AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031329.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031329.01.T01 MTR_6g029200 91.743 109 8 1 41 149 20 127 2.92e-67 201
MsG0680031329.01.T01 MTR_6g029200 87.069 116 14 1 34 149 23 137 1.47e-66 200
MsG0680031329.01.T01 MTR_7g114240 71.717 99 28 0 51 149 32 130 7.31e-48 152
MsG0680031329.01.T01 MTR_4g057240 63.889 108 38 1 50 156 84 191 2.91e-42 140
MsG0680031329.01.T01 MTR_7g114240 66.667 75 25 0 51 125 32 106 3.58e-32 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031329.01.T01 AT5G18100 69.565 115 33 1 35 149 24 136 1.09e-51 162
MsG0680031329.01.T01 AT5G18100 69.912 113 32 1 35 147 24 134 8.14e-51 159
MsG0680031329.01.T01 AT1G08830 68.519 108 33 1 50 156 31 138 2.04e-47 151
MsG0680031329.01.T01 AT1G08830 68.519 108 33 1 50 156 31 138 2.04e-47 151
MsG0680031329.01.T01 AT2G28190 63.889 108 38 1 50 156 94 201 4.53e-41 137
MsG0680031329.01.T01 AT1G12520 37.615 109 58 3 35 143 41 139 9.95e-12 60.5
MsG0680031329.01.T01 AT1G12520 37.615 109 58 3 35 143 86 184 1.44e-11 60.8
MsG0680031329.01.T01 AT1G12520 37.615 109 58 3 35 143 177 275 2.25e-11 60.8

Find 41 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAATTCATATTGATCATT+AGG 0.273534 6:+18309809 MsG0680031329.01.T01:CDS
CAAACAAGTTCATTGATTCT+TGG 0.282171 6:-18311999 None:intergenic
AACTGGAATGGAAAGATAAC+AGG 0.323048 6:+18311013 MsG0680031329.01.T01:CDS
AACGACAGCCCTCCCGAGTA+TGG 0.340461 6:-18311924 None:intergenic
GGGAATTATACACATATAAC+TGG 0.353333 6:+18310996 MsG0680031329.01.T01:intron
GGGTTGTCTCCAGGTCTTCA+TGG 0.372926 6:+18311034 MsG0680031329.01.T01:CDS
AAGTGATATCATTAGTTCTA+AGG 0.373173 6:-18309735 None:intergenic
GAGCGACATGCCGGTGATTT+GGG 0.381125 6:+18311354 MsG0680031329.01.T01:CDS
TGAGCGACATGCCGGTGATT+TGG 0.389627 6:+18311353 MsG0680031329.01.T01:CDS
GATTTGGGTAACATTGTTGC+AGG 0.395545 6:+18311369 MsG0680031329.01.T01:CDS
GGATTTCATATTCATGCTCT+TGG 0.401989 6:+18311055 MsG0680031329.01.T01:CDS
ATGGAATGAACTCCACTTAG+TGG 0.448974 6:-18311905 None:intergenic
TTACCTCTTCCAAGATCATC+AGG 0.453273 6:-18311959 None:intergenic
CATGCTGATCCTGATGATCT+TGG 0.465371 6:+18311950 MsG0680031329.01.T01:CDS
ACCAATGGCTGCAACTCCAC+TGG 0.499697 6:+18311085 MsG0680031329.01.T01:CDS
ACCGGCATGTCGCTCATCAT+CGG 0.503149 6:-18311346 None:intergenic
AATATGTAGATTCCACTAAG+TGG 0.506400 6:+18311893 MsG0680031329.01.T01:intron
ACCAGTGGAGTTGCAGCCAT+TGG 0.511673 6:-18311086 None:intergenic
