AlfalfaGEDB | MsG0480018332.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018332.01

KEGG: K03106
GO: GO:0005525 GO:0006614 GO:0008312 GO:0048500
PFAM: PF00448

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018332.01.T01	XP_024638062.1	97.872	141	3	0	4	144	162	302	8.83E-91	280

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018332.01.T01	P49972	90.78	141	13	0	4	144	213	353	5.96E-86	262

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018332.01.T01	G7JGX1	97.872	141	3	0	4	144	213	353	7.63e-91	281

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047825.01	MsG0480018332.01	0.804659	1.942183e-49	1.007127e-46
MsG0080048177.01	MsG0480018332.01	0.806359	8.548697e-50	4.630504e-47
MsG0080048178.01	MsG0480018332.01	0.819930	8.966992e-53	6.995969e-50
MsG0080048205.01	MsG0480018332.01	0.803992	2.675491e-49	1.363825e-46
MsG0080048830.01	MsG0480018332.01	0.814677	1.363826e-51	9.210361e-49
MsG0080048982.01	MsG0480018332.01	0.804581	2.016432e-49	1.043523e-46
MsG0180000089.01	MsG0480018332.01	0.815721	7.994706e-52	5.555191e-49
MsG0180000263.01	MsG0480018332.01	0.803475	3.424324e-49	1.722459e-46
MsG0180000271.01	MsG0480018332.01	0.809352	1.974078e-50	1.156453e-47
MsG0180000320.01	MsG0480018332.01	0.801916	7.182709e-49	3.471983e-46
MsG0180000391.01	MsG0480018332.01	0.814832	1.260160e-51	8.545814e-49
MsG0180000428.01	MsG0480018332.01	0.824942	6.141056e-54	5.519227e-51
MsG0180000555.01	MsG0480018332.01	0.809173	2.156297e-50	1.257138e-47
MsG0180000680.01	MsG0480018332.01	0.813308	2.733330e-51	1.778665e-48
MsG0180000741.01	MsG0480018332.01	0.820221	7.690206e-53	6.048337e-50
MsG0180000797.01	MsG0480018332.01	0.803526	3.342630e-49	1.683638e-46
MsG0180000799.01	MsG0480018332.01	0.805527	1.278572e-49	6.779633e-47
MsG0180000855.01	MsG0480018332.01	0.808375	3.194588e-50	1.823615e-47
MsG0180000856.01	MsG0480018332.01	0.884258	2.235111e-71	1.464710e-67
MsG0180001043.01	MsG0480018332.01	0.838253	3.209014e-57	4.273570e-54
MsG0180001312.01	MsG0480018332.01	0.846907	1.617301e-59	2.825889e-56
MsG0180001570.01	MsG0480018332.01	0.808792	2.602510e-50	1.501812e-47
MsG0180001922.01	MsG0480018332.01	0.891594	3.446259e-74	3.041374e-70
MsG0180001973.01	MsG0480018332.01	0.810717	1.003020e-50	6.091547e-48
MsG0180002071.01	MsG0480018332.01	0.813546	2.423109e-51	1.587104e-48
MsG0180002140.01	MsG0480018332.01	0.851591	8.034714e-61	1.634211e-57
MsG0180002300.01	MsG0480018332.01	0.815127	1.084167e-51	7.410952e-49
MsG0180002491.01	MsG0480018332.01	0.801379	9.259773e-49	4.415495e-46
MsG0180002709.01	MsG0480018332.01	0.814944	1.190092e-51	8.094904e-49
MsG0180003088.01	MsG0480018332.01	0.844135	9.120360e-59	1.458532e-55
MsG0180003190.01	MsG0480018332.01	0.851582	8.079316e-61	1.642845e-57
MsG0180003252.01	MsG0480018332.01	0.834185	3.469004e-56	4.085114e-53
MsG0180003303.01	MsG0480018332.01	0.843434	1.404306e-58	2.196927e-55
MsG0180003379.01	MsG0480018332.01	0.833549	5.003765e-56	5.781758e-53
MsG0180003744.01	MsG0480018332.01	0.849020	4.226605e-60	7.905712e-57
MsG0180004016.01	MsG0480018332.01	0.844045	9.638298e-59	1.537176e-55
MsG0180004056.01	MsG0480018332.01	0.807568	4.744523e-50	2.651446e-47
MsG0180004372.01	MsG0480018332.01	0.807248	5.546712e-50	3.074225e-47
MsG0180004442.01	MsG0480018332.01	0.811044	8.525062e-51	5.222638e-48
MsG0180004444.01	MsG0480018332.01	0.869077	4.056449e-66	1.502212e-62
MsG0180004645.01	MsG0480018332.01	0.820872	5.450625e-53	4.365372e-50
MsG0180004730.01	MsG0480018332.01	0.825443	4.674606e-54	4.261125e-51
MsG0180004986.01	MsG0480018332.01	0.853851	1.817571e-61	3.981783e-58
