767.01.T01:CDS | 50.0% | |
| AGCTGCTGCAGCTACAGAAT+TGG | + | Chr5:68251371-68251390 | None:intergenic | 50.0% | |
| CGGCGGTTTCATAACCGAAT+TGG | - | Chr5:68250992-68251011 | MsG0580027767.01.T01:CDS | 50.0% | |
| CTCTCAACTCTAGGTGCCTT+AGG | + | Chr5:68250914-68250933 | None:intergenic | 50.0% | |
| GGTAAAGTGGAGGAGAGTAG+TGG | - | Chr5:68250644-68250663 | MsG0580027767.01.T01:CDS | 50.0% | |
| TATGGACATGGAAATGGCGG+CGG | - | Chr5:68250839-68250858 | MsG0580027767.01.T01:CDS | 50.0% | |
| TCGAGGAGGAACTCTCAAAC+CGG | + | Chr5:68250891-68250910 | None:intergenic | 50.0% | |
| ACTCTAGGTGCCTTAGGTCG+AGG | + | Chr5:68250908-68250927 | None:intergenic | 55.0% | |
| CTTGACCACGACTCTCTGAC+TGG | + | Chr5:68251333-68251352 | None:intergenic | 55.0% | |
| GAGAGTTCCTCCTCGACCTA+AGG | - | Chr5:68250895-68250914 | MsG0580027767.01.T01:CDS | 55.0% | |
| CTAGGTGCCTTAGGTCGAGG+AGG | + | Chr5:68250905-68250924 | None:intergenic | 60.0% | |
| GTCTGCGTGCGAGACTGAAC+AGG | + | Chr5:68251085-68251104 | None:intergenic | 60.0% | |
| TGGCGGCGGTGATTGTCTGA+TGG | - | Chr5:68250853-68250872 | MsG0580027767.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 68250626 | 68251570 | 68250626 | ID=MsG0580027767.01;Name=MsG0580027767.01 |
| Chr5 | mRNA | 68250626 | 68251570 | 68250626 | ID=MsG0580027767.01.T01;Parent=MsG0580027767.01;Name=MsG0580027767.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|314 |
| Chr5 | exon | 68250626 | 68251570 | 68250626 | ID=MsG0580027767.01.T01:exon:1049;Parent=MsG0580027767.01.T01 |
| Chr5 | CDS | 68250626 | 68251570 | 68250626 | ID=MsG0580027767.01.T01:cds;Parent=MsG0580027767.01.T01 |
| Gene Sequence |
| Protein sequence |
