AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015818.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015818.01.T01 MTR_5g014380 46.358 151 80 1 31 181 73 222 3.00e-44 149
MsG0380015818.01.T01 MTR_3g078130 100.000 73 0 0 181 253 1 73 1.39e-42 139
MsG0380015818.01.T01 MTR_5g053460 52.344 128 60 1 26 153 65 191 1.16e-38 134
MsG0380015818.01.T01 MTR_6g044010 44.366 142 77 2 31 171 58 198 4.00e-37 130
MsG0380015818.01.T01 MTR_1g046260 46.667 135 69 2 40 173 57 189 1.20e-36 128
MsG0380015818.01.T01 MTR_7g102890 40.341 176 99 3 3 174 82 255 6.72e-36 128
MsG0380015818.01.T01 MTR_8g078210 55.208 96 43 0 80 175 7 102 7.66e-31 110
MsG0380015818.01.T01 MTR_5g080210 39.437 142 85 1 34 175 40 180 8.13e-31 113
MsG0380015818.01.T01 MTR_7g013900 65.333 75 26 0 100 174 32 106 2.16e-30 109
MsG0380015818.01.T01 MTR_7g109880 41.379 116 67 1 28 143 10 124 4.84e-30 114
MsG0380015818.01.T01 MTR_3g052690 39.844 128 77 0 53 180 22 149 3.92e-29 107
MsG0380015818.01.T01 MTR_1g055370 42.991 107 52 1 78 175 28 134 4.79e-29 107
MsG0380015818.01.T01 MTR_4g036525 49.495 99 50 0 59 157 2 100 7.85e-29 108
MsG0380015818.01.T01 MTR_5g056220 60.000 75 30 0 102 176 1 75 1.87e-28 104
MsG0380015818.01.T01 MTR_5g036930 52.381 84 40 0 92 175 25 108 3.08e-28 106
MsG0380015818.01.T01 MTR_7g033295 40.000 130 77 1 37 166 45 173 4.63e-28 105
MsG0380015818.01.T01 MTR_8g037820 38.406 138 84 1 37 174 36 172 4.29e-27 103
MsG0380015818.01.T01 MTR_3g031290 42.063 126 73 0 55 180 157 282 6.13e-27 105
MsG0380015818.01.T01 MTR_3g065700 43.220 118 67 0 54 171 139 256 7.57e-27 104
MsG0380015818.01.T01 MTR_4g061240 35.938 128 82 0 47 174 73 200 1.27e-25 100
MsG0380015818.01.T01 MTR_2g062550 50.588 85 42 0 95 179 91 175 1.48e-25 101
MsG0380015818.01.T01 MTR_4g033220 46.552 116 45 3 51 149 63 178 2.73e-25 99.0
MsG0380015818.01.T01 MTR_7g052100 34.532 139 90 1 43 181 95 232 9.79e-25 98.6
MsG0380015818.01.T01 MTR_5g054985 39.344 122 74 0 53 174 2 123 1.73e-24 95.1
MsG0380015818.01.T01 MTR_6g084160 38.596 171 72 5 15 173 28 177 1.88e-24 97.4
MsG0380015818.01.T01 MTR_2g104350 42.982 114 61 2 63 174 125 236 1.99e-24 98.2
MsG0380015818.01.T01 MTR_2g031500 40.984 122 64 2 49 170 10 123 4.95e-24 93.6
MsG0380015818.01.T01 MTR_2g095160 31.325 166 111 2 17 180 13 177 5.05e-24 95.5
MsG0380015818.01.T01 MTR_4g097730 34.586 133 86 1 42 174 75 206 5.95e-24 96.3
MsG0380015818.01.T01 MTR_5g041190 33.750 160 87 4 16 175 69 209 1.43e-22 92.4
MsG0380015818.01.T01 MTR_5g025040 43.137 102 58 0 80 181 58 159 1.52e-22 90.9
MsG0380015818.01.T01 MTR_6g034085 36.719 128 69 2 55 181 2 118 1.47e-21 87.0
MsG0380015818.01.T01 MTR_6g016340 40.000 105 63 0 76 180 75 179 4.27e-20 85.1
MsG0380015818.01.T01 MTR_8g058405 72.917 48 13 0 91 138 150 197 7.29e-20 85.1
MsG0380015818.01.T01 MTR_8g024270 34.356 163 105 2 13 175 130 290 8.13e-20 86.7
MsG0380015818.01.T01 MTR_2g040320 37.895 95 59 0 81 175 9 103 3.42e-19 80.9
MsG0380015818.01.T01 MTR_5g054960 36.283 113 72 0 53 165 2 114 7.09e-19 80.9
MsG0380015818.01.T01 MTR_5g020880 48.649 74 38 0 102 175 1 74 2.06e-18 77.8
MsG0380015818.01.T01 MTR_5g061110 48.649 74 38 0 102 175 1 74 3.17e-18 77.0
MsG0380015818.01.T01 MTR_4g459430 34.028 144 82 4 30 165 211 349 2.08e-17 80.9
MsG0380015818.01.T01 MTR_4g059530 34.028 144 82 4 30 165 211 349 2.08e-17 80.9
MsG0380015818.01.T01 MTR_6g004570 34.862 109 67 2 16 124 149 253 4.63e-17 78.6
MsG0380015818.01.T01 MTR_2g089160 39.785 93 56 0 82 174 122 214 3.07e-16 75.5
MsG0380015818.01.T01 MTR_8g079590 46.667 75 39 1 30 104 3 76 4.10e-16 73.9
MsG0380015818.01.T01 MTR_8g074940 35.644 101 65 0 81 181 84 184 5.38e-16 74.3
MsG0380015818.01.T01 MTR_2g076890 45.946 74 39 1 31 104 51 123 3.02e-15 71.2
MsG0380015818.01.T01 MTR_4g079520 33.333 93 62 0 82 174 1 93 4.30e-15 69.3
MsG0380015818.01.T01 MTR_3g068165 31.624 117 58 2 58 174 6 100 8.18e-15 68.9
MsG0380015818.01.T01 MTR_3g464640 35.165 91 58 1 47 137 37 126 9.92e-15 70.1
MsG0380015818.01.T01 MTR_3g017430 46.774 62 32 1 39 100 7 67 2.92e-14 67.4
MsG0380015818.01.T01 MTR_4g054990 34.286 105 69 0 52 156 36 140 3.38e-14 68.6
MsG0380015818.01.T01 MTR_4g122170 37.234 94 58 1 30 123 8 100 5.49e-14 68.6
MsG0380015818.01.T01 MTR_5g012450 28.682 129 86 2 49 175 57 181 2.25e-13 67.0
MsG0380015818.01.T01 MTR_4g051010 42.391 92 52 1 30 121 158 248 3.75e-13 67.4
MsG0380015818.01.T01 MTR_0181s0040 42.857 63 36 0 54 116 109 171 1.07e-12 64.7
MsG0380015818.01.T01 MTR_3g069400 42.029 69 40 0 64 132 20 88 3.43e-12 61.2
MsG0380015818.01.T01 MTR_8g027695 65.789 38 13 0 138 175 3 40 3.73e-12 60.8
MsG0380015818.01.T01 MTR_5g048020 32.479 117 77 2 47 162 59 174 9.82e-12 62.4
MsG0380015818.01.T01 MTR_5g023990 49.123 57 29 0 68 124 249 305 1.13e-11 63.9
MsG0380015818.01.T01 MTR_4g081960 29.193 161 111 3 37 197 1 158 1.31e-11 63.2
MsG0380015818.01.T01 MTR_1g072480 39.130 69 42 0 80 148 39 107 1.41e-11 62.4
MsG0380015818.01.T01 MTR_5g007390 32.710 107 71 1 61 166 2 108 3.63e-11 59.3
MsG0380015818.01.T01 MTR_1g080940 33.000 100 59 2 52 151 27 118 4.48e-11 58.9
MsG0380015818.01.T01 MTR_7g018600 35.294 85 55 0 91 175 48 132 5.26e-11 59.3
MsG0380015818.01.T01 MTR_8g021340 40.476 84 37 3 21 100 48 122 9.21e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 75 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTACAATTTGGGTAATT+TGG 0.143029 3:-75530592 MsG0380015818.01.T01:CDS
CAATTTGGTTTGCTACAATT+TGG 0.158522 3:-75530601 MsG0380015818.01.T01:CDS
TATTCTGTTTCATTTATATT+TGG 0.190193 3:-75524618 MsG0380015818.01.T01:three_prime_UTR
ATTTATATTGGAGGACAATT+TGG 0.202085 3:-75530616 MsG0380015818.01.T01:CDS
TTTCATTTATATTTGGTATT+GGG 0.244519 3:-75524611 MsG0380015818.01.T01:three_prime_UTR
CAGAAGTAGAGACCGTATTT+TGG 0.263649 3:+75530546 None:intergenic
GTTTCATTTATATTTGGTAT+TGG 0.268290 3:-75524612 MsG0380015818.01.T01:three_prime_UTR
ATGAGCTTTGGTCCAAAGTT+TGG 0.275360 3:-75530730 MsG0380015818.01.T01:CDS
CTCGAGTTTCTCATTTATAT+TGG 0.280278 3:-75530628 MsG0380015818.01.T01:CDS
TTAAACTAAATTCGTTTCTC+TGG 0.316576 3:-75530505 MsG0380015818.01.T01:CDS
CTCAACAATGGGAGGATGAT+TGG 0.329365 3:-75524997 MsG0380015818.01.T01:CDS
AATTTGGTTTGCTACAATTT+GGG 0.351337 3:-75530600 MsG0380015818.01.T01:CDS
AAACAAATGTGATGTTGTTT+CGG 0.362089 3:+75530772 None:intergenic
TTGGCATCTAGCTTTATGTT+TGG 0.368291 3:-75524657 MsG0380015818.01.T01:three_prime_UTR
GCGATACTTTCTATGAGCTT+TGG 0.379019 3:-75530742 MsG0380015818.01.T01:CDS
TGTGATTCTATATGATTAGT+TGG 0.393123 3:-75524676 MsG0380015818.01.T01:three_prime_UTR
ATTTATATTTGGTATTGGGT+TGG 0.401822 3:-75524607 MsG0380015818.01.T01:three_prime_UTR
ACCTAACCAGTTCCAAACTT+TGG 0.406053 3:+75530718 None:intergenic
AAATGTTGTCGAAGATCAAC+AGG 0.423545 3:+75530680 None:intergenic
CCAAGGGCAGCGTGTGGTTG+TGG 0.423743 3:-75534303 MsG0380015818.01.T01:CDS
CCACAACCACACGCTGCCCT+TGG 0.428576 3:+75534303 None:intergenic
CGTTGATCACGGTGGTTATC+CGG 0.431081 3:-75534330 MsG0380015818.01.T01:CDS
TAAACTATGCCTTGTTATGA+AGG 0.436496 3:-75524797 MsG0380015818.01.T01:three_prime_UTR
