AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030841.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030841.01.T01 MTR_6g012860 97.738 221 5 0 1 221 1 221 9.36e-162 446
MsG0680030841.01.T01 MTR_7g011570 82.805 221 38 0 1 221 1 221 3.45e-135 379
MsG0680030841.01.T01 MTR_7g011570 82.805 221 38 0 1 221 83 303 9.12e-134 378
MsG0680030841.01.T01 MTR_3g037380 68.636 220 69 0 1 220 1 220 2.46e-114 326
MsG0680030841.01.T01 MTR_5g042530 63.636 220 79 1 1 219 1 220 4.00e-103 297
MsG0680030841.01.T01 MTR_3g037380 67.273 165 54 0 55 219 1 165 4.37e-80 237
MsG0680030841.01.T01 MTR_5g042530 63.030 165 61 0 55 219 1 165 5.59e-74 221
MsG0680030841.01.T02 MTR_6g012860 97.738 221 5 0 1 221 1 221 9.36e-162 446
MsG0680030841.01.T02 MTR_7g011570 82.805 221 38 0 1 221 1 221 3.45e-135 379
MsG0680030841.01.T02 MTR_7g011570 82.805 221 38 0 1 221 83 303 9.12e-134 378
MsG0680030841.01.T02 MTR_3g037380 68.636 220 69 0 1 220 1 220 2.46e-114 326
MsG0680030841.01.T02 MTR_5g042530 63.636 220 79 1 1 219 1 220 4.00e-103 297
MsG0680030841.01.T02 MTR_3g037380 67.273 165 54 0 55 219 1 165 4.37e-80 237
MsG0680030841.01.T02 MTR_5g042530 63.030 165 61 0 55 219 1 165 5.59e-74 221
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030841.01.T01 AT3G29100 75.113 221 55 0 1 221 1 221 1.19e-125 354
MsG0680030841.01.T01 AT5G39510 74.661 221 56 0 1 221 1 221 8.76e-117 332
MsG0680030841.01.T01 AT1G26670 66.364 220 73 1 1 219 1 220 2.09e-108 311
MsG0680030841.01.T01 AT3G29100 75.294 170 42 0 52 221 26 195 1.23e-93 272
MsG0680030841.01.T01 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T01 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T01 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T01 AT5G39630 44.796 221 108 2 1 221 1 207 5.42e-57 180
MsG0680030841.01.T02 AT3G29100 75.113 221 55 0 1 221 1 221 1.19e-125 354
MsG0680030841.01.T02 AT5G39510 74.661 221 56 0 1 221 1 221 8.76e-117 332
MsG0680030841.01.T02 AT1G26670 66.364 220 73 1 1 219 1 220 2.09e-108 311
MsG0680030841.01.T02 AT3G29100 75.294 170 42 0 52 221 26 195 1.23e-93 272
MsG0680030841.01.T02 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T02 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T02 AT3G29100 76.048 167 40 0 55 221 1 167 1.46e-92 268
MsG0680030841.01.T02 AT5G39630 44.796 221 108 2 1 221 1 207 5.42e-57 180

Find 24 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAACAAGTTTGAAGTAT+AGG 0.376074 6:+10282605 None:intergenic
TGGCTGCATTGTGCTTGTCC+TGG 0.390726 6:-10282647 MsG0680030841.01.T01:CDS
TAAGCCCACATGCAGCTTCA+TGG 0.391587 6:-10282748 MsG0680030841.01.T01:intron
AACAAGAACAAGTGGATCAT+TGG 0.416473 6:-10282667 MsG0680030841.01.T01:CDS
CAACATAACCACGAAGAATC+TGG 0.428108 6:+10282331 None:intergenic
CATTGGCATGTGTCTTATGC+CGG 0.442753 6:-10282415 MsG0680030841.01.T01:three_prime_UTR
AAGGCCTACTTGTCCTCGTA+TGG 0.459019 6:-10282576 MsG0680030841.01.T01:three_prime_UTR
TTATAAAACCAGATTCTTCG+TGG 0.469379 6:-10282339 MsG0680030841.01.T01:three_prime_UTR
AAACTTGTTAAATAGTCAAA+AGG 0.474593 6:-10282595 MsG0680030841.01.T01:exon
TCTTATTCTGATTTATGAGT+GGG 0.474932 6:-10282507 MsG0680030841.01.T01:three_prime_UTR
TTCTTATTCTGATTTATGAG+TGG 0.492841 6:-10282508 MsG0680030841.01.T01:three_prime_UTR
AATTAAAATCTTGCAACAGC+CGG 0.504693 6:+10282360 None:intergenic
GCAAGTTAACTTGACAATGT+TGG 0.517601 6:-10282455 MsG0680030841.01.T01:three_prime_UTR
ATTGGCATGTGTCTTATGCC+GGG 0.520315 6:-10282414 MsG0680030841.01.T01:three_prime_UTR
GAAGAATGAACAAGAACAAG+TGG 0.536509 6:-10282675 MsG0680030841.01.T01:CDS
AGGCCTACTTGTCCTCGTAT+GGG 0.587378 6:-10282575 MsG0680030841.01.T01:three_prime_UTR
CATGGTGTGGATGATAACAT+AGG 0.607624 6:-10282730 MsG0680030841.01.T01:CDS
ACACCATAGAAATAGAATGC+AGG 0.612192 6:+10282235 None:intergenic
GAACCCATACGAGGACAAGT+AGG 0.616831 6:+10282572 None:intergenic
AATTTCATAAATTACAAACC+CGG 0.622185 6:+10282396 None:intergenic
CGGCATAAGACACATGCCAA+TGG 0.632191 6:+10282416 None:intergenic
CATATTTATGAACCCATACG+AGG 0.669505 6:+10282563 None:intergenic
TTGCAATGATAGCAACAACC+AGG 0.682704 6:+10282629 None:intergenic
CCACATGCAGCTTCATGGTG+TGG 0.684475 6:-10282743 MsG0680030841.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTATTTATAAAT+TGG + Chr6:10282532-10282551 None:intergenic 0.0%
!!! ATACTAGTATTATTATTTTT+TGG + Chr6:10284012-10284031 None:intergenic 10.0%
!!! GAAAAAAAAAGTATAAATTT+GGG - Chr6:10284639-10284658 MsG0680030841.01.T01:intron 10.0%
