Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023465.01.T01 | XP_024629521.1 | 71.958 | 189 | 13 | 3 | 1 | 163 | 1 | 175 | 6.11E-80 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023465.01.T01 | O23657 | 62.434 | 189 | 31 | 3 | 1 | 163 | 1 | 175 | 6.58E-70 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023465.01.T01 | G7LE30 | 71.958 | 189 | 13 | 3 | 1 | 163 | 1 | 175 | 2.92e-80 | 246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0480023465.01 | 0.803550 | 3.304594e-49 | 1.665512e-46 |
| MsG0080048843.01 | MsG0480023465.01 | 0.812573 | 3.961713e-51 | 2.527866e-48 |
| MsG0080048968.01 | MsG0480023465.01 | 0.802405 | 5.698451e-49 | 2.789151e-46 |
| MsG0180001043.01 | MsG0480023465.01 | 0.813026 | 3.151714e-51 | 2.035293e-48 |
| MsG0180003586.01 | MsG0480023465.01 | 0.802501 | 5.445479e-49 | 2.671662e-46 |
| MsG0180004016.01 | MsG0480023465.01 | 0.805594 | 1.238000e-49 | 6.575898e-47 |
| MsG0180005106.01 | MsG0480023465.01 | 0.812432 | 4.253193e-51 | 2.703933e-48 |
| MsG0380013541.01 | MsG0480023465.01 | 0.816812 | 4.559470e-52 | 3.263954e-49 |
| MsG0380014578.01 | MsG0480023465.01 | 0.816758 | 4.689368e-52 | 3.352041e-49 |
| MsG0480019642.01 | MsG0480023465.01 | 0.804844 | 1.777039e-49 | 9.259601e-47 |
| MsG0480020843.01 | MsG0480023465.01 | 0.821330 | 4.276819e-53 | 3.469036e-50 |
| MsG0480022104.01 | MsG0480023465.01 | 0.802478 | 5.504333e-49 | 2.698999e-46 |
| MsG0480022183.01 | MsG0480023465.01 | 0.806580 | 7.676964e-50 | 4.181924e-47 |
| MsG0480023465.01 | MsG0480023517.01 | 0.803744 | 3.012546e-49 | 1.525817e-46 |
| MsG0480023465.01 | MsG0580024191.01 | 0.806296 | 8.814801e-50 | 4.767084e-47 |
| MsG0480023465.01 | MsG0580029628.01 | 0.813390 | 2.623037e-51 | 1.710780e-48 |
| MsG0480023465.01 | MsG0580029801.01 | 0.810410 | 1.168691e-50 | 7.039338e-48 |
| MsG0480023465.01 | MsG0680030841.01 | 0.802773 | 4.785908e-49 | 2.364540e-46 |
| MsG0480023465.01 | MsG0680031654.01 | 0.804132 | 2.501839e-49 | 1.279827e-46 |
| MsG0480023465.01 | MsG0680031828.01 | 0.814823 | 1.265873e-51 | 8.582530e-49 |
| MsG0480023465.01 | MsG0680035306.01 | 0.803837 | 2.880901e-49 | 1.462690e-46 |
| MsG0480023465.01 | MsG0780039628.01 | 0.805535 | 1.273914e-49 | 6.756292e-47 |
| MsG0480023465.01 | MsG0780039943.01 | 0.820019 | 8.557915e-53 | 6.693557e-50 |
| MsG0480023465.01 | MsG0780040418.01 | 0.815501 | 8.950943e-52 | 6.182239e-49 |
| MsG0480023465.01 | MsG0780041399.01 | 0.800120 | 1.672499e-48 | 7.725011e-46 |
| MsG0480023465.01 | MsG0880043082.01 | 0.800739 | 1.251405e-48 | 5.871500e-46 |
| MsG0480023465.01 | MsG0880044409.01 | 0.801852 | 7.404258e-49 | 3.573333e-46 |
| MsG0480023465.01 | MsG0880046068.01 | 0.808008 | 3.823835e-50 | 2.161776e-47 |
| MsG0480023465.01 | MsG0880046342.01 | 0.811466 | 6.904969e-51 | 4.277351e-48 |
| MsG0480023465.01 | MsG0880046733.01 | 0.804132 | 2.501839e-49 | 1.279827e-46 |
| MsG0380015818.01 | MsG0480023465.01 | 0.801089 | 1.061399e-48 | 5.024737e-46 |
| MsG0380017864.01 | MsG0480023465.01 | 0.812015 | 5.244243e-51 | 3.296344e-48 |
| MsG0380018001.01 | MsG0480023465.01 | 0.825666 | 4.139276e-54 | 3.797521e-51 |
| MsG0480018332.01 | MsG0480023465.01 | 0.804836 | 1.784314e-49 | 9.295453e-47 |
| MsG0280007549.01 | MsG0480023465.01 | 0.812746 | 3.629590e-51 | 2.326601e-48 |
| MsG0280008286.01 | MsG0480023465.01 | 0.818181 | 2.241167e-52 | 1.665751e-49 |
| MsG0280010416.01 | MsG0480023465.01 | 0.802406 | 5.695047e-49 | 2.787573e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023465.01.T01 | MTR_8g093740 | 71.958 | 189 | 13 | 3 | 1 | 163 | 1 | 175 | 7.40e-84 | 246 |
| MsG0480023465.01.T01 | MTR_3g096350 | 65.079 | 189 | 25 | 4 | 1 | 163 | 1 | 174 | 2.05e-72 | 216 |
| MsG0480023465.01.T01 | MTR_1g029450 | 60.773 | 181 | 31 | 3 | 9 | 163 | 13 | 179 | 2.64e-67 | 204 |
| MsG0480023465.01.T01 | MTR_8g093740 | 62.252 | 151 | 17 | 3 | 39 | 163 | 6 | 142 | 1.90e-50 | 160 |
| MsG0480023465.01.T01 | MTR_1g090717 | 48.187 | 193 | 56 | 5 | 1 | 163 | 1 | 179 | 1.07e-48 | 156 |
| MsG0480023465.01.T01 | MTR_7g103070 | 48.619 | 181 | 52 | 5 | 10 | 163 | 13 | 179 | 2.92e-48 | 155 |
| MsG0480023465.01.T01 | MTR_1g062760 | 48.333 | 180 | 53 | 4 | 10 | 163 | 11 | 176 | 1.03e-47 | 154 |
| MsG0480023465.01.T01 | MTR_3g096350 | 76.190 | 105 | 10 | 2 | 1 | 105 | 1 | 90 | 3.08e-46 | 148 |
| MsG0480023465.01.T01 | MTR_3g096350 | 76.190 | 105 | 10 | 2 | 1 | 105 | 1 | 90 | 3.19e-46 | 148 |
| MsG0480023465.01.T01 | MTR_2g005500 | 40.884 | 181 | 68 | 3 | 8 | 163 | 4 | 170 | 8.84e-36 | 123 |
| MsG0480023465.01.T01 | MTR_7g081700 | 42.938 | 177 | 54 | 4 | 9 | 156 | 4 | 162 | 2.38e-34 | 119 |
| MsG0480023465.01.T01 | MTR_8g006970 | 39.560 | 182 | 71 | 3 | 7 | 163 | 2 | 169 | 1.35e-33 | 117 |
| MsG0480023465.01.T01 | MTR_8g006970 | 39.888 | 178 | 68 | 3 | 11 | 163 | 20 | 183 | 5.67e-32 | 114 |
| MsG0480023465.01.T01 | MTR_1g068740 | 39.548 | 177 | 67 | 4 | 6 | 156 | 8 | 170 | 1.03e-31 | 113 |
| MsG0480023465.01.T01 | MTR_1g115325 | 40.230 | 174 | 64 | 4 | 9 | 156 | 11 | 170 | 1.09e-31 | 113 |