TCCAAAGTTTGGAACTGGTT+AGG 0.438552 3:-75530719 MsG0380015818.01.T01:CDS
TTTGGTCCAAAGTTTGGAAC+TGG 0.439031 3:-75530724 MsG0380015818.01.T01:CDS
TCAACAATGGGAGGATGATT+GGG 0.443446 3:-75524996 MsG0380015818.01.T01:CDS
ATTTCTCTGTTCAGCTGAGA+AGG 0.461195 3:-75524952 MsG0380015818.01.T01:CDS
TACAATTTGGGTAATTTGGA+AGG 0.464529 3:-75530588 MsG0380015818.01.T01:CDS
ACACGCTGCCCTTGGATCGC+CGG 0.480868 3:+75534311 None:intergenic
TTTGGGTAATTTGGAAGGAA+AGG 0.482676 3:-75530583 MsG0380015818.01.T01:CDS
GGTGGACAGTGGTGGTCAAC+TGG 0.483196 3:-75534363 MsG0380015818.01.T01:CDS
CAACCGTATATTCCAAAATA+CGG 0.486843 3:-75530558 MsG0380015818.01.T01:CDS
GGCAGCGTGTGGTTGTGGTC+CGG 0.493261 3:-75534298 MsG0380015818.01.T01:intron
TGTTCAGCTGAGAAGGGAGT+TGG 0.494913 3:-75524945 MsG0380015818.01.T01:CDS
ATCAGCATAGCTAAAACAAA+AGG 0.495403 3:+75530463 None:intergenic
GAAAGAAGTAACTCAACAAT+GGG 0.498445 3:-75525008 MsG0380015818.01.T01:CDS
GAGTTTCTCATTTATATTGG+AGG 0.501810 3:-75530625 MsG0380015818.01.T01:CDS
GAAGAGTTTGAAATCAATGA+AGG 0.502774 3:-75526086 MsG0380015818.01.T01:intron
GGTGGTTATCCGGCGATCCA+AGG 0.519027 3:-75534320 MsG0380015818.01.T01:CDS
TTGCAGTTTACTGTGATGGA+GGG 0.519304 3:-75530656 MsG0380015818.01.T01:CDS
TCTCTGGATTAAAGCAAAGC+AGG 0.531231 3:-75530489 MsG0380015818.01.T01:CDS
GAGTGGGATGACATGGAGGA+AGG 0.532354 3:-75525031 MsG0380015818.01.T01:CDS
GCTACCTCCGGCGTTGATCA+CGG 0.533576 3:-75534341 MsG0380015818.01.T01:CDS
GATATCATGTGTGGAGCAGC+TGG 0.538900 3:-75530806 MsG0380015818.01.T01:CDS
TTTGCAGTTTACTGTGATGG+AGG 0.552943 3:-75530657 MsG0380015818.01.T01:CDS
GGTGGTCAACTGGCTACCTC+CGG 0.553511 3:-75534353 MsG0380015818.01.T01:CDS
TTTCTCTGTTCAGCTGAGAA+GGG 0.558420 3:-75524951 MsG0380015818.01.T01:CDS
GTGGTTATCCGGCGATCCAA+GGG 0.558640 3:-75534319 MsG0380015818.01.T01:CDS
AGCCTTTGCTTCAGTCGCCA+TGG 0.560336 3:+75526157 None:intergenic
GGTATCTGAGACTTTGAGCT+CGG 0.562408 3:-75524845 MsG0380015818.01.T01:three_prime_UTR
GGAAAGAAGTAACTCAACAA+TGG 0.565472 3:-75525009 MsG0380015818.01.T01:CDS
AACGTTAATGATATCATGTG+TGG 0.570619 3:-75530815 MsG0380015818.01.T01:CDS
ATCCATGGCGACTGAAGCAA+AGG 0.576258 3:-75526159 MsG0380015818.01.T01:CDS
TTAAATAATATGGTGGACAG+TGG 0.576677 3:-75534374 None:intergenic
ACTTGCAGAGTGGGATGACA+TGG 0.578383 3:-75525038 MsG0380015818.01.T01:intron
CGTGCTAAATTATCTTTCGT+CGG 0.590291 3:+75530851 None:intergenic
AGTGGGATGACATGGAGGAA+GGG 0.591985 3:-75525030 MsG0380015818.01.T01:CDS
TGCAGATTCAGATTTATCCA+TGG 0.592856 3:-75526174 MsG0380015818.01.T01:intron
ATAAGAATTAAACCACCTGC+TGG 0.593819 3:-75524910 MsG0380015818.01.T01:exon
GAAACATTTCCTTCATAACA+AGG 0.593847 3:+75524788 None:intergenic
TGTGTAATGAGTTACAACTT+AGG 0.596314 3:-75524866 MsG0380015818.01.T01:three_prime_UTR
CATATAGAATCACAGAACTC+AGG 0.596950 3:+75524685 None:intergenic
TGAAGCAAAGGCTGTGACCG+AGG 0.600680 3:-75526147 MsG0380015818.01.T01:CDS
AAAATTCCCATACATAAAAG+CGG 0.607102 3:+75530428 None:intergenic
TGTTTCTAAAACAGCACACA+AGG 0.611866 3:-75524771 MsG0380015818.01.T01:three_prime_UTR
AATAATATGGTGGACAGTGG+TGG 0.613754 3:-75534371 None:intergenic
GGCGATCCAAGGGCAGCGTG+TGG 0.616362 3:-75534309 MsG0380015818.01.T01:CDS
TAGATCGATCTTGACATCCT+CGG 0.618819 3:+75526130 None:intergenic
AGAAGTAACTCAACAATGGG+AGG 0.631574 3:-75525005 MsG0380015818.01.T01:CDS
ATAACCACCGTGATCAACGC+CGG 0.640291 3:+75534334 None:intergenic
TGCAGAGTGGGATGACATGG+AGG 0.657206 3:-75525035 MsG0380015818.01.T01:intron
CAATATAAATGAGAAACTCG+AGG 0.682195 3:+75530629 None:intergenic
ACCACCGTGATCAACGCCGG+AGG 0.701348 3:+75534337 None:intergenic
AAAGATAATTTAGCACGACG+TGG 0.768877 3:-75530845 MsG0380015818.01.T01:CDS
ACCTCCGGCGTTGATCACGG+TGG 0.774533 3:-75534338 MsG0380015818.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAAAATAAAATTAA+AGG - Chr3:75527020-75527039 MsG0380015818.01.T01:intron 0.0%
!! AAAAAAAAAAGATAATTCAA+TGG - Chr3:75524925-75524944 MsG0380015818.01.T01:CDS 10.0%
!! AAAAAATTAAGAAAAGATAA+AGG + Chr3:75532031-75532050 None:intergenic 10.0%
!! AAAAATTAAGAAAAGATAAA+GGG + Chr3:75532030-75532049 None:intergenic 10.0%
!! ATAAAATTAAAGGTTAAAAA+TGG - Chr3:75527030-75527049 MsG0380015818.01.T01:intron 10.0%
!! ATTCTTAGTTAAAATATTTA+TGG + Chr3:75526703-75526722 None:intergenic 10.0%
!! GTATATAAAAAAAAAAGAAA+AGG + Chr3:75532241-75532260 None:intergenic 10.0%
!! TAATATGTATAAATATTTAG+AGG + Chr3:75529284-75529303 None:intergenic 10.0%
!! TTCTTAGTTAAAATATTTAT+GGG + Chr3:75526702-75526721 None:intergenic 10.0%
!!! AAGGTTTTTTTTTTTTTAAT+GGG + Chr3:75531991-75532010 None:intergenic 10.0%
!!! AATTTCATTTTTTTTTTGTT+AGG - Chr3:75531691-75531710 MsG0380015818.01.T01:intron 10.0%
!!! ATTTCATTTTTTTTTTGTTA+GGG - Chr3:75531692-75531711 MsG0380015818.01.T01:intron 10.0%
!!! TAAGGTTTTTTTTTTTTTAA+TGG + Chr3:75531992-75532011 None:intergenic 10.0%
!!! TATAAATTATGTTATTTTGT+TGG - Chr3:75531460-75531479 MsG0380015818.01.T01:intron 10.0%
!!! TGTATATCTATATTTTTTTA+TGG - Chr3:75526819-75526838 MsG0380015818.01.T01:intron 10.0%
!!! TTATTTCTTTTGATTTATAT+TGG - Chr3:75526768-75526787 MsG0380015818.01.T01:intron 10.0%
!!! TTTTTTATATAAGTAAGTAA+TGG - Chr3:75529556-75529575 MsG0380015818.01.T01:intron 10.0%
!!! TTTTTTTTTAAAAAGTCAAA+TGG + Chr3:75524912-75524931 None:intergenic 10.0%
!! AAAGAAAATAGAAACAAAAT+AGG + Chr3:75531768-75531787 None:intergenic 15.0%
!! AAATAAAATATGTTATCCTT+AGG - Chr3:75530005-75530024 MsG0380015818.01.T01:intron 15.0%
!! AATTATTAAACTCAAGAATT+TGG - Chr3:75531821-75531840 MsG0380015818.01.T01:intron 15.0%
!! ATAAAACTAAAATAAACTAG+AGG - Chr3:75529463-75529482 MsG0380015818.01.T01:intron 15.0%
!! ATATTATATACCAAATACAT+CGG - Chr3:75529810-75529829 MsG0380015818.01.T01:intron 15.0%
!! ATGATTTAATATTATTGTCA+AGG - Chr3:75531204-75531223 MsG0380015818.01.T01:intron 15.0%
!! ATGTATTTGGTATATAATAT+AGG + Chr3:75529810-75529829 None:intergenic 15.0%
!! CAAAAAAATACAATAATCAT+AGG - Chr3:75532428-75532447 MsG0380015818.01.T01:intron 15.0%
!! GTAAAATATGAAAAGTTTAA+TGG - Chr3:75530031-75530050 MsG0380015818.01.T01:intron 15.0%
!! TATTCTGTTTCATTTATATT+TGG - Chr3:75534343-75534362 MsG0380015818.01.T01:CDS 15.0%
!! TTAACAAATTATTTGTTTGA+TGG - Chr3:75525016-75525035 MsG0380015818.01.T01:CDS 15.0%
!! TTATGAGTAATATTTATATC+AGG - Chr3:75530732-75530751 MsG0380015818.01.T01:CDS 15.0%
!! TTTCATTTATATTTGGTATT+GGG - Chr3:75534350-75534369 MsG0380015818.01.T01:CDS 15.0%
!!! AAAATAGTTTGTTTGATTAA+TGG - Chr3:75530525-75530544 MsG0380015818.01.T01:CDS 15.0%
!!! AGTTGAAATTTTTGAAATTT+AGG + Chr3:75529520-75529539 None:intergenic 15.0%
!!! ATACTTTTTAAGTAAGTAAT+TGG + Chr3:75532383-75532402 None:intergenic 15.0%
!!! ATTATTGTATTTTTTTGTAG+TGG + Chr3:75532425-75532444 None:intergenic 15.0%
!!! CTAGATTTGATTTTTTTATA+CGG + Chr3:75526885-75526904 None:intergenic 15.0%
!!! CTTTTCTTAATTTTTTTGTT+GGG - Chr3:75532035-75532054 MsG0380015818.01.T01:intron 15.0%
!!! TAAGCAAAAAACTATTTTTT+AGG + Chr3:75529848-75529867 None:intergenic 15.0%
!!! TATTTTCTATAGAAATTGAA+GGG + Chr3:75532267-75532286 None:intergenic 15.0%
!!! TCAAACAAATAATTTGTTAA+TGG + Chr3:75525016-75525035 None:intergenic 15.0%