!! AAGAGAAATTAGATAAATTT+GGG + Chr6:10284749-10284768 None:intergenic 15.0%
!! AAGTTGTAAGATTATTTAAT+TGG - Chr6:10284829-10284848 MsG0680030841.01.T01:intron 15.0%
!! AATTTCTATTTGCATAATTA+TGG - Chr6:10285837-10285856 MsG0680030841.01.T01:intron 15.0%
!! ATTTCCAACTATAATATTAA+AGG + Chr6:10285976-10285995 None:intergenic 15.0%
!! TTAAATCCATTATTTAAACT+CGG + Chr6:10282885-10282904 None:intergenic 15.0%
!!! AATATGGAAATTCTTTTATA+AGG - Chr6:10283336-10283355 MsG0680030841.01.T01:CDS 15.0%
!!! ATATGGAAATTCTTTTATAA+GGG - Chr6:10283337-10283356 MsG0680030841.01.T01:CDS 15.0%
!!! GGAAAAAAAAAGTATAAATT+TGG - Chr6:10284638-10284657 MsG0680030841.01.T01:intron 15.0%
!!! TATTTTTATAGCATCTATAT+GGG + Chr6:10283774-10283793 None:intergenic 15.0%
!! AATCCATCATTTCTTATAAA+CGG - Chr6:10282903-10282922 MsG0680030841.01.T01:intron 20.0%
!! AATTTCATAAATTACAAACC+CGG + Chr6:10286635-10286654 None:intergenic 20.0%
!! ATAATAAAGTTAACGATTCA+AGG + Chr6:10284485-10284504 None:intergenic 20.0%
!! ATGTTGAATGATATTACTAA+TGG + Chr6:10284391-10284410 None:intergenic 20.0%
!! CAAATTTATCTAATTTCTCT+TGG - Chr6:10284748-10284767 MsG0680030841.01.T01:intron 20.0%
!! CAAGAGAAATTAGATAAATT+TGG + Chr6:10284750-10284769 None:intergenic 20.0%
!! GTTTCCTTTAATATTATAGT+TGG - Chr6:10285969-10285988 MsG0680030841.01.T01:intron 20.0%
!! TAAATCCATTATTTAAACTC+GGG + Chr6:10282884-10282903 None:intergenic 20.0%
!! TAGAATATGCAAATTCTAAA+AGG - Chr6:10282801-10282820 MsG0680030841.01.T01:intron 20.0%
!! TGTTGAATGATATTACTAAT+GGG + Chr6:10284390-10284409 None:intergenic 20.0%
!! TTTCATGAATATGTTAAACT+CGG + Chr6:10285033-10285052 None:intergenic 20.0%
!!! AAACTTGTTAAATAGTCAAA+AGG - Chr6:10286433-10286452 MsG0680030841.01.T01:intron 20.0%
!!! AATTTTACAATGATCGAATT+AGG - Chr6:10282475-10282494 MsG0680030841.01.T01:three_prime_UTR 20.0%
!!! ACTTTGTTTTGATTTTTCAA+TGG - Chr6:10282706-10282725 MsG0680030841.01.T01:CDS 20.0%
!!! ATTTAACAAGTTTGAAGTAT+AGG + Chr6:10286426-10286445 None:intergenic 20.0%
!!! ATTTTACAATGATCGAATTA+GGG - Chr6:10282476-10282495 MsG0680030841.01.T01:three_prime_UTR 20.0%
!!! GAAATTAAAAACCATTTTTG+TGG - Chr6:10285991-10286010 MsG0680030841.01.T01:intron 20.0%
!!! GAAATTTGTATTTTTTTGAC+CGG - Chr6:10286649-10286668 MsG0680030841.01.T01:intron 20.0%
!!! GTATTTTTATAGCATCTATA+TGG + Chr6:10283775-10283794 None:intergenic 20.0%
!!! TAGCTCCTATTATTTTTATT+TGG - Chr6:10283713-10283732 MsG0680030841.01.T01:CDS 20.0%
!!! TTGTTTTATGATTATGATGA+TGG - Chr6:10282732-10282751 MsG0680030841.01.T01:CDS 20.0%
!!! TTTTCTTAACTTCACTTTTA+AGG + Chr6:10285407-10285426 None:intergenic 20.0%
! AAAGTGAAAAACAAAGAACT+TGG + Chr6:10284456-10284475 None:intergenic 25.0%
! AAATTAGATAAATTTGGGAG+AGG + Chr6:10284744-10284763 None:intergenic 25.0%
! AATAAAGCCATCTTTCAAAA+TGG + Chr6:10285241-10285260 None:intergenic 25.0%
! AATTATGGTGTAAGTTTCTT+GGG - Chr6:10285852-10285871 MsG0680030841.01.T01:intron 25.0%
! ACCAAAAAGAACAAAAACAA+GGG + Chr6:10284920-10284939 None:intergenic 25.0%
! AGAGATATTAGGAAAATCAA+GGG + Chr6:10284351-10284370 None:intergenic 25.0%
! ATAACACGACAAAAATTTGT+TGG + Chr6:10283680-10283699 None:intergenic 25.0%
! CCTGACCAAATAAAAATAAT+AGG + Chr6:10283721-10283740 None:intergenic 25.0%
! GAAGTTAAGAAAATTGTATC+TGG - Chr6:10285414-10285433 MsG0680030841.01.T01:intron 25.0%
! GAATTTGTAGATTCGAAAAA+TGG - Chr6:10285299-10285318 MsG0680030841.01.T01:intron 25.0%
! GCAAAAGAAGCAAAAAATTT+CGG - Chr6:10285164-10285183 MsG0680030841.01.T01:intron 25.0%
! TAACATGGTTTATGAAAGTT+TGG - Chr6:10286050-10286069 MsG0680030841.01.T01:intron 25.0%
! TAATAGGAGCTAAAAAGATT+TGG + Chr6:10283705-10283724 None:intergenic 25.0%
! TAATTATGGTGTAAGTTTCT+TGG - Chr6:10285851-10285870 MsG0680030841.01.T01:intron 25.0%
! TAGAGATATTAGGAAAATCA+AGG + Chr6:10284352-10284371 None:intergenic 25.0%
! TCTTATTCTGATTTATGAGT+GGG - Chr6:10286521-10286540 MsG0680030841.01.T01:intron 25.0%
! TTCTTATTCTGATTTATGAG+TGG - Chr6:10286520-10286539 MsG0680030841.01.T01:intron 25.0%
!! AAAAAGTATAAATTTGGGAG+AGG - Chr6:10284644-10284663 MsG0680030841.01.T01:intron 25.0%
!! AAACAACCAAAAAAACCTTT+TGG + Chr6:10286172-10286191 None:intergenic 25.0%
!! AATTTCCATATTCTCTTTTC+TGG + Chr6:10283328-10283347 None:intergenic 25.0%
!! ATTCTTTTATAAGGGTTCAT+AGG - Chr6:10283345-10283364 MsG0680030841.01.T01:CDS 25.0%
!! ATTTCCATATTCTCTTTTCT+GGG + Chr6:10283327-10283346 None:intergenic 25.0%
!! TTCTTTTATAAGGGTTCATA+GGG - Chr6:10283346-10283365 MsG0680030841.01.T01:CDS 25.0%
