Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037371.01.T01 | XP_003622294.1 | 96.982 | 729 | 22 | 0 | 1 | 729 | 1 | 729 | 0 | 1478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037371.01.T01 | Q9SS87 | 46.154 | 728 | 368 | 12 | 3 | 717 | 19 | 735 | 0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037371.01.T01 | Q2HUY0 | 96.982 | 729 | 22 | 0 | 1 | 729 | 1 | 729 | 0.0 | 1478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048701.01 | MsG0780037371.01 | 0.834388 | 3.085590e-56 | 3.656265e-53 |
| MsG0180000111.01 | MsG0780037371.01 | 0.808444 | 3.087899e-50 | 1.765945e-47 |
| MsG0180000983.01 | MsG0780037371.01 | 0.842691 | 2.215328e-58 | 3.385397e-55 |
| MsG0180003360.01 | MsG0780037371.01 | 0.828573 | 8.340862e-55 | 8.323073e-52 |
| MsG0180003427.01 | MsG0780037371.01 | 0.809737 | 1.632066e-50 | 9.659150e-48 |
| MsG0180004098.01 | MsG0780037371.01 | 0.842109 | 3.159967e-58 | 4.742204e-55 |
| MsG0180004102.01 | MsG0780037371.01 | 0.872011 | 4.412024e-67 | 1.816649e-63 |
| MsG0180005633.01 | MsG0780037371.01 | 0.823655 | 1.232429e-53 | 1.067800e-50 |
| MsG0180005924.01 | MsG0780037371.01 | 0.853725 | 1.976358e-61 | 4.311218e-58 |
| MsG0380013636.01 | MsG0780037371.01 | 0.892114 | 2.138456e-74 | 1.927249e-70 |
| MsG0380014594.01 | MsG0780037371.01 | 0.848736 | 5.069595e-60 | 9.394328e-57 |
| MsG0380014881.01 | MsG0780037371.01 | 0.800658 | 1.299734e-48 | 6.085886e-46 |
| MsG0480019124.01 | MsG0780037371.01 | 0.802099 | 6.587267e-49 | 3.199027e-46 |
| MsG0480019699.01 | MsG0780037371.01 | 0.806288 | 8.845141e-50 | 4.782720e-47 |
| MsG0480020366.01 | MsG0780037371.01 | 0.834955 | 2.221954e-56 | 2.678149e-53 |
| MsG0480021069.01 | MsG0780037371.01 | 0.817267 | 3.602758e-52 | 2.611343e-49 |
| MsG0480022036.01 | MsG0780037371.01 | 0.827053 | 1.934575e-54 | 1.846705e-51 |
| MsG0480022331.01 | MsG0780037371.01 | 0.820589 | 6.333929e-53 | 5.032266e-50 |
| MsG0480022873.01 | MsG0780037371.01 | 0.817629 | 2.986149e-52 | 2.186038e-49 |
| MsG0580024954.01 | MsG0780037371.01 | 0.802386 | 5.751320e-49 | 2.813689e-46 |
| MsG0580025120.01 | MsG0780037371.01 | 0.812877 | 3.397839e-51 | 2.185458e-48 |
| MsG0580025766.01 | MsG0780037371.01 | 0.841373 | 4.941943e-58 | 7.246975e-55 |
| MsG0380015190.01 | MsG0780037371.01 | 0.844189 | 8.817771e-59 | 1.412639e-55 |
| MsG0380015548.01 | MsG0780037371.01 | 0.805578 | 1.247596e-49 | 6.624176e-47 |
| MsG0380015736.01 | MsG0780037371.01 | 0.872003 | 4.438104e-67 | 1.826790e-63 |
| MsG0380016480.01 | MsG0780037371.01 | 0.848148 | 7.369489e-60 | 1.339592e-56 |
| MsG0380017421.01 | MsG0780037371.01 | 0.881854 | 1.697884e-70 | 1.010822e-66 |
| MsG0380017779.01 | MsG0780037371.01 | 0.836309 | 1.009252e-56 | 1.267147e-53 |
| MsG0380017819.01 | MsG0780037371.01 | 0.817904 | 2.588130e-52 | 1.909003e-49 |
| MsG0380017989.01 | MsG0780037371.01 | 0.811675 | 6.217199e-51 | 3.872353e-48 |
| MsG0380018029.01 | MsG0780037371.01 | 0.806691 | 7.274663e-50 | 3.973978e-47 |
| MsG0480018346.01 | MsG0780037371.01 | 0.815980 | 7.000531e-52 | 4.898738e-49 |
| MsG0580026310.01 | MsG0780037371.01 | 0.801354 | 9.365706e-49 | 4.463364e-46 |
| MsG0580027461.01 | MsG0780037371.01 | 0.831774 | 1.379872e-55 | 1.512646e-52 |
| MsG0580028328.01 | MsG0780037371.01 | 0.813385 | 2.629218e-51 | 1.714558e-48 |
| MsG0580028884.01 | MsG0780037371.01 | 0.830219 | 3.321557e-55 | 3.477611e-52 |
| MsG0580029298.01 | MsG0780037371.01 | 0.844907 | 5.652882e-59 | 9.261475e-56 |
