AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029801.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029801.01.T01 MTR_5g092870 99.052 211 2 0 1 211 1 211 6.62e-153 429
MsG0580029801.01.T01 MTR_3g052210 77.251 211 44 2 1 211 1 207 8.86e-116 334
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029801.01.T01 AT1G28490 67.925 212 64 3 1 211 1 209 1.51e-99 293
MsG0580029801.01.T01 AT1G28490 68.153 157 47 2 55 211 11 164 2.05e-69 214
MsG0580029801.01.T01 AT1G28490 68.153 157 47 2 55 211 17 170 6.55e-69 213

Find 71 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTTGACAACGTAAAA+TGG 0.199042 5:+102139829 None:intergenic
TCCAAGTGAGTTTCCGCTTT+TGG 0.200310 5:-102135380 MsG0580029801.01.T01:CDS
TCTTGGTTGTAAATGCAAAA+AGG 0.254892 5:-102135127 MsG0580029801.01.T01:CDS
TACCTGGGTGCGAGCATTGC+TGG 0.310121 5:+102138271 None:intergenic
TGAAGAATACCAAGATAAAA+AGG 0.311255 5:+102135168 None:intergenic
GGAAAAGATTCTAGATGAAC+TGG 0.327556 5:-102135442 MsG0580029801.01.T01:CDS
TGATAGAAAGGTGGATGAAT+TGG 0.340172 5:-102138375 MsG0580029801.01.T01:intron
CAGAATCTGGAATTGGGAAT+TGG 0.351772 5:+102139879 None:intergenic
GACGTACTTTGATGAGAATC+TGG 0.370989 5:+102137957 None:intergenic
CATTATCCCCAGAGGCATAT+TGG 0.373000 5:+102137925 None:intergenic
TAGCATCTAGAGATCCTTCT+TGG 0.380240 5:-102138337 MsG0580029801.01.T01:CDS
AAACGAAATTGATGAAGAAA+TGG 0.402315 5:+102139912 None:intergenic
TGGGAAAACACTTCTGATAC+TGG 0.403074 5:-102139271 MsG0580029801.01.T01:CDS
GATGATGATATGTGGTTTGC+TGG 0.410145 5:-102135204 MsG0580029801.01.T01:CDS
CATTGCTGGTCCACCTCCTC+CGG 0.425273 5:+102138285 None:intergenic
CAATACATGAAGAGCTCCTT+GGG 0.426328 5:-102135655 MsG0580029801.01.T01:CDS
AAGTCTAACCAATATGCCTC+TGG 0.429106 5:-102137933 MsG0580029801.01.T01:CDS
ATGAAGAAGGCCAGTGCAAA+GGG 0.430950 5:-102135233 MsG0580029801.01.T01:CDS
CATCATCTGCCCCTTTGCAC+TGG 0.444110 5:+102135223 None:intergenic
AGTTTAAGTGTACAGAGAAT+CGG 0.466460 5:-102135692 MsG0580029801.01.T01:CDS
CAGCAAGAACTTCCTTTGAA+AGG 0.473857 5:+102139236 None:intergenic
TTGTGGAAGTATTGAGTGGC+AGG 0.474925 5:-102139212 MsG0580029801.01.T01:intron
AAGGAAGTTCTTGCTGCTTG+TGG 0.475725 5:-102139229 MsG0580029801.01.T01:CDS
CTAGTATAAGTGGGATGCAC+AGG 0.476219 5:-102137995 MsG0580029801.01.T01:CDS
ACAATACATGAAGAGCTCCT+TGG 0.478003 5:-102135656 MsG0580029801.01.T01:CDS
CTAGTCGTTTCTGAATGTCT+TGG 0.480262 5:-102135144 MsG0580029801.01.T01:CDS
ACAACTCATGCTAGTATAAG+TGG 0.493222 5:-102138005 MsG0580029801.01.T01:CDS
ATTAAGAGAACAGTGGAAGC+TGG 0.496755 5:-102138044 MsG0580029801.01.T01:CDS
TACTGCTATTGATAGGCAGC+AGG 0.501024 5:-102135735 MsG0580029801.01.T01:intron
TCATAGAATCAGAATCAGAT+AGG 0.505091 5:-102137896 MsG0580029801.01.T01:CDS
GCTGGTAATAAAGATATGAA+TGG 0.508291 5:-102135333 MsG0580029801.01.T01:CDS
ATGAAGTGGAGATTGAAAAC+CGG 0.508658 5:-102138304 MsG0580029801.01.T01:CDS
TCCAAAAGCGGAAACTCACT+TGG 0.514277 5:+102135379 None:intergenic
GAGAACAGTGGAAGCTGGAA+AGG 0.519334 5:-102138039 MsG0580029801.01.T01:CDS
TCTGGAATTGGGAATTGGAA+TGG 0.521631 5:+102139884 None:intergenic
CGAAATTGATGAAGAAATGG+AGG 0.523405 5:+102139915 None:intergenic
ACATGAAGAGCTCCTTGGGC+AGG 0.525155 5:-102135651 MsG0580029801.01.T01:intron
AGTCTAACCAATATGCCTCT+GGG 0.528315 5:-102137932 MsG0580029801.01.T01:CDS
AGATTGAAAACCGGAGGAGG+TGG 0.529877 5:-102138295 MsG0580029801.01.T01:CDS
TTGGACAAAATCTAGACGAT+TGG 0.532143 5:+102135398 None:intergenic
GTACAGAGAATCGGAGGTGT+TGG 0.534643 5:-102135683 MsG0580029801.01.T01:CDS
TCTAGAGATCCTTCTTGGTA+TGG 0.537717 5:-102138332 MsG0580029801.01.T01:CDS
AGATGAACTGGGAAATGAGA+TGG 0.539156 5:-102135430 MsG0580029801.01.T01:CDS
CGAGCATTTGAACCTTTCAA+AGG 0.540054 5:-102139248 MsG0580029801.01.T01:CDS
TATTGATAGGCAGCAGGACG+AGG 0.542113 5:-102135729 MsG0580029801.01.T01:intron
AGTGGCAATGGTGATGAAGA+AGG 0.556318 5:-102135246 MsG0580029801.01.T01:CDS
ATTTCAGAAAAGAGTGGCAA+TGG 0.560428 5:-102135258 MsG0580029801.01.T01:CDS
AGAACAGTGGAAGCTGGAAA+GGG 0.568137 5:-102138038 MsG0580029801.01.T01:CDS
GATGAAGAAGGCCAGTGCAA+AGG 0.571528 5:-102135234 MsG0580029801.01.T01:CDS
TGGAGATTGAAAACCGGAGG+AGG 0.573238 5:-102138298 MsG0580029801.01.T01:CDS
TTGGTATGGCATTGATGAAG+TGG 0.577534 5:-102138318 MsG0580029801.01.T01:CDS
TAAAATGGATCTTGAGCTGA+GGG 0.587285 5:+102139844 None:intergenic