!!! ATTTTTGAAGCATTAGCTAT+AGG - Chr6:10285063-10285082 MsG0680030841.01.T01:intron 25.0%
!!! CCTATTATTTTTATTTGGTC+AGG - Chr6:10283718-10283737 MsG0680030841.01.T01:CDS 25.0%
!!! GACAAGATACAATGATTTTT+TGG - Chr6:10286487-10286506 MsG0680030841.01.T01:intron 25.0%
!!! GGTTGCAATTTTAAGTTTTA+CGG + Chr6:10283970-10283989 None:intergenic 25.0%
!!! TAGAAAAAATGGGGTATTTT+TGG - Chr6:10284090-10284109 MsG0680030841.01.T01:intron 25.0%
!!! TATTTTTATTTGGTCAGGAT+TGG - Chr6:10283723-10283742 MsG0680030841.01.T01:intron 25.0%
!!! TTTTGTTCCATTTTGAAAGA+TGG - Chr6:10285231-10285250 MsG0680030841.01.T01:intron 25.0%
AAAAACTGCTACTAGATAGT+TGG + Chr6:10285911-10285930 None:intergenic 30.0%
AAAATTGCAACCAAGATAGA+GGG - Chr6:10283978-10283997 MsG0680030841.01.T01:intron 30.0%
AATGGCATATAGCATGAATT+AGG - Chr6:10283588-10283607 MsG0680030841.01.T01:CDS 30.0%
AATTAAAATCTTGCAACAGC+CGG + Chr6:10286671-10286690 None:intergenic 30.0%
ACAACTTGAAGAAACAAACA+TGG + Chr6:10284816-10284835 None:intergenic 30.0%
ACAGTAGTCATAGAGATATT+AGG + Chr6:10284362-10284381 None:intergenic 30.0%
ACATAGTAATACTAGAACAG+TGG - Chr6:10284038-10284057 MsG0680030841.01.T01:intron 30.0%
ACCTAAAGTATGTCAAAGAA+AGG + Chr6:10283560-10283579 None:intergenic 30.0%
ACCTTTCTTTGACATACTTT+AGG - Chr6:10283556-10283575 MsG0680030841.01.T01:CDS 30.0%
ACTAAAATTACGCGTTCAAT+GGG + Chr6:10282982-10283001 None:intergenic 30.0%
AGAATCCCGATTTAATGTAA+TGG + Chr6:10284207-10284226 None:intergenic 30.0%
AGTCCTAAAATTAAGAGTCT+GGG + Chr6:10284710-10284729 None:intergenic 30.0%
ATACCTAATGCAATCACAAA+AGG + Chr6:10285577-10285596 None:intergenic 30.0%
ATTAGAAACTACGTGCTTAT+CGG - Chr6:10284617-10284636 MsG0680030841.01.T01:intron 30.0%
CATCATTTCTTATAAACGGA+GGG - Chr6:10282907-10282926 MsG0680030841.01.T01:intron 30.0%
CCCATTCTCCAAAATTAATT+GGG + Chr6:10283932-10283951 None:intergenic 30.0%
GAAAACCCGAGTTTAAATAA+TGG - Chr6:10282876-10282895 MsG0680030841.01.T01:intron 30.0%
GAATCCCGATTTAATGTAAT+GGG + Chr6:10284206-10284225 None:intergenic 30.0%
GACCAAAAAGAACAAAAACA+AGG + Chr6:10284921-10284940 None:intergenic 30.0%
GACTGAACTTTGAATCATTT+GGG - Chr6:10282854-10282873 MsG0680030841.01.T01:intron 30.0%
GAGATATTAGGAAAATCAAG+GGG + Chr6:10284350-10284369 None:intergenic 30.0%
GCAAAAAATTTCGGAAGTAA+AGG - Chr6:10285173-10285192 MsG0680030841.01.T01:intron 30.0%
TAAAATCCAACCAAAACAAG+TGG + Chr6:10283421-10283440 None:intergenic 30.0%
TAAAATTGCAACCAAGATAG+AGG - Chr6:10283977-10283996 MsG0680030841.01.T01:intron 30.0%
TACCTAATGCAATCACAAAA+GGG + Chr6:10285576-10285595 None:intergenic 30.0%
TACTAAAATTACGCGTTCAA+TGG + Chr6:10282983-10283002 None:intergenic 30.0%
TACTTTAGGTAGTTGGATAA+TGG - Chr6:10283570-10283589 MsG0680030841.01.T01:CDS 30.0%
TAGTCCTAAAATTAAGAGTC+TGG + Chr6:10284711-10284730 None:intergenic 30.0%
TCCCATTCTCCAAAATTAAT+TGG + Chr6:10283933-10283952 None:intergenic 30.0%
TCTACAATATACTATACAGC+AGG + Chr6:10283488-10283507 None:intergenic 30.0%
TGAAAAACAAAGAACTTGGA+GGG + Chr6:10284452-10284471 None:intergenic 30.0%
TGAAAACTGAATTTGAATCC+TGG - Chr6:10283212-10283231 MsG0680030841.01.T01:intron 30.0%
TGGATGTGGTTAGAAAAAAT+GGG - Chr6:10284080-10284099 MsG0680030841.01.T01:intron 30.0%
TTATAAAACCAGATTCTTCG+TGG - Chr6:10286689-10286708 MsG0680030841.01.T01:five_prime_UTR 30.0%
TTGAATTTCAGCTCAAGTAA+AGG - Chr6:10286118-10286137 MsG0680030841.01.T01:intron 30.0%
TTGATTGTGAATTGAACAGA+GGG - Chr6:10282569-10282588 MsG0680030841.01.T01:three_prime_UTR 30.0%
TTGTTCATATTATGCCTTTC+TGG - Chr6:10285781-10285800 MsG0680030841.01.T01:intron 30.0%
TTTGACATACTTTAGGTAGT+TGG - Chr6:10283563-10283582 MsG0680030841.01.T01:CDS 30.0%
! AACTATCTAGTAGCAGTTTT+TGG - Chr6:10285910-10285929 MsG0680030841.01.T01:intron 30.0%
! AATCGTAAATTCGACGATTT+TGG - Chr6:10284258-10284277 MsG0680030841.01.T01:intron 30.0%
! AGTACTCATTTTACATGACA+AGG - Chr6:10284989-10285008 MsG0680030841.01.T01:intron 30.0%
! ATCGTAAATTCGACGATTTT+GGG - Chr6:10284259-10284278 MsG0680030841.01.T01:intron 30.0%
! ATCTCTCAATTTTCAACATC+TGG - Chr6:10285946-10285965 MsG0680030841.01.T01:intron 30.0%
! ATTTCGCTTTGATTTACTGA+TGG - Chr6:10286254-10286273 MsG0680030841.01.T01:intron 30.0%
! CATATCAAAACCACTTGTTT+TGG - Chr6:10283408-10283427 MsG0680030841.01.T01:CDS 30.0%
! GTACTCATTTTACATGACAA+GGG - Chr6:10284990-10285009 MsG0680030841.01.T01:intron 30.0%
! TCTCTCAATTTTCAACATCT+GGG - Chr6:10285947-10285966 MsG0680030841.01.T01:intron 30.0%