| MsG0580029390.01 | MsG0780037371.01 | 0.818585 | 1.815532e-52 | 1.364462e-49 |
| MsG0580029494.01 | MsG0780037371.01 | 0.890930 | 6.307292e-74 | 5.414525e-70 |
| MsG0580029496.01 | MsG0780037371.01 | 0.810590 | 1.068707e-50 | 6.468194e-48 |
| MsG0280006924.01 | MsG0780037371.01 | 0.808798 | 2.594250e-50 | 1.497309e-47 |
| MsG0280008722.01 | MsG0780037371.01 | 0.815759 | 7.839961e-52 | 5.453423e-49 |
| MsG0280008740.01 | MsG0780037371.01 | 0.876947 | 9.305164e-69 | 4.596480e-65 |
| MsG0280010352.01 | MsG0780037371.01 | 0.820450 | 6.815192e-53 | 5.394535e-50 |
| MsG0780037371.01 | MsG0780038655.01 | 0.857552 | 1.509731e-62 | 3.740668e-59 |
| MsG0780037371.01 | MsG0780038707.01 | 0.839596 | 1.442004e-57 | 2.000984e-54 |
| MsG0780037371.01 | MsG0780038952.01 | 0.830523 | 2.799217e-55 | 2.956442e-52 |
| MsG0780037371.01 | MsG0780038955.01 | 0.825487 | 4.564947e-54 | 4.166535e-51 |
| MsG0780037371.01 | MsG0780041271.01 | 0.817579 | 3.065267e-52 | 2.240856e-49 |
| MsG0780037371.01 | MsG0880041846.01 | 0.801326 | 9.490263e-49 | 4.519454e-46 |
| MsG0780037371.01 | MsG0880043855.01 | 0.858810 | 6.377609e-63 | 1.648313e-59 |
| MsG0780037371.01 | MsG0880044041.01 | 0.810063 | 1.388418e-50 | 8.287518e-48 |
| MsG0780037371.01 | MsG0880044984.01 | 0.814157 | 1.777237e-51 | 1.183451e-48 |
| MsG0780037371.01 | MsG0880044989.01 | 0.814512 | 1.483634e-51 | 9.975474e-49 |
| MsG0780037371.01 | MsG0880046319.01 | 0.858130 | 1.017424e-62 | 2.569926e-59 |
| MsG0780037371.01 | MsG0880046940.01 | 0.850554 | 1.575360e-60 | 3.097500e-57 |
| MsG0780037371.01 | MsG0880047228.01 | 0.876700 | 1.133920e-68 | 5.550580e-65 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037371.01.T01 | MTR_7g032660 | 96.982 | 729 | 22 | 0 | 1 | 729 | 1 | 729 | 0.0 | 1478 |
| MsG0780037371.01.T01 | MTR_3g075450 | 44.979 | 707 | 376 | 10 | 6 | 709 | 8 | 704 | 0.0 | 598 |
| MsG0780037371.01.T01 | MTR_8g089660 | 44.509 | 692 | 371 | 10 | 26 | 711 | 20 | 704 | 0.0 | 589 |
| MsG0780037371.01.T01 | MTR_1g074990 | 33.815 | 692 | 403 | 18 | 25 | 713 | 24 | 663 | 1.84e-118 | 370 |
| MsG0780037371.01.T01 | MTR_1g074950 | 32.639 | 720 | 419 | 17 | 1 | 711 | 1 | 663 | 6.95e-118 | 369 |
| MsG0780037371.01.T01 | MTR_1g075230 | 33.797 | 719 | 407 | 22 | 10 | 713 | 1 | 665 | 7.25e-115 | 361 |
| MsG0780037371.01.T01 | MTR_1g075095 | 32.417 | 691 | 412 | 18 | 25 | 711 | 24 | 663 | 1.04e-109 | 348 |
| MsG0780037371.01.T01 | MTR_1g075030 | 31.838 | 691 | 416 | 18 | 25 | 711 | 24 | 663 | 1.03e-107 | 342 |
| MsG0780037371.01.T01 | MTR_1g040360 | 30.946 | 698 | 419 | 23 | 26 | 710 | 30 | 677 | 1.16e-95 | 311 |
| MsG0780037371.01.T01 | MTR_1g075170 | 26.806 | 720 | 422 | 27 | 20 | 713 | 29 | 669 | 1.69e-63 | 224 |
| MsG0780037371.01.T01 | MTR_1g075180 | 26.483 | 725 | 419 | 25 | 14 | 713 | 3 | 638 | 8.40e-58 | 208 |
| MsG0780037371.01.T01 | MTR_1g075153 | 27.673 | 636 | 369 | 22 | 104 | 712 | 93 | 664 | 1.14e-53 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037371.01.T01 | AT3G01680 | 46.154 | 728 | 368 | 12 | 3 | 717 | 19 | 735 | 0.0 | 656 |
| MsG0780037371.01.T01 | AT3G01670 | 34.747 | 731 | 417 | 17 | 8 | 709 | 121 | 820 | 1.14e-128 | 402 |
| MsG0780037371.01.T01 | AT3G01670 | 34.747 | 731 | 417 | 17 | 8 | 709 | 145 | 844 | 1.25e-128 | 402 |
| MsG0780037371.01.T01 | AT1G67790 | 28.713 | 707 | 425 | 24 | 27 | 707 | 11 | 664 | 1.39e-79 | 268 |
Find 151 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCTACAAGATTCTTTC+TGG | 0.178003 | 7:+24503180 | MsG0780037371.01.T01:CDS |