CAAGACATTCAGAAACGACT+AGG 0.594084 5:+102135145 None:intergenic
CTGCTTGTGGAAGTATTGAG+TGG 0.603126 5:-102139216 MsG0580029801.01.T01:CDS
TCATCAATGCCATACCAAGA+AGG 0.605775 5:+102138323 None:intergenic
CAGAGAGCAAAATCCAAAAG+CGG 0.608979 5:+102135367 None:intergenic
GGATGCACAGGGAATTAATG+AGG 0.609838 5:-102137983 MsG0580029801.01.T01:CDS
GACCAGCAATGCTCGCACCC+AGG 0.617619 5:-102138273 MsG0580029801.01.T01:intron
CAACTCATGCTAGTATAAGT+GGG 0.625213 5:-102138004 MsG0580029801.01.T01:CDS
ATATATCAGCTACCTGCCCA+AGG 0.637394 5:+102135639 None:intergenic
TTTATGATTTCAGAAAAGAG+TGG 0.640500 5:-102135264 MsG0580029801.01.T01:CDS
TAGTATAAGTGGGATGCACA+GGG 0.644916 5:-102137994 MsG0580029801.01.T01:CDS
GTAAAATGGATCTTGAGCTG+AGG 0.647163 5:+102139843 None:intergenic
GTCTAACCAATATGCCTCTG+GGG 0.647453 5:-102137931 MsG0580029801.01.T01:CDS
AAGTGGAGATTGAAAACCGG+AGG 0.652309 5:-102138301 MsG0580029801.01.T01:CDS
GAAAAGATTCTAGATGAACT+GGG 0.658756 5:-102135441 MsG0580029801.01.T01:CDS
GGGCAGATGATGATGATATG+TGG 0.673837 5:-102135212 MsG0580029801.01.T01:CDS
TTAAGTGTACAGAGAATCGG+AGG 0.688868 5:-102135689 MsG0580029801.01.T01:CDS
GCACACAATTAAGAGAACAG+TGG 0.717353 5:-102138051 MsG0580029801.01.T01:CDS
TGAAGAAGGCCAGTGCAAAG+GGG 0.733851 5:-102135232 MsG0580029801.01.T01:CDS
GAAATCATCATTATCCCCAG+AGG 0.750638 5:+102137917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTGTAAATATCATTAT+TGG - Chr5:102136135-102136154 MsG0580029801.01.T01:intron 10.0%
!! TTCATTATCAATTATTATTT+GGG - Chr5:102135667-102135686 MsG0580029801.01.T01:CDS 10.0%
!!! TATAATATTTTCATAGTTTA+GGG + Chr5:102136334-102136353 None:intergenic 10.0%
!!! TGTCAATTTTTTTTTATATT+AGG - Chr5:102139031-102139050 MsG0580029801.01.T01:intron 10.0%
!!! TTATAATATTTTCATAGTTT+AGG + Chr5:102136335-102136354 None:intergenic 10.0%
!! AGTAACTTTAACATAAATAT+AGG - Chr5:102137731-102137750 MsG0580029801.01.T01:intron 15.0%
!! CTTCATTATCAATTATTATT+TGG - Chr5:102135666-102135685 MsG0580029801.01.T01:CDS 15.0%
!!! ATTTTATGGTTTTTTTTATG+TGG - Chr5:102135704-102135723 MsG0580029801.01.T01:CDS 15.0%
!!! CAAATAATAATTGATAATGA+AGG + Chr5:102135668-102135687 None:intergenic 15.0%
!!! TTGGTTTTAAAAGTTAAATT+TGG - Chr5:102137788-102137807 MsG0580029801.01.T01:intron 15.0%
!! AAACAATATAACTGAAATAG+TGG - Chr5:102137646-102137665 MsG0580029801.01.T01:intron 20.0%
!! AAATATGTTTGGGTAAAATA+CGG - Chr5:102137816-102137835 MsG0580029801.01.T01:intron 20.0%
!! AACAAATGTTGTTCATTAAT+AGG - Chr5:102136957-102136976 MsG0580029801.01.T01:intron 20.0%
!! AATACAATGTTCAAGTATTT+AGG - Chr5:102137759-102137778 MsG0580029801.01.T01:intron 20.0%
!! AATCAGAAAATGTATTTATG+TGG + Chr5:102137893-102137912 None:intergenic 20.0%
!! ATACTATATAAGATGAAGAA+AGG + Chr5:102137192-102137211 None:intergenic 20.0%
!! ATGGTTTATTCAAAATAAGA+AGG - Chr5:102136437-102136456 MsG0580029801.01.T01:intron 20.0%
!! ATGTACACAAATTCAATTTA+AGG + Chr5:102137232-102137251 None:intergenic 20.0%
!! ATTTGGAAACAAAATATGTT+TGG - Chr5:102137805-102137824 MsG0580029801.01.T01:intron 20.0%
!! GTAAATGATAGTTTACTTTA+AGG - Chr5:102136075-102136094 MsG0580029801.01.T01:intron 20.0%
!! TACTATATAAGATGAAGAAA+GGG + Chr5:102137191-102137210 None:intergenic 20.0%
!! TATATAATGAAAAAGCAACT+GGG + Chr5:102138819-102138838 None:intergenic 20.0%
!! TGGTTTATTCAAAATAAGAA+GGG - Chr5:102136438-102136457 MsG0580029801.01.T01:intron 20.0%
!! TTTGGAAACAAAATATGTTT+GGG - Chr5:102137806-102137825 MsG0580029801.01.T01:intron 20.0%
!!! AAATGTATTTATGTGGTTTT+TGG + Chr5:102137886-102137905 None:intergenic 20.0%
!!! AATGGAAAACTTTATTTTCT+TGG + Chr5:102136906-102136925 None:intergenic 20.0%
!!! AATTGTTTTACTTTGTTTGT+GGG - Chr5:102138891-102138910 MsG0580029801.01.T01:intron 20.0%
!!! CAATCTTGAAAAAGTTTTAA+GGG - Chr5:102137857-102137876 MsG0580029801.01.T01:intron 20.0%
!!! CTTAAAACTTTTTCAAGATT+GGG + Chr5:102137858-102137877 None:intergenic 20.0%
!!! GTGTTAATTTTTTGATAGAA+AGG - Chr5:102136645-102136664 MsG0580029801.01.T01:intron 20.0%
!!! TAATTGTTTTACTTTGTTTG+TGG - Chr5:102138890-102138909 MsG0580029801.01.T01:intron 20.0%
!!! TGTGATTGATATTGATTTTA+TGG - Chr5:102135690-102135709 MsG0580029801.01.T01:CDS 20.0%
!!! TTAATTTTTTGATAGAAAGG+TGG - Chr5:102136648-102136667 MsG0580029801.01.T01:intron 20.0%
!!! TTGATTGATGATAGAAAATT+GGG - Chr5:102138865-102138884 MsG0580029801.01.T01:intron 20.0%