MsG0180005006.01	MsG0480018332.01	0.823327	1.470227e-53	1.261889e-50
MsG0180005106.01	MsG0480018332.01	0.852579	4.207410e-61	8.830853e-58
MsG0180005125.01	MsG0480018332.01	0.821386	4.149952e-53	3.371351e-50
MsG0180005160.01	MsG0480018332.01	0.841919	3.547381e-58	5.291153e-55
MsG0180005228.01	MsG0480018332.01	0.800992	1.110970e-48	5.246613e-46
MsG0180005304.01	MsG0480018332.01	0.803560	3.288795e-49	1.657988e-46
MsG0180005398.01	MsG0480018332.01	0.803145	4.009322e-49	1.999603e-46
MsG0180005773.01	MsG0480018332.01	0.813807	2.123171e-51	1.400489e-48
MsG0180005787.01	MsG0480018332.01	0.822247	2.624099e-53	2.184382e-50
MsG0180005813.01	MsG0480018332.01	0.811804	5.827642e-51	3.642336e-48
MsG0180005944.01	MsG0480018332.01	0.806205	9.211152e-50	4.970188e-47
MsG0180005949.01	MsG0480018332.01	0.818896	1.543221e-52	1.169944e-49
MsG0180006016.01	MsG0480018332.01	0.852337	4.930855e-61	1.027054e-57
MsG0180006023.01	MsG0480018332.01	0.804898	1.732112e-49	9.038317e-47
MsG0180006047.01	MsG0480018332.01	0.815920	7.218159e-52	5.042515e-49
MsG0180006050.01	MsG0480018332.01	0.875726	2.455705e-68	1.159127e-64
MsG0280006356.01	MsG0480018332.01	0.828645	8.014282e-55	8.013840e-52
MsG0280006432.01	MsG0480018332.01	0.805774	1.134771e-49	6.055818e-47
MsG0280006440.01	MsG0480018332.01	0.835311	1.806788e-56	2.201289e-53
MsG0280010784.01	MsG0480018332.01	0.833216	6.056165e-56	6.928554e-53
MsG0280010901.01	MsG0480018332.01	0.857005	2.191007e-62	5.328822e-59
MsG0280010943.01	MsG0480018332.01	0.827212	1.772127e-54	1.699633e-51
MsG0280010976.01	MsG0480018332.01	0.818393	2.007113e-52	1.500601e-49
MsG0280011056.01	MsG0480018332.01	0.809330	1.995839e-50	1.168465e-47
MsG0280011075.01	MsG0480018332.01	0.831208	1.900979e-55	2.048787e-52
MsG0280011131.01	MsG0480018332.01	0.853033	3.122343e-61	6.654548e-58
MsG0280011191.01	MsG0480018332.01	0.823258	1.526032e-53	1.307270e-50
MsG0280011287.01	MsG0480018332.01	0.809791	1.588686e-50	9.415830e-48
MsG0280011410.01	MsG0480018332.01	0.801205	1.005030e-48	4.771469e-46
MsG0380011729.01	MsG0480018332.01	0.805924	1.055386e-49	5.653721e-47
MsG0380011754.01	MsG0480018332.01	0.830802	2.391862e-55	2.547216e-52
MsG0380012124.01	MsG0480018332.01	0.825107	5.614120e-54	5.069230e-51
MsG0380012458.01	MsG0480018332.01	0.840871	6.695279e-58	9.666067e-55
MsG0380014561.01	MsG0480018332.01	0.843147	1.675188e-58	2.596762e-55
MsG0380014576.01	MsG0480018332.01	0.802957	4.384612e-49	2.176328e-46
MsG0380014913.01	MsG0480018332.01	0.802666	5.035092e-49	2.480686e-46
MsG0380015607.01	MsG0480018332.01	0.860141	2.539865e-63	6.872511e-60
MsG0380015614.01	MsG0480018332.01	0.827451	1.553580e-54	1.500447e-51
MsG0380015770.01	MsG0480018332.01	0.813248	2.818172e-51	1.830750e-48
MsG0380015771.01	MsG0480018332.01	0.813823	2.105563e-51	1.389463e-48
MsG0380015931.01	MsG0480018332.01	0.826029	3.394831e-54	3.146866e-51
MsG0380016055.01	MsG0480018332.01	0.830529	2.790410e-55	2.947576e-52
MsG0380016117.01	MsG0480018332.01	0.840161	1.027156e-57	1.450712e-54
MsG0380016223.01	MsG0480018332.01	0.816211	6.216429e-52	4.377735e-49
MsG0380017003.01	MsG0480018332.01	0.810915	9.089133e-51	5.549357e-48
MsG0380017146.01	MsG0480018332.01	0.812990	3.210780e-51	2.071354e-48
MsG0380017158.01	MsG0480018332.01	0.803396	3.556225e-49	1.785163e-46
MsG0380017210.01	MsG0480018332.01	0.826065	3.327642e-54	3.087684e-51
MsG0380017226.01	MsG0480018332.01	0.808438	3.097516e-50	1.771150e-47
MsG0380017285.01	MsG0480018332.01	0.813210	2.872515e-51	1.864162e-48
MsG0380017286.01	MsG0480018332.01	0.808338	3.252786e-50	1.855051e-47