| MsG0480023465.01.T01 | MTR_6g079550 | 39.011 | 182 | 72 | 5 | 8 | 164 | 7 | 174 | 1.64e-31 | 112 |
| MsG0480023465.01.T01 | MTR_1g068730 | 39.548 | 177 | 67 | 4 | 6 | 156 | 8 | 170 | 2.26e-31 | 112 |
| MsG0480023465.01.T01 | MTR_7g100020 | 40.230 | 174 | 64 | 4 | 9 | 156 | 11 | 170 | 2.49e-31 | 112 |
| MsG0480023465.01.T01 | MTR_2g096550 | 38.889 | 180 | 67 | 7 | 5 | 156 | 7 | 171 | 1.69e-29 | 107 |
| MsG0480023465.01.T01 | MTR_6g021790 | 36.872 | 179 | 74 | 4 | 10 | 163 | 3 | 167 | 1.95e-29 | 107 |
| MsG0480023465.01.T01 | MTR_7g051940 | 37.640 | 178 | 72 | 4 | 12 | 164 | 12 | 175 | 1.58e-28 | 105 |
| MsG0480023465.01.T01 | MTR_8g031660 | 37.059 | 170 | 68 | 5 | 12 | 156 | 5 | 160 | 5.69e-28 | 103 |
| MsG0480023465.01.T01 | MTR_8g031870 | 36.471 | 170 | 69 | 4 | 12 | 156 | 5 | 160 | 5.73e-28 | 103 |
| MsG0480023465.01.T01 | MTR_7g103070 | 43.382 | 136 | 37 | 4 | 54 | 163 | 2 | 123 | 6.35e-28 | 102 |
| MsG0480023465.01.T01 | MTR_2g027660 | 38.372 | 172 | 67 | 5 | 10 | 156 | 3 | 160 | 1.67e-27 | 102 |
| MsG0480023465.01.T01 | MTR_2g005510 | 35.028 | 177 | 76 | 5 | 6 | 157 | 8 | 170 | 1.87e-27 | 102 |
| MsG0480023465.01.T01 | MTR_8g027220 | 34.973 | 183 | 80 | 5 | 7 | 164 | 20 | 188 | 1.96e-27 | 102 |
| MsG0480023465.01.T01 | MTR_2g083860 | 34.239 | 184 | 82 | 5 | 6 | 164 | 6 | 175 | 2.12e-27 | 102 |
| MsG0480023465.01.T01 | MTR_4g064897 | 32.967 | 182 | 83 | 5 | 8 | 164 | 7 | 174 | 2.20e-27 | 102 |
| MsG0480023465.01.T01 | MTR_1g068730 | 49.020 | 102 | 37 | 2 | 4 | 104 | 6 | 93 | 2.36e-27 | 100 |
| MsG0480023465.01.T01 | MTR_1g078200 | 35.754 | 179 | 76 | 4 | 11 | 164 | 12 | 176 | 3.14e-27 | 102 |
| MsG0480023465.01.T01 | MTR_1g068740 | 49.020 | 102 | 37 | 2 | 4 | 104 | 6 | 93 | 5.38e-27 | 100 |
| MsG0480023465.01.T01 | MTR_3g086980 | 34.091 | 176 | 77 | 3 | 6 | 156 | 9 | 170 | 5.89e-27 | 101 |
| MsG0480023465.01.T01 | MTR_4g063160 | 38.068 | 176 | 67 | 5 | 9 | 156 | 11 | 172 | 2.81e-26 | 99.4 |
| MsG0480023465.01.T01 | MTR_2g090865 | 34.615 | 182 | 80 | 5 | 8 | 164 | 6 | 173 | 3.16e-26 | 99.4 |
| MsG0480023465.01.T01 | MTR_3g069510 | 32.418 | 182 | 84 | 5 | 8 | 164 | 7 | 174 | 5.51e-26 | 98.6 |
| MsG0480023465.01.T01 | MTR_2g075950 | 31.522 | 184 | 87 | 5 | 6 | 164 | 6 | 175 | 6.14e-26 | 98.6 |
| MsG0480023465.01.T01 | MTR_2g014990 | 31.746 | 189 | 90 | 5 | 1 | 164 | 1 | 175 | 1.14e-25 | 97.8 |
| MsG0480023465.01.T01 | MTR_8g089985 | 31.522 | 184 | 87 | 3 | 6 | 164 | 10 | 179 | 2.69e-25 | 97.1 |
| MsG0480023465.01.T01 | MTR_4g088090 | 31.217 | 189 | 91 | 5 | 1 | 164 | 1 | 175 | 2.83e-25 | 97.1 |
| MsG0480023465.01.T01 | MTR_8g107070 | 36.464 | 181 | 76 | 5 | 8 | 163 | 9 | 175 | 4.96e-25 | 97.4 |
| MsG0480023465.01.T01 | MTR_4g079350 | 31.746 | 189 | 90 | 5 | 1 | 164 | 1 | 175 | 9.53e-25 | 95.5 |
| MsG0480023465.01.T01 | MTR_8g031680 | 35.882 | 170 | 70 | 4 | 12 | 156 | 5 | 160 | 1.60e-24 | 94.7 |
| MsG0480023465.01.T01 | MTR_7g405790 | 34.270 | 178 | 78 | 5 | 12 | 164 | 14 | 177 | 2.57e-24 | 94.4 |
| MsG0480023465.01.T01 | MTR_1g052475 | 32.240 | 183 | 85 | 5 | 7 | 164 | 9 | 177 | 3.89e-24 | 94.0 |
| MsG0480023465.01.T01 | MTR_0262s0050 | 33.149 | 181 | 82 | 5 | 9 | 164 | 11 | 177 | 4.46e-24 | 94.0 |
| MsG0480023465.01.T01 | MTR_8g036220 | 37.427 | 171 | 68 | 5 | 11 | 156 | 14 | 170 | 1.91e-23 | 92.4 |
| MsG0480023465.01.T01 | MTR_7g117910 | 46.939 | 98 | 37 | 2 | 8 | 104 | 15 | 98 | 1.29e-22 | 89.7 |
| MsG0480023465.01.T01 | MTR_8g031830 | 35.714 | 168 | 69 | 5 | 12 | 154 | 5 | 158 | 2.28e-22 | 89.0 |
| MsG0480023465.01.T01 | MTR_2g005500 | 36.306 | 157 | 69 | 4 | 8 | 163 | 4 | 130 | 2.59e-22 | 87.8 |
| MsG0480023465.01.T01 | MTR_4g099470 | 35.417 | 144 | 55 | 2 | 44 | 163 | 16 | 145 | 7.20e-20 | 82.0 |
| MsG0480023465.01.T01 | MTR_5g076590 | 32.184 | 174 | 79 | 3 | 15 | 163 | 12 | 171 | 5.26e-19 | 80.1 |
| MsG0480023465.01.T01 | MTR_8g103550 | 31.609 | 174 | 80 | 4 | 15 | 163 | 11 | 170 | 1.70e-18 | 79.0 |
| MsG0480023465.01.T01 | MTR_1g094220 | 31.429 | 175 | 80 | 5 | 15 | 163 | 33 | 193 | 2.49e-18 | 78.2 |
| MsG0480023465.01.T01 | MTR_1g094220 | 31.977 | 172 | 77 | 5 | 15 | 160 | 33 | 190 | 2.80e-18 | 78.2 |
| MsG0480023465.01.T01 | MTR_2g102060 | 30.588 | 170 | 79 | 3 | 15 | 159 | 12 | 167 | 7.20e-18 | 77.0 |
| MsG0480023465.01.T01 | MTR_1g094220 | 31.953 | 169 | 75 | 5 | 15 | 157 | 33 | 187 | 4.12e-17 | 75.5 |
| MsG0480023465.01.T01 | MTR_3g064390 | 31.034 | 174 | 81 | 4 | 15 | 163 | 12 | 171 | 4.89e-17 | 75.1 |
| MsG0480023465.01.T01 | MTR_1g094220 | 31.953 | 169 | 75 | 5 | 15 | 157 | 33 | 187 | 9.03e-17 | 75.1 |
| MsG0480023465.01.T01 | MTR_4g098950 | 29.070 | 172 | 83 | 3 | 14 | 160 | 10 | 167 | 9.80e-17 | 74.3 |
| MsG0480023465.01.T01 | MTR_5g013900 | 30.814 | 172 | 80 | 5 | 14 | 160 | 10 | 167 | 2.45e-16 | 73.2 |
| MsG0480023465.01.T01 | MTR_8g090215 | 29.070 | 172 | 83 | 3 | 14 | 160 | 10 | 167 | 2.78e-16 | 73.2 |
| MsG0480023465.01.T01 | MTR_3g087160 | 29.651 | 172 | 82 | 3 | 14 | 160 | 10 | 167 | 3.16e-16 | 72.8 |
| MsG0480023465.01.T01 | MTR_4g069850 | 28.889 | 180 | 82 | 6 | 13 | 160 | 8 | 173 | 2.50e-13 | 65.1 |