!!! TTTAGAATTTCAAAAGTTTG+AGG + Chr5:102138550-102138569 None:intergenic 20.0%
!!! TTTATTTTCTTGGTTACAAA+AGG + Chr5:102136896-102136915 None:intergenic 20.0%
!!! TTTGATTGATGATAGAAAAT+TGG - Chr5:102138864-102138883 MsG0580029801.01.T01:intron 20.0%
! AAAATACATTGACCAAATTG+TGG + Chr5:102135877-102135896 None:intergenic 25.0%
! AAACGAAATTGATGAAGAAA+TGG + Chr5:102135123-102135142 None:intergenic 25.0%
! AAAGCAAAAAGATAGAACAA+AGG + Chr5:102138945-102138964 None:intergenic 25.0%
! AATTAATGGTTTCTGATTGA+TGG - Chr5:102136418-102136437 MsG0580029801.01.T01:intron 25.0%
! ACAATTTATTGCAAGTACAA+AGG + Chr5:102137507-102137526 None:intergenic 25.0%
! ACGAAGTTTCAAATACTAAA+GGG + Chr5:102136363-102136382 None:intergenic 25.0%
! AGATAAAAAGGAAAATGAAC+AGG + Chr5:102139855-102139874 None:intergenic 25.0%
! AGTAAAATAACTTCTGAACA+TGG + Chr5:102136053-102136072 None:intergenic 25.0%
! ATCGACAAAAAATAAGAACT+GGG + Chr5:102135539-102135558 None:intergenic 25.0%
! ATTATAAAACTGACAACTTG+TGG + Chr5:102139269-102139288 None:intergenic 25.0%
! CAACATTAAAACAATTAGCA+CGG + Chr5:102137601-102137620 None:intergenic 25.0%
! CATCAATAGAAATAGGAATT+GGG + Chr5:102135437-102135456 None:intergenic 25.0%
! CCTATAGAAGATAAGAAAAT+CGG - Chr5:102137684-102137703 MsG0580029801.01.T01:intron 25.0%
! CTATAGAAGATAAGAAAATC+GGG - Chr5:102137685-102137704 MsG0580029801.01.T01:intron 25.0%
! CTATATAATGAAAAAGCAAC+TGG + Chr5:102138820-102138839 None:intergenic 25.0%
! GATAAAAAGGAAAATGAACA+GGG + Chr5:102139854-102139873 None:intergenic 25.0%
! GATACAATCAAAGAAAAACA+AGG + Chr5:102136258-102136277 None:intergenic 25.0%
! GCATCAAAAAAATAAGAACT+GGG + Chr5:102135592-102135611 None:intergenic 25.0%
! GTAAAATAACTTCTGAACAT+GGG + Chr5:102136052-102136071 None:intergenic 25.0%
! TACACAAATTCAATTTAAGG+TGG + Chr5:102137229-102137248 None:intergenic 25.0%
! TACATTGCATCAATAGAAAT+AGG + Chr5:102135444-102135463 None:intergenic 25.0%
! TGAAGAATACCAAGATAAAA+AGG + Chr5:102139867-102139886 None:intergenic 25.0%
! TGATATTTACTGCTATTGAT+AGG - Chr5:102139290-102139309 MsG0580029801.01.T01:CDS 25.0%
! TGCATCAAAAAAATAAGAAC+TGG + Chr5:102135593-102135612 None:intergenic 25.0%
! TGGAAAAGTTTGTAAAAAAG+AGG + Chr5:102138689-102138708 None:intergenic 25.0%
! TTTATGATTTCAGAAAAGAG+TGG - Chr5:102139768-102139787 MsG0580029801.01.T01:intron 25.0%
! TTTATTCAAAATAAGAAGGG+TGG - Chr5:102136441-102136460 MsG0580029801.01.T01:intron 25.0%
! TTTATTTATTCCTCCAACAT+TGG - Chr5:102135911-102135930 MsG0580029801.01.T01:intron 25.0%
!! ACACAAATTCAATTTAAGGT+GGG + Chr5:102137228-102137247 None:intergenic 25.0%
!! ACTAATTTGTATACCAATGT+TGG + Chr5:102135927-102135946 None:intergenic 25.0%
!! CCAATCTTGAAAAAGTTTTA+AGG - Chr5:102137856-102137875 MsG0580029801.01.T01:intron 25.0%
!! GCAATCTAATTTTCATCAAT+GGG - Chr5:102135742-102135761 MsG0580029801.01.T01:intron 25.0%
!! GTTCATTTTCCTTTTTATCT+TGG - Chr5:102139855-102139874 MsG0580029801.01.T01:exon 25.0%
!! TGCAATCTAATTTTCATCAA+TGG - Chr5:102135741-102135760 MsG0580029801.01.T01:intron 25.0%
!! TTTAGTATTTGAAACTTCGT+CGG - Chr5:102136363-102136382 MsG0580029801.01.T01:intron 25.0%
!! TTTGTTGAGATATAGCTTTT+GGG - Chr5:102138317-102138336 MsG0580029801.01.T01:CDS 25.0%
!! TTTTGTTGAGATATAGCTTT+TGG - Chr5:102138316-102138335 MsG0580029801.01.T01:CDS 25.0%
!!! ATACAAAAAGTGTCCATAAT+TGG + Chr5:102137272-102137291 None:intergenic 25.0%
!!! ATTGTTTTACTTTGTTTGTG+GGG - Chr5:102138892-102138911 MsG0580029801.01.T01:intron 25.0%
!!! CCTTAAAACTTTTTCAAGAT+TGG + Chr5:102137859-102137878 None:intergenic 25.0%
AAGAAAAAATCAACGCAAAC+AGG + Chr5:102138270-102138289 None:intergenic 30.0%
AAGAAGTGAAGTTAATAGAG+TGG - Chr5:102139096-102139115 MsG0580029801.01.T01:intron 30.0%
AATAAGAAGGGTGGTAAAAA+TGG - Chr5:102136450-102136469 MsG0580029801.01.T01:intron 30.0%
AATATCAGGGACTGAATTAA+TGG - Chr5:102136404-102136423 MsG0580029801.01.T01:intron 30.0%
AATCAAAGAAAAACAAGGCT+GGG + Chr5:102136253-102136272 None:intergenic 30.0%
AATCTCTCAGCAATAAAATC+AGG + Chr5:102139534-102139553 None:intergenic 30.0%
AATTCAATGCACAATCAGAT+TGG + Chr5:102135338-102135357 None:intergenic 30.0%
AATTTGTATACCAATGTTGG+AGG + Chr5:102135924-102135943 None:intergenic 30.0%
ACAATGTTCAAGTATTTAGG+TGG - Chr5:102137762-102137781 MsG0580029801.01.T01:intron 30.0%
ACACAACAAAAATATGCAGA+AGG + Chr5:102138361-102138380 None:intergenic 30.0%