TAGAACTAATGATATCACTT+TGG 0.515431 6:+18309738 MsG0680031329.01.T01:CDS
GATTTCTATCAGAGATGAAA+AGG 0.520652 6:+18311508 MsG0680031329.01.T01:CDS
AAGATAACAGGGTTGTCTCC+AGG 0.523191 6:+18311025 MsG0680031329.01.T01:CDS
TTATACACATATAACTGGAA+TGG 0.528355 6:+18311001 MsG0680031329.01.T01:CDS
AGAAATGATTGTGATAATGT+TGG 0.547638 6:+18309777 MsG0680031329.01.T01:CDS
GCTCCGTGATCCTTCTTGAG+TGG 0.554152 6:-18311318 None:intergenic
AGTGGAGTTCATTCCATACT+CGG 0.559047 6:+18311911 MsG0680031329.01.T01:CDS
TCACTTCAATCCACTCAAGA+AGG 0.563861 6:+18311308 MsG0680031329.01.T01:CDS
AACAATGTTACCCAAATCAC+CGG 0.572762 6:-18311364 None:intergenic
AGTGGAGTTGCAGCCATTGG+TGG 0.573666 6:-18311083 None:intergenic
AACATTGTTGCAGGACCTGA+TGG 0.579223 6:+18311378 MsG0680031329.01.T01:CDS
GATCCTGATGATCTTGGAAG+AGG 0.581197 6:+18311956 MsG0680031329.01.T01:CDS
ACCGATGATGAGCGACATGC+CGG 0.585361 6:+18311345 MsG0680031329.01.T01:CDS
GCTCTTGGTGACACCACCAA+TGG 0.586374 6:+18311070 MsG0680031329.01.T01:CDS
GTGGAGTTCATTCCATACTC+GGG 0.606530 6:+18311912 MsG0680031329.01.T01:CDS
ATATGAAATCCATGAAGACC+TGG 0.612117 6:-18311043 None:intergenic
TTCTTGAGTGGATTGAAGTG+AGG 0.612233 6:-18311306 None:intergenic
TGATATCACTTTGGACACGA+AGG 0.624942 6:+18309747 MsG0680031329.01.T01:CDS
AATCCACTCAAGAAGGATCA+CGG 0.630804 6:+18311315 MsG0680031329.01.T01:CDS
AGTTCATTCCATACTCGGGA+GGG 0.640574 6:+18311916 MsG0680031329.01.T01:CDS
GAGTTCATTCCATACTCGGG+AGG 0.641328 6:+18311915 MsG0680031329.01.T01:CDS
GCATGTCGCTCATCATCGGT+AGG 0.650098 6:-18311342 None:intergenic
ACTGGAATGGAAAGATAACA+GGG 0.655275 6:+18311014 MsG0680031329.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAGTTATTAAATAAA+AGG - Chr6:18311647-18311666 None:intergenic 10.0%
!! AATATATACAAAAAGAAAGA+AGG - Chr6:18311409-18311428 None:intergenic 15.0%
!! ATCATATTAGATTATATATC+AGG + Chr6:18310272-18310291 MsG0680031329.01.T01:intron 15.0%
!! ATTATCATTCTAAGTTAAAA+TGG - Chr6:18310137-18310156 None:intergenic 15.0%
!! ATTGTATGATAGTATATATT+TGG - Chr6:18310857-18310876 None:intergenic 15.0%
!!! CTATCATACAATTTTATATT+AGG + Chr6:18310865-18310884 MsG0680031329.01.T01:intron 15.0%
!! AACTTTGAATGAAGTTTAAT+CGG + Chr6:18311657-18311676 MsG0680031329.01.T01:intron 20.0%
!! ACAGATAATAAAAGTAAAAG+AGG - Chr6:18309895-18309914 None:intergenic 20.0%
!! TAAAAAGATTTAACACAAAC+TGG - Chr6:18310911-18310930 None:intergenic 20.0%
!! TAGAATTCATATTGATCATT+AGG + Chr6:18309809-18309828 MsG0680031329.01.T01:CDS 20.0%
!!! AATAAGGATTTAAACTTGTT+AGG - Chr6:18309867-18309886 None:intergenic 20.0%