| MsG0480023465.01.T01 | MTR_2g101890 | 37.634 | 93 | 43 | 2 | 13 | 104 | 10 | 88 | 3.49e-13 | 65.1 |
| MsG0480023465.01.T01 | MTR_1g097420 | 30.114 | 176 | 77 | 7 | 13 | 156 | 8 | 169 | 9.90e-13 | 63.5 |
| MsG0480023465.01.T01 | MTR_4g012940 | 37.634 | 93 | 43 | 2 | 13 | 104 | 8 | 86 | 1.10e-12 | 63.5 |
| MsG0480023465.01.T01 | MTR_3g064390 | 38.462 | 91 | 41 | 2 | 15 | 104 | 12 | 88 | 2.09e-12 | 62.0 |
| MsG0480023465.01.T01 | MTR_8g092020 | 36.190 | 105 | 51 | 3 | 1 | 104 | 1 | 90 | 2.44e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023465.01.T01 | AT1G43890 | 62.434 | 189 | 31 | 3 | 1 | 163 | 1 | 175 | 6.71e-71 | 213 |
| MsG0480023465.01.T01 | AT1G43890 | 62.434 | 189 | 31 | 3 | 1 | 163 | 1 | 175 | 6.71e-71 | 213 |
| MsG0480023465.01.T01 | AT1G43890 | 62.434 | 189 | 31 | 3 | 1 | 163 | 1 | 175 | 6.71e-71 | 213 |
| MsG0480023465.01.T01 | AT5G03530 | 50.794 | 189 | 53 | 4 | 1 | 163 | 1 | 175 | 5.60e-55 | 172 |
| MsG0480023465.01.T01 | AT5G03530 | 50.794 | 189 | 53 | 4 | 1 | 163 | 1 | 175 | 5.60e-55 | 172 |
| MsG0480023465.01.T01 | AT3G09910 | 48.947 | 190 | 57 | 5 | 1 | 164 | 1 | 176 | 1.47e-44 | 145 |
| MsG0480023465.01.T01 | AT3G09910 | 48.947 | 190 | 57 | 5 | 1 | 164 | 1 | 176 | 1.47e-44 | 145 |
| MsG0480023465.01.T01 | AT3G09910 | 48.677 | 189 | 57 | 5 | 1 | 163 | 1 | 175 | 3.86e-44 | 145 |
| MsG0480023465.01.T01 | AT3G09910 | 48.677 | 189 | 57 | 5 | 1 | 163 | 1 | 175 | 3.86e-44 | 145 |
| MsG0480023465.01.T01 | AT3G09910 | 48.677 | 189 | 57 | 5 | 1 | 163 | 1 | 175 | 3.86e-44 | 145 |
| MsG0480023465.01.T01 | AT5G47200 | 40.556 | 180 | 68 | 3 | 9 | 163 | 4 | 169 | 1.01e-34 | 120 |
| MsG0480023465.01.T01 | AT4G17530 | 40.556 | 180 | 68 | 3 | 9 | 163 | 4 | 169 | 1.37e-34 | 120 |
| MsG0480023465.01.T01 | AT3G11730 | 41.954 | 174 | 62 | 4 | 8 | 156 | 3 | 162 | 2.66e-34 | 119 |
| MsG0480023465.01.T01 | AT1G02130 | 41.618 | 173 | 62 | 3 | 9 | 156 | 4 | 162 | 1.71e-33 | 117 |
| MsG0480023465.01.T01 | AT4G35860 | 39.665 | 179 | 69 | 5 | 10 | 163 | 3 | 167 | 2.00e-32 | 115 |
| MsG0480023465.01.T01 | AT5G59840 | 40.805 | 174 | 63 | 4 | 9 | 156 | 11 | 170 | 2.67e-32 | 115 |
| MsG0480023465.01.T01 | AT3G53610 | 40.805 | 174 | 63 | 4 | 9 | 156 | 11 | 170 | 3.17e-32 | 114 |
| MsG0480023465.01.T01 | AT3G53610 | 40.805 | 174 | 63 | 4 | 9 | 156 | 11 | 170 | 3.17e-32 | 114 |
| MsG0480023465.01.T01 | AT3G53610 | 40.805 | 174 | 63 | 4 | 9 | 156 | 11 | 170 | 3.17e-32 | 114 |
| MsG0480023465.01.T01 | AT3G46060 | 40.230 | 174 | 64 | 4 | 9 | 156 | 11 | 170 | 2.42e-31 | 112 |
| MsG0480023465.01.T01 | AT3G46060 | 40.230 | 174 | 64 | 4 | 9 | 156 | 11 | 170 | 2.42e-31 | 112 |
| MsG0480023465.01.T01 | AT3G46060 | 40.230 | 174 | 64 | 4 | 9 | 156 | 11 | 170 | 2.42e-31 | 112 |
| MsG0480023465.01.T01 | AT3G09900 | 40.678 | 177 | 65 | 4 | 6 | 156 | 8 | 170 | 4.50e-31 | 112 |
| MsG0480023465.01.T01 | AT5G03520 | 39.106 | 179 | 69 | 4 | 4 | 156 | 6 | 170 | 3.56e-30 | 109 |
| MsG0480023465.01.T01 | AT4G17160 | 36.111 | 180 | 76 | 3 | 10 | 164 | 3 | 168 | 6.92e-30 | 108 |
| MsG0480023465.01.T01 | AT1G18200 | 37.566 | 189 | 79 | 5 | 1 | 164 | 1 | 175 | 3.34e-29 | 107 |
| MsG0480023465.01.T01 | AT1G73640 | 37.037 | 189 | 80 | 5 | 1 | 164 | 1 | 175 | 3.73e-29 | 107 |
| MsG0480023465.01.T01 | AT1G06400 | 34.921 | 189 | 84 | 5 | 1 | 164 | 1 | 175 | 4.83e-29 | 106 |
| MsG0480023465.01.T01 | AT1G05810 | 36.364 | 187 | 80 | 4 | 3 | 164 | 2 | 174 | 5.76e-29 | 106 |
| MsG0480023465.01.T01 | AT3G07410 | 38.202 | 178 | 71 | 5 | 11 | 163 | 10 | 173 | 1.22e-28 | 105 |
| MsG0480023465.01.T01 | AT1G05810 | 36.364 | 187 | 80 | 4 | 3 | 164 | 48 | 220 | 1.63e-28 | 106 |
| MsG0480023465.01.T01 | AT4G17170 | 38.372 | 172 | 67 | 5 | 10 | 156 | 3 | 160 | 4.17e-28 | 103 |
| MsG0480023465.01.T01 | AT4G39990 | 34.078 | 179 | 79 | 3 | 11 | 164 | 15 | 179 | 4.51e-28 | 104 |
| MsG0480023465.01.T01 | AT5G47520 | 36.872 | 179 | 74 | 5 | 11 | 164 | 12 | 176 | 5.50e-28 | 103 |
| MsG0480023465.01.T01 | AT2G33870 | 32.804 | 189 | 88 | 5 | 1 | 164 | 1 | 175 | 8.39e-28 | 103 |
| MsG0480023465.01.T01 | AT3G46830 | 35.165 | 182 | 79 | 4 | 8 | 164 | 7 | 174 | 2.08e-27 | 102 |
| MsG0480023465.01.T01 | AT3G46830 | 35.165 | 182 | 79 | 4 | 8 | 164 | 7 | 174 | 2.08e-27 | 102 |
| MsG0480023465.01.T01 | AT2G43130 | 35.196 | 179 | 77 | 4 | 11 | 164 | 10 | 174 | 2.33e-27 | 102 |
| MsG0480023465.01.T01 | AT1G09630 | 34.066 | 182 | 81 | 5 | 8 | 164 | 7 | 174 | 3.09e-27 | 102 |
| MsG0480023465.01.T01 | AT2G31680 | 35.754 | 179 | 76 | 4 | 11 | 164 | 10 | 174 | 4.18e-27 | 101 |
| MsG0480023465.01.T01 | AT1G07410 | 34.066 | 182 | 81 | 4 | 8 | 164 | 7 | 174 | 7.16e-27 | 100 |
| MsG0480023465.01.T01 | AT5G59150 | 33.880 | 183 | 82 | 4 | 7 | 164 | 6 | 174 | 1.20e-26 | 100 |
| MsG0480023465.01.T01 | AT1G28550 | 32.804 | 189 | 88 | 5 | 1 | 164 | 1 | 175 | 4.34e-26 | 99.0 |
| MsG0480023465.01.T01 | AT5G60860 | 32.275 | 189 | 89 | 4 | 1 | 164 | 1 | 175 | 6.43e-26 | 98.6 |
| MsG0480023465.01.T01 | AT1G16920 | 32.240 | 183 | 85 | 5 | 7 | 164 | 7 | 175 | 7.08e-26 | 98.6 |