MsG0380017403.01	MsG0480018332.01	0.824881	6.346127e-54	5.693920e-51
MsG0380017512.01	MsG0480018332.01	0.816467	5.448230e-52	3.863372e-49
MsG0480018321.01	MsG0480018332.01	0.855305	6.898251e-62	1.585697e-58
MsG0480018332.01	MsG0480018460.01	0.837918	3.914281e-57	5.160176e-54
MsG0480018332.01	MsG0480018473.01	0.816172	6.342755e-52	4.461830e-49
MsG0480018332.01	MsG0480018906.01	0.801326	9.494056e-49	4.521149e-46
MsG0480018332.01	MsG0480019289.01	0.841257	5.302428e-58	7.746641e-55
MsG0480018332.01	MsG0480019373.01	0.800057	1.722538e-48	7.943482e-46
MsG0480018332.01	MsG0480019434.01	0.803841	2.875700e-49	1.460190e-46
MsG0480018332.01	MsG0480020144.01	0.809133	2.199601e-50	1.281021e-47
MsG0480018332.01	MsG0480020225.01	0.801844	7.433365e-49	3.586649e-46
MsG0480018332.01	MsG0480020416.01	0.837485	5.056543e-57	6.578011e-54
MsG0480018332.01	MsG0480020445.01	0.831743	1.404049e-55	1.537654e-52
MsG0480018332.01	MsG0480020719.01	0.814597	1.421004e-51	9.575800e-49
MsG0480018332.01	MsG0480020843.01	0.828151	1.054393e-54	1.039340e-51
MsG0480018332.01	MsG0480020923.01	0.801918	7.176173e-49	3.468998e-46
MsG0480018332.01	MsG0480021034.01	0.837460	5.132262e-57	6.671306e-54
MsG0480018332.01	MsG0480021134.01	0.858508	7.853865e-63	2.009104e-59
MsG0480018332.01	MsG0480021204.01	0.877210	7.546227e-69	3.763412e-65
MsG0480018332.01	MsG0480021240.01	0.855300	6.921581e-62	1.590786e-58
MsG0480018332.01	MsG0480021695.01	0.813321	2.715052e-51	1.767443e-48
MsG0480018332.01	MsG0480022026.01	0.820452	6.809142e-53	5.390046e-50
MsG0480018332.01	MsG0480022104.01	0.838181	3.349117e-57	4.450299e-54
MsG0480018332.01	MsG0480022108.01	0.853497	2.297496e-61	4.974095e-58
MsG0480018332.01	MsG0480022479.01	0.801960	7.034468e-49	3.404017e-46
MsG0480018332.01	MsG0480022597.01	0.806830	6.800189e-50	3.728229e-47
MsG0480018332.01	MsG0480022678.01	0.824208	9.144113e-54	8.046333e-51
MsG0480018332.01	MsG0480022752.01	0.824057	9.919368e-54	8.690910e-51
MsG0480018332.01	MsG0480023174.01	0.802754	4.828510e-49	2.384421e-46
MsG0480018332.01	MsG0480023224.01	0.826947	2.051002e-54	1.951872e-51
MsG0480018332.01	MsG0480023270.01	0.832548	8.879654e-56	9.957547e-53
MsG0480018332.01	MsG0480023465.01	0.804836	1.784314e-49	9.295453e-47
MsG0480018332.01	MsG0480023517.01	0.852000	6.151099e-61	1.267289e-57
MsG0480018332.01	MsG0480023554.01	0.830590	2.695038e-55	2.852074e-52
MsG0480018332.01	MsG0480023923.01	0.841142	5.684266e-58	8.275290e-55
MsG0480018332.01	MsG0580024114.01	0.819085	1.397366e-52	1.064822e-49
MsG0480018332.01	MsG0580024205.01	0.844965	5.453008e-59	8.951029e-56
MsG0480018332.01	MsG0580024311.01	0.825323	4.989581e-54	4.533354e-51
MsG0480018332.01	MsG0580024581.01	0.859478	4.021984e-63	1.063702e-59
MsG0480018332.01	MsG0580024956.01	0.861825	7.813920e-64	2.239708e-60
MsG0480018332.01	MsG0580025043.01	0.831238	1.869678e-55	2.016753e-52
MsG0480018332.01	MsG0580025115.01	0.811283	7.565018e-51	4.663504e-48
MsG0480018332.01	MsG0580025134.01	0.807642	4.575257e-50	2.561814e-47
MsG0480018332.01	MsG0580025278.01	0.825801	3.844952e-54	3.541252e-51
MsG0480018332.01	MsG0580025328.01	0.810825	9.507785e-51	5.790845e-48
MsG0480018332.01	MsG0580025414.01	0.806673	7.336929e-50	4.006154e-47
MsG0480018332.01	MsG0580025453.01	0.823884	1.088975e-53	9.496074e-51
MsG0480018332.01	MsG0580025497.01	0.840014	1.122226e-57	1.577849e-54
MsG0480018332.01	MsG0580025769.01	0.810514	1.109911e-50	6.703818e-48
MsG0480018332.01	MsG0580025907.01	0.873969	9.738179e-68	4.307387e-64
MsG0480018332.01	MsG0580025989.01	0.810942	8.970064e-51	5.480671e-48
MsG0480018332.01	MsG0580026011.01	0.801904	7.225628e-49	3.491666e-46