!! ACCCAATTAATTTTGGAGAA+TGG - Chr6:10283928-10283947 MsG0680030841.01.T01:intron 30.0%
!! ATTAATTTTGGAGAATGGGA+AGG - Chr6:10283933-10283952 MsG0680030841.01.T01:intron 30.0%
!! CCCAATTAATTTTGGAGAAT+GGG - Chr6:10283929-10283948 MsG0680030841.01.T01:intron 30.0%
!! GGATTTGTTAATTCGTAACA+TGG - Chr6:10286035-10286054 MsG0680030841.01.T01:intron 30.0%
!! GTTCTTTTTGGTCAATTGAT+TGG - Chr6:10284928-10284947 MsG0680030841.01.T01:intron 30.0%
!! TTAATTTTGGAGAATGGGAA+GGG - Chr6:10283934-10283953 MsG0680030841.01.T01:intron 30.0%
!! TTGAACGCGTAATTTTAGTA+TGG - Chr6:10282983-10283002 MsG0680030841.01.T01:intron 30.0%
!!! ACGATTTTGGGATTTAAATC+AGG - Chr6:10284271-10284290 MsG0680030841.01.T01:intron 30.0%
!!! CAAAACAAGTGGTTTTGATA+TGG + Chr6:10283410-10283429 None:intergenic 30.0%
!!! CTTTATTTTTTCTGCAGACT+GGG - Chr6:10285254-10285273 MsG0680030841.01.T01:intron 30.0%
!!! TTAGGTCCAAAAGGTTTTTT+TGG - Chr6:10286163-10286182 MsG0680030841.01.T01:intron 30.0%
AAAATTTCGGAAGTAAAGGC+TGG - Chr6:10285177-10285196 MsG0680030841.01.T01:intron 35.0%
AAATTCCGAAAGGAGAAGTT+TGG + Chr6:10282300-10282319 None:intergenic 35.0%
AACAAGAACAAGTGGATCAT+TGG - Chr6:10286361-10286380 MsG0680030841.01.T01:CDS 35.0%
AACAGTGTGTGGTTAGAAAA+AGG - Chr6:10284118-10284137 MsG0680030841.01.T01:intron 35.0%
AATTTCAGCTCAAGTAAAGG+TGG - Chr6:10286121-10286140 MsG0680030841.01.T01:intron 35.0%
ACTACATATCCAGACTTCAT+AGG + Chr6:10283081-10283100 None:intergenic 35.0%
ACTATGTATCAGGACTTCAT+AGG + Chr6:10282939-10282958 None:intergenic 35.0%
AGAATGAGTAACGTGTTTGA+AGG - Chr6:10282607-10282626 MsG0680030841.01.T01:CDS 35.0%
AGCTAATGATTGTTTCATCC+AGG + Chr6:10283233-10283252 None:intergenic 35.0%
AGTGTCCCATTTCTTAGAAA+TGG - Chr6:10283045-10283064 MsG0680030841.01.T01:intron 35.0%
ATACATGCCAACAACTGAAA+GGG + Chr6:10283615-10283634 None:intergenic 35.0%
ATGATCTAGAAGAACCAGAA+AGG + Chr6:10285798-10285817 None:intergenic 35.0%
ATTCTATACGTGATCTGGAT+CGG - Chr6:10284222-10284241 MsG0680030841.01.T01:intron 35.0%
ATTTCAGCTCAAGTAAAGGT+GGG - Chr6:10286122-10286141 MsG0680030841.01.T01:intron 35.0%
CAAGCCCATTACATTAAATC+GGG - Chr6:10284199-10284218 MsG0680030841.01.T01:intron 35.0%
CAATGATCGAATTAGGGTTT+CGG - Chr6:10282482-10282501 MsG0680030841.01.T01:three_prime_UTR 35.0%
CATATTTATGAACCCATACG+AGG + Chr6:10286468-10286487 None:intergenic 35.0%
CCAAGCCCATTACATTAAAT+CGG - Chr6:10284198-10284217 MsG0680030841.01.T01:intron 35.0%
CCATCATTTCTTATAAACGG+AGG - Chr6:10282906-10282925 MsG0680030841.01.T01:intron 35.0%
CCTCCGTTTATAAGAAATGA+TGG + Chr6:10282909-10282928 None:intergenic 35.0%
CGACTGAACTTTGAATCATT+TGG - Chr6:10282853-10282872 MsG0680030841.01.T01:intron 35.0%
GAACATCCGGTTACAAAAAA+GGG + Chr6:10283456-10283475 None:intergenic 35.0%
GAAGAATGAACAAGAACAAG+TGG - Chr6:10286353-10286372 MsG0680030841.01.T01:CDS 35.0%
GAAGTCCTGATACATAGTAT+GGG - Chr6:10282941-10282960 MsG0680030841.01.T01:intron 35.0%
GAAGTCTGGATATGTAGTAT+GGG - Chr6:10283083-10283102 MsG0680030841.01.T01:intron 35.0%
GACACTAGTAATCCAAAGTT+CGG + Chr6:10283031-10283050 None:intergenic 35.0%
GACACTGATAATCCAAAGTT+CGG + Chr6:10283276-10283295 None:intergenic 35.0%
GATTAATGACATCAACTGAG+AGG - Chr6:10285615-10285634 MsG0680030841.01.T01:intron 35.0%
GGATGTGGTTAGAAAAAATG+GGG - Chr6:10284081-10284100 MsG0680030841.01.T01:intron 35.0%
GGGAGTCTATTAGAATGATT+TGG + Chr6:10284690-10284709 None:intergenic 35.0%
GTGAAAAACAAAGAACTTGG+AGG + Chr6:10284453-10284472 None:intergenic 35.0%
GTGGATGTGGTTAGAAAAAA+TGG - Chr6:10284079-10284098 MsG0680030841.01.T01:intron 35.0%
GTTACAAAAAAGGGATGGAT+TGG + Chr6:10283447-10283466 None:intergenic 35.0%
GTTGATTGTGAATTGAACAG+AGG - Chr6:10282568-10282587 MsG0680030841.01.T01:three_prime_UTR 35.0%
TCCCATTTCTTAGAAATGGA+GGG - Chr6:10283049-10283068 MsG0680030841.01.T01:intron 35.0%
TCTATTGCATGCTCATAACA+CGG - Chr6:10285742-10285761 MsG0680030841.01.T01:intron 35.0%
TGAACATCCGGTTACAAAAA+AGG + Chr6:10283457-10283476 None:intergenic 35.0%
TGAAGTCCTGATACATAGTA+TGG - Chr6:10282940-10282959 MsG0680030841.01.T01:intron 35.0%
TGAAGTCTGGATATGTAGTA+TGG - Chr6:10283082-10283101 MsG0680030841.01.T01:intron 35.0%
TTTCATGAACGATTCGTAAG+TGG + Chr6:10283197-10283216 None:intergenic 35.0%
! AACCCTCCATTTCTAAGAAA+TGG + Chr6:10283054-10283073 None:intergenic 35.0%
! AACCTTTTGGACCTAAAACA+TGG + Chr6:10286159-10286178 None:intergenic 35.0%
! AATAGAAACACCTAGCTCTT+CGG + Chr6:10285693-10285712 None:intergenic 35.0%