!!! TCTTTTCTTAATTTTTTTGT+TGG - Chr3:75532034-75532053 MsG0380015818.01.T01:intron 15.0%
!!! TTATTTTCTATAGAAATTGA+AGG + Chr3:75532268-75532287 None:intergenic 15.0%
!!! TTCAATGGATTTTTAAAATA+TGG - Chr3:75524940-75524959 MsG0380015818.01.T01:CDS 15.0%
!!! TTTCATTTTTTTTTTGTTAG+GGG - Chr3:75531693-75531712 MsG0380015818.01.T01:intron 15.0%
!!! TTTTTAATGGGAAAAATTTA+TGG + Chr3:75531979-75531998 None:intergenic 15.0%
!!! TTTTTATTTTTTTTGAAGAG+TGG - Chr3:75525129-75525148 MsG0380015818.01.T01:intron 15.0%
!!! TTTTTCAATTCCTAATTTAA+TGG - Chr3:75527553-75527572 MsG0380015818.01.T01:intron 15.0%
!!! TTTTTTCTTCCTTATATATT+GGG + Chr3:75525761-75525780 None:intergenic 15.0%
!!! TTTTTTTCTTCCTTATATAT+TGG + Chr3:75525762-75525781 None:intergenic 15.0%
!! AAAGGAATTATTACCAAAAA+AGG - Chr3:75532102-75532121 MsG0380015818.01.T01:intron 20.0%
!! AAGTTTCAAATTACATGATT+GGG + Chr3:75533409-75533428 None:intergenic 20.0%
!! AATTGTTTCACGATATATAT+TGG + Chr3:75528854-75528873 None:intergenic 20.0%
!! ACATGATCTTTATAACATAA+AGG - Chr3:75531097-75531116 MsG0380015818.01.T01:intron 20.0%
!! ACTGAAAGTAATAGAAATAA+TGG + Chr3:75527618-75527637 None:intergenic 20.0%
!! ATAAAAAATGTTTCCATTCT+TGG + Chr3:75529544-75529563 None:intergenic 20.0%
!! ATAAAGTTCAATATAAGCAT+AGG - Chr3:75531056-75531075 MsG0380015818.01.T01:intron 20.0%
!! ATCTTTATAACATAAAGGTT+TGG - Chr3:75531102-75531121 MsG0380015818.01.T01:intron 20.0%
!! ATGAAAATTAAAAGAACACA+TGG - Chr3:75525883-75525902 MsG0380015818.01.T01:intron 20.0%
!! ATGATCCATAAAAATAAAGT+TGG - Chr3:75530855-75530874 MsG0380015818.01.T01:CDS 20.0%
!! ATTTAGTACATGAATAATGA+AGG + Chr3:75528883-75528902 None:intergenic 20.0%
!! CTTATACATATTGTACTTTA+TGG + Chr3:75531396-75531415 None:intergenic 20.0%
!! GTTTCATTTATATTTGGTAT+TGG - Chr3:75534349-75534368 MsG0380015818.01.T01:CDS 20.0%
!! TAAAGTTCAATATAAGCATA+GGG - Chr3:75531057-75531076 MsG0380015818.01.T01:intron 20.0%
!! TAAGTTTCAAATTACATGAT+TGG + Chr3:75533410-75533429 None:intergenic 20.0%
!! TACAAAATACAAATGCATAT+AGG + Chr3:75525383-75525402 None:intergenic 20.0%
!! TATCACATTGTATAATAAAC+AGG + Chr3:75525662-75525681 None:intergenic 20.0%
!! TGAAAATTAAAAGAACACAT+GGG - Chr3:75525884-75525903 MsG0380015818.01.T01:intron 20.0%
!! TGATCCATAAAAATAAAGTT+GGG - Chr3:75530856-75530875 MsG0380015818.01.T01:CDS 20.0%
!!! AAAAAACATGCATTTTTCTT+TGG - Chr3:75525776-75525795 MsG0380015818.01.T01:intron 20.0%
!!! AAAAACATGCATTTTTCTTT+GGG - Chr3:75525777-75525796 MsG0380015818.01.T01:intron 20.0%
!!! AAAAACCCTAATTTTGATAA+AGG + Chr3:75532720-75532739 None:intergenic 20.0%
!!! AAAACCCTAATTTTGATAAA+GGG + Chr3:75532719-75532738 None:intergenic 20.0%
!!! AAAATTGCATTGTTTTTGTT+AGG + Chr3:75531537-75531556 None:intergenic 20.0%
!!! AAAGGTATCAATTTTTGTTT+TGG + Chr3:75529230-75529249 None:intergenic 20.0%
!!! AAATTGCATTGTTTTTGTTA+GGG + Chr3:75531536-75531555 None:intergenic 20.0%
!!! AAGCTTATTATTTCTTTTAC+TGG - Chr3:75525418-75525437 MsG0380015818.01.T01:intron 20.0%
!!! AATTTGTTTTCTGTTTTTGT+TGG - Chr3:75528561-75528580 MsG0380015818.01.T01:intron 20.0%
!!! CAAATAATTTGTTAATGGAT+TGG + Chr3:75525011-75525030 None:intergenic 20.0%
!!! CATGTACTAAATATGATTTT+TGG - Chr3:75528891-75528910 MsG0380015818.01.T01:intron 20.0%
!!! CTGATTTAAATTAAAGTGTT+TGG - Chr3:75526571-75526590 MsG0380015818.01.T01:intron 20.0%
!!! GATTTTTAAAATATGGTAGA+TGG - Chr3:75524947-75524966 MsG0380015818.01.T01:CDS 20.0%
!!! GTAGTGCTTAATATTTTTTA+CGG + Chr3:75526975-75526994 None:intergenic 20.0%
!!! GTCTTATTATCTTTCTATTA+TGG + Chr3:75526213-75526232 None:intergenic 20.0%
!!! TATTACTTTGAGAATATCTT+AGG + Chr3:75530802-75530821 None:intergenic 20.0%
!!! TGTGAAGAACATATTTTTTA+AGG - Chr3:75525836-75525855 MsG0380015818.01.T01:intron 20.0%
!!! TTCATCTTTTAAGATAAAAG+TGG + Chr3:75529197-75529216 None:intergenic 20.0%
!!! TTTATTTTTATGGATCATAG+TGG + Chr3:75530853-75530872 None:intergenic 20.0%
!!! TTTCATATTTTACAATCCTA+AGG + Chr3:75530024-75530043 None:intergenic 20.0%
!!! TTTTTGCTTATAAATATGAC+CGG - Chr3:75529858-75529877 MsG0380015818.01.T01:intron 20.0%
!!! TTTTTTGTTTTGTTTTGAGA+CGG + Chr3:75525464-75525483 None:intergenic 20.0%
! AAAAAATATTAAGCACTACG+TGG - Chr3:75526976-75526995 MsG0380015818.01.T01:intron 25.0%
! AAAAATATTAAGCACTACGT+GGG - Chr3:75526977-75526996 MsG0380015818.01.T01:intron 25.0%
! AAAAATTATAGACGTCACAT+TGG - Chr3:75525306-75525325 MsG0380015818.01.T01:intron 25.0%
! AAAATTCCCATACATAAAAG+CGG + Chr3:75528536-75528555 None:intergenic 25.0%
! AAAATTTCAACTTCCAAGAA+TGG - Chr3:75529528-75529547 MsG0380015818.01.T01:intron 25.0%
! AAACTAAAATAAACTAGAGG+AGG - Chr3:75529466-75529485 MsG0380015818.01.T01:intron 25.0%
! AACATCACTGAAAATTTCTT+AGG + Chr3:75532979-75532998 None:intergenic 25.0%
! AACTAAAATAAACTAGAGGA+GGG - Chr3:75529467-75529486 MsG0380015818.01.T01:intron 25.0%
! AATTAAGCTAAAAAGCTACT+TGG - Chr3:75527080-75527099 MsG0380015818.01.T01:intron 25.0%
! AATTAGTGTAGTATTACCAT+CGG + Chr3:75530673-75530692 None:intergenic 25.0%
! AATTTCAATCATGTAACTGT+TGG + Chr3:75526356-75526375 None:intergenic 25.0%
! ATATTTAGTCAAGCATGAAA+CGG + Chr3:75527585-75527604 None:intergenic 25.0%
! ATCAAATAGAAACCAAAGAA+AGG - Chr3:75526937-75526956 MsG0380015818.01.T01:intron 25.0%
! ATTCCCCTTTATCAAAATTA+GGG - Chr3:75532712-75532731 MsG0380015818.01.T01:intron 25.0%
! ATTGGCATTTGTATGTTAAT+TGG - Chr3:75533783-75533802 MsG0380015818.01.T01:intron 25.0%
! ATTTATATTGGAGGACAATT+TGG - Chr3:75528345-75528364 MsG0380015818.01.T01:intron 25.0%
! ATTTCAATCATGTAACTGTT+GGG + Chr3:75526355-75526374 None:intergenic 25.0%
! ATTTCATACACGAAATAAAG+TGG + Chr3:75533450-75533469 None:intergenic 25.0%
! CAAATTATTTGTTTGATGGA+TGG - Chr3:75525020-75525039 MsG0380015818.01.T01:CDS 25.0%
! CAATACTAGTGTATAAATAG+TGG - Chr3:75525498-75525517 MsG0380015818.01.T01:intron 25.0%
! CATCCATAATGTTAAATTGA+TGG - Chr3:75524978-75524997 MsG0380015818.01.T01:CDS 25.0%
! CTTATACATAAGCACTTATT+TGG - Chr3:75533330-75533349 MsG0380015818.01.T01:intron 25.0%
! GATCCATCAATTTAACATTA+TGG + Chr3:75524984-75525003 None:intergenic 25.0%
! TAATTAACATATTCCGTCAA+AGG - Chr3:75527414-75527433 MsG0380015818.01.T01:intron 25.0%
! TATTCCCCTTTATCAAAATT+AGG - Chr3:75532711-75532730 MsG0380015818.01.T01:intron 25.0%
! TGATGCATTTAAGTGAAAAA+TGG - Chr3:75531366-75531385 MsG0380015818.01.T01:intron 25.0%
! TGGTAATACTACACTAATTA+TGG - Chr3:75530674-75530693 MsG0380015818.01.T01:CDS 25.0%
! TGGTTAAGCATAACATAAAA+AGG - Chr3:75532084-75532103 MsG0380015818.01.T01:intron 25.0%
! TGTGATTCTATATGATTAGT+TGG - Chr3:75534285-75534304 MsG0380015818.01.T01:intron 25.0%
! TTAAACTAAATTCGTTTCTC+TGG - Chr3:75528456-75528475 MsG0380015818.01.T01:intron 25.0%
! TTATAGGTGATAATTAACGT+CGG + Chr3:75524750-75524769 None:intergenic 25.0%
!! AAAACATGCATTTTTCTTTG+GGG - Chr3:75525778-75525797 MsG0380015818.01.T01:intron 25.0%
!! AAACAAATGTGATGTTGTTT+CGG + Chr3:75528192-75528211 None:intergenic 25.0%
!! AAGATTGATGTATACTTTTG+AGG - Chr3:75530402-75530421 MsG0380015818.01.T01:intron 25.0%
!! ACGGTTATTTCCATTAAATT+AGG + Chr3:75527566-75527585 None:intergenic 25.0%