| MsG0480023465.01.T01 | AT5G45750 | 32.609 | 184 | 85 | 5 | 6 | 164 | 6 | 175 | 8.76e-26 | 98.2 |
| MsG0480023465.01.T01 | AT4G18430 | 32.275 | 189 | 89 | 5 | 1 | 164 | 1 | 175 | 4.25e-25 | 96.7 |
| MsG0480023465.01.T01 | AT3G12160 | 33.333 | 183 | 83 | 5 | 7 | 164 | 9 | 177 | 1.02e-24 | 95.5 |
| MsG0480023465.01.T01 | AT5G65270 | 32.044 | 181 | 84 | 5 | 8 | 163 | 12 | 178 | 1.70e-24 | 95.1 |
| MsG0480023465.01.T01 | AT3G15060 | 30.688 | 189 | 92 | 5 | 1 | 164 | 1 | 175 | 4.25e-24 | 94.0 |
| MsG0480023465.01.T01 | AT4G18800 | 31.522 | 184 | 87 | 5 | 6 | 164 | 6 | 175 | 5.09e-24 | 93.6 |
| MsG0480023465.01.T01 | AT1G01200 | 33.714 | 175 | 76 | 4 | 8 | 156 | 23 | 183 | 4.86e-23 | 91.7 |
| MsG0480023465.01.T01 | AT5G47960 | 31.720 | 186 | 88 | 5 | 4 | 164 | 6 | 177 | 9.95e-23 | 90.5 |
| MsG0480023465.01.T01 | AT4G39890 | 33.526 | 173 | 75 | 5 | 14 | 160 | 10 | 168 | 5.23e-20 | 83.2 |
| MsG0480023465.01.T01 | AT4G19640 | 31.609 | 174 | 80 | 4 | 15 | 163 | 12 | 171 | 3.05e-19 | 80.9 |
| MsG0480023465.01.T01 | AT5G45130 | 30.645 | 186 | 88 | 5 | 3 | 163 | 2 | 171 | 3.93e-18 | 77.8 |
| MsG0480023465.01.T01 | AT5G10260 | 30.233 | 172 | 81 | 3 | 14 | 160 | 10 | 167 | 5.09e-18 | 77.8 |
| MsG0480023465.01.T01 | AT2G22290 | 30.814 | 172 | 80 | 4 | 14 | 160 | 10 | 167 | 1.10e-17 | 77.0 |
| MsG0480023465.01.T01 | AT3G54840 | 32.164 | 171 | 76 | 5 | 15 | 159 | 35 | 191 | 5.90e-17 | 74.7 |
| MsG0480023465.01.T01 | AT3G54840 | 31.765 | 170 | 76 | 5 | 16 | 159 | 2 | 157 | 1.12e-16 | 73.6 |
| MsG0480023465.01.T01 | AT5G03520 | 34.815 | 135 | 49 | 3 | 47 | 156 | 40 | 160 | 2.18e-16 | 73.6 |
| MsG0480023465.01.T01 | AT2G44610 | 30.233 | 172 | 81 | 4 | 14 | 160 | 10 | 167 | 3.22e-16 | 73.2 |
| MsG0480023465.01.T01 | AT3G54840 | 31.953 | 169 | 75 | 5 | 15 | 157 | 35 | 189 | 4.87e-16 | 72.4 |
| MsG0480023465.01.T01 | AT5G64990 | 29.762 | 168 | 79 | 3 | 14 | 156 | 8 | 161 | 5.25e-16 | 72.4 |
| MsG0480023465.01.T01 | AT5G64990 | 29.762 | 168 | 86 | 3 | 14 | 156 | 8 | 168 | 5.95e-15 | 69.7 |
| MsG0480023465.01.T01 | AT2G21880 | 28.977 | 176 | 79 | 5 | 13 | 156 | 9 | 170 | 2.14e-14 | 68.2 |
| MsG0480023465.01.T01 | AT3G16100 | 31.638 | 177 | 75 | 6 | 13 | 157 | 8 | 170 | 4.81e-14 | 67.4 |
| MsG0480023465.01.T01 | AT5G39620 | 29.670 | 182 | 82 | 4 | 14 | 163 | 6 | 173 | 9.04e-14 | 66.6 |
| MsG0480023465.01.T01 | AT4G19640 | 39.560 | 91 | 40 | 2 | 15 | 104 | 12 | 88 | 1.21e-13 | 65.1 |
| MsG0480023465.01.T01 | AT4G19640 | 39.560 | 91 | 40 | 2 | 15 | 104 | 12 | 88 | 1.74e-13 | 65.5 |
| MsG0480023465.01.T01 | AT1G52280 | 38.710 | 93 | 42 | 2 | 13 | 104 | 8 | 86 | 4.48e-13 | 64.7 |
| MsG0480023465.01.T01 | AT3G18820 | 28.814 | 177 | 80 | 5 | 13 | 157 | 8 | 170 | 5.07e-13 | 64.3 |
| MsG0480023465.01.T01 | AT1G22740 | 30.114 | 176 | 77 | 7 | 13 | 156 | 8 | 169 | 6.09e-13 | 64.3 |
| MsG0480023465.01.T01 | AT4G09720 | 28.729 | 181 | 78 | 6 | 13 | 156 | 8 | 174 | 1.49e-12 | 63.2 |
| MsG0480023465.01.T01 | AT1G49300 | 37.634 | 93 | 43 | 2 | 13 | 104 | 8 | 86 | 1.61e-12 | 63.2 |
| MsG0480023465.01.T01 | AT1G49300 | 37.634 | 93 | 43 | 2 | 13 | 104 | 8 | 86 | 1.61e-12 | 63.2 |
| MsG0480023465.01.T01 | AT4G09720 | 29.545 | 176 | 78 | 6 | 13 | 156 | 8 | 169 | 2.55e-12 | 62.4 |
| MsG0480023465.01.T01 | AT4G09720 | 39.773 | 88 | 38 | 2 | 13 | 99 | 8 | 81 | 7.18e-12 | 61.6 |
Find 34 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCACTGCATTCAATAAAT+AGG | 0.259648 | 4:-85602409 | None:intergenic |
| CAGAAAATGGATTCGAGTTC+AGG | 0.266933 | 4:+85599765 | MsG0480023465.01.T01:exon |
| ATAGACTTTGCTAGGGAATA+TGG | 0.277032 | 4:+85602383 | MsG0480023465.01.T01:CDS |
| AAGCTTGCCATTTGGGATAC+TGG | 0.289194 | 4:+85600044 | MsG0480023465.01.T01:CDS |
| TTGTTAATGATTGGGGATTC+TGG | 0.299697 | 4:+85599816 | MsG0480023465.01.T01:CDS |
| AAAGCTTAAGCTTGCCATTT+GGG | 0.317285 | 4:+85600037 | MsG0480023465.01.T01:CDS |
| TGTTCAAATTGTTAATGATT+GGG | 0.336729 | 4:+85599808 | MsG0480023465.01.T01:CDS |
| ATGTTCAAATTGTTAATGAT+TGG | 0.346507 | 4:+85599807 | MsG0480023465.01.T01:CDS |
| ACCAAATAATGCAGCTGGTC+AGG | 0.352646 | 4:+85600419 | MsG0480023465.01.T01:intron |
| AAAAGCTTAAGCTTGCCATT+TGG | 0.383397 | 4:+85600036 | MsG0480023465.01.T01:CDS |
| GATGATCTCTCTCCCACCAT+TGG | 0.416793 | 4:+85599885 | MsG0480023465.01.T01:CDS |
| AAGAGGGAATAGACTTTGCT+AGG | 0.457004 | 4:+85602375 | MsG0480023465.01.T01:CDS |
| GTTCAAATTGTTAATGATTG+GGG | 0.472425 | 4:+85599809 | MsG0480023465.01.T01:CDS |
| GGTCAAATATGTCACGATAG+AGG | 0.481991 | 4:+85600010 | MsG0480023465.01.T01:CDS |
| TGTGTGACAGAATCAGAAAA+TGG | 0.498954 | 4:+85599752 | MsG0480023465.01.T01:intron |
| ATGATTGGGGATTCTGGTGT+TGG | 0.503280 | 4:+85599822 | MsG0480023465.01.T01:CDS |
| AGAAAATGGATTCGAGTTCA+GGG | 0.507840 | 4:+85599766 | MsG0480023465.01.T01:exon |
| TTGTATAGTACCCAATGAAA+AGG | 0.512553 | 4:-85599642 | None:intergenic |
| TAGAGTTGTGACAAAGAAAG+AGG | 0.518206 | 4:+85602358 | MsG0480023465.01.T01:CDS |
| GTCAAATATGTCACGATAGA+GGG | 0.528925 | 4:+85600011 | MsG0480023465.01.T01:CDS |
| AGAGTTGTGACAAAGAAAGA+GGG | 0.538991 | 4:+85602359 | MsG0480023465.01.T01:CDS |