MsG0480018332.01	MsG0580026068.01	0.803100	4.094927e-49	2.039905e-46
MsG0480018332.01	MsG0580026596.01	0.830184	3.388524e-55	3.544138e-52
MsG0480018332.01	MsG0580027034.01	0.830187	3.381334e-55	3.536966e-52
MsG0480018332.01	MsG0580028185.01	0.833001	6.851683e-56	7.788623e-53
MsG0480018332.01	MsG0580028416.01	0.818772	1.646552e-52	1.243960e-49
MsG0480018332.01	MsG0580029639.01	0.806210	9.188677e-50	4.958659e-47
MsG0480018332.01	MsG0580029658.01	0.842024	3.328724e-58	4.981461e-55
MsG0480018332.01	MsG0680030321.01	0.804947	1.691644e-49	8.837889e-47
MsG0480018332.01	MsG0680030351.01	0.806171	9.364280e-50	5.048325e-47
MsG0480018332.01	MsG0680030684.01	0.817673	2.918296e-52	2.139033e-49
MsG0480018332.01	MsG0680030841.01	0.860456	2.040084e-63	5.580209e-60
MsG0480018332.01	MsG0680031051.01	0.808420	3.124808e-50	1.785866e-47
MsG0480018332.01	MsG0680031536.01	0.822526	2.260020e-53	1.896452e-50
MsG0480018332.01	MsG0680031538.01	0.835971	1.229874e-56	1.528160e-53
MsG0480018332.01	MsG0680031654.01	0.828030	1.127512e-54	1.107508e-51
MsG0480018332.01	MsG0680031828.01	0.804862	1.761754e-49	9.184273e-47
MsG0480018332.01	MsG0680032641.01	0.806458	8.146364e-50	4.423996e-47
MsG0480018332.01	MsG0680034067.01	0.850622	1.507388e-60	2.970493e-57
MsG0480018332.01	MsG0680034190.01	0.861596	9.182354e-64	2.612109e-60
MsG0480018332.01	MsG0680034219.01	0.816694	4.846919e-52	3.458410e-49
MsG0480018332.01	MsG0680035278.01	0.801414	9.107037e-49	4.346463e-46
MsG0480018332.01	MsG0680035737.01	0.842681	2.228672e-58	3.404755e-55
MsG0480018332.01	MsG0780036247.01	-0.828991	6.607816e-55	6.673920e-52
MsG0480018332.01	MsG0780036289.01	0.816359	5.760986e-52	4.073341e-49
MsG0480018332.01	MsG0780036845.01	0.814210	1.730180e-51	1.153727e-48
MsG0480018332.01	MsG0780036853.01	0.813079	3.069041e-51	1.984631e-48
MsG0480018332.01	MsG0780037415.01	0.829000	6.575401e-55	6.642947e-52
MsG0480018332.01	MsG0780037503.01	0.810833	9.467667e-51	5.767686e-48
MsG0480018332.01	MsG0780037755.01	0.805611	1.228094e-49	6.526159e-47
MsG0480018332.01	MsG0780037895.01	0.814404	1.567596e-51	1.050922e-48
MsG0480018332.01	MsG0780038092.01	0.814593	1.423776e-51	9.593513e-49
MsG0480018332.01	MsG0780038231.01	0.811890	5.582730e-51	3.497131e-48
MsG0480018332.01	MsG0780038444.01	0.816143	6.436505e-52	4.524244e-49
MsG0480018332.01	MsG0780038911.01	0.805968	1.033100e-49	5.540731e-47
MsG0480018332.01	MsG0780039452.01	0.828976	6.664809e-55	6.728444e-52
MsG0480018332.01	MsG0780039587.01	0.859518	3.914294e-63	1.036523e-59
MsG0480018332.01	MsG0780039741.01	0.803156	3.988248e-49	1.989716e-46
MsG0480018332.01	MsG0780039900.01	0.832209	1.077208e-55	1.195815e-52
MsG0480018332.01	MsG0780040125.01	0.835214	1.911577e-56	2.322075e-53
MsG0480018332.01	MsG0780040679.01	0.828182	1.036134e-54	1.022248e-51
MsG0480018332.01	MsG0780040742.01	0.880483	5.291248e-70	2.987208e-66
MsG0480018332.01	MsG0780040758.01	0.812148	4.904287e-51	3.093988e-48
MsG0480018332.01	MsG0780041310.01	0.810211	1.290141e-50	7.730072e-48
MsG0480018332.01	MsG0780041370.01	0.838290	3.140716e-57	4.187167e-54
MsG0480018332.01	MsG0780041469.01	0.801000	1.107026e-48	5.228985e-46
MsG0480018332.01	MsG0880042329.01	0.812777	3.574707e-51	2.293098e-48
MsG0480018332.01	MsG0880042811.01	0.806804	6.884058e-50	3.771768e-47
MsG0480018332.01	MsG0880043001.01	0.808393	3.167044e-50	1.808745e-47
MsG0480018332.01	MsG0880043082.01	0.836229	1.057563e-56	1.324655e-53
MsG0480018332.01	MsG0880043162.01	0.838559	2.676145e-57	3.597606e-54
MsG0480018332.01	MsG0880043288.01	0.806509	7.948227e-50	4.321878e-47