! ACCCTCCATTTCTAAGAAAT+GGG + Chr6:10283053-10283072 None:intergenic 35.0%
! ACTCCCAGACTCTTAATTTT+AGG - Chr6:10284704-10284723 MsG0680030841.01.T01:intron 35.0%
! ATCCCTTTTGTGATTGCATT+AGG - Chr6:10285571-10285590 MsG0680030841.01.T01:intron 35.0%
! GCAAGTTAACTTGACAATGT+TGG - Chr6:10286573-10286592 MsG0680030841.01.T01:intron 35.0%
! GGATCGTACCCAATTAATTT+TGG - Chr6:10283921-10283940 MsG0680030841.01.T01:intron 35.0%
! TAGAACAGTGGTATTTTTCG+AGG - Chr6:10284050-10284069 MsG0680030841.01.T01:intron 35.0%
! TTTGCTGTGAAAATACTACG+AGG - Chr6:10285535-10285554 MsG0680030841.01.T01:intron 35.0%
!! CGATTTAATGTAATGGGCTT+GGG + Chr6:10284200-10284219 None:intergenic 35.0%
!! CTTTTTGGTCAATTGATTGG+TGG - Chr6:10284931-10284950 MsG0680030841.01.T01:intron 35.0%
!! TAATTTTGGAGAATGGGAAG+GGG - Chr6:10283935-10283954 MsG0680030841.01.T01:intron 35.0%
!! TAGGAAAATCAAGGGGTATT+AGG + Chr6:10284343-10284362 None:intergenic 35.0%
!! TGGATGTGATTTTGATAACC+AGG + Chr6:10283660-10283679 None:intergenic 35.0%
!! TTTTGGAGAAAAACAGTGTG+TGG - Chr6:10284107-10284126 MsG0680030841.01.T01:intron 35.0%
!!! ACAATGTTGGCTTCTTTTAC+GGG - Chr6:10286586-10286605 MsG0680030841.01.T01:intron 35.0%
!!! ATCCATCCCTTTTTTGTAAC+CGG - Chr6:10283447-10283466 MsG0680030841.01.T01:intron 35.0%
!!! GACAATGTTGGCTTCTTTTA+CGG - Chr6:10286585-10286604 MsG0680030841.01.T01:intron 35.0%
!!! GCCCTTGTTTTTGTTCTTTT+TGG - Chr6:10284916-10284935 MsG0680030841.01.T01:intron 35.0%
!!! GCTTTATTTTTTCTGCAGAC+TGG - Chr6:10285253-10285272 MsG0680030841.01.T01:intron 35.0%
!!! GTATTTTTCGAGGAAAAGAG+TGG - Chr6:10284060-10284079 MsG0680030841.01.T01:intron 35.0%
!!! GTGTCATTTACACGTGTTTT+AGG - Chr6:10284167-10284186 MsG0680030841.01.T01:intron 35.0%
!!! TCAAAACCACTTGTTTTGGT+TGG - Chr6:10283412-10283431 MsG0680030841.01.T01:CDS 35.0%
AAACTTGAATCCTTCTGCAC+GGG - Chr6:10285437-10285456 MsG0680030841.01.T01:intron 40.0%
AAATTCTACAACCAGTGACC+GGG - Chr6:10283152-10283171 MsG0680030841.01.T01:intron 40.0%
AACATGGCATAGAGATTCCA+AGG + Chr6:10284800-10284819 None:intergenic 40.0%
AAGATCGCAACCAAGATTGA+AGG - Chr6:10283900-10283919 MsG0680030841.01.T01:intron 40.0%
AAGGAGTGATTGAACTCAAG+TGG - Chr6:10282820-10282839 MsG0680030841.01.T01:intron 40.0%
AAGGCCCAGAAAAGAGAATA+TGG - Chr6:10283320-10283339 MsG0680030841.01.T01:CDS 40.0%
AAGTTTGCAGCCAAATGTCA+AGG - Chr6:10285335-10285354 MsG0680030841.01.T01:intron 40.0%
AATTGATGAAGCAGAGGCTT+TGG - Chr6:10285200-10285219 MsG0680030841.01.T01:intron 40.0%
ACAAAGAACTTGGAGGGTTT+CGG + Chr6:10284446-10284465 None:intergenic 40.0%
AGATAGCAGGAGAACAATGT+TGG - Chr6:10285664-10285683 MsG0680030841.01.T01:intron 40.0%
AGATCTTGCCTAAGATCGAA+AGG - Chr6:10283855-10283874 MsG0680030841.01.T01:CDS 40.0%
AGGAGCTACACATCAATACT+AGG + Chr6:10283640-10283659 None:intergenic 40.0%
AGTTTGCAGCCAAATGTCAA+GGG - Chr6:10285336-10285355 MsG0680030841.01.T01:intron 40.0%
ATCCGGTTACAAAAAAGGGA+TGG + Chr6:10283452-10283471 None:intergenic 40.0%
ATCTTGCCTAAGATCGAAAG+GGG - Chr6:10283857-10283876 MsG0680030841.01.T01:CDS 40.0%
ATTAGGACCCTTTCAGTTGT+TGG - Chr6:10283605-10283624 MsG0680030841.01.T01:CDS 40.0%
CAACACCAAACTTCTCCTTT+CGG - Chr6:10282292-10282311 MsG0680030841.01.T01:intron 40.0%
CAACATAACCACGAAGAATC+TGG + Chr6:10286700-10286719 None:intergenic 40.0%
CAAGGTCTGACACAATAGTA+TGG + Chr6:10284782-10284801 None:intergenic 40.0%
CATACTATTGTGTCAGACCT+TGG - Chr6:10284780-10284799 MsG0680030841.01.T01:intron 40.0%
CATGGTGTGGATGATAACAT+AGG - Chr6:10286298-10286317 MsG0680030841.01.T01:intron 40.0%
CCTGATGCTATAAAAACACC+TGG - Chr6:10283794-10283813 MsG0680030841.01.T01:intron 40.0%
GAAACTTGAATCCTTCTGCA+CGG - Chr6:10285436-10285455 MsG0680030841.01.T01:intron 40.0%
GAAATTCTACAACCAGTGAC+CGG - Chr6:10283151-10283170 MsG0680030841.01.T01:intron 40.0%
GAGGTGATGTCTTATAGTCT+TGG - Chr6:10284663-10284682 MsG0680030841.01.T01:intron 40.0%
GATACATGCCAACAACTGAA+AGG + Chr6:10283616-10283635 None:intergenic 40.0%
GATCTTGCCTAAGATCGAAA+GGG - Chr6:10283856-10283875 MsG0680030841.01.T01:CDS 40.0%
GATTCGAAAAATGGACCTTG+AGG - Chr6:10285308-10285327 MsG0680030841.01.T01:intron 40.0%
GTCCCATTTCTTAGAAATGG+AGG - Chr6:10283048-10283067 MsG0680030841.01.T01:intron 40.0%
GTGAACGAGTTAAAGATAGC+AGG - Chr6:10285651-10285670 MsG0680030841.01.T01:intron 40.0%
GTGTACTTCTTGCTAAGTTG+CGG - Chr6:10285358-10285377 MsG0680030841.01.T01:intron 40.0%
GTTGAGTGAAGCCACAAAAA+TGG + Chr6:10286005-10286024 None:intergenic 40.0%