!! AGTTGTTTCATAAACTATCA+TGG + Chr3:75533256-75533275 None:intergenic 25.0%
!! ATAGAAATAATGGAGAGTAA+AGG + Chr3:75527608-75527627 None:intergenic 25.0%
!! ATTTATATTTGGTATTGGGT+TGG - Chr3:75534354-75534373 MsG0380015818.01.T01:CDS 25.0%
!! GTCAAGTTTTACTATAAAAC+TGG - Chr3:75530615-75530634 MsG0380015818.01.T01:CDS 25.0%
!! TCTTCTCTTCTTTTCAATTT+TGG - Chr3:75527762-75527781 MsG0380015818.01.T01:intron 25.0%
!! TGTTAATCCTATTTCTCATT+AGG - Chr3:75533697-75533716 MsG0380015818.01.T01:intron 25.0%
!! TTGTAATGTTCCACTATTTT+TGG - Chr3:75529055-75529074 MsG0380015818.01.T01:intron 25.0%
!! TTTTTCCATCCCAATATATA+AGG - Chr3:75525749-75525768 MsG0380015818.01.T01:intron 25.0%
!!! AAACCCTAATTTTGATAAAG+GGG + Chr3:75532718-75532737 None:intergenic 25.0%
!!! AACGATTTTAAAATCTGTCT+TGG - Chr3:75531933-75531952 MsG0380015818.01.T01:intron 25.0%
!!! AACTTTTTTGCAAAGATAAG+GGG - Chr3:75531623-75531642 MsG0380015818.01.T01:intron 25.0%
!!! AATTATCTATAAGGAGTATC+AGG + Chr3:75527260-75527279 None:intergenic 25.0%
!!! AATTGCATTGTTTTTGTTAG+GGG + Chr3:75531535-75531554 None:intergenic 25.0%
!!! AATTTGGTTTGCTACAATTT+GGG - Chr3:75528361-75528380 MsG0380015818.01.T01:intron 25.0%
!!! AATTTTGATAAAGGGGAATA+GGG + Chr3:75532711-75532730 None:intergenic 25.0%
!!! AATTTTTTCTCACAATGCAA+TGG + Chr3:75525994-75526013 None:intergenic 25.0%
!!! ACGACGTTGTTAAATTTTTT+GGG - Chr3:75525236-75525255 MsG0380015818.01.T01:intron 25.0%
!!! ATTATCTATAAGGAGTATCA+GGG + Chr3:75527259-75527278 None:intergenic 25.0%
!!! ATTTTTGGATGGAATAAATG+GGG + Chr3:75529654-75529673 None:intergenic 25.0%
!!! ATTTTTTCTCACAATGCAAT+GGG + Chr3:75525993-75526012 None:intergenic 25.0%
!!! CAACTTTTTTGCAAAGATAA+GGG - Chr3:75531622-75531641 MsG0380015818.01.T01:intron 25.0%
!!! CATTTTTGGATGGAATAAAT+GGG + Chr3:75529655-75529674 None:intergenic 25.0%
!!! CTTTTTAGCTTAATTATAGC+TGG + Chr3:75527075-75527094 None:intergenic 25.0%
!!! GATGGATTTGATGAATTTTA+CGG - Chr3:75525038-75525057 MsG0380015818.01.T01:intron 25.0%
!!! TAATTTTGATAAAGGGGAAT+AGG + Chr3:75532712-75532731 None:intergenic 25.0%
!!! TACGACGTTGTTAAATTTTT+TGG - Chr3:75525235-75525254 MsG0380015818.01.T01:intron 25.0%
!!! TCATTTTTGGATGGAATAAA+TGG + Chr3:75529656-75529675 None:intergenic 25.0%
!!! TGAATCTCATTTAGTTTGAT+TGG - Chr3:75533765-75533784 MsG0380015818.01.T01:intron 25.0%
!!! TGATTTTAACTTTCTGTGTT+TGG - Chr3:75526442-75526461 MsG0380015818.01.T01:intron 25.0%
!!! TGATTTTTTTTTGTTCCTGT+TGG + Chr3:75526921-75526940 None:intergenic 25.0%
!!! TGTAATGTTCCACTATTTTT+GGG - Chr3:75529056-75529075 MsG0380015818.01.T01:intron 25.0%
!!! TTTTTGAAATTTAGGCTCTA+TGG + Chr3:75529512-75529531 None:intergenic 25.0%
AAAAAAAAAACCGTGCTTTC+GGG + Chr3:75525734-75525753 None:intergenic 30.0%
AAAATTCACCTTTGTGTTGA+GGG + Chr3:75530216-75530235 None:intergenic 30.0%
AAAGAAAAGGAAATGCTAAC+CGG + Chr3:75532228-75532247 None:intergenic 30.0%
AAATTTCATCTAAGTCACTC+GGG + Chr3:75530965-75530984 None:intergenic 30.0%
AACGTTAATGATATCATGTG+TGG - Chr3:75528146-75528165 MsG0380015818.01.T01:intron 30.0%
AAGCATAGTTGGGAAAATTA+GGG + Chr3:75531564-75531583 None:intergenic 30.0%
AATGGGAAAAATTTATGGTG+AGG + Chr3:75531974-75531993 None:intergenic 30.0%
AATTAAAAGAACACATGGGA+TGG - Chr3:75525888-75525907 MsG0380015818.01.T01:intron 30.0%
AATTTAGTTGGAGAATACCT+TGG + Chr3:75528821-75528840 None:intergenic 30.0%
ACACTTTCCAAATCATATTG+AGG - Chr3:75530937-75530956 MsG0380015818.01.T01:intron 30.0%
ACAGCACTTATATACTAGAT+AGG + Chr3:75533148-75533167 None:intergenic 30.0%
ACATGTATTCATTCTAGTGT+AGG + Chr3:75527653-75527672 None:intergenic 30.0%
ACGAAGCCAAAAATGAAAAA+TGG + Chr3:75530075-75530094 None:intergenic 30.0%
ACTGGTTAAGGATATGAAAA+AGG + Chr3:75532193-75532212 None:intergenic 30.0%
AGAACAAATGATTGCAATGA+AGG + Chr3:75532656-75532675 None:intergenic 30.0%
AGAACAATATTGAAACCAAC+AGG - Chr3:75526903-75526922 MsG0380015818.01.T01:intron 30.0%
AGATCTTAGTAACGACATAT+TGG - Chr3:75530154-75530173 MsG0380015818.01.T01:intron 30.0%
AGTGGTGAATCAATAGTTTA+TGG - Chr3:75530347-75530366 MsG0380015818.01.T01:intron 30.0%
ATAAAATCCATCACAAACAC+GGG + Chr3:75525702-75525721 None:intergenic 30.0%
ATATGTAGGAACAATGACAA+TGG - Chr3:75530994-75531013 MsG0380015818.01.T01:intron 30.0%
ATATTTCACAAATACTCCTC+TGG - Chr3:75529727-75529746 MsG0380015818.01.T01:intron 30.0%
ATCAGCATAGCTAAAACAAA+AGG + Chr3:75528501-75528520 None:intergenic 30.0%
ATTAAAAGAACACATGGGAT+GGG - Chr3:75525889-75525908 MsG0380015818.01.T01:intron 30.0%
ATTATTGTCCCTTCAAGTAT+GGG - Chr3:75529327-75529346 MsG0380015818.01.T01:intron 30.0%
CAAATTACATGATTGGGTTA+TGG + Chr3:75533403-75533422 None:intergenic 30.0%
CAAATTTCATCTAAGTCACT+CGG + Chr3:75530966-75530985 None:intergenic 30.0%
CAACCGTATATTCCAAAATA+CGG - Chr3:75528403-75528422 MsG0380015818.01.T01:intron 30.0%
CAATATAAATGAGAAACTCG+AGG + Chr3:75528335-75528354 None:intergenic 30.0%
CACTTTCCAAATCATATTGA+GGG - Chr3:75530938-75530957 MsG0380015818.01.T01:intron 30.0%
CATTGAATATCCGATGTATT+TGG + Chr3:75529823-75529842 None:intergenic 30.0%
CCCTAAACATAGCAAAAATA+GGG - Chr3:75531662-75531681 MsG0380015818.01.T01:intron 30.0%
CCTAAACATAGCAAAAATAG+GGG - Chr3:75531663-75531682 MsG0380015818.01.T01:intron 30.0%
CTAAACATAGCAAAAATAGG+GGG - Chr3:75531664-75531683 MsG0380015818.01.T01:intron 30.0%
CTCGAGTTTCTCATTTATAT+TGG - Chr3:75528333-75528352 MsG0380015818.01.T01:intron 30.0%
CTCTAATTTGAGAGATACTT+AGG + Chr3:75527236-75527255 None:intergenic 30.0%
CTTGTATTCATCGTATCTAA+AGG + Chr3:75531434-75531453 None:intergenic 30.0%
GAAAAAAAAAACCGTGCTTT+CGG + Chr3:75525735-75525754 None:intergenic 30.0%
GAAACATTTCCTTCATAACA+AGG + Chr3:75534176-75534195 None:intergenic 30.0%
GAAAGAAGTAACTCAACAAT+GGG - Chr3:75533953-75533972 MsG0380015818.01.T01:intron 30.0%
GAGTATATTTAATAGACCGA+TGG - Chr3:75530654-75530673 MsG0380015818.01.T01:CDS 30.0%
GAGTTTCTCATTTATATTGG+AGG - Chr3:75528336-75528355 MsG0380015818.01.T01:intron 30.0%
GATAAAATCCATCACAAACA+CGG + Chr3:75525703-75525722 None:intergenic 30.0%
GATCTTAGTAACGACATATT+GGG - Chr3:75530155-75530174 MsG0380015818.01.T01:intron 30.0%
GCGCATAAATTTCACAAATT+CGG + Chr3:75532749-75532768 None:intergenic 30.0%
GGGAAATTTATTGACAACTA+AGG + Chr3:75532010-75532029 None:intergenic 30.0%
GTTTAGTGAGTTCAACTTAT+GGG + Chr3:75532350-75532369 None:intergenic 30.0%
TACAATTTGGGTAATTTGGA+AGG - Chr3:75528373-75528392 MsG0380015818.01.T01:intron 30.0%
TAGAAAGAGAGACAATTGAT+AGG - Chr3:75531852-75531871 MsG0380015818.01.T01:intron 30.0%
TAGTACATGAATAATGAAGG+AGG + Chr3:75528880-75528899 None:intergenic 30.0%
TCATTCAATTCAACCAATAC+CGG - Chr3:75532616-75532635 MsG0380015818.01.T01:intron 30.0%
TCCCTAAACATAGCAAAAAT+AGG - Chr3:75531661-75531680 MsG0380015818.01.T01:intron 30.0%
TGTGTAATGAGTTACAACTT+AGG - Chr3:75534095-75534114 MsG0380015818.01.T01:intron 30.0%
TGTTTAGTGAGTTCAACTTA+TGG + Chr3:75532351-75532370 None:intergenic 30.0%
TGTTTCACGATATATATTGG+CGG + Chr3:75528851-75528870 None:intergenic 30.0%
TTAGATACGATGAATACAAG+TGG - Chr3:75531434-75531453 MsG0380015818.01.T01:intron 30.0%