ACACTTAATCTGTGTGAAAA+AGG + Chr5:102137334-102137353 None:intergenic 30.0%
ACCTATGTCAAACTTTAACA+AGG - Chr5:102136789-102136808 MsG0580029801.01.T01:intron 30.0%
AGAAAAAATCAACGCAAACA+GGG + Chr5:102138269-102138288 None:intergenic 30.0%
AGTTATTAAACACGCACTTA+AGG - Chr5:102135977-102135996 MsG0580029801.01.T01:intron 30.0%
AGTTTAAGTGTACAGAGAAT+CGG - Chr5:102139340-102139359 MsG0580029801.01.T01:intron 30.0%
CAAAATCATGCAGAGATAAT+TGG + Chr5:102138709-102138728 None:intergenic 30.0%
CATCGACAAAAAATAAGAAC+TGG + Chr5:102135540-102135559 None:intergenic 30.0%
CTTGGTTGTAAATGCAAAAA+GGG - Chr5:102139906-102139925 MsG0580029801.01.T01:five_prime_UTR 30.0%
GAAAAGATTCTAGATGAACT+GGG - Chr5:102139591-102139610 MsG0580029801.01.T01:intron 30.0%
GAAAGGAAATCTAATATCTG+TGG + Chr5:102136874-102136893 None:intergenic 30.0%
GACGAAGTTTCAAATACTAA+AGG + Chr5:102136364-102136383 None:intergenic 30.0%
GCATCAATAGAAATAGGAAT+TGG + Chr5:102135438-102135457 None:intergenic 30.0%
GCTGGTAATAAAGATATGAA+TGG - Chr5:102139699-102139718 MsG0580029801.01.T01:intron 30.0%
GGAAAGAATAGTATAAACTC+TGG - Chr5:102137706-102137725 MsG0580029801.01.T01:intron 30.0%
GTGATATCAAACTCCAATTA+TGG - Chr5:102137256-102137275 MsG0580029801.01.T01:intron 30.0%
GTGCATTGAATTTCAGTAAT+TGG - Chr5:102135346-102135365 MsG0580029801.01.T01:CDS 30.0%
TAAATGAACAGCTGTAGATT+AGG + Chr5:102136842-102136861 None:intergenic 30.0%
TCATAGAATCAGAATCAGAT+AGG - Chr5:102137136-102137155 MsG0580029801.01.T01:intron 30.0%
TCCCTAACATCTTAATATCA+GGG - Chr5:102136391-102136410 MsG0580029801.01.T01:intron 30.0%
TCCCTGATATTAAGATGTTA+GGG + Chr5:102136395-102136414 None:intergenic 30.0%
TCTTCTGTTGAAAAACTTGA+AGG + Chr5:102139490-102139509 None:intergenic 30.0%
TCTTCTTTGACAACGTAAAA+TGG + Chr5:102135206-102135225 None:intergenic 30.0%
TCTTGGTTGTAAATGCAAAA+AGG - Chr5:102139905-102139924 MsG0580029801.01.T01:five_prime_UTR 30.0%
TGAGATGGAAAATATTCTCT+TGG - Chr5:102137291-102137310 MsG0580029801.01.T01:intron 30.0%
TGGATCAAGTAATAAAGTCA+TGG + Chr5:102135318-102135337 None:intergenic 30.0%
TTAACATGTGTGATAAAGAG+AGG + Chr5:102136561-102136580 None:intergenic 30.0%
TTCTAACAATTGCGAAATGA+AGG + Chr5:102135260-102135279 None:intergenic 30.0%
TTTCTTGGTTACAAAAGGAA+AGG + Chr5:102136891-102136910 None:intergenic 30.0%
! AACTGTTTTGCATTACAACA+AGG + Chr5:102138390-102138409 None:intergenic 30.0%
! ATCTTTTGTCTTCTCAAACT+TGG + Chr5:102139934-102139953 None:intergenic 30.0%
! CATAATGGAAGCCTTAATTA+GGG + Chr5:102138462-102138481 None:intergenic 30.0%
! CCGATTTTCTTATCTTCTAT+AGG + Chr5:102137687-102137706 None:intergenic 30.0%
! TCAAGTATTTAGGTGGTTTT+TGG - Chr5:102137769-102137788 MsG0580029801.01.T01:intron 30.0%
! TCATAATGGAAGCCTTAATT+AGG + Chr5:102138463-102138482 None:intergenic 30.0%
! TTGTTGAGATATAGCTTTTG+GGG - Chr5:102138318-102138337 MsG0580029801.01.T01:CDS 30.0%
! TTTTATGTGGCAAGATTGAT+AGG - Chr5:102135717-102135736 MsG0580029801.01.T01:CDS 30.0%
!! CTCTCTGATTTTAATATTGC+TGG - Chr5:102139681-102139700 MsG0580029801.01.T01:intron 30.0%
!! TGACATAGGTTATTTTACCT+GGG + Chr5:102136779-102136798 None:intergenic 30.0%
!! TGCATATTTTTGTTGTGTGT+GGG - Chr5:102138363-102138382 MsG0580029801.01.T01:CDS 30.0%
!! TTGACATAGGTTATTTTACC+TGG + Chr5:102136780-102136799 None:intergenic 30.0%
!! TTTTCTCAGAATCTGGAATT+GGG + Chr5:102135162-102135181 None:intergenic 30.0%
!! TTTTTCTCAGAATCTGGAAT+TGG + Chr5:102135163-102135182 None:intergenic 30.0%
!!! GCATTTTTTTTCTCAGAATC+TGG + Chr5:102135169-102135188 None:intergenic 30.0%
!!! TGCGTTGATTTTTTCTTACT+TGG - Chr5:102138273-102138292 MsG0580029801.01.T01:intron 30.0%
AAAGAACATCCATTCCTAGA+AGG + Chr5:102139239-102139258 None:intergenic 35.0%
ACAACTCATGCTAGTATAAG+TGG - Chr5:102137027-102137046 MsG0580029801.01.T01:intron 35.0%
ACTTAAGGTATGTCTGAGTT+TGG - Chr5:102135992-102136011 MsG0580029801.01.T01:intron 35.0%
AGACTGAGAAACTGTATTGA+AGG + Chr5:102138214-102138233 None:intergenic 35.0%
AGCATTGCTAATATTTGACG+TGG - Chr5:102136580-102136599 MsG0580029801.01.T01:intron 35.0%
AGTACAAAGGATCTTACATC+TGG + Chr5:102137494-102137513 None:intergenic 35.0%
AGTTTGAACAGATTGTATCG+CGG + Chr5:102136617-102136636 None:intergenic 35.0%
ATCAAAGAAAAACAAGGCTG+GGG + Chr5:102136252-102136271 None:intergenic 35.0%
ATGAAGTGGAGATTGAAAAC+CGG - Chr5:102136728-102136747 MsG0580029801.01.T01:intron 35.0%