!!! AGTTTGTGTTAAATCTTTTT+AGG + Chr6:18310910-18310929 MsG0680031329.01.T01:intron 20.0%
!!! CTATGAATTGGTTTTTATAT+TGG + Chr6:18310536-18310555 MsG0680031329.01.T01:intron 20.0%
!!! TTTTAGGTTTTATTTCTCTT+TGG + Chr6:18310926-18310945 MsG0680031329.01.T01:intron 20.0%
! AACCGAATATTTGAAAAGAA+AGG + Chr6:18311205-18311224 MsG0680031329.01.T01:intron 25.0%
! AGTAAAAGAGGAGATTAATA+AGG - Chr6:18309883-18309902 None:intergenic 25.0%
! CATATAGATGAACTATGAAT+TGG + Chr6:18310524-18310543 MsG0680031329.01.T01:intron 25.0%
! CCACTTTAATTAACAATAAG+CGG - Chr6:18311595-18311614 None:intergenic 25.0%
! TAGAACTAATGATATCACTT+TGG + Chr6:18309738-18309757 MsG0680031329.01.T01:CDS 25.0%
! TTATACACATATAACTGGAA+TGG + Chr6:18311001-18311020 MsG0680031329.01.T01:CDS 25.0%
! TTGCTAATATATGAGAAAAG+TGG - Chr6:18311118-18311137 None:intergenic 25.0%
! TTTGTTAATTGATTGAGAGA+TGG + Chr6:18310007-18310026 MsG0680031329.01.T01:intron 25.0%
!! AGAAATGATTGTGATAATGT+TGG + Chr6:18309777-18309796 MsG0680031329.01.T01:CDS 25.0%
!! CACCTTTCTTTTCAAATATT+CGG - Chr6:18311210-18311229 None:intergenic 25.0%
!! CTACATATTTAAAGTGAGAA+AGG - Chr6:18311882-18311901 None:intergenic 25.0%
!! GAGGTAAGCATTTAAATTTT+TGG + Chr6:18311975-18311994 MsG0680031329.01.T01:CDS 25.0%
!! TCTGTTAATTGATTTAGAGA+TGG + Chr6:18309910-18309929 MsG0680031329.01.T01:intron 25.0%
!! TTTTATTCTCTTTACGAAAC+CGG + Chr6:18310723-18310742 MsG0680031329.01.T01:intron 25.0%
!!! AAGTGATATCATTAGTTCTA+AGG - Chr6:18309738-18309757 None:intergenic 25.0%
!!! AATTATGATTTTGATTGTGC+AGG + Chr6:18310975-18310994 MsG0680031329.01.T01:intron 25.0%
!!! AGTCTTTATTTTACAACACT+GGG - Chr6:18311703-18311722 None:intergenic 25.0%
!!! ATTATGATTTTGATTGTGCA+GGG + Chr6:18310976-18310995 MsG0680031329.01.T01:intron 25.0%
!!! TACAAAGTGTCGTTAAATAA+TGG + Chr6:18311777-18311796 MsG0680031329.01.T01:intron 25.0%
!!! TAGTCTTTATTTTACAACAC+TGG - Chr6:18311704-18311723 None:intergenic 25.0%
AATATGTAGATTCCACTAAG+TGG + Chr6:18311893-18311912 MsG0680031329.01.T01:intron 30.0%
AGATGGTAAGTTATTACACT+TGG + Chr6:18309927-18309946 MsG0680031329.01.T01:intron 30.0%
AGTTAAAATGGTGCAAAGAT+TGG - Chr6:18310125-18310144 None:intergenic 30.0%
ATGTATTCAATGTAAAGCGT+CGG - Chr6:18311151-18311170 None:intergenic 30.0%
CCACTCTTAGTAAACTATAT+CGG + Chr6:18310764-18310783 MsG0680031329.01.T01:intron 30.0%
CCGCTTATTGTTAATTAAAG+TGG + Chr6:18311592-18311611 MsG0680031329.01.T01:intron 30.0%
GATATCAGAGTCTATCTATT+CGG - Chr6:18310255-18310274 None:intergenic 30.0%