TTCTTCCTTATATATTGGGA+TGG + Chr3:75525757-75525776 None:intergenic 30.0%
TTGATAGAATGAGATGTGTT+TGG + Chr3:75527152-75527171 None:intergenic 30.0%
TTGCAAAAAAGTTGCGATTA+TGG + Chr3:75531616-75531635 None:intergenic 30.0%
TTGCTACAATTTGGGTAATT+TGG - Chr3:75528369-75528388 MsG0380015818.01.T01:intron 30.0%
TTGGCATTCAATTAATTACG+AGG - Chr3:75533105-75533124 MsG0380015818.01.T01:intron 30.0%
TTGTTAATGCTCTTAGAGTT+AGG - Chr3:75531890-75531909 MsG0380015818.01.T01:intron 30.0%
TTTCTTGACGACTTGAAATT+AGG - Chr3:75533825-75533844 MsG0380015818.01.T01:intron 30.0%
! AAAAGCTAGCTTATAGTTGA+TGG - Chr3:75526515-75526534 MsG0380015818.01.T01:intron 30.0%
! AACTTATCGATTATTGACTG+AGG + Chr3:75527983-75528002 None:intergenic 30.0%
! AATAGGCTTAAATGCACTTT+TGG + Chr3:75531751-75531770 None:intergenic 30.0%
! AATTTGTTCCTCGTATATGT+AGG - Chr3:75530980-75530999 MsG0380015818.01.T01:intron 30.0%
! CACTGTGACTTTGTAAATTT+TGG - Chr3:75528601-75528620 MsG0380015818.01.T01:intron 30.0%
! CTTATGGGTGAAATAAGTTT+TGG + Chr3:75532335-75532354 None:intergenic 30.0%
! GAACATTTGTTAGACTGTTT+GGG - Chr3:75533185-75533204 MsG0380015818.01.T01:intron 30.0%
! GAAGAGTTTGAAATCAATGA+AGG - Chr3:75532875-75532894 MsG0380015818.01.T01:intron 30.0%
! GAATTTTACGGTGAATGAAT+TGG - Chr3:75525050-75525069 MsG0380015818.01.T01:intron 30.0%
! GAATTTTCCAACTCATAACA+AGG - Chr3:75530229-75530248 MsG0380015818.01.T01:intron 30.0%
! GTATACATCAATCTTTTGCA+AGG + Chr3:75530397-75530416 None:intergenic 30.0%
! TAAACTATGCCTTGTTATGA+AGG - Chr3:75534164-75534183 MsG0380015818.01.T01:intron 30.0%
! TCTAGTATATAAGTGCTGTT+TGG - Chr3:75533149-75533168 MsG0380015818.01.T01:intron 30.0%
! TCTTTTTGTGTCTAATGTGT+TGG + Chr3:75526314-75526333 None:intergenic 30.0%
! TGAACATTTGTTAGACTGTT+TGG - Chr3:75533184-75533203 MsG0380015818.01.T01:intron 30.0%
! TGTGACTTTGTAAATTTTGG+CGG - Chr3:75528604-75528623 MsG0380015818.01.T01:intron 30.0%
! TTTAAAATCTGTCTTGGACT+TGG - Chr3:75531939-75531958 MsG0380015818.01.T01:intron 30.0%
! TTTAGGGAAATATGCTCTTT+TGG + Chr3:75531649-75531668 None:intergenic 30.0%
!! CAATTTGGTTTGCTACAATT+TGG - Chr3:75528360-75528379 MsG0380015818.01.T01:intron 30.0%
!!! AGACCGTATTTTGGAATATA+CGG + Chr3:75528409-75528428 None:intergenic 30.0%
!!! ATTGCATTGTTTTTGTTAGG+GGG + Chr3:75531534-75531553 None:intergenic 30.0%
!!! ATTTAAACGTCGTCGTTTTT+TGG + Chr3:75532480-75532499 None:intergenic 30.0%
!!! CCCTATTTTTGCTATGTTTA+GGG + Chr3:75531665-75531684 None:intergenic 30.0%
!!! GCAACTTTTTTGCAAAGATA+AGG - Chr3:75531621-75531640 MsG0380015818.01.T01:intron 30.0%
!!! GTAATGTTCCACTATTTTTG+GGG - Chr3:75529057-75529076 MsG0380015818.01.T01:intron 30.0%
!!! TCAAAAGCAGTTTCCTTTTT+TGG + Chr3:75532118-75532137 None:intergenic 30.0%
!!! TGACTGCCATTTTTCATTTT+TGG - Chr3:75530066-75530085 MsG0380015818.01.T01:intron 30.0%
!!! TGCACCCAACTTTATTTTTA+TGG + Chr3:75530863-75530882 None:intergenic 30.0%
!!! TTGTTTTCTGTTTTTGTTGG+CGG - Chr3:75528564-75528583 MsG0380015818.01.T01:intron 30.0%
!!! TTTGTTTTAGCTATGCTGAT+TGG - Chr3:75528501-75528520 MsG0380015818.01.T01:intron 30.0%
!!! TTTTTCATTTTTGGCTTCGT+CGG - Chr3:75530075-75530094 MsG0380015818.01.T01:intron 30.0%
!!! TTTTTTGAAGAGTGGTTACT+TGG - Chr3:75525137-75525156 MsG0380015818.01.T01:intron 30.0%
!!! TTTTTTGCAGTTTACTGTGA+TGG - Chr3:75528301-75528320 MsG0380015818.01.T01:intron 30.0%
AAAGATAATTTAGCACGACG+TGG - Chr3:75528116-75528135 MsG0380015818.01.T01:intron 35.0%
AAATGTTGTCGAAGATCAAC+AGG + Chr3:75528284-75528303 None:intergenic 35.0%
ACATTAGATTGTGAGTGCAA+TGG + Chr3:75533867-75533886 None:intergenic 35.0%
ACCCAATATTGAACTGAACA+AGG - Chr3:75531017-75531036 MsG0380015818.01.T01:intron 35.0%
ACCCTTGTTCAGTTCAATAT+TGG + Chr3:75531022-75531041 None:intergenic 35.0%
AGAATCTTGTGTGCTTGTAA+AGG + Chr3:75532555-75532574 None:intergenic 35.0%
AGCATAGTTGGGAAAATTAG+GGG + Chr3:75531563-75531582 None:intergenic 35.0%
AGTACCCTATTACGTGATAT+TGG - Chr3:75529976-75529995 MsG0380015818.01.T01:intron 35.0%
ATAAGAATTAAACCACCTGC+TGG - Chr3:75534051-75534070 MsG0380015818.01.T01:intron 35.0%
ATACACGAAATAAAGTGGTG+AGG + Chr3:75533445-75533464 None:intergenic 35.0%
ATCAAACAAAAATAGCCAGC+AGG + Chr3:75534069-75534088 None:intergenic 35.0%
ATCTAGTATCATCATGGTTC+AGG + Chr3:75530762-75530781 None:intergenic 35.0%
ATGCACCAATATCACGTAAT+AGG + Chr3:75529984-75530003 None:intergenic 35.0%
ATTAGGCATGAACACTTCTA+GGG - Chr3:75533714-75533733 MsG0380015818.01.T01:intron 35.0%
ATTGAATGAACGATGAACCT+TGG + Chr3:75532605-75532624 None:intergenic 35.0%
ATTGCTACAACGACAAACAT+AGG - Chr3:75531722-75531741 MsG0380015818.01.T01:intron 35.0%
CAAGCATAGTTGGGAAAATT+AGG + Chr3:75531565-75531584 None:intergenic 35.0%
CACACTATCTAGTATCATCA+TGG + Chr3:75530768-75530787 None:intergenic 35.0%
CATAGTGGTTTCAGATAGAA+GGG + Chr3:75530838-75530857 None:intergenic 35.0%
CATATAGAATCACAGAACTC+AGG + Chr3:75534279-75534298 None:intergenic 35.0%
CATTATTGTCCCTTCAAGTA+TGG - Chr3:75529326-75529345 MsG0380015818.01.T01:intron 35.0%
CATTCAATTCAACCAATACC+GGG - Chr3:75532617-75532636 MsG0380015818.01.T01:intron 35.0%
CCCAATATTGAACTGAACAA+GGG - Chr3:75531018-75531037 MsG0380015818.01.T01:intron 35.0%
CCCTTGTTCAGTTCAATATT+GGG + Chr3:75531021-75531040 None:intergenic 35.0%
CGTGCTAAATTATCTTTCGT+CGG + Chr3:75528113-75528132 None:intergenic 35.0%
CTTGCTAGAGAACTTATCAT+GGG - Chr3:75525352-75525371 MsG0380015818.01.T01:intron 35.0%
GAAAATTCACCTTTGTGTTG+AGG + Chr3:75530217-75530236 None:intergenic 35.0%
GATGGAATAAATGGGGTAAA+AGG + Chr3:75529647-75529666 None:intergenic 35.0%
GCATTCAATTAATTACGAGG+AGG - Chr3:75533108-75533127 MsG0380015818.01.T01:intron 35.0%
GCTGCATCATTTATATAAGC+AGG + Chr3:75533552-75533571 None:intergenic 35.0%
GCTTGTAAAGGAAGTAAGAA+AGG + Chr3:75532543-75532562 None:intergenic 35.0%
GGAAAGAAGTAACTCAACAA+TGG - Chr3:75533952-75533971 MsG0380015818.01.T01:intron 35.0%
GTCGTTACTAAGATCTAACA+AGG + Chr3:75530150-75530169 None:intergenic 35.0%
GTTCATGCCTAATGAGAAAT+AGG + Chr3:75533707-75533726 None:intergenic 35.0%
GTTGAAACAAATGAGTATGC+TGG - Chr3:75525272-75525291 MsG0380015818.01.T01:intron 35.0%
TATACTAGCATAACAGCAAG+TGG - Chr3:75530329-75530348 MsG0380015818.01.T01:intron 35.0%
TCATAGTGGTTTCAGATAGA+AGG + Chr3:75530839-75530858 None:intergenic 35.0%
TCATTGTTCCTACATATACG+AGG + Chr3:75530991-75531010 None:intergenic 35.0%
TCTAACAAGGACAAGTCAAA+CGG + Chr3:75530137-75530156 None:intergenic 35.0%
TCTTATGTGCATGATCTTGT+AGG + Chr3:75531239-75531258 None:intergenic 35.0%
TGCACCAATATCACGTAATA+GGG + Chr3:75529983-75530002 None:intergenic 35.0%
TGCAGATTCAGATTTATCCA+TGG - Chr3:75532787-75532806 MsG0380015818.01.T01:intron 35.0%
TGCTTATAAATATGACCGGA+GGG - Chr3:75529862-75529881 MsG0380015818.01.T01:intron 35.0%
TGTATTCATTCTAGTGTAGG+TGG + Chr3:75527650-75527669 None:intergenic 35.0%
TGTGAAATTTATGCGCTGTT+GGG - Chr3:75532753-75532772 MsG0380015818.01.T01:intron 35.0%
TTACATGATTGGGTTATGGT+TGG + Chr3:75533399-75533418 None:intergenic 35.0%
TTATTGTCCCTTCAAGTATG+GGG - Chr3:75529328-75529347 MsG0380015818.01.T01:intron 35.0%
TTCAAGTCGTCAAGAAAAGT+TGG + Chr3:75533822-75533841 None:intergenic 35.0%