ATGGAGTCTAGTGAAAATGT+TGG - Chr5:102136469-102136488 MsG0580029801.01.T01:intron 35.0%
ATTTCAGAAAAGAGTGGCAA+TGG - Chr5:102139774-102139793 MsG0580029801.01.T01:intron 35.0%
CAACTCATGCTAGTATAAGT+GGG - Chr5:102137028-102137047 MsG0580029801.01.T01:intron 35.0%
CAATCAAAGAAAAACAAGGC+TGG + Chr5:102136254-102136273 None:intergenic 35.0%
CAGCAGATAAAGAAAAGGAA+TGG + Chr5:102136924-102136943 None:intergenic 35.0%
CATAGTTACAGATCAGAACT+GGG + Chr5:102135643-102135662 None:intergenic 35.0%
CGAAATTGATGAAGAAATGG+AGG + Chr5:102135120-102135139 None:intergenic 35.0%
CTCTTTACTACACTGTTGAA+TGG - Chr5:102138756-102138775 MsG0580029801.01.T01:intron 35.0%
GGAAAAGATTCTAGATGAAC+TGG - Chr5:102139590-102139609 MsG0580029801.01.T01:intron 35.0%
GTCAAACTTTAACAAGGCTA+AGG - Chr5:102136795-102136814 MsG0580029801.01.T01:intron 35.0%
GTCCCTAACATCTTAATATC+AGG - Chr5:102136390-102136409 MsG0580029801.01.T01:intron 35.0%
GTCCCTGATATTAAGATGTT+AGG + Chr5:102136396-102136415 None:intergenic 35.0%
TAAAATGGATCTTGAGCTGA+GGG + Chr5:102135191-102135210 None:intergenic 35.0%
TAATGCAAAACAGTTGCTGT+TGG - Chr5:102138395-102138414 MsG0580029801.01.T01:intron 35.0%
TACATTGACCAAATTGTGGA+AGG + Chr5:102135873-102135892 None:intergenic 35.0%
TACTGTTGAAAATCAACTGC+AGG + Chr5:102138792-102138811 None:intergenic 35.0%
TATAATGCACTCTGCTTAAG+AGG + Chr5:102137458-102137477 None:intergenic 35.0%
TATCTCAACAAAAGAAGCCA+CGG + Chr5:102138309-102138328 None:intergenic 35.0%
TCATAGTTACAGATCAGAAC+TGG + Chr5:102135644-102135663 None:intergenic 35.0%
TCATGCAGCAGATAAAGAAA+AGG + Chr5:102136929-102136948 None:intergenic 35.0%
TGATAGAAAGGTGGATGAAT+TGG - Chr5:102136657-102136676 MsG0580029801.01.T01:intron 35.0%
TGTCAAAATCTTGATGCTTC+AGG - Chr5:102139569-102139588 MsG0580029801.01.T01:intron 35.0%
TTAAGGCTTCCATTATGAGT+TGG - Chr5:102138465-102138484 MsG0580029801.01.T01:intron 35.0%
TTGGACAAAATCTAGACGAT+TGG + Chr5:102139637-102139656 None:intergenic 35.0%
! AACAATTAGCACGGATTACA+AGG + Chr5:102137592-102137611 None:intergenic 35.0%
! AATGCAAAACAGTTGCTGTT+GGG - Chr5:102138396-102138415 MsG0580029801.01.T01:intron 35.0%
! GCCTTGTTAAAGTTTGACAT+AGG + Chr5:102136793-102136812 None:intergenic 35.0%
! TGTTGAGATATAGCTTTTGG+GGG - Chr5:102138319-102138338 MsG0580029801.01.T01:CDS 35.0%
! TTCAAAAGTTTGAGGTGCAT+GGG + Chr5:102138542-102138561 None:intergenic 35.0%
! TTTACTTTGTTTGTGGGGTT+GGG - Chr5:102138897-102138916 MsG0580029801.01.T01:intron 35.0%
! TTTCAAAAGTTTGAGGTGCA+TGG + Chr5:102138543-102138562 None:intergenic 35.0%
!! CTGCATATTTTTGTTGTGTG+TGG - Chr5:102138362-102138381 MsG0580029801.01.T01:CDS 35.0%
!! GCTTTGAAAAGTAGTAGACT+AGG - Chr5:102139443-102139462 MsG0580029801.01.T01:intron 35.0%
!! TGGACACTTTTTGTATGAGA+TGG - Chr5:102137276-102137295 MsG0580029801.01.T01:intron 35.0%
!! TTTTACTTTGTTTGTGGGGT+TGG - Chr5:102138896-102138915 MsG0580029801.01.T01:intron 35.0%
AAAACAATGTCGCACAGGAA+CGG + Chr5:102138059-102138078 None:intergenic 40.0%
AAAACAGAAAACCACCTACG+AGG - Chr5:102139203-102139222 MsG0580029801.01.T01:intron 40.0%
AAGTCTAACCAATATGCCTC+TGG - Chr5:102137099-102137118 MsG0580029801.01.T01:intron 40.0%
ACAATACATGAAGAGCTCCT+TGG - Chr5:102139376-102139395 MsG0580029801.01.T01:intron 40.0%
AGATGAACTGGGAAATGAGA+TGG - Chr5:102139602-102139621 MsG0580029801.01.T01:intron 40.0%
AGTCTAACCAATATGCCTCT+GGG - Chr5:102137100-102137119 MsG0580029801.01.T01:intron 40.0%
ATCTCAACAAAAGAAGCCAC+GGG + Chr5:102138308-102138327 None:intergenic 40.0%
ATTAAGAGAACAGTGGAAGC+TGG - Chr5:102136988-102137007 MsG0580029801.01.T01:intron 40.0%
ATTATGCTCAACAGTGTGAC+TGG - Chr5:102138606-102138625 MsG0580029801.01.T01:intron 40.0%
CAAGACATTCAGAAACGACT+AGG + Chr5:102139890-102139909 None:intergenic 40.0%
CAATACATGAAGAGCTCCTT+GGG - Chr5:102139377-102139396 MsG0580029801.01.T01:intron 40.0%
CAGAGAGCAAAATCCAAAAG+CGG + Chr5:102139668-102139687 None:intergenic 40.0%
CAGCAAGAACTTCCTTTGAA+AGG + Chr5:102135799-102135818 None:intergenic 40.0%
CGAGCATTTGAACCTTTCAA+AGG - Chr5:102135784-102135803 MsG0580029801.01.T01:intron 40.0%
CTAGTCGTTTCTGAATGTCT+TGG - Chr5:102139888-102139907 MsG0580029801.01.T01:five_prime_UTR 40.0%
GAAATCATCATTATCCCCAG+AGG + Chr5:102137118-102137137 None:intergenic 40.0%
GACGTACTTTGATGAGAATC+TGG + Chr5:102137078-102137097 None:intergenic 40.0%