GATTTCTATCAGAGATGAAA+AGG + Chr6:18311508-18311527 MsG0680031329.01.T01:CDS 30.0%
GGGAATTATACACATATAAC+TGG + Chr6:18310996-18311015 MsG0680031329.01.T01:intron 30.0%
TTGTGAATTGCAGAAAATAG+TGG - Chr6:18311839-18311858 None:intergenic 30.0%
! CAAGTGTTTCAATGCAATTT+TGG + Chr6:18311261-18311280 MsG0680031329.01.T01:intron 30.0%
!! AGTATATATTTGGTAGTGCT+TGG - Chr6:18310847-18310866 None:intergenic 30.0%
AACAATGTTACCCAAATCAC+CGG - Chr6:18311367-18311386 None:intergenic 35.0%
AACTGGAATGGAAAGATAAC+AGG + Chr6:18311013-18311032 MsG0680031329.01.T01:CDS 35.0%
ACTGGAATGGAAAGATAACA+GGG + Chr6:18311014-18311033 MsG0680031329.01.T01:CDS 35.0%
AGATAGAGTAATTCCACTTG+AGG - Chr6:18309966-18309985 None:intergenic 35.0%
AGCGTATAAACCACTTCAAT+TGG + Chr6:18310316-18310335 MsG0680031329.01.T01:intron 35.0%
AGTGAGAAAGGAGTAATTAC+AGG - Chr6:18311870-18311889 None:intergenic 35.0%
ATATGAAATCCATGAAGACC+TGG - Chr6:18311046-18311065 None:intergenic 35.0%
ATATGACAGTGTTTGACGTA+AGG - Chr6:18310509-18310528 None:intergenic 35.0%
ATTAGGTTATGTGTGATGCT+TGG + Chr6:18309826-18309845 MsG0680031329.01.T01:intron 35.0%
CCGATATAGTTTACTAAGAG+TGG - Chr6:18310767-18310786 None:intergenic 35.0%
GGATTTCATATTCATGCTCT+TGG + Chr6:18311055-18311074 MsG0680031329.01.T01:CDS 35.0%
GTGAGAAAGGAGTAATTACA+GGG - Chr6:18311869-18311888 None:intergenic 35.0%
GTTTATACGCTGAATCTGTA+AGG - Chr6:18310307-18310326 None:intergenic 35.0%
TATGACAGTGTTTGACGTAA+GGG - Chr6:18310508-18310527 None:intergenic 35.0%
TGCAAAACAGAAAACTCTCA+AGG - Chr6:18311477-18311496 None:intergenic 35.0%
TTATGTGTGATGCTTGGTTA+AGG + Chr6:18309832-18309851 MsG0680031329.01.T01:intron 35.0%
! AACTCTCAAGGAGATTTTCT+AGG - Chr6:18311465-18311484 None:intergenic 35.0%
! ACTCTCAAGGAGATTTTCTA+GGG - Chr6:18311464-18311483 None:intergenic 35.0%
! ATTTTTCCCAGTGGCAATTT+TGG + Chr6:18310395-18310414 MsG0680031329.01.T01:intron 35.0%
! TTGAGAGTTTTCTGTTTTGC+AGG + Chr6:18311476-18311495 MsG0680031329.01.T01:intron 35.0%
! TTTTTCCCAGTGGCAATTTT+GGG + Chr6:18310396-18310415 MsG0680031329.01.T01:intron 35.0%
AATAAGCGGATCAAGTGACA+AGG - Chr6:18311581-18311600 None:intergenic 40.0%
AATCCACTCAAGAAGGATCA+CGG + Chr6:18311315-18311334 MsG0680031329.01.T01:CDS 40.0%
AGAAAGAAGGTAGTACCATC+AGG - Chr6:18311396-18311415 None:intergenic 40.0%
AGTATTTGTATCGTCTCCAC+AGG - Chr6:18310193-18310212 None:intergenic 40.0%
AGTGGAGTTCATTCCATACT+CGG + Chr6:18311911-18311930 MsG0680031329.01.T01:CDS 40.0%