TTGCTACAACGACAAACATA+GGG - Chr3:75531723-75531742 MsG0380015818.01.T01:intron 35.0%
TTGCTTATAAATATGACCGG+AGG - Chr3:75529861-75529880 MsG0380015818.01.T01:intron 35.0%
TTGCTTATAAATGTGACCAG+AGG + Chr3:75529746-75529765 None:intergenic 35.0%
TTGTGAAATTTATGCGCTGT+TGG - Chr3:75532752-75532771 MsG0380015818.01.T01:intron 35.0%
TTTGGGTAATTTGGAAGGAA+AGG - Chr3:75528378-75528397 MsG0380015818.01.T01:intron 35.0%
! AAAGCTAGCTTATAGCTTGT+TGG + Chr3:75527194-75527213 None:intergenic 35.0%
! CAGACACACTCAATCATTTT+TGG + Chr3:75529669-75529688 None:intergenic 35.0%
! CATATTTTCATCTCTCGTGT+TGG - Chr3:75525094-75525113 MsG0380015818.01.T01:intron 35.0%
! CGAGTGACAATCAATGTTTT+GGG - Chr3:75530185-75530204 MsG0380015818.01.T01:intron 35.0%
! CTAATTTTCCCAACTATGCT+TGG - Chr3:75531563-75531582 MsG0380015818.01.T01:intron 35.0%
! CTTTTAAGCCCCAAAAATAG+TGG + Chr3:75529068-75529087 None:intergenic 35.0%
! GACTTGAAATTAGGAGGTTT+TGG - Chr3:75533834-75533853 MsG0380015818.01.T01:intron 35.0%
! GTTTGTCGTTGTAGCAATTT+TGG + Chr3:75531720-75531739 None:intergenic 35.0%
! TATACGACCTTGTTATGAGT+TGG + Chr3:75530239-75530258 None:intergenic 35.0%
! TCGAGTGACAATCAATGTTT+TGG - Chr3:75530184-75530203 MsG0380015818.01.T01:intron 35.0%
! TGTTTTACAACTTGCAGAGT+GGG - Chr3:75533914-75533933 MsG0380015818.01.T01:intron 35.0%
! TTTTGTTGGGTCCTGTTAAT+CGG - Chr3:75532048-75532067 MsG0380015818.01.T01:intron 35.0%
!! ACTTCTAGGGCGAAAATTAT+AGG - Chr3:75533727-75533746 MsG0380015818.01.T01:intron 35.0%
!! CACACTCAATCATTTTTGGA+TGG + Chr3:75529665-75529684 None:intergenic 35.0%
!! TATTCATTAGTTTGCTTCCG+TGG - Chr3:75533022-75533041 MsG0380015818.01.T01:intron 35.0%
!! TGTTTCTAAAACAGCACACA+AGG - Chr3:75534190-75534209 MsG0380015818.01.T01:intron 35.0%
!! TTGGCATCTAGCTTTATGTT+TGG - Chr3:75534304-75534323 MsG0380015818.01.T01:CDS 35.0%
!! TTGTTTTACAACTTGCAGAG+TGG - Chr3:75533913-75533932 MsG0380015818.01.T01:intron 35.0%
!!! CCCCTATTTTTGCTATGTTT+AGG + Chr3:75531666-75531685 None:intergenic 35.0%
!!! CTATTTTAAAGTACTCCCTC+CGG + Chr3:75529880-75529899 None:intergenic 35.0%
!!! TGTTGGCTTAAATGCACTTT+TGG - Chr3:75531477-75531496 MsG0380015818.01.T01:intron 35.0%
!!! TGTTTTCTGTTTTTGTTGGC+GGG - Chr3:75528565-75528584 MsG0380015818.01.T01:intron 35.0%
AAACAAAAATAGCCAGCAGG+TGG + Chr3:75534066-75534085 None:intergenic 40.0%
AACTACTCTTGGATGCTCAT+GGG + Chr3:75527822-75527841 None:intergenic 40.0%
AAGATGTGACTGTTGTATCC+TGG - Chr3:75527875-75527894 MsG0380015818.01.T01:intron 40.0%
ACCTAACCAGTTCCAAACTT+TGG + Chr3:75528246-75528265 None:intergenic 40.0%
AGAAGTAACTCAACAATGGG+AGG - Chr3:75533956-75533975 MsG0380015818.01.T01:intron 40.0%
AGACTGTTTGGGAGAACTTA+TGG - Chr3:75533196-75533215 MsG0380015818.01.T01:intron 40.0%
AGAGATACTTAGGCTGTGTT+TGG + Chr3:75527226-75527245 None:intergenic 40.0%
AGATGTGACTGTTGTATCCT+GGG - Chr3:75527876-75527895 MsG0380015818.01.T01:intron 40.0%
AGCAAAAACCCCCAAACTTT+CGG + Chr3:75525334-75525353 None:intergenic 40.0%
AGTATCATCATGGTTCAGGT+CGG + Chr3:75530758-75530777 None:intergenic 40.0%
ATCACAAACACGGGACATAT+AGG + Chr3:75525693-75525712 None:intergenic 40.0%
ATTTCTCTGTTCAGCTGAGA+AGG - Chr3:75534009-75534028 MsG0380015818.01.T01:intron 40.0%
CATTAGGCATGAACACTTCT+AGG - Chr3:75533713-75533732 MsG0380015818.01.T01:intron 40.0%
CTTCACAAACTCATGTATCC+CGG + Chr3:75525823-75525842 None:intergenic 40.0%
CTTGACGACTTGAAATTAGG+AGG - Chr3:75533828-75533847 MsG0380015818.01.T01:intron 40.0%
GAAACCAAAGAAAGGCAAAG+TGG - Chr3:75526945-75526964 MsG0380015818.01.T01:intron 40.0%
GAAGGAGCAAAGTAATTACC+CGG + Chr3:75532638-75532657 None:intergenic 40.0%
GAGAAACGCAGTACACTTTA+AGG - Chr3:75531341-75531360 MsG0380015818.01.T01:intron 40.0%
GCAAAGTAATTACCCGGTAT+TGG + Chr3:75532632-75532651 None:intergenic 40.0%
GCATAGTTGGGAAAATTAGG+GGG + Chr3:75531562-75531581 None:intergenic 40.0%
GCGATACTTTCTATGAGCTT+TGG - Chr3:75528219-75528238 MsG0380015818.01.T01:intron 40.0%
GGTTTGCAGCACAATGAAAA+GGG - Chr3:75527698-75527717 MsG0380015818.01.T01:intron 40.0%
GTCGTCAAGAAAAGTTGGAT+AGG + Chr3:75533817-75533836 None:intergenic 40.0%
GTTTGCAGCACAATGAAAAG+GGG - Chr3:75527699-75527718 MsG0380015818.01.T01:intron 40.0%
TAAATGACGAGAATGCCATG+AGG + Chr3:75531133-75531152 None:intergenic 40.0%
TAGATCGATCTTGACATCCT+CGG + Chr3:75532834-75532853 None:intergenic 40.0%
TATATGTCCCGTGTTTGTGA+TGG - Chr3:75525692-75525711 MsG0380015818.01.T01:intron 40.0%
TCAACAATGGGAGGATGATT+GGG - Chr3:75533965-75533984 MsG0380015818.01.T01:intron 40.0%
TCCCTAATTCGTTTCTTCCA+CGG + Chr3:75533042-75533061 None:intergenic 40.0%
TCCGTGGAAGAAACGAATTA+GGG - Chr3:75533038-75533057 MsG0380015818.01.T01:intron 40.0%
TCTCTGGATTAAAGCAAAGC+AGG - Chr3:75528472-75528491 MsG0380015818.01.T01:intron 40.0%
TGAACTGAACAAGGGTGATA+CGG - Chr3:75531026-75531045 MsG0380015818.01.T01:intron 40.0%
TGAGCTAGACTTTGTGTGTT+TGG - Chr3:75533086-75533105 MsG0380015818.01.T01:intron 40.0%
TGATAATTAACGTCGGAGCT+TGG + Chr3:75524743-75524762 None:intergenic 40.0%
TGCAAGGTCACGTTGTAAAT+TGG + Chr3:75530381-75530400 None:intergenic 40.0%
TGCTACAACGACAAACATAG+GGG - Chr3:75531724-75531743 MsG0380015818.01.T01:intron 40.0%
TTCCGTGGAAGAAACGAATT+AGG - Chr3:75533037-75533056 MsG0380015818.01.T01:intron 40.0%
TTTCTCTGTTCAGCTGAGAA+GGG - Chr3:75534010-75534029 MsG0380015818.01.T01:intron 40.0%
TTTGCAGTTTACTGTGATGG+AGG - Chr3:75528304-75528323 MsG0380015818.01.T01:intron 40.0%
! AAAGGTTTGGTCTAACCTCA+TGG - Chr3:75531115-75531134 MsG0380015818.01.T01:intron 40.0%
! ATGAGCTTTGGTCCAAAGTT+TGG - Chr3:75528231-75528250 MsG0380015818.01.T01:intron 40.0%
! CAGAAGTAGAGACCGTATTT+TGG + Chr3:75528418-75528437 None:intergenic 40.0%
! CTTGAGACAACCTTTTCTTC+CGG - Chr3:75525801-75525820 MsG0380015818.01.T01:intron 40.0%
! GCTTGCTAGAGAACTTATCA+TGG - Chr3:75525351-75525370 MsG0380015818.01.T01:intron 40.0%
! GGTTTTACATCAACTGACAC+TGG + Chr3:75530113-75530132 None:intergenic 40.0%
! TAGTGGACGTAAGATACTTG+AGG - Chr3:75525515-75525534 MsG0380015818.01.T01:intron 40.0%
! TCCAAAGTTTGGAACTGGTT+AGG - Chr3:75528242-75528261 MsG0380015818.01.T01:intron 40.0%
! TCTGAAGAGCGTGAAAAACT+TGG + Chr3:75532506-75532525 None:intergenic 40.0%
! TTGAGACAACCTTTTCTTCC+GGG - Chr3:75525802-75525821 MsG0380015818.01.T01:intron 40.0%
! TTGCAGTTTACTGTGATGGA+GGG - Chr3:75528305-75528324 MsG0380015818.01.T01:intron 40.0%
! TTTGGTCCAAAGTTTGGAAC+TGG - Chr3:75528237-75528256 MsG0380015818.01.T01:intron 40.0%
!! CGACATCCGCTTTTATGTAT+GGG - Chr3:75528527-75528546 MsG0380015818.01.T01:intron 40.0%
!! CGGAGGGAGTACTTTAAAAT+AGG - Chr3:75529878-75529897 MsG0380015818.01.T01:intron 40.0%
!! GACTTTGTAAATTTTGGCGG+TGG - Chr3:75528607-75528626 MsG0380015818.01.T01:intron 40.0%
!! TTAAGAGTATTTCGCCACCT+CGG + Chr3:75527941-75527960 None:intergenic 40.0%
!! TTTGCCACTTTGCCTTTCTT+TGG + Chr3:75526952-75526971 None:intergenic 40.0%
!!! GTTTTAGCTATGCTGATTGG+TGG - Chr3:75528504-75528523 MsG0380015818.01.T01:intron 40.0%
AAAAGAACACATGGGATGGG+AGG - Chr3:75525892-75525911 MsG0380015818.01.T01:intron 45.0%