TAGGCCAGAGGATAAAAGTT+CGG + Chr6:10284324-10284343 None:intergenic 40.0%
TAGTAATCCAAAGTTCGGTC+AGG + Chr6:10283026-10283045 None:intergenic 40.0%
TCGTACCCATACTATGTATC+AGG + Chr6:10282949-10282968 None:intergenic 40.0%
TGATAATCCAAAGTTCGGTC+AGG + Chr6:10283271-10283290 None:intergenic 40.0%
TGTACTTCTTGCTAAGTTGC+GGG - Chr6:10285359-10285378 MsG0680030841.01.T01:intron 40.0%
TTGCAATGATAGCAACAACC+AGG + Chr6:10286402-10286421 None:intergenic 40.0%
! AGAAGTACACCCTTGACATT+TGG + Chr6:10285348-10285367 None:intergenic 40.0%
! ATTGAGCGGGGAATGATTTT+TGG + Chr6:10284886-10284905 None:intergenic 40.0%
! CTTCACTCAACTCAAGCTTT+TGG - Chr6:10286014-10286033 MsG0680030841.01.T01:intron 40.0%
! TTGAGCGGGGAATGATTTTT+GGG + Chr6:10284885-10284904 None:intergenic 40.0%
!! AATTTTGGAGAATGGGAAGG+GGG - Chr6:10283936-10283955 MsG0680030841.01.T01:intron 40.0%
!! CCAGGTGTTTTTATAGCATC+AGG + Chr6:10283797-10283816 None:intergenic 40.0%
!! CCGATTTAATGTAATGGGCT+TGG + Chr6:10284201-10284220 None:intergenic 40.0%
!! GTCCATGTTTTAGGTCCAAA+AGG - Chr6:10286154-10286173 MsG0680030841.01.T01:intron 40.0%
!! TAGTATTGATGTGTAGCTCC+TGG - Chr6:10283639-10283658 MsG0680030841.01.T01:CDS 40.0%
AAAGAGAGAGATCGTACGTG+CGG + Chr6:10282393-10282412 None:intergenic 45.0%
AATCATTCCCCGCTCAATCA+TGG - Chr6:10284888-10284907 MsG0680030841.01.T01:intron 45.0%
AATTGACCGGAGAATGGTTG+CGG + Chr6:10282323-10282342 None:intergenic 45.0%
ACTCATTAACCACTTGAGCC+CGG + Chr6:10283173-10283192 None:intergenic 45.0%
ACTGAGAGGTTGAACAAGAC+TGG - Chr6:10285629-10285648 MsG0680030841.01.T01:intron 45.0%
ACTGCAGCTACTGCTCTTAA+TGG - Chr6:10282679-10282698 MsG0680030841.01.T01:CDS 45.0%
AGAGACTGATCACCCAACAT+CGG + Chr6:10284550-10284569 None:intergenic 45.0%
AGGCATGGCAGATACTATGA+CGG - Chr6:10285476-10285495 MsG0680030841.01.T01:intron 45.0%
AGGGTTCATAGGGTTACTCA+CGG - Chr6:10283356-10283375 MsG0680030841.01.T01:CDS 45.0%
ATGCCTTTAAGCGGAAGCAA+AGG - Chr6:10283820-10283839 MsG0680030841.01.T01:intron 45.0%
ATGGTTGCGGAAATTCCGAA+AGG + Chr6:10282310-10282329 None:intergenic 45.0%
ATGTTGGAAACCGAAGAGCT+AGG - Chr6:10285680-10285699 MsG0680030841.01.T01:intron 45.0%
ATTGGCATGTGTCTTATGCC+GGG - Chr6:10286614-10286633 MsG0680030841.01.T01:intron 45.0%
CAACCTTTGCTTCCGCTTAA+AGG + Chr6:10283826-10283845 None:intergenic 45.0%
CAGGTTCTACTGTGAACATC+CGG + Chr6:10283469-10283488 None:intergenic 45.0%
CATAGCCAATTGCCGATGTT+GGG - Chr6:10284535-10284554 MsG0680030841.01.T01:intron 45.0%
CATTGGCATGTGTCTTATGC+CGG - Chr6:10286613-10286632 MsG0680030841.01.T01:intron 45.0%
CCTAAAACATGGACCGACAT+CGG + Chr6:10286148-10286167 None:intergenic 45.0%
CTTATCTCCTGACCGAACTT+TGG - Chr6:10283261-10283280 MsG0680030841.01.T01:intron 45.0%
GAATTTCCGCAACCATTCTC+CGG - Chr6:10282314-10282333 MsG0680030841.01.T01:three_prime_UTR 45.0%
GGGTTAAGACCTATGAAGTC+TGG - Chr6:10282927-10282946 MsG0680030841.01.T01:intron 45.0%
GGTGTAAGATCCCTCTATCT+TGG + Chr6:10283991-10284010 None:intergenic 45.0%
GTCGCTGTGAATGCAAATCT+TGG + Chr6:10285718-10285737 None:intergenic 45.0%
TAATCCAAAGTTCGGTCAGG+AGG + Chr6:10283023-10283042 None:intergenic 45.0%
TCATAGGGTTACTCACGGAT+AGG - Chr6:10283361-10283380 MsG0680030841.01.T01:CDS 45.0%
TCGGGATTCTATACGTGATC+TGG - Chr6:10284217-10284236 MsG0680030841.01.T01:intron 45.0%
TCTTGCCTAAGATCGAAAGG+GGG - Chr6:10283858-10283877 MsG0680030841.01.T01:CDS 45.0%
TGAGTTGTTGGAATCAGGCA+TGG - Chr6:10285461-10285480 MsG0680030841.01.T01:intron 45.0%
TGGGTACGATCCTTCAATCT+TGG + Chr6:10283913-10283932 None:intergenic 45.0%
TTCGAGGAAAAGAGTGGATG+TGG - Chr6:10284066-10284085 MsG0680030841.01.T01:intron 45.0%
! ACGACCGAACTTTTATCCTC+TGG - Chr6:10284317-10284336 MsG0680030841.01.T01:intron 45.0%
! CTTCTTTTACGGGACACCAT+TGG - Chr6:10286596-10286615 MsG0680030841.01.T01:intron 45.0%
! GTGTCCCATTCTCTAGAAAC+CGG - Chr6:10283291-10283310 MsG0680030841.01.T01:CDS 45.0%
! TGAGCGGGGAATGATTTTTG+GGG + Chr6:10284884-10284903 None:intergenic 45.0%
!! AATGATTTTTGGGGGGGAAG+GGG + Chr6:10284875-10284894 None:intergenic 45.0%
!! CGAAAGGAGAAGTTTGGTGT+TGG + Chr6:10282294-10282313 None:intergenic 45.0%
!! GAATGATTTTTGGGGGGGAA+GGG + Chr6:10284876-10284895 None:intergenic 45.0%
!! TTAAAATTGAATATAAAATA+GGG - Chr6:10283129-10283148 MsG0680030841.01.T01:intron 5.0%
!!! TTTAAAATTGAATATAAAAT+AGG - Chr6:10283128-10283147 MsG0680030841.01.T01:intron 5.0%
AACAACTCATCCCGTGCAGA+AGG + Chr6:10285450-10285469 None:intergenic 50.0%
AAGCGGAAGCAAAGGTTGTC+AGG - Chr6:10283828-10283847 MsG0680030841.01.T01:intron 50.0%