MsG0480018332.01	MsG0880043341.01	0.840508	8.337690e-58	1.190284e-54
MsG0480018332.01	MsG0880043533.01	0.804054	2.597187e-49	1.326017e-46
MsG0480018332.01	MsG0880043835.01	0.815791	7.715450e-52	5.371397e-49
MsG0480018332.01	MsG0880044409.01	0.805535	1.273914e-49	6.756292e-47
MsG0480018332.01	MsG0880044546.01	0.874872	4.807624e-68	2.200053e-64
MsG0480018332.01	MsG0880045106.01	0.849240	3.670713e-60	6.915769e-57
MsG0480018332.01	MsG0880045165.01	0.809233	2.094217e-50	1.222906e-47
MsG0480018332.01	MsG0880045479.01	0.810600	1.063239e-50	6.436846e-48
MsG0480018332.01	MsG0880045769.01	0.823239	1.541612e-53	1.319904e-50
MsG0480018332.01	MsG0880046047.01	0.859387	4.285528e-63	1.129920e-59
MsG0480018332.01	MsG0880046058.01	0.841901	3.587806e-58	5.348212e-55
MsG0480018332.01	MsG0880046209.01	0.880980	3.508894e-70	2.019439e-66
MsG0480018332.01	MsG0880046226.01	0.815284	1.000168e-51	6.866732e-49
MsG0480018332.01	MsG0880046244.01	0.828669	7.908250e-55	7.913156e-52
MsG0480018332.01	MsG0880046329.01	0.841133	5.714670e-58	8.317167e-55
MsG0480018332.01	MsG0880046342.01	0.838272	3.173746e-57	4.228930e-54
MsG0480018332.01	MsG0880046377.01	0.808941	2.418516e-50	1.401183e-47
MsG0480018332.01	MsG0880046395.01	0.831369	1.736018e-55	1.879998e-52
MsG0480018332.01	MsG0880046396.01	0.804056	2.594056e-49	1.324514e-46
MsG0480018332.01	MsG0880046404.01	0.837754	4.312354e-57	5.657166e-54
MsG0480018332.01	MsG0880046733.01	0.828714	7.711135e-55	7.725790e-52
MsG0480018332.01	MsG0880047019.01	0.874689	5.549367e-68	2.521041e-64
MsG0480018332.01	MsG0880047143.01	0.822895	1.853997e-53	1.572108e-50
MsG0480018332.01	MsG0880047328.01	-0.800573	1.353027e-48	6.321573e-46
MsG0480018332.01	MsG0880047353.01	0.800933	1.142344e-48	5.386435e-46
MsG0480018332.01	MsG0880047375.01	0.840632	7.735448e-58	1.108463e-54
MsG0480018332.01	MsG0880047497.01	0.803582	3.253967e-49	1.641383e-46
MsG0480018332.01	MsG0880047590.01	0.823347	1.454375e-53	1.248969e-50
MsG0480018332.01	MsG0880047745.01	0.817355	3.442915e-52	2.501535e-49
MsG0280006462.01	MsG0480018332.01	0.848612	5.485490e-60	1.012285e-56
MsG0280006501.01	MsG0480018332.01	0.806086	9.755213e-50	5.247590e-47
MsG0280006519.01	MsG0480018332.01	0.802522	5.391751e-49	2.646646e-46
MsG0280006595.01	MsG0480018332.01	0.815180	1.055118e-51	7.222684e-49
MsG0280006682.01	MsG0480018332.01	0.839290	1.731603e-57	2.380314e-54
MsG0280006892.01	MsG0480018332.01	0.821762	3.398770e-53	2.790336e-50
MsG0280006935.01	MsG0480018332.01	0.829151	6.041725e-55	6.131717e-52
MsG0280007011.01	MsG0480018332.01	0.809177	2.152280e-50	1.254913e-47
MsG0280007087.01	MsG0480018332.01	0.801445	8.972772e-49	4.285864e-46
MsG0280007120.01	MsG0480018332.01	0.832944	7.077660e-56	8.031200e-53
MsG0280007272.01	MsG0480018332.01	0.837894	3.969703e-57	5.229365e-54
MsG0280007549.01	MsG0480018332.01	0.832556	8.834923e-56	9.910050e-53
MsG0280007585.01	MsG0480018332.01	0.806089	9.743313e-50	5.241549e-47
MsG0280007714.01	MsG0480018332.01	0.849089	4.044053e-60	7.580668e-57
MsG0280007775.01	MsG0480018332.01	0.827436	1.566375e-54	1.512141e-51
MsG0280007826.01	MsG0480018332.01	0.803230	3.849500e-49	1.924098e-46
MsG0280007848.01	MsG0480018332.01	0.838880	2.210569e-57	3.000978e-54
MsG0280007948.01	MsG0480018332.01	0.821336	4.262536e-53	3.458038e-50
MsG0280008286.01	MsG0480018332.01	0.850290	1.868908e-60	3.643153e-57
MsG0280008502.01	MsG0480018332.01	0.810439	1.152002e-50	6.943983e-48
MsG0280008907.01	MsG0480018332.01	0.811119	8.209562e-51	5.039160e-48
MsG0280009598.01	MsG0480018332.01	0.803708	3.063755e-49	1.550270e-46
MsG0280010416.01	MsG0480018332.01	0.865358	6.258912e-65	2.030406e-61