| AAACAAACAAACAAACATTT+AGG | 0.205792 | 7:-24506355 | None:intergenic |
| GACTTGTTTCAGTTGGATTT+TGG | 0.208899 | 7:-24505862 | None:intergenic |
| ACAGCTTTCAAGGAACATTA+TGG | 0.233933 | 7:+24506068 | MsG0780037371.01.T01:CDS |
| CTTTAAACTATGGCGAATTC+TGG | 0.250204 | 7:+24503295 | MsG0780037371.01.T01:CDS |
| TCTTCTTTAAAACTTGTAAA+AGG | 0.252332 | 7:-24505228 | None:intergenic |
| ACAAATCTCTTTATCCATTC+AGG | 0.258994 | 7:-24505648 | None:intergenic |
| ACAGTTTATTACATTGATTC+AGG | 0.267378 | 7:-24506386 | None:intergenic |
| TCTCAAATTGCATTTGCTTT+TGG | 0.270633 | 7:-24505017 | None:intergenic |
| GCAGCATTTGCTTTAAACTA+TGG | 0.277299 | 7:+24503285 | MsG0780037371.01.T01:CDS |
| TAAGCCGATTCTTGTTGTTT+TGG | 0.280115 | 7:+24505137 | MsG0780037371.01.T01:CDS |
| AATATCTGATGATACCATTT+TGG | 0.307627 | 7:+24502644 | MsG0780037371.01.T01:CDS |
| TTCAACTGGTTTACAATCAT+TGG | 0.314448 | 7:+24505995 | MsG0780037371.01.T01:CDS |
| CTATTCACATGATGTGGATT+TGG | 0.328711 | 7:+24505190 | MsG0780037371.01.T01:CDS |
| ACAATAGATATGAACTAGTT+TGG | 0.335329 | 7:+24504959 | MsG0780037371.01.T01:CDS |
| AAGATCAATTAATTAGTGTT+AGG | 0.336995 | 7:-24506269 | None:intergenic |
| TATTCACATGATGTGGATTT+GGG | 0.340749 | 7:+24505191 | MsG0780037371.01.T01:CDS |
| TCATCAGATATTACATTTGC+AGG | 0.343903 | 7:-24502633 | None:intergenic |
| AAGGGTCTTGTTGTATAAAC+TGG | 0.349917 | 7:+24506411 | MsG0780037371.01.T01:three_prime_UTR |
| CACATCATGTGAATAGCATT+AGG | 0.359069 | 7:-24505183 | None:intergenic |
| AAAGCATGATATGGTTCTTC+TGG | 0.370042 | 7:+24505814 | MsG0780037371.01.T01:CDS |
| TCAGAGGTTTGATCTACAAT+TGG | 0.372783 | 7:-24504985 | None:intergenic |
| TATACCAGAAAGAATCTTGT+AGG | 0.379009 | 7:-24503184 | None:intergenic |
| ATGACTAGCATTGGCAAGTT+AGG | 0.384278 | 7:+24502573 | MsG0780037371.01.T01:CDS |
| ATTTGAGTTCTCACATTCAA+TGG | 0.387294 | 7:+24506124 | MsG0780037371.01.T01:CDS |
| ACGATGGTGTTTCAAAGAAA+AGG | 0.388410 | 7:+24504716 | MsG0780037371.01.T01:CDS |
| TGATACCAGGTAACTGCTTA+AGG | 0.404617 | 7:-24503368 | None:intergenic |
| ATAGACCAGTATGCAGCAAC+TGG | 0.409238 | 7:-24503549 | None:intergenic |
| CTCTTTGGAAGGATGAGACT+TGG | 0.410927 | 7:+24505253 | MsG0780037371.01.T01:CDS |
| AACAAACAAACAAACATTTA+GGG | 0.411559 | 7:-24506354 | None:intergenic |
| CAGCTTTCAAGGAACATTAT+GGG | 0.412419 | 7:+24506069 | MsG0780037371.01.T01:CDS |
| TGGTTTCGAAACAGCTTTCA+AGG | 0.415474 | 7:+24506058 | MsG0780037371.01.T01:CDS |
| TTTGGTTCATACAGAGTGAA+TGG | 0.416366 | 7:+24505103 | MsG0780037371.01.T01:CDS |
| TGATCTAGTAAATGTCATAT+TGG | 0.421018 | 7:+24503434 | MsG0780037371.01.T01:CDS |
| CAGAGGTTTGATCTACAATT+GGG | 0.422585 | 7:-24504984 | None:intergenic |
| GGTTGGATTGTTCTAGCAAA+AGG | 0.423246 | 7:+24505945 | MsG0780037371.01.T01:CDS |
| GTTGAACTCAATGACACATT+TGG | 0.424252 | 7:-24503463 | None:intergenic |
| GAAATGGATACCGAAGCTTA+TGG | 0.426947 | 7:+24504601 | MsG0780037371.01.T01:CDS |
| CAAATCTCTTTATCCATTCA+GGG | 0.428121 | 7:-24505647 | None:intergenic |
| TTGACTCGGAAATATTGAAC+TGG | 0.428475 | 7:+24505301 | MsG0780037371.01.T01:CDS |
| CGATGGTGTTTCAAAGAAAA+GGG | 0.429895 | 7:+24504717 | MsG0780037371.01.T01:CDS |
| GGATCATCTCAGAAAGCAAC+TGG | 0.431497 | 7:+24504169 | MsG0780037371.01.T01:CDS |
| ACATCATGTGAATAGCATTA+GGG | 0.449066 | 7:-24505182 | None:intergenic |
| TGATAAGCAAGGCAGTTGTT+TGG | 0.450189 | 7:+24505085 | MsG0780037371.01.T01:CDS |
| AAGCTCCCAAGCATCATTAG+AGG | 0.450821 | 7:-24504114 | None:intergenic |