ATGACAGTGTTTGACGTAAG+GGG - Chr6:18310507-18310526 None:intergenic 40.0%
ATGGAATGAACTCCACTTAG+TGG - Chr6:18311908-18311927 None:intergenic 40.0%
GATTTGGGTAACATTGTTGC+AGG + Chr6:18311369-18311388 MsG0680031329.01.T01:CDS 40.0%
GTATTTGTATCGTCTCCACA+GGG - Chr6:18310192-18310211 None:intergenic 40.0%
TCACTTCAATCCACTCAAGA+AGG + Chr6:18311308-18311327 MsG0680031329.01.T01:CDS 40.0%
TGATATCACTTTGGACACGA+AGG + Chr6:18309747-18309766 MsG0680031329.01.T01:CDS 40.0%
TTACCTCTTCCAAGATCATC+AGG - Chr6:18311962-18311981 None:intergenic 40.0%
TTTATATGTCCAGTAGCCCT+TGG - Chr6:18310672-18310691 None:intergenic 40.0%
! AACCACTTCAATTGGTCTGA+TGG + Chr6:18310324-18310343 MsG0680031329.01.T01:intron 40.0%
! ACGTTACGTCTTTTCAATGC+AGG + Chr6:18310787-18310806 MsG0680031329.01.T01:intron 40.0%
! TTTTCCCAGTGGCAATTTTG+GGG + Chr6:18310397-18310416 MsG0680031329.01.T01:intron 40.0%
!! ATTTGGTAGTGCTTGGCATA+AGG - Chr6:18310840-18310859 None:intergenic 40.0%
!! CGGTTTGGTAAGGATGAATT+AGG - Chr6:18310562-18310581 None:intergenic 40.0%
!! CTTACCAAACCGACTTGTAA+GGG + Chr6:18310570-18310589 MsG0680031329.01.T01:intron 40.0%
!! TTCTTGAGTGGATTGAAGTG+AGG - Chr6:18311309-18311328 None:intergenic 40.0%
!! TTTGGTAGTGCTTGGCATAA+GGG - Chr6:18310839-18310858 None:intergenic 40.0%
AACATTGTTGCAGGACCTGA+TGG + Chr6:18311378-18311397 MsG0680031329.01.T01:CDS 45.0%
AAGATAACAGGGTTGTCTCC+AGG + Chr6:18311025-18311044 MsG0680031329.01.T01:CDS 45.0%
AGTTCATTCCATACTCGGGA+GGG + Chr6:18311916-18311935 MsG0680031329.01.T01:CDS 45.0%
CATGCTGATCCTGATGATCT+TGG + Chr6:18311950-18311969 MsG0680031329.01.T01:CDS 45.0%
CTTTACGAAACCGGTCTGTA+AGG + Chr6:18310732-18310751 MsG0680031329.01.T01:intron 45.0%
GAAAAGTGGAAACCAACCAG+TGG - Chr6:18311104-18311123 None:intergenic 45.0%
GACCATCAGACCAATTGAAG+TGG - Chr6:18310329-18310348 None:intergenic 45.0%
GATCCTGATGATCTTGGAAG+AGG + Chr6:18311956-18311975 MsG0680031329.01.T01:CDS 45.0%
GCATAAGGGGATGCATTGAA+AGG - Chr6:18310825-18310844 None:intergenic 45.0%
GTGGAGTTCATTCCATACTC+GGG + Chr6:18311912-18311931 MsG0680031329.01.T01:CDS 45.0%
TGACAGTGTTTGACGTAAGG+GGG - Chr6:18310506-18310525 None:intergenic 45.0%
TTGATGTCTCTGACCTCAAG+TGG + Chr6:18309950-18309969 MsG0680031329.01.T01:intron 45.0%
! GGCTTTGACTTCTTTACCTC+AGG + Chr6:18311282-18311301 MsG0680031329.01.T01:intron 45.0%
! TCAGCTTCGATTTTTCCCAG+TGG + Chr6:18310386-18310405 MsG0680031329.01.T01:intron 45.0%
! TTTCCCAGTGGCAATTTTGG+GGG + Chr6:18310398-18310417 MsG0680031329.01.T01:intron 45.0%