| TAGTACCCAATGAAAAGGAC+AGG | 0.550018 | 4:-85599637 | None:intergenic |
| TCTTACTACAGAGGGGCTCA+AGG | 0.553803 | 4:+85600465 | MsG0480023465.01.T01:CDS |
| TGACAAGTTCTTACTACAGA+GGG | 0.566870 | 4:+85600457 | MsG0480023465.01.T01:CDS |
| GAAAGGAAACGAACCAATGG+TGG | 0.568646 | 4:-85599898 | None:intergenic |
| ATACATACCAGTATCCCAAA+TGG | 0.569683 | 4:-85600051 | None:intergenic |
| AGGGGCTCAAGGAATCATCA+TGG | 0.573145 | 4:+85600476 | MsG0480023465.01.T01:CDS |
| AGAGGGAATAGACTTTGCTA+GGG | 0.577586 | 4:+85602376 | MsG0480023465.01.T01:CDS |
| GGGGCTCAAGGAATCATCAT+GGG | 0.609277 | 4:+85600477 | MsG0480023465.01.T01:CDS |
| GAGATCATCAAAATCATCTG+AGG | 0.628890 | 4:-85599871 | None:intergenic |
| GTACTATTGGAAGAATTGAG+AGG | 0.635651 | 4:-85600524 | None:intergenic |
| AAAGGAAACGAACCAATGGT+GGG | 0.650141 | 4:-85599897 | None:intergenic |
| CTGACAAGTTCTTACTACAG+AGG | 0.693244 | 4:+85600456 | MsG0480023465.01.T01:CDS |
| GACAAGTTCTTACTACAGAG+GGG | 0.732850 | 4:+85600458 | MsG0480023465.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGAATATCATTAG+AGG | + | Chr4:85601936-85601955 | MsG0480023465.01.T01:intron | 15.0% |
| !! | AGATAGAATTAAATCAATTA+AGG | - | Chr4:85599927-85599946 | None:intergenic | 15.0% |
| !! | ATTTGACATAAAATTCTTAA+AGG | - | Chr4:85601344-85601363 | None:intergenic | 15.0% |
| !! | TAATAATCAATATCATCATT+GGG | - | Chr4:85600838-85600857 | None:intergenic | 15.0% |
| !! | TGTAAAATGTGAATTAATTT+AGG | - | Chr4:85600771-85600790 | None:intergenic | 15.0% |
| !!! | AAATTTATCCATGTATTTTT+TGG | + | Chr4:85601422-85601441 | MsG0480023465.01.T01:intron | 15.0% |
| !!! | TTATTTTGTAATCTTGTTAT+TGG | + | Chr4:85600156-85600175 | MsG0480023465.01.T01:CDS | 15.0% |
| !! | AAGTAGAATATCAATCAAAT+AGG | - | Chr4:85600390-85600409 | None:intergenic | 20.0% |
| !! | ACAGTAAATAAATGTACTAT+TGG | - | Chr4:85600540-85600559 | None:intergenic | 20.0% |
| !! | AGTAGAATATCAATCAAATA+GGG | - | Chr4:85600389-85600408 | None:intergenic | 20.0% |
| !! | ATGTTCAAATTGTTAATGAT+TGG | + | Chr4:85599807-85599826 | MsG0480023465.01.T01:CDS | 20.0% |
| !! | CTAATAATCAATATCATCAT+TGG | - | Chr4:85600839-85600858 | None:intergenic | 20.0% |
| !! | TAAATAAAACTCCAATCTAA+TGG | - | Chr4:85600139-85600158 | None:intergenic | 20.0% |
| !! | TAAATCAATTAAGGAATGAA+AGG | - | Chr4:85599918-85599937 | None:intergenic | 20.0% |
| !! | TAAATTAAATACCACATGAA+AGG | - | Chr4:85602107-85602126 | None:intergenic | 20.0% |
| !! | TAATTATTGGTAAAAGTTGA+TGG | - | Chr4:85600199-85600218 | None:intergenic | 20.0% |
| !! | TACCAATAATTAATCTTTAG+CGG | + | Chr4:85600207-85600226 | MsG0480023465.01.T01:intron | 20.0% |
| !! | TGTTCAAATTGTTAATGATT+GGG | + | Chr4:85599808-85599827 | MsG0480023465.01.T01:CDS | 20.0% |
| !!! | AATTATTTGTTTTCTGAGTA+GGG | + | Chr4:85600686-85600705 | MsG0480023465.01.T01:intron | 20.0% |
| !!! | GATATTGGTTTTTAGATTAA+AGG | + | Chr4:85600316-85600335 | MsG0480023465.01.T01:intron | 20.0% |
| ! | AACAAAATATAGAGGTAATC+AGG | - | Chr4:85601178-85601197 | None:intergenic | 25.0% |
| ! | AATGGACAAGGATTTAAAAA+TGG | - | Chr4:85600121-85600140 | None:intergenic | 25.0% |
| ! | ACCAATAATTAATCTTTAGC+GGG | + | Chr4:85600208-85600227 | MsG0480023465.01.T01:intron | 25.0% |
| ! | ATATATTCAGTGGATAGAAT+AGG | + | Chr4:85600594-85600613 | MsG0480023465.01.T01:intron | 25.0% |
| ! | ATATCAATCAAATAGGGTAT+TGG | - | Chr4:85600383-85600402 | None:intergenic | 25.0% |
| ! | ATGTCAAATCCTATAATGTA+AGG | - | Chr4:85602295-85602314 | None:intergenic | 25.0% |
| ! | GTTCAAATTGTTAATGATTG+GGG | + | Chr4:85599809-85599828 | MsG0480023465.01.T01:CDS | 25.0% |
| ! | TAAAGGCCAATTGTATATAT+GGG | + | Chr4:85600333-85600352 | MsG0480023465.01.T01:intron | 25.0% |
| ! | TAATAATCTGTAGGATTCAA+TGG | + | Chr4:85601004-85601023 | MsG0480023465.01.T01:intron | 25.0% |
| ! | TAGGTAAATATTTAACCATG+AGG | - | Chr4:85600752-85600771 | None:intergenic | 25.0% |
| ! | TATTGGGAAGACAATTTAAA+AGG | - | Chr4:85600366-85600385 | None:intergenic | 25.0% |
| ! | TCTTTCATCTAATAATCTGT+AGG | + | Chr4:85600995-85601014 | MsG0480023465.01.T01:intron | 25.0% |
| ! | TGATATCATTCATATTGCTT+GGG | + | Chr4:85600924-85600943 | MsG0480023465.01.T01:intron | 25.0% |
| ! | TTAAAGGCCAATTGTATATA+TGG | + | Chr4:85600332-85600351 | MsG0480023465.01.T01:intron | 25.0% |
| ! | TTCCTAAAAGTTATCATTTC+CGG | - | Chr4:85601913-85601932 | None:intergenic | 25.0% |
| ! | TTGATATCATTCATATTGCT+TGG | + | Chr4:85600923-85600942 | MsG0480023465.01.T01:intron | 25.0% |
| !! | AATGACATAGATTTTGAACA+AGG | - | Chr4:85601452-85601471 | None:intergenic | 25.0% |
| !! | ATTCAATCGTTAGCAAATTT+TGG | + | Chr4:85601511-85601530 | MsG0480023465.01.T01:intron | 25.0% |
| !! | CTTTAAACATCAAGTAGTTT+TGG | - | Chr4:85600718-85600737 | None:intergenic | 25.0% |
| !! | TACAAATATTGCAGTCATTT+TGG | - | Chr4:85601068-85601087 | None:intergenic | 25.0% |
| !! | TATCAATCAAATAGGGTATT+GGG | - | Chr4:85600382-85600401 | None:intergenic | 25.0% |
| !! | TCTTTTACATATGTAGAAGT+TGG | + | Chr4:85601799-85601818 | MsG0480023465.01.T01:intron | 25.0% |