GCACACAATTAAGAGAACAG+TGG - Chr5:102136981-102137000 MsG0580029801.01.T01:intron 40.0%
GCGTCAAAAGAGAATACACA+CGG + Chr5:102137958-102137977 None:intergenic 40.0%
GGAGTTTAATCTAGATCAGC+CGG - Chr5:102136013-102136032 MsG0580029801.01.T01:intron 40.0%
GTAAAATGGATCTTGAGCTG+AGG + Chr5:102135192-102135211 None:intergenic 40.0%
GTCCACAATTGTTCCAGTTA+CGG - Chr5:102138023-102138042 MsG0580029801.01.T01:CDS 40.0%
TAGCATCTAGAGATCCTTCT+TGG - Chr5:102136695-102136714 MsG0580029801.01.T01:intron 40.0%
TAGTATAAGTGGGATGCACA+GGG - Chr5:102137038-102137057 MsG0580029801.01.T01:intron 40.0%
TAGTGAAGCCTTCCACAATT+TGG - Chr5:102135862-102135881 MsG0580029801.01.T01:intron 40.0%
TATCATCGCTTGCATGAACT+GGG - Chr5:102135947-102135966 MsG0580029801.01.T01:intron 40.0%
TCAAAAGAGAATACACACGG+TGG + Chr5:102137955-102137974 None:intergenic 40.0%
TCATCAATGCCATACCAAGA+AGG + Chr5:102136712-102136731 None:intergenic 40.0%
TCTAGAGATCCTTCTTGGTA+TGG - Chr5:102136700-102136719 MsG0580029801.01.T01:intron 40.0%
TGCATCTCATGTTTAAGCCA+GGG - Chr5:102138427-102138446 MsG0580029801.01.T01:intron 40.0%
TGGGAAAACACTTCTGATAC+TGG - Chr5:102135761-102135780 MsG0580029801.01.T01:intron 40.0%
TTAAGTGTACAGAGAATCGG+AGG - Chr5:102139343-102139362 MsG0580029801.01.T01:intron 40.0%
TTATCATCGCTTGCATGAAC+TGG - Chr5:102135946-102135965 MsG0580029801.01.T01:intron 40.0%
! AAAACAGTTGCTGTTGGGTT+GGG - Chr5:102138401-102138420 MsG0580029801.01.T01:intron 40.0%
! CAGAATCTGGAATTGGGAAT+TGG + Chr5:102135156-102135175 None:intergenic 40.0%
! GATGATGATATGTGGTTTGC+TGG - Chr5:102139828-102139847 MsG0580029801.01.T01:CDS 40.0%
! TCCATTATGAGTTGGCAGTA+GGG - Chr5:102138473-102138492 MsG0580029801.01.T01:intron 40.0%
! TCTGGAATTGGGAATTGGAA+TGG + Chr5:102135151-102135170 None:intergenic 40.0%
! TTCCATTATGAGTTGGCAGT+AGG - Chr5:102138472-102138491 MsG0580029801.01.T01:intron 40.0%
! TTTTCACCTTTCCTACCACA+GGG + Chr5:102136285-102136304 None:intergenic 40.0%
! TTTTTCACCTTTCCTACCAC+AGG + Chr5:102136286-102136305 None:intergenic 40.0%
!! TTGGTATGGCATTGATGAAG+TGG - Chr5:102136714-102136733 MsG0580029801.01.T01:intron 40.0%
AAAGAAAAACAAGGCTGGGG+AGG + Chr5:102136249-102136268 None:intergenic 45.0%
AAGTGGAGATTGAAAACCGG+AGG - Chr5:102136731-102136750 MsG0580029801.01.T01:intron 45.0%
AGAACAGTGGAAGCTGGAAA+GGG - Chr5:102136994-102137013 MsG0580029801.01.T01:intron 45.0%
AGGAACGTTACTCACAGGAA+AGG + Chr5:102138109-102138128 None:intergenic 45.0%
ATATATCAGCTACCTGCCCA+AGG + Chr5:102139396-102139415 None:intergenic 45.0%
ATCTCATGTTTAAGCCAGGG+AGG - Chr5:102138430-102138449 MsG0580029801.01.T01:intron 45.0%
ATGAAGAAGGCCAGTGCAAA+GGG - Chr5:102139799-102139818 MsG0580029801.01.T01:intron 45.0%
CAATTGTGGACGAACGGAAA+TGG + Chr5:102138014-102138033 None:intergenic 45.0%
CATGTGTGATAAAGAGAGGC+TGG + Chr5:102136557-102136576 None:intergenic 45.0%
CATTCCTAGAAGGTTCCCTA+AGG + Chr5:102139229-102139248 None:intergenic 45.0%
CTAGTATAAGTGGGATGCAC+AGG - Chr5:102137037-102137056 MsG0580029801.01.T01:intron 45.0%
CTGCATCTCATGTTTAAGCC+AGG - Chr5:102138426-102138445 MsG0580029801.01.T01:intron 45.0%
CTGGAACAATTGTGGACGAA+CGG + Chr5:102138020-102138039 None:intergenic 45.0%
GGAGGGTGATTCCCTAATTA+AGG - Chr5:102138448-102138467 MsG0580029801.01.T01:intron 45.0%
GGATGCACAGGGAATTAATG+AGG - Chr5:102137049-102137068 MsG0580029801.01.T01:intron 45.0%
GGTCGATACAGTGAAGGTTA+CGG + Chr5:102138160-102138179 None:intergenic 45.0%
GTAGACTAAGTGTGTGCTTG+TGG + Chr5:102136518-102136537 None:intergenic 45.0%
GTCTAACCAATATGCCTCTG+GGG - Chr5:102137101-102137120 MsG0580029801.01.T01:intron 45.0%
GTTTAATCTAGATCAGCCGG+AGG - Chr5:102136016-102136035 MsG0580029801.01.T01:intron 45.0%
TAAGTGTGTGCTTGTGGAGT+TGG + Chr5:102136512-102136531 None:intergenic 45.0%
TACTGCTATTGATAGGCAGC+AGG - Chr5:102139297-102139316 MsG0580029801.01.T01:CDS 45.0%
TACTTGGCATTGTTATCCCG+TGG - Chr5:102138289-102138308 MsG0580029801.01.T01:CDS 45.0%
TCAACGCAAACAGGGTAACA+TGG + Chr5:102138261-102138280 None:intergenic 45.0%
TCCAAAAGCGGAAACTCACT+TGG + Chr5:102139656-102139675 None:intergenic 45.0%
TCCCTACTGCCAACTCATAA+TGG + Chr5:102138477-102138496 None:intergenic 45.0%
TCTCATGTTTAAGCCAGGGA+GGG - Chr5:102138431-102138450 MsG0580029801.01.T01:intron 45.0%
TGCCGTAACTGGAACAATTG+TGG + Chr5:102138028-102138047 None:intergenic 45.0%