MsG0280010531.01	MsG0480018332.01	0.828098	1.085787e-54	1.068614e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018332.01.T01	MTR_4g010050	97.872	141	3	0	4	144	213	353	1.93e-94	281
MsG0480018332.01.T01	MTR_2g104050	84.672	137	21	0	4	140	213	349	3.89e-78	239
MsG0480018332.01.T01	MTR_7g085470	64.407	118	31	2	4	116	189	300	8.62e-42	141
MsG0480018332.01.T01	MTR_7g085570	45.217	115	26	2	2	116	188	265	1.75e-21	88.2
MsG0480018332.01.T01	MTR_7g104890	30.882	136	94	0	5	140	146	281	3.16e-18	80.1
MsG0480018332.01.T01	MTR_7g104890	30.882	136	94	0	5	140	279	414	4.38e-18	80.1
MsG0480018332.01.T01	MTR_8g032340	36.709	79	50	0	5	83	289	367	7.13e-12	62.0
MsG0480018332.01.T01	MTR_8g032480	35.366	82	53	0	5	86	114	195	8.60e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018332.01.T01	AT1G48900	87.234	141	18	0	4	144	213	353	2.96e-84	253
MsG0480018332.01.T01	AT1G48900	87.234	141	18	0	4	144	213	353	4.01e-83	253
MsG0480018332.01.T01	AT5G49500	82.270	141	25	0	4	144	93	233	1.51e-80	242
MsG0480018332.01.T01	AT5G49500	82.270	141	25	0	4	144	215	355	3.99e-79	242
MsG0480018332.01.T01	AT1G15310	74.468	141	35	1	4	144	213	352	7.02e-69	215
MsG0480018332.01.T01	AT5G03940	31.618	136	93	0	5	140	289	424	8.48e-19	82.0
MsG0480018332.01.T01	AT2G45770	36.709	79	50	0	5	83	284	362	1.67e-11	61.2

Find 38 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAATTATATTAAACATAAT+AGG	0.211600	4:+3455967	None:intergenic
CCATTTGTCAGTCGTCTATT+AGG	0.261155	4:-3456337	MsG0480018332.01.T01:intron
AAATTATATTAAACATAATA+GGG	0.281770	4:+3455968	None:intergenic
TCAGGCCAGGGAGACTTGTC+TGG	0.286825	4:-3456137	MsG0480018332.01.T01:intron
TGCAGCTTATTAAGCAGTTC+AGG	0.332627	4:+3456071	None:intergenic
CAACACTCTGTTTAAATGCT+TGG	0.344126	4:+3456665	None:intergenic
GATCCATTGGAACAACTTCA+TGG	0.399514	4:+3456099	None:intergenic
AACACTCTGTTTAAATGCTT+GGG	0.406606	4:+3456666	None:intergenic
GTTTCAGAATATTCTTAAGA+TGG	0.414472	4:-3456012	MsG0480018332.01.T01:CDS
CCTGTCATATTCATTGGAAC+TGG	0.418342	4:-3456397	MsG0480018332.01.T01:CDS
AAGAGTCCTGTCATATTCAT+TGG	0.428242	4:-3456403	MsG0480018332.01.T01:CDS
TTTGTCATGGATAGCAGTAT+TGG	0.450799	4:-3456709	MsG0480018332.01.T01:CDS
TTAAACAGAGTGTTGCAGTT+GGG	0.452491	4:-3456657	MsG0480018332.01.T01:CDS
AGATCTTGTTATCTTTGTCA+TGG	0.480044	4:-3456722	MsG0480018332.01.T01:CDS
TTTCAGAATATTCTTAAGAT+GGG	0.482656	4:-3456011	MsG0480018332.01.T01:CDS
CATGGATAGCAGTATTGGTC+AGG	0.485878	4:-3456704	MsG0480018332.01.T01:CDS
ATGACAAAGATAACAAGATC+TGG	0.486961	4:+3456724	None:intergenic
GTACATAATCCTCAAGGTAA+AGG	0.502143	4:+3456040	None:intergenic
TAAACAGAGTGTTGCAGTTG+GGG	0.502364	4:-3456656	MsG0480018332.01.T01:CDS
AATTATATTAAACATAATAG+GGG	0.506718	4:+3455969	None:intergenic
AGTTCAGGCTGTTGATCCAT+TGG	0.517338	4:+3456086	None:intergenic
CCTAATAGACGACTGACAAA+TGG	0.523880	4:+3456337	None:intergenic
CAGGCCAGGGAGACTTGTCT+GGG	0.527597	4:-3456136	MsG0480018332.01.T01:CDS
AATCCATGAAGTTGTTCCAA+TGG	0.540168	4:-3456102	MsG0480018332.01.T01:CDS
AAAATGGATGGCCATGCAAA+GGG	0.540546	4:-3456619	MsG0480018332.01.T01:CDS
GATGGCCATGCAAAGGGTGG+TGG	0.543431	4:-3456613	MsG0480018332.01.T01:CDS
CCAGTTCCAATGAATATGAC+AGG	0.549067	4:+3456397	None:intergenic
GCGCACCACCACCCTTTGCA+TGG	0.554323	4:+3456608	None:intergenic
TGAACCCAGACAAGTCTCCC+TGG	0.565640	4:+3456132	None:intergenic
TTTAAACAGAGTGTTGCAGT+TGG	0.570851	4:-3456658	MsG0480018332.01.T01:CDS
CATTGGAACTGGAGAACACA+TGG	0.583180	4:-3456386	MsG0480018332.01.T01:CDS
CTGCTTAATAAGCTGCAAGA+AGG	0.584033	4:-3456065	MsG0480018332.01.T01:CDS
AGATCTGGTTTCTGAATCAA+CGG	0.586337	4:+3456739	None:intergenic