| !! | TTTTTCTTGCCTTACATTAT+AGG | + | Chr4:85602283-85602302 | MsG0480023465.01.T01:intron | 25.0% |
| !!! | AGTCTTGATTTGTTGAATAA+AGG | - | Chr4:85601281-85601300 | None:intergenic | 25.0% |
| !!! | GAATTATTTGTTTTCTGAGT+AGG | + | Chr4:85600685-85600704 | MsG0480023465.01.T01:intron | 25.0% |
| !!! | TACAAATCTCTCTGAAATAT+GGG | + | Chr4:85601242-85601261 | MsG0480023465.01.T01:intron | 25.0% |
| !!! | TTACAAATCTCTCTGAAATA+TGG | + | Chr4:85601241-85601260 | MsG0480023465.01.T01:intron | 25.0% |
| !!! | TTGTTTTTCTAGTTTGCATT+TGG | + | Chr4:85601751-85601770 | MsG0480023465.01.T01:intron | 25.0% |
| !!! | TTTTGTAATCTTGTTATTGG+TGG | + | Chr4:85600159-85600178 | MsG0480023465.01.T01:CDS | 25.0% |
| AAAGGCCAATTGTATATATG+GGG | + | Chr4:85600334-85600353 | MsG0480023465.01.T01:intron | 30.0% | |
| AAGAATTGAGAGGCAAAAAA+GGG | - | Chr4:85600517-85600536 | None:intergenic | 30.0% | |
| ACTGACATGATTTGAATACA+AGG | - | Chr4:85601384-85601403 | None:intergenic | 30.0% | |
| CAACTTAATTGCATAACAGA+TGG | - | Chr4:85601734-85601753 | None:intergenic | 30.0% | |
| CATACAAATCATGAATTGCA+TGG | + | Chr4:85602131-85602150 | MsG0480023465.01.T01:intron | 30.0% | |
| CCAATAATTAATCTTTAGCG+GGG | + | Chr4:85600209-85600228 | MsG0480023465.01.T01:intron | 30.0% | |
| GCAATCTGTTTAATGATCTT+TGG | + | Chr4:85601094-85601113 | MsG0480023465.01.T01:intron | 30.0% | |
| GTAAAAGAAGACAATGAAGA+AGG | + | Chr4:85602070-85602089 | MsG0480023465.01.T01:intron | 30.0% | |
| TAAAAGTTATCATTTCCGGA+GGG | - | Chr4:85601909-85601928 | None:intergenic | 30.0% | |
| TAAACTTTATCATTTCCGGA+GGG | - | Chr4:85602003-85602022 | None:intergenic | 30.0% | |
| TAAATCCTTGTCCATTAGAT+TGG | + | Chr4:85600125-85600144 | MsG0480023465.01.T01:intron | 30.0% | |
| TAGCACTGCATTCAATAAAT+AGG | - | Chr4:85602412-85602431 | None:intergenic | 30.0% | |
| TCCCTAAACTTTATCATTTC+CGG | - | Chr4:85602007-85602026 | None:intergenic | 30.0% | |
| TCCGGAAATGATAAAGTTTA+GGG | + | Chr4:85602003-85602022 | MsG0480023465.01.T01:intron | 30.0% | |
| TCTATCCACTGAATATATCA+CGG | - | Chr4:85600592-85600611 | None:intergenic | 30.0% | |
| TGAATTCCAAGTTCTCTATA+AGG | - | Chr4:85601496-85601515 | None:intergenic | 30.0% | |
| TGTTGGAAACAAAGTAGATA+AGG | + | Chr4:85601314-85601333 | MsG0480023465.01.T01:intron | 30.0% | |
| TTAATTGCATAACAGATGGA+CGG | - | Chr4:85601730-85601749 | None:intergenic | 30.0% | |
| TTATAGGATTTGACATGTGT+TGG | + | Chr4:85602299-85602318 | MsG0480023465.01.T01:intron | 30.0% | |
| TTGACACTTCTGCTTATTTA+AGG | + | Chr4:85601656-85601675 | MsG0480023465.01.T01:intron | 30.0% | |
| TTGTATAGTACCCAATGAAA+AGG | - | Chr4:85599645-85599664 | None:intergenic | 30.0% | |
| TTTCTTCCTTATAGAGAACT+TGG | + | Chr4:85601487-85601506 | MsG0480023465.01.T01:intron | 30.0% | |
| ! | ATGTTTGTGCTTGTATTTTC+AGG | + | Chr4:85602328-85602347 | MsG0480023465.01.T01:intron | 30.0% |
| ! | CTGTTATCACATTTGTTTCT+AGG | + | Chr4:85602219-85602238 | MsG0480023465.01.T01:intron | 30.0% |
| ! | TCATAAACTGCATCAGTTTT+GGG | - | Chr4:85601201-85601220 | None:intergenic | 30.0% |
| !! | AGCTTCGATTTTGATAAGAA+TGG | - | Chr4:85600878-85600897 | None:intergenic | 30.0% |
| !! | CTGCTTATTTAAGGTGTTTT+TGG | + | Chr4:85601665-85601684 | MsG0480023465.01.T01:intron | 30.0% |
| !! | GTTTAATGATCTTTGGAGTT+GGG | + | Chr4:85601101-85601120 | MsG0480023465.01.T01:intron | 30.0% |
| !! | TGTTTAATGATCTTTGGAGT+TGG | + | Chr4:85601100-85601119 | MsG0480023465.01.T01:intron | 30.0% |
| !!! | GTTTTGGGAACAAAATATAG+AGG | - | Chr4:85601186-85601205 | None:intergenic | 30.0% |
| !!! | TATCACAGGTGTTGATTTTA+AGG | + | Chr4:85599989-85600008 | MsG0480023465.01.T01:intron | 30.0% |
| AAAAGCTTAAGCTTGCCATT+TGG | + | Chr4:85600036-85600055 | MsG0480023465.01.T01:CDS | 35.0% | |
| AAGAATACAGCAATCCAGAT+TGG | - | Chr4:85600623-85600642 | None:intergenic | 35.0% | |
| AAGGCAAGCCAAAAAATACA+TGG | - | Chr4:85601433-85601452 | None:intergenic | 35.0% | |
| AAGGCCAATTGTATATATGG+GGG | + | Chr4:85600335-85600354 | MsG0480023465.01.T01:intron | 35.0% | |
| AATGAAAGGAAACGAACCAA+TGG | - | Chr4:85599904-85599923 | None:intergenic | 35.0% | |
| ACGAAAAAATGTGGTTGCAA+GGG | - | Chr4:85600239-85600258 | None:intergenic | 35.0% | |
| AGAGTTGTGACAAAGAAAGA+GGG | + | Chr4:85602359-85602378 | MsG0480023465.01.T01:CDS | 35.0% | |
| ATACATACCAGTATCCCAAA+TGG | - | Chr4:85600054-85600073 | None:intergenic | 35.0% | |
| ATAGACTTTGCTAGGGAATA+TGG | + | Chr4:85602383-85602402 | MsG0480023465.01.T01:CDS | 35.0% | |
| ATGCAGTTTATGACGTAACA+CGG | + | Chr4:85601208-85601227 | MsG0480023465.01.T01:intron | 35.0% | |
| CACGCATCAACTTAAAGAAA+AGG | - | Chr4:85601133-85601152 | None:intergenic | 35.0% | |
| CACTTGGAACAATGTGATAT+TGG | + | Chr4:85600301-85600320 | MsG0480023465.01.T01:intron | 35.0% | |
| CCCCGCTAAAGATTAATTAT+TGG | - | Chr4:85600212-85600231 | None:intergenic | 35.0% | |
| CTAAAAGTTATCATTTCCGG+AGG | - | Chr4:85601910-85601929 | None:intergenic | 35.0% | |
| CTAAACTTTATCATTTCCGG+AGG | - | Chr4:85602004-85602023 | None:intergenic | 35.0% | |
| CTAACAAAGAAAGTCCAACT+TGG | - | Chr4:85601030-85601049 | None:intergenic | 35.0% | |