AAAGAACACATGGGATGGGA+GGG - Chr3:75525893-75525912 MsG0380015818.01.T01:intron 45.0%
AACAAGGACAAGTCAAACGG+TGG + Chr3:75530134-75530153 None:intergenic 45.0%
ACGATGATACATCCTGCACA+AGG + Chr3:75528647-75528666 None:intergenic 45.0%
ACTTGGTTCATGTCAGGTGT+TGG - Chr3:75525154-75525173 MsG0380015818.01.T01:intron 45.0%
AGCTATGAGACCTATCGCAT+CGG - Chr3:75527906-75527925 MsG0380015818.01.T01:intron 45.0%
ATACTTGAGGTGTGCCTCAA+TGG - Chr3:75525528-75525547 MsG0380015818.01.T01:intron 45.0%
ATGAACGATGAACCTTGGAG+TGG + Chr3:75532600-75532619 None:intergenic 45.0%
ATGCCACTACTCTCTTCTCA+TGG - Chr3:75533673-75533692 MsG0380015818.01.T01:intron 45.0%
ATTGCTACGGTGGCAAACAT+AGG + Chr3:75531506-75531525 None:intergenic 45.0%
CAAGTCTCAGGAACTACTCT+TGG + Chr3:75527833-75527852 None:intergenic 45.0%
CACGTGAATTAGCAAGTCTC+AGG + Chr3:75527845-75527864 None:intergenic 45.0%
CATATCCTTAACCAGTGTCC+CGG - Chr3:75532197-75532216 MsG0380015818.01.T01:intron 45.0%
CTCAACAATGGGAGGATGAT+TGG - Chr3:75533964-75533983 MsG0380015818.01.T01:intron 45.0%
CTCATGTATCCCGGAAGAAA+AGG + Chr3:75525814-75525833 None:intergenic 45.0%
GAACTACTCTTGGATGCTCA+TGG + Chr3:75527823-75527842 None:intergenic 45.0%
GATAGGTTATCCGATGCGAT+AGG + Chr3:75527919-75527938 None:intergenic 45.0%
GATGTGACTGTTGTATCCTG+GGG - Chr3:75527877-75527896 MsG0380015818.01.T01:intron 45.0%
GCTACAACGACAAACATAGG+GGG - Chr3:75531725-75531744 MsG0380015818.01.T01:intron 45.0%
GGCGGCATCATGAATTTAGT+TGG + Chr3:75528833-75528852 None:intergenic 45.0%
GGGTTTGCAGCACAATGAAA+AGG - Chr3:75527697-75527716 MsG0380015818.01.T01:intron 45.0%
GGTGCTTAGAGATGATTGTG+AGG - Chr3:75529375-75529394 MsG0380015818.01.T01:intron 45.0%
GTCATGCATATCAACAGCCA+AGG - Chr3:75528801-75528820 MsG0380015818.01.T01:intron 45.0%
GTGGTTACTTGGTTCATGTC+AGG - Chr3:75525148-75525167 MsG0380015818.01.T01:intron 45.0%
TACTTGAGGTGTGCCTCAAT+GGG - Chr3:75525529-75525548 MsG0380015818.01.T01:intron 45.0%
TCGGGTCCCTCAATATGATT+TGG + Chr3:75530947-75530966 None:intergenic 45.0%
TCTCATAGCTAATACTCCCC+AGG + Chr3:75527896-75527915 None:intergenic 45.0%
TGCCACTACTCTCTTCTCAT+GGG - Chr3:75533674-75533693 MsG0380015818.01.T01:intron 45.0%
TGGGCACTTGTCTACTCTAA+TGG - Chr3:75529354-75529373 MsG0380015818.01.T01:intron 45.0%
TGTTATGCTTAACCAGTGCC+CGG + Chr3:75532079-75532098 None:intergenic 45.0%
TTAGGGGGCCAAAATTGCTA+CGG + Chr3:75531519-75531538 None:intergenic 45.0%
TTGCTACGGTGGCAAACATA+GGG + Chr3:75531505-75531524 None:intergenic 45.0%
TTGTGGTCCGGTCAAAAATC+CGG - Chr3:75524675-75524694 MsG0380015818.01.T01:three_prime_UTR 45.0%
! ACATGCAGAAGCGTGACATT+GGG + Chr3:75525601-75525620 None:intergenic 45.0%
! GGTATCTGAGACTTTGAGCT+CGG - Chr3:75534116-75534135 MsG0380015818.01.T01:intron 45.0%
! GTTTGCCACCGTAGCAATTT+TGG - Chr3:75531508-75531527 MsG0380015818.01.T01:intron 45.0%
! TACATGCAGAAGCGTGACAT+TGG + Chr3:75525602-75525621 None:intergenic 45.0%
!! ACATTGGTGCCGAAAGTTTG+GGG - Chr3:75525322-75525341 MsG0380015818.01.T01:intron 45.0%
!! ATGTCAGGTGTTGGTTCATG+TGG - Chr3:75525163-75525182 MsG0380015818.01.T01:intron 45.0%
!! CACATTGGTGCCGAAAGTTT+GGG - Chr3:75525321-75525340 MsG0380015818.01.T01:intron 45.0%
!! CATCTCTCGTGTTGGTTACT+TGG - Chr3:75525102-75525121 MsG0380015818.01.T01:intron 45.0%
!! GAAGTGTTGATTGCGTGAGT+GGG + Chr3:75525557-75525576 None:intergenic 45.0%
!! GAGACTTGCTAATTCACGTG+CGG - Chr3:75527845-75527864 MsG0380015818.01.T01:intron 45.0%
!! GCGACATCCGCTTTTATGTA+TGG - Chr3:75528526-75528545 MsG0380015818.01.T01:intron 45.0%
!! TCACATTGGTGCCGAAAGTT+TGG - Chr3:75525320-75525339 MsG0380015818.01.T01:intron 45.0%
!! TGTCAGGTGTTGGTTCATGT+GGG - Chr3:75525164-75525183 MsG0380015818.01.T01:intron 45.0%
!!! GCGATTATGGCCCCTTTTTT+GGG + Chr3:75531603-75531622 None:intergenic 45.0%
!!! TGCGATTATGGCCCCTTTTT+TGG + Chr3:75531604-75531623 None:intergenic 45.0%
!!! TTCTGTTTTTGTTGGCGGGT+CGG - Chr3:75528569-75528588 MsG0380015818.01.T01:intron 45.0%
!! AATATAATTTATATTGTTAA+AGG + Chr3:75529248-75529267 None:intergenic 5.0%
!! ATATTATATTATATATAAGT+GGG - Chr3:75527677-75527696 MsG0380015818.01.T01:intron 5.0%
!! TAAAAATTAAATTATCTATA+AGG + Chr3:75527269-75527288 None:intergenic 5.0%
!! TATATTATATTATATATAAG+TGG - Chr3:75527676-75527695 MsG0380015818.01.T01:intron 5.0%
!! TTGAAATAATATATTATTAT+AGG + Chr3:75524766-75524785 None:intergenic 5.0%
!!! TTTATTACAAAATATTTTTA+TGG - Chr3:75526741-75526760 MsG0380015818.01.T01:intron 5.0%
AAGGAGACGCCAAACCAAGA+GGG + Chr3:75527443-75527462 None:intergenic 50.0%
AATTAACGTCGGAGCTTGGC+CGG + Chr3:75524739-75524758 None:intergenic 50.0%
ACAAGGTCGTATAGCTCAGC+TGG - Chr3:75530246-75530265 MsG0380015818.01.T01:intron 50.0%
ACCAAGAGGGACACCTTTGA+CGG + Chr3:75527430-75527449 None:intergenic 50.0%
ACTTGCAGAGTGGGATGACA+TGG - Chr3:75533923-75533942 MsG0380015818.01.T01:intron 50.0%
AGCGAAACCTAACCACTCCA+AGG - Chr3:75532585-75532604 MsG0380015818.01.T01:intron 50.0%
AGTATTTCGCCACCTCGGAT+AGG + Chr3:75527936-75527955 None:intergenic 50.0%
AGTGGGATGACATGGAGGAA+GGG - Chr3:75533931-75533950 MsG0380015818.01.T01:intron 50.0%
ATAACCACCGTGATCAACGC+CGG + Chr3:75524630-75524649 None:intergenic 50.0%
ATCCATGGCGACTGAAGCAA+AGG - Chr3:75532802-75532821 MsG0380015818.01.T01:intron 50.0%
ATCCTGCACAAGGTGTGCAA+AGG + Chr3:75528637-75528656 None:intergenic 50.0%
ATCGGATAACCTATCCGAGG+TGG - Chr3:75527924-75527943 MsG0380015818.01.T01:intron 50.0%
ATCTTTCGTCGGCAGTCTGT+TGG + Chr3:75528102-75528121 None:intergenic 50.0%
CACCCATGAGAAGAGAGTAG+TGG + Chr3:75533679-75533698 None:intergenic 50.0%
CCCAAAGCCCCATACTTGAA+GGG + Chr3:75529338-75529357 None:intergenic 50.0%
CCCTTCAAGTATGGGGCTTT+GGG - Chr3:75529335-75529354 MsG0380015818.01.T01:intron 50.0%
CGATGAACCTTGGAGTGGTT+AGG + Chr3:75532595-75532614 None:intergenic 50.0%
CGTTGATCACGGTGGTTATC+CGG - Chr3:75524631-75524650 MsG0380015818.01.T01:three_prime_UTR 50.0%
GATATCATGTGTGGAGCAGC+TGG - Chr3:75528155-75528174 MsG0380015818.01.T01:intron 50.0%
GTTATGCTTAACCAGTGCCC+GGG + Chr3:75532078-75532097 None:intergenic 50.0%
TCCCTTCAAGTATGGGGCTT+TGG - Chr3:75529334-75529353 MsG0380015818.01.T01:intron 50.0%
TCCTACACAGTCTGTTGCGA+AGG + Chr3:75527462-75527481 None:intergenic 50.0%
TCCTTCGCAACAGACTGTGT+AGG - Chr3:75527458-75527477 MsG0380015818.01.T01:intron 50.0%
TGTTCAGCTGAGAAGGGAGT+TGG - Chr3:75534016-75534035 MsG0380015818.01.T01:intron 50.0%
TTATGCTTAACCAGTGCCCG+GGG + Chr3:75532077-75532096 None:intergenic 50.0%
!! CAAAGGTGTCCCTCTTGGTT+TGG - Chr3:75527431-75527450 MsG0380015818.01.T01:intron 50.0%
!! CATTGGTGCCGAAAGTTTGG+GGG - Chr3:75525323-75525342 MsG0380015818.01.T01:intron 50.0%
!! GGAAGTGTTGATTGCGTGAG+TGG + Chr3:75525558-75525577 None:intergenic 50.0%
!!! TTTTGGCTTCGTCGGCTTGT+AGG - Chr3:75530083-75530102 MsG0380015818.01.T01:intron 50.0%
AAATGCTAACCGGTGCCTCC+GGG + Chr3:75532218-75532237 None:intergenic 55.0%
AGCCTTTGCTTCAGTCGCCA+TGG + Chr3:75532807-75532826 None:intergenic 55.0%
ATCCTTAACCAGTGTCCCGG+AGG - Chr3:75532200-75532219 MsG0380015818.01.T01:intron 55.0%
CACTACGTGGGAAGTTGCGT+GGG - Chr3:75526989-75527008 MsG0380015818.01.T01:intron 55.0%