!! CCTTACAAGTCGGTTTGGTA+AGG - Chr6:18310572-18310591 None:intergenic 45.0%
!! CCTTACCAAACCGACTTGTA+AGG + Chr6:18310569-18310588 MsG0680031329.01.T01:intron 45.0%
!! TTGGTAGTGCTTGGCATAAG+GGG - Chr6:18310838-18310857 None:intergenic 45.0%
AGTGACGCTCCCTTACAAGT+CGG - Chr6:18310582-18310601 None:intergenic 50.0%
ATCGAAGCTGAGACCTTGAG+AGG - Chr6:18310377-18310396 None:intergenic 50.0%
CAATACACCCCTTACGCCAA+GGG + Chr6:18310653-18310672 MsG0680031329.01.T01:intron 50.0%
CTGGGTAAGTACAGTGACTC+AGG - Chr6:18311685-18311704 None:intergenic 50.0%
CTTGTAGTGTGCTCCTCTCA+AGG + Chr6:18310361-18310380 MsG0680031329.01.T01:intron 50.0%
GAGTTCATTCCATACTCGGG+AGG + Chr6:18311915-18311934 MsG0680031329.01.T01:CDS 50.0%
TCAATACACCCCTTACGCCA+AGG + Chr6:18310652-18310671 MsG0680031329.01.T01:intron 50.0%
TGATGTCGCACTAATCCCTG+TGG + Chr6:18310174-18310193 MsG0680031329.01.T01:intron 50.0%
TGGATTGAAGTGAGGACCTG+AGG - Chr6:18311301-18311320 None:intergenic 50.0%
! CAGGGATTAGTGCGACATCA+CGG - Chr6:18310174-18310193 None:intergenic 50.0%
! TTCCCAGTGGCAATTTTGGG+GGG + Chr6:18310399-18310418 MsG0680031329.01.T01:intron 50.0%
ACCAATGGCTGCAACTCCAC+TGG + Chr6:18311085-18311104 MsG0680031329.01.T01:CDS 55.0%
ACCAGTGGAGTTGCAGCCAT+TGG - Chr6:18311089-18311108 None:intergenic 55.0%
ACCGATGATGAGCGACATGC+CGG + Chr6:18311345-18311364 MsG0680031329.01.T01:CDS 55.0%
ACCGGCATGTCGCTCATCAT+CGG - Chr6:18311349-18311368 None:intergenic 55.0%
AGCCCCCCAAAATTGCCACT+GGG - Chr6:18310404-18310423 None:intergenic 55.0%
AGTGGAGTTGCAGCCATTGG+TGG - Chr6:18311086-18311105 None:intergenic 55.0%
ATGGCTGCAACTCCACTGGT+TGG + Chr6:18311089-18311108 MsG0680031329.01.T01:intron 55.0%
CGCTCCCTTACAAGTCGGTT+TGG - Chr6:18310577-18310596 None:intergenic 55.0%
GAAACCGGTCTGTAAGGCGA+GGG + Chr6:18310738-18310757 MsG0680031329.01.T01:intron 55.0%
GAGCGACATGCCGGTGATTT+GGG + Chr6:18311354-18311373 MsG0680031329.01.T01:CDS 55.0%
GCATGTCGCTCATCATCGGT+AGG - Chr6:18311345-18311364 None:intergenic 55.0%
GCTCCGTGATCCTTCTTGAG+TGG - Chr6:18311321-18311340 None:intergenic 55.0%
GGGTTGTCTCCAGGTCTTCA+TGG + Chr6:18311034-18311053 MsG0680031329.01.T01:CDS 55.0%
TAGCCCCCCAAAATTGCCAC+TGG - Chr6:18310405-18310424 None:intergenic 55.0%
TCCAGTAGCCCTTGGCGTAA+GGG - Chr6:18310664-18310683 None:intergenic 55.0%
TGAGCGACATGCCGGTGATT+TGG + Chr6:18311353-18311372 MsG0680031329.01.T01:CDS 55.0%
! CACATGTGCGAGTGTCGTGT+TGG - Chr6:18311175-18311194 None:intergenic 55.0%
! GCTCTTGGTGACACCACCAA+TGG + Chr6:18311070-18311089 MsG0680031329.01.T01:CDS 55.0%