| CTTCACCTCTAATGATGCTT+GGG | 0.452359 | 7:+24504109 | MsG0780037371.01.T01:CDS |
| TGTCATCGACTTGTTTCAGT+TGG | 0.453249 | 7:-24505869 | None:intergenic |
| ATTGAATGCAGAGAAAGAAA+TGG | 0.455102 | 7:+24504585 | MsG0780037371.01.T01:intron |
| ATCAATTAATTAGTGTTAGG+AGG | 0.459512 | 7:-24506266 | None:intergenic |
| GTCAATGGACATGCTTCAAC+TGG | 0.459520 | 7:+24505981 | MsG0780037371.01.T01:CDS |
| GGTCAGAACAAAGCATGATA+TGG | 0.459683 | 7:+24505805 | MsG0780037371.01.T01:CDS |
| TTTCAAGCTTAGAAGTATAG+TGG | 0.462798 | 7:+24504148 | MsG0780037371.01.T01:CDS |
| ATGATTTGAGACAGTGTTGT+AGG | 0.469733 | 7:-24503523 | None:intergenic |
| TTTGAAACACCATCGTATAG+AGG | 0.473195 | 7:-24504709 | None:intergenic |
| TCGGGGCACGTGAGTCGATC+AGG | 0.474156 | 7:-24506155 | None:intergenic |
| TCTTCACCTCTAATGATGCT+TGG | 0.475443 | 7:+24504108 | MsG0780037371.01.T01:CDS |
| TCCAACATGCTTGTGTAGGC+AGG | 0.476904 | 7:-24503042 | None:intergenic |
| TAAGCAGTTACCTGGTATCA+TGG | 0.483030 | 7:+24503371 | MsG0780037371.01.T01:CDS |
| TTGGTTACAATGACTAGCAT+TGG | 0.484127 | 7:+24502564 | MsG0780037371.01.T01:exon |
| CTACAAGTGGGATGTTAAGT+TGG | 0.484466 | 7:+24503251 | MsG0780037371.01.T01:CDS |
| ATGCATATTCCGACGACACT+CGG | 0.487421 | 7:-24506174 | None:intergenic |
| GGGTCACAAATTGTGGTCAA+TGG | 0.488045 | 7:+24505966 | MsG0780037371.01.T01:CDS |
| ATATCCCAGTTGCTGCATAC+TGG | 0.495294 | 7:+24503544 | MsG0780037371.01.T01:CDS |
| TGCATATTCCGACGACACTC+GGG | 0.499131 | 7:-24506173 | None:intergenic |
| GGATCCAAAACAACAAGAAT+CGG | 0.502769 | 7:-24505141 | None:intergenic |
| CCTTGTCTGTTAAGATTGAT+CGG | 0.504469 | 7:+24503067 | MsG0780037371.01.T01:CDS |
| TAAAGAAGAAACTCTTTGGA+AGG | 0.506286 | 7:+24505242 | MsG0780037371.01.T01:CDS |
| TTTGAGTTCTCACATTCAAT+GGG | 0.506462 | 7:+24506125 | MsG0780037371.01.T01:CDS |
| TCTCTTGTAATGTATTGAGT+TGG | 0.509904 | 7:-24503492 | None:intergenic |
| CTGATTCGACAGATTAAGGA+AGG | 0.511043 | 7:+24505594 | MsG0780037371.01.T01:intron |
| TGCTTGGGAGCTTTCAACAT+TGG | 0.511362 | 7:+24504124 | MsG0780037371.01.T01:CDS |
| TTGTAGATCAAACCTCTGAA+TGG | 0.512233 | 7:+24504989 | MsG0780037371.01.T01:CDS |
| CTCAAATATTGCGACTGTTG+TGG | 0.512636 | 7:-24503217 | None:intergenic |
| AGTTTATACAACAAGACCCT+TGG | 0.512791 | 7:-24506409 | None:intergenic |
| TCAATGTAATAAACTGTCCA+AGG | 0.516537 | 7:+24506392 | MsG0780037371.01.T01:three_prime_UTR |
| GTTTAAAGCAAATGCTGCTA+AGG | 0.517521 | 7:-24503280 | None:intergenic |
| CCGTAGCAATCCATAAGCTT+CGG | 0.518755 | 7:-24504611 | None:intergenic |
| GTCTTCAAGTTGATCAACAC+TGG | 0.519808 | 7:-24503007 | None:intergenic |
| GACAGAGAAGAGATGGTGAT+TGG | 0.523523 | 7:-24502503 | None:intergenic |
| TGCCTACACAAGCATGTTGG+AGG | 0.524812 | 7:+24503044 | MsG0780037371.01.T01:CDS |
| CCTCTTCAACATTATCATCA+TGG | 0.524927 | 7:-24506220 | None:intergenic |
| TCATATCTATTGTCTTGTCT+CGG | 0.526932 | 7:-24504949 | None:intergenic |
| AGCAAAAGGGTCACAAATTG+TGG | 0.526965 | 7:+24505959 | MsG0780037371.01.T01:CDS |
| TCTTCCTTCTCAGTGCCTCA+AGG | 0.527809 | 7:-24504837 | None:intergenic |
| AAAATCTCTTTACTCACAGC+TGG | 0.529976 | 7:+24505784 | MsG0780037371.01.T01:CDS |
| ACATCATAATCAAGTCCCTC+AGG | 0.531841 | 7:-24502693 | None:intergenic |
| GCTACGACAAACAAGGCGGT+TGG | 0.534775 | 7:+24505928 | MsG0780037371.01.T01:CDS |
| ACTGCCTTGCTTATCAATGA+AGG | 0.536170 | 7:-24505078 | None:intergenic |
| AGTTCTCACATTCAATGGGA+AGG | 0.538806 | 7:+24506129 | MsG0780037371.01.T01:CDS |