| CTCCGGAAATGATAAAGTTT+AGG | + | Chr4:85602002-85602021 | MsG0480023465.01.T01:intron | 35.0% | |
| GAAGAATTGAGAGGCAAAAA+AGG | - | Chr4:85600518-85600537 | None:intergenic | 35.0% | |
| GACTTTCTTTGTTAGTGATG+GGG | + | Chr4:85601035-85601054 | MsG0480023465.01.T01:intron | 35.0% | |
| GAGATCATCAAAATCATCTG+AGG | - | Chr4:85599874-85599893 | None:intergenic | 35.0% | |
| GGACTTTCTTTGTTAGTGAT+GGG | + | Chr4:85601034-85601053 | MsG0480023465.01.T01:intron | 35.0% | |
| GTACTATTGGAAGAATTGAG+AGG | - | Chr4:85600527-85600546 | None:intergenic | 35.0% | |
| GTCAAATATGTCACGATAGA+GGG | + | Chr4:85600011-85600030 | MsG0480023465.01.T01:CDS | 35.0% | |
| TAATTGCATAACAGATGGAC+GGG | - | Chr4:85601729-85601748 | None:intergenic | 35.0% | |
| TAGAGTTGTGACAAAGAAAG+AGG | + | Chr4:85602358-85602377 | MsG0480023465.01.T01:CDS | 35.0% | |
| TGAAATGAGACCATGCTTAA+GGG | + | Chr4:85600263-85600282 | MsG0480023465.01.T01:intron | 35.0% | |
| TGACAAGTTCTTACTACAGA+GGG | + | Chr4:85600457-85600476 | MsG0480023465.01.T01:CDS | 35.0% | |
| TGGACTTTCTTTGTTAGTGA+TGG | + | Chr4:85601033-85601052 | MsG0480023465.01.T01:intron | 35.0% | |
| TGTAAAACTGAGAGTCCAAA+TGG | - | Chr4:85602160-85602179 | None:intergenic | 35.0% | |
| TGTGTGACAGAATCAGAAAA+TGG | + | Chr4:85599752-85599771 | MsG0480023465.01.T01:intron | 35.0% | |
| TTGAAATGAGACCATGCTTA+AGG | + | Chr4:85600262-85600281 | MsG0480023465.01.T01:intron | 35.0% | |
| TTGTTAATGATTGGGGATTC+TGG | + | Chr4:85599816-85599835 | MsG0480023465.01.T01:CDS | 35.0% | |
| TTTCAAGCCACGAAAAAATG+TGG | - | Chr4:85600248-85600267 | None:intergenic | 35.0% | |
| TTTGTTTGCATCCTTTCATG+TGG | + | Chr4:85602093-85602112 | MsG0480023465.01.T01:intron | 35.0% | |
| ! | AAACTCCAATCTAATGGACA+AGG | - | Chr4:85600133-85600152 | None:intergenic | 35.0% |
| ! | AAAGCTTAAGCTTGCCATTT+GGG | + | Chr4:85600037-85600056 | MsG0480023465.01.T01:CDS | 35.0% |
| ! | AGAAAATGGATTCGAGTTCA+GGG | + | Chr4:85599766-85599785 | MsG0480023465.01.T01:exon | 35.0% |
| ! | CTAACAAATCAGTTGTTTCC+AGG | - | Chr4:85600967-85600986 | None:intergenic | 35.0% |
| ! | CTCCGGAAATGATAACTTTT+AGG | + | Chr4:85601908-85601927 | MsG0480023465.01.T01:intron | 35.0% |
| ! | GCGTGTTGAAAACTTAGTTT+TGG | + | Chr4:85601148-85601167 | MsG0480023465.01.T01:intron | 35.0% |
| ! | GTCATAAACTGCATCAGTTT+TGG | - | Chr4:85601202-85601221 | None:intergenic | 35.0% |
| ! | GTTTTACCAAATAATGCAGC+TGG | + | Chr4:85600414-85600433 | MsG0480023465.01.T01:intron | 35.0% |
| ! | TCATTCCTGTCCTTTTCATT+GGG | + | Chr4:85599632-85599651 | MsG0480023465.01.T01:five_prime_UTR | 35.0% |
| ! | TTCATTCCTGTCCTTTTCAT+TGG | + | Chr4:85599631-85599650 | MsG0480023465.01.T01:five_prime_UTR | 35.0% |
| !! | AATATTGCAGTCATTTTGGC+AGG | - | Chr4:85601064-85601083 | None:intergenic | 35.0% |
| !! | ATATTGCAGTCATTTTGGCA+GGG | - | Chr4:85601063-85601082 | None:intergenic | 35.0% |
| !! | TTGTGCTTGTATTTTCAGGA+GGG | + | Chr4:85602332-85602351 | MsG0480023465.01.T01:intron | 35.0% |
| !! | TTGTTTTGTGCTTTTGCTTC+TGG | + | Chr4:85601861-85601880 | MsG0480023465.01.T01:intron | 35.0% |
| !! | TTTGTGCTTGTATTTTCAGG+AGG | + | Chr4:85602331-85602350 | MsG0480023465.01.T01:intron | 35.0% |
| !!! | AAAGCTTTTTTGTTGCCTCA+TGG | + | Chr4:85600734-85600753 | MsG0480023465.01.T01:intron | 35.0% |
| !!! | CTTTGAAGAGCTTGTTTTGA+AGG | + | Chr4:85602457-85602476 | MsG0480023465.01.T01:CDS | 35.0% |
| AAAGGAAACGAACCAATGGT+GGG | - | Chr4:85599900-85599919 | None:intergenic | 40.0% | |
| AAGAGGGAATAGACTTTGCT+AGG | + | Chr4:85602375-85602394 | MsG0480023465.01.T01:CDS | 40.0% | |
| AGAGGCAAAAAAGGGAGAAT+AGG | - | Chr4:85600509-85600528 | None:intergenic | 40.0% | |
| AGAGGGAATAGACTTTGCTA+GGG | + | Chr4:85602376-85602395 | MsG0480023465.01.T01:CDS | 40.0% | |
| CAACACCTGTGATAGATAGT+AGG | - | Chr4:85599983-85600002 | None:intergenic | 40.0% | |
| CACATTGTTCCAAGTGAAAG+TGG | - | Chr4:85600297-85600316 | None:intergenic | 40.0% | |
| CACGAAAAAATGTGGTTGCA+AGG | - | Chr4:85600240-85600259 | None:intergenic | 40.0% | |
| CGATCTGCGATTTACTTAGA+AGG | - | Chr4:85601557-85601576 | None:intergenic | 40.0% | |
| CTCTCCCCCATATATACAAT+TGG | - | Chr4:85600342-85600361 | None:intergenic | 40.0% | |
| CTGACAAGTTCTTACTACAG+AGG | + | Chr4:85600456-85600475 | MsG0480023465.01.T01:CDS | 40.0% | |
| GAATATCAGCCAGTATATCC+TGG | + | Chr4:85600946-85600965 | MsG0480023465.01.T01:intron | 40.0% | |
| GACAAGTTCTTACTACAGAG+GGG | + | Chr4:85600458-85600477 | MsG0480023465.01.T01:CDS | 40.0% | |
| GATAGAATAGGATGCCAATC+TGG | + | Chr4:85600606-85600625 | MsG0480023465.01.T01:intron | 40.0% | |
| GATCCAAATCCACTTTCACT+TGG | + | Chr4:85600285-85600304 | MsG0480023465.01.T01:intron | 40.0% | |
| GATGACCGTGATATATTCAG+TGG | + | Chr4:85600584-85600603 | MsG0480023465.01.T01:intron | 40.0% | |
| GGTCAAATATGTCACGATAG+AGG | + | Chr4:85600010-85600029 | MsG0480023465.01.T01:CDS | 40.0% | |
| TAGTACCCAATGAAAAGGAC+AGG | - | Chr4:85599640-85599659 | None:intergenic | 40.0% | |
| TCTAAGTAAATCGCAGATCG+CGG | + | Chr4:85601557-85601576 | MsG0480023465.01.T01:intron | 40.0% | |