AAGAAGGAACCTTTACCTTG+AGG	0.616437	4:-3456049	MsG0480018332.01.T01:CDS
ATTATATTAAACATAATAGG+GGG	0.617978	4:+3455970	None:intergenic
CTGCTCGTACATAATCCTCA+AGG	0.625136	4:+3456034	None:intergenic
TAAGATGGGTCCCATGAGCG+AGG	0.637224	4:-3455997	MsG0480018332.01.T01:CDS
ATGGATGGCCATGCAAAGGG+TGG	0.687249	4:-3456616	MsG0480018332.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATAATAGGATTATATC+AGG	+	Chr4:3456142-3456161	None:intergenic	15.0%
!!	AACATCATATTTATATAAGT+TGG	+	Chr4:3456178-3456197	None:intergenic	15.0%
!!	TTAATATACATGCTTGAAAA+AGG	+	Chr4:3456505-3456524	None:intergenic	20.0%
!!	TTTCAGAATATTCTTAAGAT+GGG	-	Chr4:3456696-3456715	MsG0480018332.01.T01:CDS	20.0%
!!!	ATGATGATGATAACAAAAAA+AGG	+	Chr4:3456232-3456251	None:intergenic	20.0%
!	AAGTATATACATGCTTGAAA+AGG	+	Chr4:3456444-3456463	None:intergenic	25.0%
!	GATTAATATAAAGGGAAAAC+TGG	+	Chr4:3456532-3456551	None:intergenic	25.0%
!	GTTTCAGAATATTCTTAAGA+TGG	-	Chr4:3456695-3456714	MsG0480018332.01.T01:CDS	25.0%
!!	TTCAAGCATGTATATACTTT+TGG	-	Chr4:3456445-3456464	MsG0480018332.01.T01:intron	25.0%
!!!	ATTTTTTTTGCTTAGTGTTG+CGG	-	Chr4:3456276-3456295	MsG0480018332.01.T01:intron	25.0%
	AACACTCTGTTTAAATGCTT+GGG	+	Chr4:3456044-3456063	None:intergenic	30.0%
	ACATATCCTAAAACCAATGT+TGG	+	Chr4:3456479-3456498	None:intergenic	30.0%
	ATATACATGCTTGAAAAAGG+TGG	+	Chr4:3456502-3456521	None:intergenic	30.0%
	ATGACAAAGATAACAAGATC+TGG	+	Chr4:3455986-3456005	None:intergenic	30.0%
	CATATCCTAAAACCAATGTT+GGG	+	Chr4:3456478-3456497	None:intergenic	30.0%
	CCTTTATATTAATCTCCAGT+CGG	-	Chr4:3456538-3456557	MsG0480018332.01.T01:intron	30.0%
	CGACTGGAGATTAATATAAA+GGG	+	Chr4:3456540-3456559	None:intergenic	30.0%
	GTCATTATCACAAAAATGGA+TGG	-	Chr4:3456076-3456095	MsG0480018332.01.T01:CDS	30.0%
!	AGATCTTGTTATCTTTGTCA+TGG	-	Chr4:3455985-3456004	MsG0480018332.01.T01:CDS	30.0%
	AAGAGTCCTGTCATATTCAT+TGG	-	Chr4:3456304-3456323	MsG0480018332.01.T01:intron	35.0%
	AATCCATGAAGTTGTTCCAA+TGG	-	Chr4:3456605-3456624	MsG0480018332.01.T01:CDS	35.0%
	CAACACTCTGTTTAAATGCT+TGG	+	Chr4:3456045-3456064	None:intergenic	35.0%
	CATATCCTAAAACCAATGTC+GGG	+	Chr4:3456416-3456435	None:intergenic	35.0%
	CCGACTGGAGATTAATATAA+AGG	+	Chr4:3456541-3456560	None:intergenic	35.0%
	GCATATCCTAAAACCAATGT+CGG	+	Chr4:3456417-3456436	None:intergenic	35.0%
	GGCTGTCATTATCACAAAAA+TGG	-	Chr4:3456072-3456091	MsG0480018332.01.T01:CDS	35.0%
	GTACATAATCCTCAAGGTAA+AGG	+	Chr4:3456670-3456689	None:intergenic	35.0%
	TATACATGCTTGAAAAGGTG+AGG	+	Chr4:3456439-3456458	None:intergenic	35.0%
	TTTGTCATGGATAGCAGTAT+TGG	-	Chr4:3455998-3456017	MsG0480018332.01.T01:CDS	35.0%
!	GTCTATTAGGTGTGTACTTT+TGG	-	Chr4:3456383-3456402	MsG0480018332.01.T01:CDS	35.0%
!	TTAATCTCCAGTCGGTATTT+TGG	-	Chr4:3456546-3456565	MsG0480018332.01.T01:intron	35.0%
!!	TTAAACAGAGTGTTGCAGTT+GGG	-	Chr4:3456050-3456069	MsG0480018332.01.T01:CDS	35.0%
!!	TTTAAACAGAGTGTTGCAGT+TGG	-	Chr4:3456049-3456068	MsG0480018332.01.T01:CDS	35.0%
!!!	TTTGGTTTTTGTCCCAACAT+TGG	-	Chr4:3456463-3456482	MsG0480018332.01.T01:intron	35.0%
!!!	TTTGTCCCAACATTGGTTTT+AGG	-	Chr4:3456470-3456489	MsG0480018332.01.T01:intron	35.0%
	AAAAATGGATGGCCATGCAA+AGG	-	Chr4:3456087-3456106	MsG0480018332.01.T01:CDS	40.0%
	AAAATGGATGGCCATGCAAA+GGG	-	Chr4:3456088-3456107	MsG0480018332.01.T01:CDS	40.0%
	AAGAAGGAACCTTTACCTTG+AGG	-	Chr4:3456658-3456677	MsG0480018332.01.T01:CDS	40.0%
	CCAGTTCCAATGAATATGAC+AGG	+	Chr4:3456313-3456332	None:intergenic	40.0%
	CCATTTGTCAGTCGTCTATT+AGG	-	Chr4:3456370-3456389	MsG0480018332.01.T01:CDS	40.0%
	CCTAATAGACGACTGACAAA+TGG	+	Chr4:3456373-3456392	None:intergenic	40.0%