CCGCCACGTGTCCCAAAAAA+GGG - Chr3:75531589-75531608 MsG0380015818.01.T01:intron 55.0%
CGCATCGGATAACCTATCCG+AGG - Chr3:75527921-75527940 MsG0380015818.01.T01:intron 55.0%
CGCCACGTGTCCCAAAAAAG+GGG - Chr3:75531590-75531609 MsG0380015818.01.T01:intron 55.0%
CTCCTTTGCACACCTTGTGC+AGG - Chr3:75528632-75528651 MsG0380015818.01.T01:intron 55.0%
GAAATGCTAACCGGTGCCTC+CGG + Chr3:75532219-75532238 None:intergenic 55.0%
GAAGGAGACGCCAAACCAAG+AGG + Chr3:75527444-75527463 None:intergenic 55.0%
GAGTGGGATGACATGGAGGA+AGG - Chr3:75533930-75533949 MsG0380015818.01.T01:intron 55.0%
GCCCAAAGCCCCATACTTGA+AGG + Chr3:75529339-75529358 None:intergenic 55.0%
GGCGGCTTCCAAGCATAGTT+GGG + Chr3:75531574-75531593 None:intergenic 55.0%
GTCAAAAATCCGGCGGTGGA+CGG - Chr3:75524685-75524704 MsG0380015818.01.T01:three_prime_UTR 55.0%
GTGGTTATCCGGCGATCCAA+GGG - Chr3:75524642-75524661 MsG0380015818.01.T01:three_prime_UTR 55.0%
TATGCTTAACCAGTGCCCGG+GGG + Chr3:75532076-75532095 None:intergenic 55.0%
TCCACGAGTACCCGAAAGCA+CGG - Chr3:75525721-75525740 MsG0380015818.01.T01:intron 55.0%
TGAAGCAAAGGCTGTGACCG+AGG - Chr3:75532814-75532833 MsG0380015818.01.T01:intron 55.0%
TGCAGAGTGGGATGACATGG+AGG - Chr3:75533926-75533945 MsG0380015818.01.T01:intron 55.0%
TGGCGGCTTCCAAGCATAGT+TGG + Chr3:75531575-75531594 None:intergenic 55.0%
TGGTCCGGTCAAAAATCCGG+CGG - Chr3:75524678-75524697 MsG0380015818.01.T01:three_prime_UTR 55.0%
! GCAGAAGCGTGACATTGGGT+CGG + Chr3:75525597-75525616 None:intergenic 55.0%
! TCCACCGCCGGATTTTTGAC+CGG + Chr3:75524685-75524704 None:intergenic 55.0%
! TGAGGCGTGCTCAAAGCACT+GGG + Chr3:75527965-75527984 None:intergenic 55.0%
!! TCCGTCAAAGGTGTCCCTCT+TGG - Chr3:75527426-75527445 MsG0380015818.01.T01:intron 55.0%
!!! CCCTTTTTTGGGACACGTGG+CGG + Chr3:75531592-75531611 None:intergenic 55.0%
AAAAATCCGGCGGTGGACGG+TGG - Chr3:75524688-75524707 MsG0380015818.01.T01:three_prime_UTR 60.0%
CAACACCGGAGCTCCTTCGT+TGG + Chr3:75524715-75524734 None:intergenic 60.0%
CTGAGGCGTGCTCAAAGCAC+TGG + Chr3:75527966-75527985 None:intergenic 60.0%
GCACTACGTGGGAAGTTGCG+TGG - Chr3:75526988-75527007 MsG0380015818.01.T01:intron 60.0%
GCCGCCACGTGTCCCAAAAA+AGG - Chr3:75531588-75531607 MsG0380015818.01.T01:intron 60.0%
GCGTGAGTGGGTACCCATTG+AGG + Chr3:75525545-75525564 None:intergenic 60.0%
GGGGGCCAAAATTGCTACGG+TGG + Chr3:75531516-75531535 None:intergenic 60.0%
GGGTGCGTCCCTCAACACAA+AGG - Chr3:75530205-75530224 MsG0380015818.01.T01:intron 60.0%
GGTGGACAGTGGTGGTCAAC+TGG - Chr3:75524598-75524617 MsG0380015818.01.T01:three_prime_UTR 60.0%
GGTGGTCAACTGGCTACCTC+CGG - Chr3:75524608-75524627 MsG0380015818.01.T01:three_prime_UTR 60.0%
GGTGGTTATCCGGCGATCCA+AGG - Chr3:75524641-75524660 MsG0380015818.01.T01:three_prime_UTR 60.0%
GTCGGCACACGTGTGTGTAG+TGG + Chr3:75525579-75525598 None:intergenic 60.0%
GTGGTCCAACGAAGGAGCTC+CGG - Chr3:75524707-75524726 MsG0380015818.01.T01:three_prime_UTR 60.0%
TCCGGTCAAAAATCCGGCGG+TGG - Chr3:75524681-75524700 MsG0380015818.01.T01:three_prime_UTR 60.0%
! ACCGTGCTTTCGGGTACTCG+TGG + Chr3:75525725-75525744 None:intergenic 60.0%
! GTCCTGTTAATCGGTGCCCC+CGG - Chr3:75532057-75532076 MsG0380015818.01.T01:intron 60.0%
! TCCTGTTAATCGGTGCCCCC+GGG - Chr3:75532058-75532077 MsG0380015818.01.T01:intron 60.0%
! TGCCTCCGGGACACTGGTTA+AGG + Chr3:75532205-75532224 None:intergenic 60.0%
!! GAAGGAGCTCCGGTGTTGAC+CGG - Chr3:75524717-75524736 MsG0380015818.01.T01:three_prime_UTR 60.0%
!! GCTACCTCCGGCGTTGATCA+CGG - Chr3:75524620-75524639 MsG0380015818.01.T01:three_prime_UTR 60.0%
!!! GGCCCCTTTTTTGGGACACG+TGG + Chr3:75531595-75531614 None:intergenic 60.0%
ACACGCTGCCCTTGGATCGC+CGG + Chr3:75524653-75524672 None:intergenic 65.0%
ACCACCGTGATCAACGCCGG+AGG + Chr3:75524627-75524646 None:intergenic 65.0%
CCAAGGGCAGCGTGTGGTTG+TGG - Chr3:75524658-75524677 MsG0380015818.01.T01:three_prime_UTR 65.0%
CCACAACCACACGCTGCCCT+TGG + Chr3:75524661-75524680 None:intergenic 65.0%
GGAGCTTGGCCGGTCAACAC+CGG + Chr3:75524729-75524748 None:intergenic 65.0%
GGCAGCGTGTGGTTGTGGTC+CGG - Chr3:75524663-75524682 MsG0380015818.01.T01:three_prime_UTR 65.0%
GGTGGACGGTGGTCCAACGA+AGG - Chr3:75524699-75524718 MsG0380015818.01.T01:three_prime_UTR 65.0%
! AACCAGTGTCCCGGAGGCAC+CGG - Chr3:75532206-75532225 MsG0380015818.01.T01:intron 65.0%
!! ACCTCCGGCGTTGATCACGG+TGG - Chr3:75524623-75524642 MsG0380015818.01.T01:three_prime_UTR 65.0%
AACCGGTGCCTCCGGGACAC+TGG + Chr3:75532211-75532230 None:intergenic 70.0%
GGCGATCCAAGGGCAGCGTG+TGG - Chr3:75524652-75524671 MsG0380015818.01.T01:three_prime_UTR 70.0%
GTTGGACCACCGTCCACCGC+CGG + Chr3:75524697-75524716 None:intergenic 70.0%
! TAATCGGTGCCCCCGGGCAC+TGG - Chr3:75532064-75532083 MsG0380015818.01.T01:intron 70.0%
!! GCCCGGGGGCACCGATTAAC+AGG + Chr3:75532062-75532081 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75524596 75534387 75524596 ID=MsG0380015818.01;Name=MsG0380015818.01
Chr3 mRNA 75524596 75534387 75524596 ID=MsG0380015818.01.T01;Parent=MsG0380015818.01;Name=MsG0380015818.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.33|0.5|0.75|1|1|4|326|253
Chr3 exon 75524596 75525052 75524596 ID=MsG0380015818.01.T01:exon:1095;Parent=MsG0380015818.01.T01
Chr3 exon 75526087 75526191 75526087 ID=MsG0380015818.01.T01:exon:1094;Parent=MsG0380015818.01.T01
Chr3 exon 75530441 75530877 75530441 ID=MsG0380015818.01.T01:exon:1093;Parent=MsG0380015818.01.T01
Chr3 exon 75534299 75534387 75534299 ID=MsG0380015818.01.T01:exon:1092;Parent=MsG0380015818.01.T01
Chr3 CDS 75534299 75534387 75534299 ID=MsG0380015818.01.T01:cds;Parent=MsG0380015818.01.T01
Chr3 CDS 75530441 75530877 75530441 ID=MsG0380015818.01.T01:cds;Parent=MsG0380015818.01.T01
Chr3 CDS 75526087 75526191 75526087 ID=MsG0380015818.01.T01:cds;Parent=MsG0380015818.01.T01
Chr3 CDS 75524922 75525052 75524922 ID=MsG0380015818.01.T01:cds;Parent=MsG0380015818.01.T01
Chr3 three_prime_UTR 75524596 75524921 75524596 ID=MsG0380015818.01.T01:three_prime_utr;Parent=MsG0380015818.01.T01
Gene Sequence

>MsG0380015818.01.T01

ATGGTGGACAGTGGTGGTCAACTGGCTACCTCCGGCGTTGATCACGGTGGTTATCCGGCGATCCAAGGGCAGCGTGTGGTTGTGGTCCGACTGCCGACGAAAGATAATTTAGCACGACGTGGTGTTCTTAACGTTAATGATATCATGTGTGGAGCAGCTGGTTGTGACAGTTCCGAAACAACATCACATTTGTTTCTTTGTTGCGATACTTTCTATGAGCTTTGGTCCAAAGTTTGGAACTGGTTAGGTATTTATTTCGTTACTCCTGTTGATCTTCGACAACATTTTTTGCAGTTTACTGTGATGGAGGGTATGCCTCGAGTTTCTCATTTATATTGGAGGACAATTTGGTTTGCTACAATTTGGGTAATTTGGAAGGAAAGGAACAACCGTATATTCCAAAATACGGTCTCTACTTCTGTTACTCTTATTGAACAAGTTAAACTAAATTCGTTTCTCTGGATTAAAGCAAAGCAGGTATCCTTTTGTTTTAGCTATGCTGATTGGTGGCGACATCCGCTTTTATATTCAGATTTATCCATGGCGACTGAAGCAAAGGCTGTGACCGAGGATGTCAAGATCGATCTATTCGAAGACGATGATGAGTTCGAAGAGTTTGAAATCAATGAAGAGTGGGATGACATGGAGGAAGGGAAAGAAGTAACTCAACAATGGGAGGATGATTGGGATGATGATGATGTTAGCGATGATTTCTCTGTTCAGCTGAGAAGGGAGTTGGAGAAGACTACTGATAAGAATTAA

Protein sequence

>MsG0380015818.01.T01

MVDSGGQLATSGVDHGGYPAIQGQRVVVVRLPTKDNLARRGVLNVNDIMCGAAGCDSSETTSHLFLCCDTFYELWSKVWNWLGIYFVTPVDLRQHFLQFTVMEGMPRVSHLYWRTIWFATIWVIWKERNNRIFQNTVSTSVTLIEQVKLNSFLWIKAKQVSFCFSYADWWRHPLLYSDLSMATEAKAVTEDVKIDLFEDDDEFEEFEINEEWDDMEEGKEVTQQWEDDWDDDDVSDDFSVQLRRELEKTTDKN*