AAGGCCTACTTGTCCTCGTA+TGG - Chr6:10286452-10286471 MsG0680030841.01.T01:intron 50.0%
AAGTAAAGGTGGGCCGATGT+CGG - Chr6:10286132-10286151 MsG0680030841.01.T01:intron 50.0%
ACCTGGCGAATGCCTTTAAG+CGG - Chr6:10283811-10283830 MsG0680030841.01.T01:intron 50.0%
AGAAACGGCGGGAAATTGAC+CGG + Chr6:10282336-10282355 None:intergenic 50.0%
AGGCCTACTTGTCCTCGTAT+GGG - Chr6:10286453-10286472 MsG0680030841.01.T01:intron 50.0%
CACACCATGAAGCTGCATGT+GGG + Chr6:10286287-10286306 None:intergenic 50.0%
CCAACATCGGCAATTGGCTA+TGG + Chr6:10284537-10284556 None:intergenic 50.0%
CCATAGCCAATTGCCGATGT+TGG - Chr6:10284534-10284553 MsG0680030841.01.T01:intron 50.0%
CGGCATAAGACACATGCCAA+TGG + Chr6:10286615-10286634 None:intergenic 50.0%
CGGGATGAGTTGTTGGAATC+AGG - Chr6:10285456-10285475 MsG0680030841.01.T01:intron 50.0%
CTTTCCTCCTGACCGAACTT+TGG - Chr6:10283016-10283035 MsG0680030841.01.T01:intron 50.0%
GAACCCATACGAGGACAAGT+AGG + Chr6:10286459-10286478 None:intergenic 50.0%
GACGGCGGAGGTTTAAGAAA+CGG + Chr6:10282351-10282370 None:intergenic 50.0%
GATCACCCAACATCGGCAAT+TGG + Chr6:10284543-10284562 None:intergenic 50.0%
GCAGCTACTGCTCTTAATGG+AGG - Chr6:10282682-10282701 MsG0680030841.01.T01:CDS 50.0%
GCTGCAAACTTCTTGCCTCA+AGG + Chr6:10285326-10285345 None:intergenic 50.0%
GGCTGGAATTGATGAAGCAG+AGG - Chr6:10285194-10285213 MsG0680030841.01.T01:intron 50.0%
TAAGCCCACATGCAGCTTCA+TGG - Chr6:10286280-10286299 MsG0680030841.01.T01:intron 50.0%
TGCTACCCCCTTTCGATCTT+AGG + Chr6:10283866-10283885 None:intergenic 50.0%
TTCTGCACGGGATGAGTTGT+TGG - Chr6:10285449-10285468 MsG0680030841.01.T01:intron 50.0%
! ACCCTCCGGTTTCTAGAGAA+TGG + Chr6:10283299-10283318 None:intergenic 50.0%
! CCCATTCTCTAGAAACCGGA+GGG - Chr6:10283295-10283314 MsG0680030841.01.T01:CDS 50.0%
! CCCTCCGGTTTCTAGAGAAT+GGG + Chr6:10283298-10283317 None:intergenic 50.0%
! CCGATGTCGGTCCATGTTTT+AGG - Chr6:10286145-10286164 MsG0680030841.01.T01:intron 50.0%
! CTCTAGAAACCGGAGGGTTA+AGG - Chr6:10283301-10283320 MsG0680030841.01.T01:CDS 50.0%
! TCCCATTCTCTAGAAACCGG+AGG - Chr6:10283294-10283313 MsG0680030841.01.T01:CDS 50.0%
! TTTTCTGGGCCTTAACCCTC+CGG + Chr6:10283313-10283332 None:intergenic 50.0%
!! AGCGGGGAATGATTTTTGGG+GGG + Chr6:10284882-10284901 None:intergenic 50.0%
!! ATCAAGGGGTATTAGGCCAG+AGG + Chr6:10284336-10284355 None:intergenic 50.0%
!! ATGATTTTTGGGGGGGAAGG+GGG + Chr6:10284874-10284893 None:intergenic 50.0%
!! ATGTAATGGGCTTGGGCGTT+TGG + Chr6:10284193-10284212 None:intergenic 50.0%
!! GAGCGGGGAATGATTTTTGG+GGG + Chr6:10284883-10284902 None:intergenic 50.0%
!! GGAATGATTTTTGGGGGGGA+AGG + Chr6:10284877-10284896 None:intergenic 50.0%
CCACACCATGAAGCTGCATG+TGG + Chr6:10286288-10286307 None:intergenic 55.0%
CCACATGCAGCTTCATGGTG+TGG - Chr6:10286285-10286304 MsG0680030841.01.T01:intron 55.0%
GCGGAGGTTTAAGAAACGGC+GGG + Chr6:10282347-10282366 None:intergenic 55.0%
GCGGGAAATTGACCGGAGAA+TGG + Chr6:10282329-10282348 None:intergenic 55.0%
GGCGGAGGTTTAAGAAACGG+CGG + Chr6:10282348-10282367 None:intergenic 55.0%
TGGCTGCATTGTGCTTGTCC+TGG - Chr6:10286381-10286400 MsG0680030841.01.T01:CDS 55.0%
! GCATCGACCATGATTGAGCG+GGG + Chr6:10284898-10284917 None:intergenic 55.0%
!! GCGGGGAATGATTTTTGGGG+GGG + Chr6:10284881-10284900 None:intergenic 55.0%
!! GGCATCGACCATGATTGAGC+GGG + Chr6:10284899-10284918 None:intergenic 55.0%
!! GGGCATCGACCATGATTGAG+CGG + Chr6:10284900-10284919 None:intergenic 55.0%
!! TCCGCTTAAAGGCATTCGCC+AGG + Chr6:10283815-10283834 None:intergenic 55.0%
!! TGATTTTTGGGGGGGAAGGG+GGG + Chr6:10284873-10284892 None:intergenic 55.0%
AACCACTTGAGCCCGGTCAC+TGG + Chr6:10283166-10283185 None:intergenic 60.0%
AACCAGTGACCGGGCTCAAG+TGG - Chr6:10283161-10283180 MsG0680030841.01.T01:intron 60.0%
AGATCGTACGTGCGGTGGTC+GGG + Chr6:10282385-10282404 None:intergenic 60.0%
GAGAGAGATCGTACGTGCGG+TGG + Chr6:10282390-10282409 None:intergenic 60.0%
GAGATCGTACGTGCGGTGGT+CGG + Chr6:10282386-10282405 None:intergenic 60.0%
ACGTGCGGTGGTCGGGAAGG+CGG + Chr6:10282378-10282397 None:intergenic 70.0%
CGTACGTGCGGTGGTCGGGA+AGG + Chr6:10282381-10282400 None:intergenic 70.0%
GGTCGGGAAGGCGGAGGTGA+CGG + Chr6:10282369-10282388 None:intergenic 70.0%
TGCGGTGGTCGGGAAGGCGG+AGG + Chr6:10282375-10282394 None:intergenic 75.0%
! CGGGAAGGCGGAGGTGACGG+CGG + Chr6:10282366-10282385 None:intergenic 75.0%
! GAAGGCGGAGGTGACGGCGG+AGG + Chr6:10282363-10282382 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 10282249 10286801 10282249 ID=MsG0680030841.01;Name=MsG0680030841.01