TTGATTGTATCCCTTCCCTG+TGG - Chr5:102136267-102136286 MsG0580029801.01.T01:intron 45.0%
TTGCGCAACATCGTTTCTGT+CGG - Chr5:102138078-102138097 MsG0580029801.01.T01:intron 45.0%
! AAACAGTTGCTGTTGGGTTG+GGG - Chr5:102138402-102138421 MsG0580029801.01.T01:intron 45.0%
! AAGGAAGTTCTTGCTGCTTG+TGG - Chr5:102135803-102135822 MsG0580029801.01.T01:intron 45.0%
! AGTGGCAATGGTGATGAAGA+AGG - Chr5:102139786-102139805 MsG0580029801.01.T01:intron 45.0%
! CAAAACAGTTGCTGTTGGGT+TGG - Chr5:102138400-102138419 MsG0580029801.01.T01:intron 45.0%
! CATTATCCCCAGAGGCATAT+TGG + Chr5:102137110-102137129 None:intergenic 45.0%
! CTTAGGGAACCTTCTAGGAA+TGG - Chr5:102139227-102139246 MsG0580029801.01.T01:CDS 45.0%
! GGGCAGATGATGATGATATG+TGG - Chr5:102139820-102139839 MsG0580029801.01.T01:CDS 45.0%
! TATGAGTTGGCAGTAGGGAA+GGG - Chr5:102138478-102138497 MsG0580029801.01.T01:intron 45.0%
! TCCAAGTGAGTTTCCGCTTT+TGG - Chr5:102139652-102139671 MsG0580029801.01.T01:intron 45.0%
! TTATGAGTTGGCAGTAGGGA+AGG - Chr5:102138477-102138496 MsG0580029801.01.T01:intron 45.0%
!! CTGCTTGTGGAAGTATTGAG+TGG - Chr5:102135816-102135835 MsG0580029801.01.T01:intron 45.0%
!! TAAAGCGTCGCACACAATGA+AGG + Chr5:102138188-102138207 None:intergenic 45.0%
!! TGAGATATAGCTTTTGGGGG+TGG - Chr5:102138322-102138341 MsG0580029801.01.T01:CDS 45.0%
!! TTGTGGAAGTATTGAGTGGC+AGG - Chr5:102135820-102135839 MsG0580029801.01.T01:intron 45.0%
!! TTGTGGGGTTGGGTTTGTTT+TGG - Chr5:102138907-102138926 MsG0580029801.01.T01:intron 45.0%
AAAACCACCTACGAGGCCTT+AGG - Chr5:102139210-102139229 MsG0580029801.01.T01:intron 50.0%
AAACCACCTACGAGGCCTTA+GGG - Chr5:102139211-102139230 MsG0580029801.01.T01:intron 50.0%
AATTAGGGAATCACCCTCCC+TGG + Chr5:102138447-102138466 None:intergenic 50.0%
ACCTTTCCTACCACAGGGAA+GGG + Chr5:102136280-102136299 None:intergenic 50.0%
AGATTGAAAACCGGAGGAGG+TGG - Chr5:102136737-102136756 MsG0580029801.01.T01:intron 50.0%
CATGGGAAGATCACTTCCTC+CGG + Chr5:102136035-102136054 None:intergenic 50.0%
GAGAACAGTGGAAGCTGGAA+AGG - Chr5:102136993-102137012 MsG0580029801.01.T01:intron 50.0%
GATGAAGAAGGCCAGTGCAA+AGG - Chr5:102139798-102139817 MsG0580029801.01.T01:intron 50.0%
GCGCAAAAACAATGTCGCAC+AGG + Chr5:102138064-102138083 None:intergenic 50.0%
GTCGCACACAATGAAGGCTA+GGG + Chr5:102138182-102138201 None:intergenic 50.0%
TATTGATAGGCAGCAGGACG+AGG - Chr5:102139303-102139322 MsG0580029801.01.T01:CDS 50.0%
TCGCACACAATGAAGGCTAG+GGG + Chr5:102138181-102138200 None:intergenic 50.0%
TGAAGAAGGCCAGTGCAAAG+GGG - Chr5:102139800-102139819 MsG0580029801.01.T01:intron 50.0%
TGGAGATTGAAAACCGGAGG+AGG - Chr5:102136734-102136753 MsG0580029801.01.T01:intron 50.0%
TGTGATAAAGAGAGGCTGGC+AGG + Chr5:102136553-102136572 None:intergenic 50.0%
TTGTATCCCTTCCCTGTGGT+AGG - Chr5:102136271-102136290 MsG0580029801.01.T01:intron 50.0%
! GTACAGAGAATCGGAGGTGT+TGG - Chr5:102139349-102139368 MsG0580029801.01.T01:intron 50.0%
!! AACAGTTGCTGTTGGGTTGG+GGG - Chr5:102138403-102138422 MsG0580029801.01.T01:intron 50.0%
AAAAACAAGGCTGGGGAGGC+GGG + Chr5:102136245-102136264 None:intergenic 55.0%
AACAGGGTAACATGGAGCGC+AGG + Chr5:102138253-102138272 None:intergenic 55.0%
AAGGTTACGGCATCACGAGC+AGG + Chr5:102138147-102138166 None:intergenic 55.0%
AAGGTTCCCTAAGGCCTCGT+AGG + Chr5:102139220-102139239 None:intergenic 55.0%
ACAATGTCGCACAGGAACGG+TGG + Chr5:102138056-102138075 None:intergenic 55.0%
ACATGAAGAGCTCCTTGGGC+AGG - Chr5:102139381-102139400 MsG0580029801.01.T01:intron 55.0%
AGGTTACGGCATCACGAGCA+GGG + Chr5:102138146-102138165 None:intergenic 55.0%
CACCTTTCCTACCACAGGGA+AGG + Chr5:102136281-102136300 None:intergenic 55.0%
CATCATCTGCCCCTTTGCAC+TGG + Chr5:102139812-102139831 None:intergenic 55.0%
CCTGCAGGAACGTTACTCAC+AGG + Chr5:102138114-102138133 None:intergenic 55.0%
CCTGTGAGTAACGTTCCTGC+AGG - Chr5:102138111-102138130 MsG0580029801.01.T01:intron 55.0%
CGTCGCACACAATGAAGGCT+AGG + Chr5:102138183-102138202 None:intergenic 55.0%
GAAAAACAAGGCTGGGGAGG+CGG + Chr5:102136246-102136265 None:intergenic 55.0%
GAGGCCTTAGGGAACCTTCT+AGG - Chr5:102139222-102139241 MsG0580029801.01.T01:CDS 55.0%
GCTAGGGGTCGATACAGTGA+AGG + Chr5:102138166-102138185 None:intergenic 55.0%
GGTAACATGGAGCGCAGGAA+GGG + Chr5:102138248-102138267 None:intergenic 55.0%
GTGGACGAACGGAAATGGCA+GGG + Chr5:102138009-102138028 None:intergenic 55.0%