| TGAATTGCATGGACTCCATT+TGG | + | Chr4:85602142-85602161 | MsG0480023465.01.T01:intron | 40.0% | |
| ! | CAGAAAATGGATTCGAGTTC+AGG | + | Chr4:85599765-85599784 | MsG0480023465.01.T01:exon | 40.0% |
| ! | CAGTTGTTTCCAGGATATAC+TGG | - | Chr4:85600958-85600977 | None:intergenic | 40.0% |
| ! | GTTCCAAGTGAAAGTGGATT+TGG | - | Chr4:85600291-85600310 | None:intergenic | 40.0% |
| ! | TTGTTTTCTGAGTAGGGCTA+AGG | + | Chr4:85600692-85600711 | MsG0480023465.01.T01:intron | 40.0% |
| !! | GGAAGAAAACTTTAAAGCGC+TGG | - | Chr4:85601475-85601494 | None:intergenic | 40.0% |
| !! | TCATTTTTCTGACCTCTGCT+GGG | + | Chr4:85600800-85600819 | MsG0480023465.01.T01:intron | 40.0% |
| !! | TCTCTCTGAAATATGGGCAA+AGG | + | Chr4:85601248-85601267 | MsG0480023465.01.T01:intron | 40.0% |
| !! | TTTAGAGAGTACTGCAGAGA+AGG | + | Chr4:85601618-85601637 | MsG0480023465.01.T01:intron | 40.0% |
| !!! | CTTGCAACCACATTTTTTCG+TGG | + | Chr4:85600238-85600257 | MsG0480023465.01.T01:intron | 40.0% |
| AAACTCCTGCAGAAACATGC+TGG | - | Chr4:85601780-85601799 | None:intergenic | 45.0% | |
| ACCAAATAATGCAGCTGGTC+AGG | + | Chr4:85600419-85600438 | MsG0480023465.01.T01:intron | 45.0% | |
| AGCATGATTGCTTATCCCTC+CGG | + | Chr4:85601891-85601910 | MsG0480023465.01.T01:intron | 45.0% | |
| ATCACGGTCATCAATACTCG+AGG | - | Chr4:85600576-85600595 | None:intergenic | 45.0% | |
| ATGATTGGGGATTCTGGTGT+TGG | + | Chr4:85599822-85599841 | MsG0480023465.01.T01:CDS | 45.0% | |
| CGTCTCCTACTATCTATCAC+AGG | + | Chr4:85599975-85599994 | MsG0480023465.01.T01:intron | 45.0% | |
| GAAAGGAAACGAACCAATGG+TGG | - | Chr4:85599901-85599920 | None:intergenic | 45.0% | |
| GACTGCATGAAGATGCTTGT+TGG | + | Chr4:85601297-85601316 | MsG0480023465.01.T01:intron | 45.0% | |
| GGATTTGGATCCCTTAAGCA+TGG | - | Chr4:85600276-85600295 | None:intergenic | 45.0% | |
| GTAGGATTCAATGGCCAAGT+TGG | + | Chr4:85601013-85601032 | MsG0480023465.01.T01:intron | 45.0% | |
| TCCTGACCAGCTGCATTATT+TGG | - | Chr4:85600423-85600442 | None:intergenic | 45.0% | |
| ! | AAGCTTGCCATTTGGGATAC+TGG | + | Chr4:85600044-85600063 | MsG0480023465.01.T01:CDS | 45.0% |
| !!! | GAGGAAAGTGCTTTTGCTTC+TGG | + | Chr4:85601955-85601974 | MsG0480023465.01.T01:intron | 45.0% |
| !!! | GTCATTTTTCTGACCTCTGC+TGG | + | Chr4:85600799-85600818 | MsG0480023465.01.T01:intron | 45.0% |
| AGGGGCTCAAGGAATCATCA+TGG | + | Chr4:85600476-85600495 | MsG0480023465.01.T01:CDS | 50.0% | |
| GATGATCTCTCTCCCACCAT+TGG | + | Chr4:85599885-85599904 | MsG0480023465.01.T01:CDS | 50.0% | |
| GGGGCTCAAGGAATCATCAT+GGG | + | Chr4:85600477-85600496 | MsG0480023465.01.T01:CDS | 50.0% | |
| TCAGCAAACATTCCCAGCAG+AGG | - | Chr4:85600815-85600834 | None:intergenic | 50.0% | |
| TCGCAGATCGCGGAAAATAG+CGG | + | Chr4:85601567-85601586 | MsG0480023465.01.T01:intron | 50.0% | |
| TCTTACTACAGAGGGGCTCA+AGG | + | Chr4:85600465-85600484 | MsG0480023465.01.T01:CDS | 50.0% | |
| ! | GGTTACCAGCATGTTTCTGC+AGG | + | Chr4:85601772-85601791 | MsG0480023465.01.T01:intron | 50.0% |
| !! | AGAGAGTACTGCAGAGAAGG+AGG | + | Chr4:85601621-85601640 | MsG0480023465.01.T01:intron | 50.0% |
| !! | GAGAGTACTGCAGAGAAGGA+GGG | + | Chr4:85601622-85601641 | MsG0480023465.01.T01:intron | 50.0% |
| TACTGCAGAGAAGGAGGGTG+AGG | + | Chr4:85601627-85601646 | MsG0480023465.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 85599613 | 85602487 | 85599613 | ID=MsG0480023465.01;Name=MsG0480023465.01 |
| Chr4 | mRNA | 85599613 | 85602487 | 85599613 | ID=MsG0480023465.01.T01;Parent=MsG0480023465.01;Name=MsG0480023465.01.T01;_AED=0.50;_eAED=0.58;_QI=50|0.4|0.33|1|0.2|0.16|6|0|164 |
| Chr4 | exon | 85599613 | 85599653 | 85599613 | ID=MsG0480023465.01.T01:exon:2885;Parent=MsG0480023465.01.T01 |
| Chr4 | exon | 85599762 | 85599906 | 85599762 | ID=MsG0480023465.01.T01:exon:2886;Parent=MsG0480023465.01.T01 |
| Chr4 | exon | 85599997 | 85600069 | 85599997 | ID=MsG0480023465.01.T01:exon:2887;Parent=MsG0480023465.01.T01 |
| Chr4 | exon | 85600143 | 85600180 | 85600143 | ID=MsG0480023465.01.T01:exon:2888;Parent=MsG0480023465.01.T01 |
| Chr4 | exon | 85600433 | 85600542 | 85600433 | ID=MsG0480023465.01.T01:exon:2889;Parent=MsG0480023465.01.T01 |
| Chr4 | exon | 85602350 | 85602487 | 85602350 | ID=MsG0480023465.01.T01:exon:2890;Parent=MsG0480023465.01.T01 |
| Chr4 | five_prime_UTR | 85599613 | 85599653 | 85599613 | ID=MsG0480023465.01.T01:five_prime_utr;Parent=MsG0480023465.01.T01 |
| Chr4 | five_prime_UTR | 85599762 | 85599770 | 85599762 | ID=MsG0480023465.01.T01:five_prime_utr;Parent=MsG0480023465.01.T01 |
| Chr4 | CDS | 85599771 | 85599906 | 85599771 | ID=MsG0480023465.01.T01:cds;Parent=MsG0480023465.01.T01 |
| Chr4 | CDS | 85599997 | 85600069 | 85599997 | ID=MsG0480023465.01.T01:cds;Parent=MsG0480023465.01.T01 |
| Chr4 | CDS | 85600143 | 85600180 | 85600143 | ID=MsG0480023465.01.T01:cds;Parent=MsG0480023465.01.T01 |
| Chr4 | CDS | 85600433 | 85600542 | 85600433 | ID=MsG0480023465.01.T01:cds;Parent=MsG0480023465.01.T01 |
| Chr4 | CDS | 85602350 | 85602487 | 85602350 | ID=MsG0480023465.01.T01:cds;Parent=MsG0480023465.01.T01 |
| Gene Sequence |
| Protein sequence |