Chr6 mRNA 10282249 10286801 10282249 ID=MsG0680030841.01.T01;Parent=MsG0680030841.01;Name=MsG0680030841.01.T01;_AED=0.42;_eAED=0.42;_QI=169|1|1|1|0.5|0.42|7|323|221
Chr6 exon 10282249 10282275 10282249 ID=MsG0680030841.01.T01:exon:7960;Parent=MsG0680030841.01.T01
Chr6 exon 10282307 10282755 10282307 ID=MsG0680030841.01.T01:exon:7959;Parent=MsG0680030841.01.T01
Chr6 five_prime_UTR 10286655 10286801 10286655 ID=MsG0680030841.01.T01:five_prime_utr;Parent=MsG0680030841.01.T01
Chr6 five_prime_UTR 10286441 10286462 10286441 ID=MsG0680030841.01.T01:five_prime_utr;Parent=MsG0680030841.01.T01
Chr6 CDS 10286347 10286440 10286347 ID=MsG0680030841.01.T01:cds;Parent=MsG0680030841.01.T01
Chr6 CDS 10283829 10283887 10283829 ID=MsG0680030841.01.T01:cds;Parent=MsG0680030841.01.T01
Chr6 CDS 10283553 10283741 10283553 ID=MsG0680030841.01.T01:cds;Parent=MsG0680030841.01.T01
Chr6 CDS 10283287 10283457 10283287 ID=MsG0680030841.01.T01:cds;Parent=MsG0680030841.01.T01
Chr6 CDS 10282603 10282755 10282603 ID=MsG0680030841.01.T01:cds;Parent=MsG0680030841.01.T01
Chr6 three_prime_UTR 10282307 10282602 10282307 ID=MsG0680030841.01.T01:three_prime_utr;Parent=MsG0680030841.01.T01
Chr6 three_prime_UTR 10282249 10282275 10282249 ID=MsG0680030841.01.T01:three_prime_utr;Parent=MsG0680030841.01.T01
Chr6 mRNA 10282269 10286801 10282269 ID=MsG0680030841.01.T02;Parent=MsG0680030841.01;Name=MsG0680030841.01.T02;_AED=0.42;_eAED=0.42;_QI=169|1|1|1|0.6|0.66|6|334|221
Chr6 exon 10282269 10282755 10282269 ID=MsG0680030841.01.T02:exon:7961;Parent=MsG0680030841.01.T02
Chr6 five_prime_UTR 10286655 10286801 10286655 ID=MsG0680030841.01.T02:five_prime_utr;Parent=MsG0680030841.01.T02
Chr6 five_prime_UTR 10286441 10286462 10286441 ID=MsG0680030841.01.T02:five_prime_utr;Parent=MsG0680030841.01.T02
Chr6 CDS 10286347 10286440 10286347 ID=MsG0680030841.01.T02:cds;Parent=MsG0680030841.01.T02
Chr6 CDS 10283829 10283887 10283829 ID=MsG0680030841.01.T02:cds;Parent=MsG0680030841.01.T02
Chr6 CDS 10283553 10283741 10283553 ID=MsG0680030841.01.T02:cds;Parent=MsG0680030841.01.T02
Chr6 CDS 10283287 10283457 10283287 ID=MsG0680030841.01.T02:cds;Parent=MsG0680030841.01.T02
Chr6 CDS 10282603 10282755 10282603 ID=MsG0680030841.01.T02:cds;Parent=MsG0680030841.01.T02
Chr6 three_prime_UTR 10282269 10282602 10282269 ID=MsG0680030841.01.T02:three_prime_utr;Parent=MsG0680030841.01.T02
Gene Sequence

>MsG0680030841.01.T01

ATGAGTAACGTGTTTGAAGGATACGAACGTCAGTACTGTGAGCTTTCTGCTAATTTGTCAAAAAAATGCACTGCAGCTACTGCTCTTAATGGAGAGCAAAAGAAGCAAAAAATTTCGGAAGTAAAGGCTGGAATTGATGAAGCAGAGGCTTTGATTCGAAAAATGGACCTTGAGGCAAGAAGTTTGCAGCCAAATGTCAAGGGTGTACTTCTTGCTAAGTTGCGGGAGTATAAATCAGATCTAAACAACCTTAAAAGTGAAGTTAAGAAAATTGTATCTGGAAACTTGAATCCTTCTGCACGGGATGAGTTGTTGGAATCAGGCATGGCAGATACTATGACGGTATCAGCTGATCAGAGAACAAGATTAATGACATCAACTGAGAGGTTGAACAAGACTGGTGAACGAGTTAAAGATAGCAGGAGAACAATGTTGGAAACCGAAGAGCTAGGTGTTTCTATTCTCCAAGATTTGCATTCACAGCGACAATCTCTATTGCATGCTCATAACACGCTTCATGGTGTGGATGATAACATAGGCAAGAGCAAGAAAATTATGACAAACATGTCTAGAAGAATGAACAAGAACAAGTGGATCATTGGCTGCATTGTGCTTGTCCTGGTTGTTGCTATCATTGCAATCCTATACTTCAAACTTGTTAAATAG

>MsG0680030841.01.T02

ATGAGTAACGTGTTTGAAGGATACGAACGTCAGTACTGTGAGCTTTCTGCTAATTTGTCAAAAAAATGCACTGCAGCTACTGCTCTTAATGGAGAGCAAAAGAAGCAAAAAATTTCGGAAGTAAAGGCTGGAATTGATGAAGCAGAGGCTTTGATTCGAAAAATGGACCTTGAGGCAAGAAGTTTGCAGCCAAATGTCAAGGGTGTACTTCTTGCTAAGTTGCGGGAGTATAAATCAGATCTAAACAACCTTAAAAGTGAAGTTAAGAAAATTGTATCTGGAAACTTGAATCCTTCTGCACGGGATGAGTTGTTGGAATCAGGCATGGCAGATACTATGACGGTATCAGCTGATCAGAGAACAAGATTAATGACATCAACTGAGAGGTTGAACAAGACTGGTGAACGAGTTAAAGATAGCAGGAGAACAATGTTGGAAACCGAAGAGCTAGGTGTTTCTATTCTCCAAGATTTGCATTCACAGCGACAATCTCTATTGCATGCTCATAACACGCTTCATGGTGTGGATGATAACATAGGCAAGAGCAAGAAAATTATGACAAACATGTCTAGAAGAATGAACAAGAACAAGTGGATCATTGGCTGCATTGTGCTTGTCCTGGTTGTTGCTATCATTGCAATCCTATACTTCAAACTTGTTAAATAG

Protein sequence

>MsG0680030841.01.T01

MSNVFEGYERQYCELSANLSKKCTAATALNGEQKKQKISEVKAGIDEAEALIRKMDLEARSLQPNVKGVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTMTVSADQRTRLMTSTERLNKTGERVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIGKSKKIMTNMSRRMNKNKWIIGCIVLVLVVAIIAILYFKLVK*

>MsG0680030841.01.T02

MSNVFEGYERQYCELSANLSKKCTAATALNGEQKKQKISEVKAGIDEAEALIRKMDLEARSLQPNVKGVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTMTVSADQRTRLMTSTERLNKTGERVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIGKSKKIMTNMSRRMNKNKWIIGCIVLVLVVAIIAILYFKLVK*