| GCTCGTCGGTTGAGAACTCT+AGG | 0.540108 | 7:-24504882 | None:intergenic |
| AGATTGAGACAGAGAAGAGA+TGG | 0.545373 | 7:-24502510 | None:intergenic |
| GATTGATCGGATTTCTTGTG+AGG | 0.546451 | 7:+24503080 | MsG0780037371.01.T01:CDS |
| CCGAAGCTTATGGATTGCTA+CGG | 0.546772 | 7:+24504611 | MsG0780037371.01.T01:CDS |
| ACGGAGGAGACGACCCTGAA+TGG | 0.549939 | 7:+24505634 | MsG0780037371.01.T01:CDS |
| GTTGGATTGTTCTAGCAAAA+GGG | 0.555014 | 7:+24505946 | MsG0780037371.01.T01:CDS |
| CTTGAATGCTCCATGATACC+AGG | 0.555831 | 7:-24503381 | None:intergenic |
| AAAGATCATGCTGAACGAGT+TGG | 0.562674 | 7:+24506038 | MsG0780037371.01.T01:CDS |
| TCACGTGCCCCGAGTGTCGT+CGG | 0.563863 | 7:+24506165 | MsG0780037371.01.T01:CDS |
| ATCTTCATGTTGTCAGTGTG+TGG | 0.573092 | 7:-24504649 | None:intergenic |
| GCTTGTCGATGGCATTGACT+CGG | 0.574483 | 7:+24505287 | MsG0780037371.01.T01:CDS |
| ATTACAAGCCTCACTACACT+TGG | 0.579365 | 7:+24503600 | MsG0780037371.01.T01:CDS |
| AGACTTGAATTGCTTGTCGA+TGG | 0.580658 | 7:+24505276 | MsG0780037371.01.T01:CDS |
| ATCATGGCAGCACTGAAAAG+TGG | 0.581872 | 7:-24506204 | None:intergenic |
| CGAAGCTTATGGATTGCTAC+GGG | 0.582507 | 7:+24504612 | MsG0780037371.01.T01:CDS |
| AGCTTTGATTTATTCACATG+AGG | 0.583992 | 7:+24504678 | MsG0780037371.01.T01:CDS |
| TGAGCCTTGAGGCACTGAGA+AGG | 0.585698 | 7:+24504833 | MsG0780037371.01.T01:CDS |
| AGATGCTTACAATCTACAAG+TGG | 0.588400 | 7:+24503238 | MsG0780037371.01.T01:CDS |
| GCGATCCTTAAGCAGTTACC+TGG | 0.588897 | 7:+24503363 | MsG0780037371.01.T01:CDS |
| TTGTATAAACTGGAGTACAT+TGG | 0.589409 | 7:+24506421 | MsG0780037371.01.T01:three_prime_UTR |
| CTGGTCTATTAGAAGTATTG+TGG | 0.591915 | 7:+24503563 | MsG0780037371.01.T01:CDS |
| ACAGATCTATAACGAATCAA+AGG | 0.592872 | 7:+24504918 | MsG0780037371.01.T01:CDS |
| AGAAGCCCGAAAAGTAGCAC+AGG | 0.593107 | 7:+24505674 | MsG0780037371.01.T01:CDS |
| CCGATCAATCTTAACAGACA+AGG | 0.596956 | 7:-24503067 | None:intergenic |
| CTTCTTAGCTACGACAAACA+AGG | 0.597780 | 7:+24505921 | MsG0780037371.01.T01:CDS |
| GGGCTATGCAATAAACTGCA+TGG | 0.599388 | 7:-24506334 | None:intergenic |
| CCATGATGATAATGTTGAAG+AGG | 0.600515 | 7:+24506220 | MsG0780037371.01.T01:CDS |
| TCTTCAACGATATGTAGAAG+TGG | 0.605315 | 7:-24502720 | None:intergenic |
| GACACGTACACCGCTAGAGA+TGG | 0.608051 | 7:+24505698 | MsG0780037371.01.T01:CDS |
| ACATGCTTGTGTAGGCAGGA+AGG | 0.608112 | 7:-24503038 | None:intergenic |
| TCCTGCCTACACAAGCATGT+TGG | 0.608700 | 7:+24503041 | MsG0780037371.01.T01:CDS |
| GTTGCAGATCATAATCCTGA+GGG | 0.611999 | 7:+24502678 | MsG0780037371.01.T01:CDS |
| AATCATGTTCAGAACTGCTG+AGG | 0.612635 | 7:-24502761 | None:intergenic |
| CTAATGCTATTCACATGATG+TGG | 0.614448 | 7:+24505184 | MsG0780037371.01.T01:CDS |
| GGGCAAGCAACCCTCCCTTG+TGG | 0.617535 | 7:-24505162 | None:intergenic |
| TTCGAGTATTAAAAGCTCGT+CGG | 0.618447 | 7:-24504896 | None:intergenic |
| TCATCCTTCATTGATAAGCA+AGG | 0.620107 | 7:+24505074 | MsG0780037371.01.T01:CDS |
| GAACCAACTTGCAAAATCGA+TGG | 0.621698 | 7:+24503341 | MsG0780037371.01.T01:CDS |
| CAGTTCTGAACATGATTCAA+CGG | 0.622032 | 7:+24502767 | MsG0780037371.01.T01:CDS |
| AGAACTCAAATCTACAACAA+GGG | 0.635472 | 7:-24506112 | None:intergenic |
| TAGACCAGTATGCAGCAACT+GGG | 0.636843 | 7:-24503548 | None:intergenic |
| CAATGTAATAAACTGTCCAA+GGG | 0.639320 | 7:+24506393 | MsG0780037371.01.T01:three_prime_UTR |
| GATATCTGCAAAATACACAT+TGG | 0.645540 | 7:+24504191 | MsG0780037371.01.T01:CDS |
| TGACTCGGAAATATTGAACT+GGG | 0.646970 | 7:+24505302 | MsG0780037371.01.T01:CDS |