TCCCTTCCCTGTGGTAGGAA+AGG - Chr5:102136276-102136295 MsG0580029801.01.T01:intron 55.0%
TGGACGAACGGAAATGGCAG+GGG + Chr5:102138008-102138027 None:intergenic 55.0%
TGTGGACGAACGGAAATGGC+AGG + Chr5:102138010-102138029 None:intergenic 55.0%
AAAACAAGGCTGGGGAGGCG+GGG + Chr5:102136244-102136263 None:intergenic 60.0%
AGCGCAGGAAGGGAATGGTG+TGG + Chr5:102138238-102138257 None:intergenic 60.0%
ATGTCGCACAGGAACGGTGG+CGG + Chr5:102138053-102138072 None:intergenic 60.0%
CATGGAGCGCAGGAAGGGAA+TGG + Chr5:102138243-102138262 None:intergenic 60.0%
CATTGCTGGTCCACCTCCTC+CGG + Chr5:102136750-102136769 None:intergenic 60.0%
GACGAACGGAAATGGCAGGG+GGG + Chr5:102138006-102138025 None:intergenic 60.0%
GGACGAACGGAAATGGCAGG+GGG + Chr5:102138007-102138026 None:intergenic 60.0%
GGGTAACATGGAGCGCAGGA+AGG + Chr5:102138249-102138268 None:intergenic 60.0%
GTTCCCTAAGGCCTCGTAGG+TGG + Chr5:102139217-102139236 None:intergenic 60.0%
TACGGCATCACGAGCAGGGA+AGG + Chr5:102138142-102138161 None:intergenic 60.0%
! TACCTGGGTGCGAGCATTGC+TGG + Chr5:102136764-102136783 None:intergenic 60.0%
GACCAGCAATGCTCGCACCC+AGG - Chr5:102136759-102136778 MsG0580029801.01.T01:intron 65.0%
AAGGCTGGGGAGGCGGGGAA+AGG + Chr5:102136239-102136258 None:intergenic 70.0%
GCAGGGAAGGCTGTGCCTGC+AGG + Chr5:102138129-102138148 None:intergenic 70.0%
! CGGTGGCGGCGTGCCGTAAC+TGG + Chr5:102138039-102138058 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 102135098 102139956 102135098 ID=MsG0580029801.01;Name=MsG0580029801.01
Chr5 mRNA 102135098 102139956 102135098 ID=MsG0580029801.01.T01;Parent=MsG0580029801.01;Name=MsG0580029801.01.T01;_AED=0.40;_eAED=0.48;_QI=87|1|0.83|1|1|1|6|0|310
Chr5 exon 102135098 102135463 102135098 ID=MsG0580029801.01.T01:exon:6977;Parent=MsG0580029801.01.T01
Chr5 exon 102135652 102135742 102135652 ID=MsG0580029801.01.T01:exon:6976;Parent=MsG0580029801.01.T01
Chr5 exon 102137879 102138075 102137879 ID=MsG0580029801.01.T01:exon:6975;Parent=MsG0580029801.01.T01
Chr5 exon 102138274 102138387 102138274 ID=MsG0580029801.01.T01:exon:6974;Parent=MsG0580029801.01.T01
Chr5 exon 102139213 102139323 102139213 ID=MsG0580029801.01.T01:exon:6973;Parent=MsG0580029801.01.T01
Chr5 exon 102139816 102139956 102139816 ID=MsG0580029801.01.T01:exon:6972;Parent=MsG0580029801.01.T01
Chr5 five_prime_UTR 102139870 102139956 102139870 ID=MsG0580029801.01.T01:five_prime_utr;Parent=MsG0580029801.01.T01
Chr5 CDS 102139816 102139869 102139816 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Chr5 CDS 102139213 102139323 102139213 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Chr5 CDS 102138274 102138387 102138274 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Chr5 CDS 102137879 102138075 102137879 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Chr5 CDS 102135652 102135742 102135652 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Chr5 CDS 102135098 102135463 102135098 ID=MsG0580029801.01.T01:cds;Parent=MsG0580029801.01.T01
Gene Sequence

>MsG0580029801.01.T01

ATGCCCTCAGCTCAAGATCCATTTTACGTTGTCAAAGAAGATATTCAAGATTCTATTGATAGGTTGCAATCTAATTTTCATCAATGGGAAAACACTTCTGATACTGGCGAGCATTTGAACCTTTCAAAGGAAGTTCTTGCTGCTTGTGGAAGTATTGAGTGGCAGGTGGATGAATTGGACAAAGCAATTTCTGTAGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGATTGAAAACCGGAGGAGGTGGACCAGCAATGCTCGCACCCAGGTGCACACAATTAAGAGAACAGTGGAAGCTGGAAAGGGATCAAATACAACAACTCATGCTAGTATAAGTGGGATGCACAGGGAATTAATGAGGCTTCCAGATTCTCATCAAAGTACGTCTAAGTCTAACCAATATGCCTCTGGGGATAATGATGATTTCATAGAATCAGAATCAGATAGGCAAATGCTTCTTATAAAGCAGCAGGACGAGGAGTTAGATGAGCTTAGTTTAAGTGTACAGAGAATCGGAGGTGTTGGACTTACAATACATGAAGAGCTCCTTGGGCAGGAAAAGATTCTAGATGAACTGGGAAATGAGATGGACAGTACATCCAATCGTCTAGATTTTGTCCAAGTGAGTTTCCGCTTTTGGATTTTGCTCTCTGATTTTAATATTGCTGGTAATAAAGATATGAATGGAAAAGATTTGAATGTTGACGTGTGTAAGTTGATGCGCGTCTCTTTGTTTATGATTTCAGAAAAGAGTGGCAATGGTGATGAAGAAGGCCAGTGCAAAGGGGCAGATGATGATGATATGTGGTTTGCTGGCCCTGTTCATTTTCCTTTTTATCTTGGTATTCTTCACCTAGTCGTTTCTGAATGTCTTGGTTGTAAATGCAAAAAGGGATCCAAGTTTGAGAAGACAAAAGATTAA

Protein sequence

>MsG0580029801.01.T01

MPSAQDPFYVVKEDIQDSIDRLQSNFHQWENTSDTGEHLNLSKEVLAACGSIEWQVDELDKAISVASRDPSWYGIDEVEIENRRRWTSNARTQVHTIKRTVEAGKGSNTTTHASISGMHRELMRLPDSHQSTSKSNQYASGDNDDFIESESDRQMLLIKQQDEELDELSLSVQRIGGVGLTIHEELLGQEKILDELGNEMDSTSNRLDFVQVSFRFWILLSDFNIAGNKDMNGKDLNVDVCKLMRVSLFMISEKSGNGDEEGQCKGADDDDMWFAGPVHFPFYLGILHLVVSECLGCKCKKGSKFEKTKD*