	CCTGTCATATTCATTGGAAC+TGG	-	Chr4:3456310-3456329	MsG0480018332.01.T01:intron	40.0%
	CTGCTTAATAAGCTGCAAGA+AGG	-	Chr4:3456642-3456661	MsG0480018332.01.T01:CDS	40.0%
	GATCCATTGGAACAACTTCA+TGG	+	Chr4:3456611-3456630	None:intergenic	40.0%
	TGCAGCTTATTAAGCAGTTC+AGG	+	Chr4:3456639-3456658	None:intergenic	40.0%
!!	TAAACAGAGTGTTGCAGTTG+GGG	-	Chr4:3456051-3456070	MsG0480018332.01.T01:CDS	40.0%
	AGTTCAGGCTGTTGATCCAT+TGG	+	Chr4:3456624-3456643	None:intergenic	45.0%
	CATTGGAACTGGAGAACACA+TGG	-	Chr4:3456321-3456340	MsG0480018332.01.T01:intron	45.0%
	CTGCTCGTACATAATCCTCA+AGG	+	Chr4:3456676-3456695	None:intergenic	45.0%
	TATCACGACACAGCAAACAC+AGG	+	Chr4:3456208-3456227	None:intergenic	45.0%
!	TTTGGTTTCTGTCCCGACAT+TGG	-	Chr4:3456401-3456420	MsG0480018332.01.T01:CDS	45.0%
!!	CATGGATAGCAGTATTGGTC+AGG	-	Chr4:3456003-3456022	MsG0480018332.01.T01:CDS	45.0%
!!	TCCAGTCGGTATTTTGGATC+AGG	-	Chr4:3456552-3456571	MsG0480018332.01.T01:intron	45.0%
!!!	TCTGTCCCGACATTGGTTTT+AGG	-	Chr4:3456408-3456427	MsG0480018332.01.T01:CDS	45.0%
!!	TTATATCATATAAATATAAT+AGG	+	Chr4:3456153-3456172	None:intergenic	5.0%
	GCCTGATCCAAAATACCGAC+TGG	+	Chr4:3456556-3456575	None:intergenic	50.0%
!!	CGGTATTTTGGATCAGGCCA+GGG	-	Chr4:3456558-3456577	MsG0480018332.01.T01:intron	50.0%
!!	TCGGTATTTTGGATCAGGCC+AGG	-	Chr4:3456557-3456576	MsG0480018332.01.T01:intron	50.0%
!!!	TGGTCAGGCTGCTTTTGATC+AGG	-	Chr4:3456018-3456037	MsG0480018332.01.T01:CDS	50.0%
	AGGGGGTTAACCTCGCTCAT+GGG	+	Chr4:3456723-3456742	None:intergenic	55.0%
	ATGGATGGCCATGCAAAGGG+TGG	-	Chr4:3456091-3456110	MsG0480018332.01.T01:CDS	55.0%
	TAAGATGGGTCCCATGAGCG+AGG	-	Chr4:3456710-3456729	MsG0480018332.01.T01:CDS	55.0%
	TAGGGGGTTAACCTCGCTCA+TGG	+	Chr4:3456724-3456743	None:intergenic	55.0%
	TGAACCCAGACAAGTCTCCC+TGG	+	Chr4:3456578-3456597	None:intergenic	55.0%
	CAGGCCAGGGAGACTTGTCT+GGG	-	Chr4:3456571-3456590	MsG0480018332.01.T01:intron	60.0%
	GATGGCCATGCAAAGGGTGG+TGG	-	Chr4:3456094-3456113	MsG0480018332.01.T01:CDS	60.0%
	TCAGGCCAGGGAGACTTGTC+TGG	-	Chr4:3456570-3456589	MsG0480018332.01.T01:intron	60.0%
	GCGCACCACCACCCTTTGCA+TGG	+	Chr4:3456102-3456121	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	3455971	3456758	3455971	ID=MsG0480018332.01;Name=MsG0480018332.01
Chr4	mRNA	3455971	3456758	3455971	ID=MsG0480018332.01.T01;Parent=MsG0480018332.01;Name=MsG0480018332.01.T01;_AED=0.50;_eAED=0.51;_QI=0\|0\|0\|1\|1\|1\|3\|0\|147
Chr4	exon	3456601	3456758	3456601	ID=MsG0480018332.01.T01:exon:3722;Parent=MsG0480018332.01.T01
Chr4	exon	3456338	3456438	3456338	ID=MsG0480018332.01.T01:exon:3721;Parent=MsG0480018332.01.T01
Chr4	exon	3455971	3456155	3455971	ID=MsG0480018332.01.T01:exon:3720;Parent=MsG0480018332.01.T01
Chr4	CDS	3456601	3456758	3456601	ID=MsG0480018332.01.T01:cds;Parent=MsG0480018332.01.T01
Chr4	CDS	3456338	3456438	3456338	ID=MsG0480018332.01.T01:cds;Parent=MsG0480018332.01.T01
Chr4	CDS	3455971	3456155	3455971	ID=MsG0480018332.01.T01:cds;Parent=MsG0480018332.01.T01

Gene Sequence

>MsG0480018332.01.T01

TTGATTCAGAAACCAGATCTTGTTATCTTTGTCATGGATAGCAGTATTGGTCAGGCTGCTTTTGATCAGGCCCAAGCATTTAAACAGAGTGTTGCAGTTGGGGCTGTCATTATCACAAAAATGGATGGCCATGCAAAGGGTGGTGGTGCGCTTAGTGCTGTTGCGGCTACAAAGAGTCCTGTCATATTCATTGGAACTGGAGAACACATGGATGAATTTGAAGTTTTTGATGTTAAACCATTTGTCAGTCGTCTATTAGGCCAGGGAGACTTGTCTGGGTTCATGAACAAAATCCATGAAGTTGTTCCAATGGATCAACAGCCTGAACTGCTTAATAAGCTGCAAGAAGGAACCTTTACCTTGAGGATTATGTACGAGCAGTTTCAGAATATTCTTAAGATGGGTCCCATGAGCGAGGTTAACCCCCTATTATGTTTAATATAA

Protein sequence

>MsG0480018332.01.T01

LIQKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGQGDLSGFMNKIHEVVPMDQQPELLNKLQEGTFTLRIMYEQFQNILKMGPMSEVNPLLCLI*