| ATCATGTTCAGAACTGCTGA+GGG | 0.648501 | 7:-24502760 | None:intergenic |
| GGCCTCCAACATGCTTGTGT+AGG | 0.655722 | 7:-24503046 | None:intergenic |
| ATGCAACAACTGATGAAAGG+TGG | 0.657551 | 7:+24502600 | MsG0780037371.01.T01:CDS |
| AGTTGCAGATCATAATCCTG+AGG | 0.658892 | 7:+24502677 | MsG0780037371.01.T01:CDS |
| GATGCTTACAATCTACAAGT+GGG | 0.660888 | 7:+24503239 | MsG0780037371.01.T01:CDS |
| GAGAACTCAAATCTACAACA+AGG | 0.667294 | 7:-24506113 | None:intergenic |
| TGGTTGAGTATGATCTCATG+TGG | 0.669554 | 7:+24506015 | MsG0780037371.01.T01:CDS |
| ATCTGAGAGAGAGTATGCCG+TGG | 0.670911 | 7:+24505040 | MsG0780037371.01.T01:CDS |
| TCATTAAGCGTATCAAATCG+TGG | 0.673115 | 7:-24503414 | None:intergenic |
| ACTCATAACCAAGTGTAGTG+AGG | 0.676352 | 7:-24503608 | None:intergenic |
| CCTACGTATACCATCTCTAG+CGG | 0.681871 | 7:-24505708 | None:intergenic |
| GCATATTCCGACGACACTCG+GGG | 0.682705 | 7:-24506172 | None:intergenic |
| GCTATGCAACAACTGATGAA+AGG | 0.685640 | 7:+24502597 | MsG0780037371.01.T01:CDS |
| GGATGATACACCGAAAACCA+CGG | 0.687314 | 7:-24505057 | None:intergenic |
| CCGCTAGAGATGGTATACGT+AGG | 0.695174 | 7:+24505708 | MsG0780037371.01.T01:CDS |
| AAACAAACAGGTGAGCCTTG+AGG | 0.711245 | 7:+24504822 | MsG0780037371.01.T01:intron |
| ATTCACATGATGTGGATTTG+GGG | 0.712683 | 7:+24505192 | MsG0780037371.01.T01:CDS |
| CTTAGCTACGACAAACAAGG+CGG | 0.730750 | 7:+24505924 | MsG0780037371.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATAATAATTAGTATAAT+CGG | - | Chr7:24504790-24504809 | None:intergenic | 10.0% |
| !! | ACTTAAATATTATATTTAGA+TGG | + | Chr7:24504220-24504239 | MsG0780037371.01.T01:intron | 10.0% |
| !! | ATCTAAATATAATATTTAAG+TGG | - | Chr7:24504221-24504240 | None:intergenic | 10.0% |
| !! | AGAAAAATAAATACGTAATA+GGG | - | Chr7:24505576-24505595 | None:intergenic | 15.0% |
| !! | TAAGTATTTAGAAATGTTAT+TGG | - | Chr7:24504758-24504777 | None:intergenic | 15.0% |
| !! | AAACAAACAAACAAACATTT+AGG | - | Chr7:24506358-24506377 | None:intergenic | 20.0% |
| !! | AACAAACAAACAAACATTTA+GGG | - | Chr7:24506357-24506376 | None:intergenic | 20.0% |
| !! | AAGATCAATTAATTAGTGTT+AGG | - | Chr7:24506272-24506291 | None:intergenic | 20.0% |
| !! | AATTACCTAAACAATATTCT+CGG | + | Chr7:24503112-24503131 | MsG0780037371.01.T01:intron | 20.0% |
| !! | CAGAAAAATAAATACGTAAT+AGG | - | Chr7:24505577-24505596 | None:intergenic | 20.0% |
| !! | TATAACGAACAATATTTACT+TGG | - | Chr7:24502832-24502851 | None:intergenic | 20.0% |
| !!! | ATAATGTATTGTTTCTTTCA+GGG | + | Chr7:24502976-24502995 | MsG0780037371.01.T01:intron | 20.0% |
| !!! | CACACAAAAATATTTTTTGT+AGG | + | Chr7:24504260-24504279 | MsG0780037371.01.T01:intron | 20.0% |
| !!! | GTTGTTTGTTTTCATTATTT+TGG | + | Chr7:24506294-24506313 | MsG0780037371.01.T01:three_prime_UTR | 20.0% |
| !!! | TATAATGTATTGTTTCTTTC+AGG | + | Chr7:24502975-24502994 | MsG0780037371.01.T01:intron | 20.0% |
| !!! | TATTTTGGTTTTGTTGATTA+TGG | + | Chr7:24506309-24506328 | MsG0780037371.01.T01:three_prime_UTR | 20.0% |
| !!! | TCTTCTTTAAAACTTGTAAA+AGG | - | Chr7:24505231-24505250 | None:intergenic | 20.0% |
| ! | ACAATAGATATGAACTAGTT+TGG | + | Chr7:24504959-24504978 | MsG0780037371.01.T01:CDS | 25.0% |
| ! | ATCAATTAATTAGTGTTAGG+AGG | - | Chr7:24506269-24506288 | None:intergenic | 25.0% |
| ! | TAGCATGAATGTACAAAAAA+GGG | - | Chr7:24505366-24505385 | None:intergenic | 25.0% |
| ! | TATGATTAATGCAAACAAAC+AGG | + | Chr7:24504810-24504829 | MsG0780037371.01.T01:intron | 25.0% |