AACGACAGCCCTCCCGAGTA+TGG - Chr6:18311927-18311946 None:intergenic 60.0%
CCAGTAGCCCTTGGCGTAAG+GGG - Chr6:18310663-18310682 None:intergenic 60.0%
CGAAACCGGTCTGTAAGGCG+AGG + Chr6:18310737-18310756 MsG0680031329.01.T01:intron 60.0%
GCAACCCTCGCCTTACAGAC+CGG - Chr6:18310745-18310764 None:intergenic 60.0%
GTCCAGTAGCCCTTGGCGTA+AGG - Chr6:18310665-18310684 None:intergenic 60.0%
CCCCTTACGCCAAGGGCTAC+TGG + Chr6:18310660-18310679 MsG0680031329.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 18309706 18312012 18309706 ID=MsG0680031329.01;Name=MsG0680031329.01
Chr6 mRNA 18309706 18312012 18309706 ID=MsG0680031329.01.T01;Parent=MsG0680031329.01;Name=MsG0680031329.01.T01;_AED=0.50;_eAED=0.64;_QI=0|0.75|0.6|1|1|1|5|0|157
Chr6 exon 18309706 18309830 18309706 ID=MsG0680031329.01.T01:exon:1771;Parent=MsG0680031329.01.T01
Chr6 exon 18310997 18311106 18310997 ID=MsG0680031329.01.T01:exon:1772;Parent=MsG0680031329.01.T01
Chr6 exon 18311304 18311399 18311304 ID=MsG0680031329.01.T01:exon:1773;Parent=MsG0680031329.01.T01
Chr6 exon 18311498 18311529 18311498 ID=MsG0680031329.01.T01:exon:1774;Parent=MsG0680031329.01.T01
Chr6 exon 18311902 18312012 18311902 ID=MsG0680031329.01.T01:exon:1775;Parent=MsG0680031329.01.T01
Chr6 CDS 18309706 18309830 18309706 ID=MsG0680031329.01.T01:cds;Parent=MsG0680031329.01.T01
Chr6 CDS 18310997 18311106 18310997 ID=MsG0680031329.01.T01:cds;Parent=MsG0680031329.01.T01
Chr6 CDS 18311304 18311399 18311304 ID=MsG0680031329.01.T01:cds;Parent=MsG0680031329.01.T01
Chr6 CDS 18311498 18311529 18311498 ID=MsG0680031329.01.T01:cds;Parent=MsG0680031329.01.T01
Chr6 CDS 18311902 18312012 18311902 ID=MsG0680031329.01.T01:cds;Parent=MsG0680031329.01.T01
Gene Sequence

>MsG0680031329.01.T01

ATGATCTTGACAGAATTGTTTAAACGATACCTTAGAACTAATGATATCACTTTGGACACGAAGGATATTGTAGAAATGATTGTGATAATGTTGGTTATGAAGCTAGAATTCATATTGATCATTAGGGAATTATACACATATAACTGGAATGGAAAGATAACAGGGTTGTCTCCAGGTCTTCATGGATTTCATATTCATGCTCTTGGTGACACCACCAATGGCTGCAACTCCACTGGTCCTCACTTCAATCCACTCAAGAAGGATCACGGAGCTCCTACCGATGATGAGCGACATGCCGGTGATTTGGGTAACATTGTTGCAGGACCTGATGGAGTTGCTGAGATTTCTATCAGAGATGAAAAGATTCCACTAAGTGGAGTTCATTCCATACTCGGGAGGGCTGTCGTTGTTCATGCTGATCCTGATGATCTTGGAAGAGGTAAGCATTTAAATTTTTGGACCAAGAATCAATGA
Protein sequence

>MsG0680031329.01.T01

MILTELFKRYLRTNDITLDTKDIVEMIVIMLVMKLEFILIIRELYTYNWNGKITGLSPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPTDDERHAGDLGNIVAGPDGVAEISIRDEKIPLSGVHSILGRAVVVHADPDDLGRGKHLNFWTKNQ*