| ! | TATTAGCTAATAGTCAATCT+TGG | + | Chr7:24504462-24504481 | MsG0780037371.01.T01:intron | 25.0% |
| ! | TGATCTAGTAAATGTCATAT+TGG | + | Chr7:24503434-24503453 | MsG0780037371.01.T01:CDS | 25.0% |
| ! | TTCAATGACCATCTTAAATT+AGG | - | Chr7:24504571-24504590 | None:intergenic | 25.0% |
| ! | TTCGATTCTCAAAATTGTAA+CGG | + | Chr7:24502870-24502889 | MsG0780037371.01.T01:intron | 25.0% |
| !! | AACTATTTTCTTCACCAAAA+TGG | - | Chr7:24502661-24502680 | None:intergenic | 25.0% |
| !! | AATATCTGATGATACCATTT+TGG | + | Chr7:24502644-24502663 | MsG0780037371.01.T01:CDS | 25.0% |
| !!! | AATGTGTTACTTCTATTTTC+AGG | + | Chr7:24504859-24504878 | MsG0780037371.01.T01:CDS | 25.0% |
| !!! | ACAGTTTATTACATTGATTC+AGG | - | Chr7:24506389-24506408 | None:intergenic | 25.0% |
| !!! | GTTTTAAAGAAGAAACTCTT+TGG | + | Chr7:24505238-24505257 | MsG0780037371.01.T01:CDS | 25.0% |
| !!! | TTTACACTTTTCTTTTTCGT+TGG | + | Chr7:24502545-24502564 | MsG0780037371.01.T01:five_prime_UTR | 25.0% |
| AACAGTACTAAACACAACTT+CGG | + | Chr7:24505501-24505520 | MsG0780037371.01.T01:intron | 30.0% | |
| ACAAATCTCTTTATCCATTC+AGG | - | Chr7:24505651-24505670 | None:intergenic | 30.0% | |
| ACAGATCTATAACGAATCAA+AGG | + | Chr7:24504918-24504937 | MsG0780037371.01.T01:CDS | 30.0% | |
| ACATCATGTGAATAGCATTA+GGG | - | Chr7:24505185-24505204 | None:intergenic | 30.0% | |
| AGAACTCAAATCTACAACAA+GGG | - | Chr7:24506115-24506134 | None:intergenic | 30.0% | |
| ATTCAACGGTATGATTCTAA+CGG | + | Chr7:24502781-24502800 | MsG0780037371.01.T01:intron | 30.0% | |
| ATTGAATGCAGAGAAAGAAA+TGG | + | Chr7:24504585-24504604 | MsG0780037371.01.T01:intron | 30.0% | |
| ATTTCCTACAAGATTCTTTC+TGG | + | Chr7:24503180-24503199 | MsG0780037371.01.T01:CDS | 30.0% | |
| CAAATCTCTTTATCCATTCA+GGG | - | Chr7:24505650-24505669 | None:intergenic | 30.0% | |
| CAATGTAATAAACTGTCCAA+GGG | + | Chr7:24506393-24506412 | MsG0780037371.01.T01:three_prime_UTR | 30.0% | |
| CAGATAGATTGATATATGCA+TGG | - | Chr7:24504509-24504528 | None:intergenic | 30.0% | |
| CATGCATATATCAATCTATC+TGG | + | Chr7:24504507-24504526 | MsG0780037371.01.T01:intron | 30.0% | |
| GATATCTGCAAAATACACAT+TGG | + | Chr7:24504191-24504210 | MsG0780037371.01.T01:CDS | 30.0% | |
| GTAGCATGAATGTACAAAAA+AGG | - | Chr7:24505367-24505386 | None:intergenic | 30.0% | |
| GTATAGAATCAGTGTTATCA+TGG | - | Chr7:24504425-24504444 | None:intergenic | 30.0% | |
| TAAAGAAGAAACTCTTTGGA+AGG | + | Chr7:24505242-24505261 | MsG0780037371.01.T01:CDS | 30.0% | |
| TAAAGATCTCGATAAATGAC+AGG | - | Chr7:24503642-24503661 | None:intergenic | 30.0% | |
| TAGATTGATATATGCATGGA+TGG | - | Chr7:24504505-24504524 | None:intergenic | 30.0% | |
| TATACCAGAAAGAATCTTGT+AGG | - | Chr7:24503187-24503206 | None:intergenic | 30.0% | |
| TATTCACATGATGTGGATTT+GGG | + | Chr7:24505191-24505210 | MsG0780037371.01.T01:CDS | 30.0% | |
| TCAAACCGAGAATATTGTTT+AGG | - | Chr7:24503120-24503139 | None:intergenic | 30.0% | |
| TCAATGTAATAAACTGTCCA+AGG | + | Chr7:24506392-24506411 | MsG0780037371.01.T01:three_prime_UTR | 30.0% | |
| TCATATCTATTGTCTTGTCT+CGG | - | Chr7:24504952-24504971 | None:intergenic | 30.0% | |
| TCATCAGATATTACATTTGC+AGG | - | Chr7:24502636-24502655 | None:intergenic | 30.0% | |
| TCTCTTGTAATGTATTGAGT+TGG | - | Chr7:24503495-24503514 | None:intergenic | 30.0% | |
| TTGAAGTAGTTGCTCAAAAA+CGG | - | Chr7:24503824-24503843 | None:intergenic | 30.0% | |
| TTGTATAAACTGGAGTACAT+TGG | + | Chr7:24506421-24506440 | MsG0780037371.01.T01:three_prime_UTR | 30.0% | |
| ! | AAGAGTATATCAGAAATTCG+AGG | - | Chr7:24502910-24502929 | None:intergenic | 30.0% |
| ! | AGCTTTGATTTATTCACATG+AGG | + | Chr7:24504678-24504697 | MsG0780037371.01.T01:CDS | 30.0% |
| ! | ATTTGAGTTCTCACATTCAA+TGG | + | Chr7:24506124-24506143 | MsG0780037371.01.T01:CDS | 30.0% |
| ! | TCTCAAATTGCATTTGCTTT+TGG | - | Chr7:24505020-24505039 | None:intergenic | 30.0% |
| ! | TTCAACTGGTTTACAATCAT+TGG | + | Chr7:24505995-24506014 | MsG0780037371.01.T01:CDS | 30.0% |
| ! | TTTCAAGCTTAGAAGTATAG+TGG | + | Chr7:24504148-24504167 | MsG0780037371.01.T01:CDS | 30.0% |
| ! | TTTGAGTTCTCACATTCAAT+GGG | + | Chr7:24506125-24506144 | MsG0780037371.01.T01:CDS | 30.0% |
| !! | GGAAAGTACATTTTCTTGTA+CGG | + | Chr7:24505615-24505634 | MsG0780037371.01.T01:CDS | 30.0% |
| !! | TCTATCTGGTTTGATTCTTT+TGG | + | Chr7:24504521-24504540 | MsG0780037371.01.T01:intron | 30.0% |
| !! | TTTTCTGATTCGACAGATTA+AGG | + | Chr7:24505590-24505609 | MsG0780037371.01.T01:intron | 30.0% |
| !!! | TTTTGATTTCTTGCATCACA+AGG | - | Chr7:24505899-24505918 | None:intergenic | 30.0% |
| AAAATCTCTTTACTCACAGC+TGG | + | Chr7:24505784-24505803 | MsG0780037371.01.T01:CDS | 35.0% | |
| AAAGCATGATATGGTTCTTC+TGG | + | Chr7:24505814-24505833 | MsG0780037371.01.T01:CDS | 35.0% | |
| ACAGCTTTCAAGGAACATTA+TGG | + | Chr7:24506068-24506087 | MsG0780037371.01.T01:CDS | 35.0% | |
| ACCAAACAGAGACTAAAAGA+AGG | + | Chr7:24503998-24504017 | MsG0780037371.01.T01:intron | 35.0% | |
| ACGATGGTGTTTCAAAGAAA+AGG | + | Chr7:24504716-24504735 | MsG0780037371.01.T01:CDS | 35.0% | |
| AGATGCTTACAATCTACAAG+TGG | + | Chr7:24503238-24503257 | MsG0780037371.01.T01:CDS | 35.0% | |
| AGATGTCTGCTATAAGCTAA+CGG | - | Chr7:24503713-24503732 | None:intergenic | 35.0% | |
| AGTGTTATCATGGAGTATAG+CGG | - | Chr7:24504415-24504434 | None:intergenic | 35.0% | |
| AGTTTATACAACAAGACCCT+TGG | - | Chr7:24506412-24506431 | None:intergenic | 35.0% | |
| ATTCACATGATGTGGATTTG+GGG | + | Chr7:24505192-24505211 | MsG0780037371.01.T01:CDS | 35.0% | |
| CACATCATGTGAATAGCATT+AGG | - | Chr7:24505186-24505205 | None:intergenic | 35.0% | |
| CAGAGGTTTGATCTACAATT+GGG | - | Chr7:24504987-24505006 | None:intergenic | 35.0% | |
| CAGCTTTCAAGGAACATTAT+GGG | + | Chr7:24506069-24506088 | MsG0780037371.01.T01:CDS | 35.0% | |
| CCAAACAGAGACTAAAAGAA+GGG | + | Chr7:24503999-24504018 | MsG0780037371.01.T01:intron | 35.0% | |
| CCTCTTCAACATTATCATCA+TGG | - | Chr7:24506223-24506242 | None:intergenic | 35.0% | |
| CCTTGTCTGTTAAGATTGAT+CGG | + | Chr7:24503067-24503086 | MsG0780037371.01.T01:CDS | 35.0% | |
| CGATGGTGTTTCAAAGAAAA+GGG | + | Chr7:24504717-24504736 | MsG0780037371.01.T01:CDS | 35.0% | |
| CTAATGCTATTCACATGATG+TGG | + | Chr7:24505184-24505203 | MsG0780037371.01.T01:CDS | 35.0% | |
| CTATTCACATGATGTGGATT+TGG | + | Chr7:24505190-24505209 | MsG0780037371.01.T01:CDS | 35.0% | |
| CTTTAAACTATGGCGAATTC+TGG | + | Chr7:24503295-24503314 | MsG0780037371.01.T01:CDS | 35.0% | |
| GAGAACTCAAATCTACAACA+AGG | - | Chr7:24506116-24506135 | None:intergenic | 35.0% | |
| GATATATGCATGGATGGATA+TGG | - | Chr7:24504499-24504518 | None:intergenic | 35.0% | |
| GATGCTTACAATCTACAAGT+GGG | + | Chr7:24503239-24503258 | MsG0780037371.01.T01:CDS | 35.0% | |
| GGATCCAAAACAACAAGAAT+CGG | - | Chr7:24505144-24505163 | None:intergenic | 35.0% | |
| GTTGAACTCAATGACACATT+TGG | - | Chr7:24503466-24503485 | None:intergenic | 35.0% | |
| GTTGGATTGTTCTAGCAAAA+GGG | + | Chr7:24505946-24505965 | MsG0780037371.01.T01:CDS | 35.0% | |
| TATGATGTGCATCTAAGCAT+TGG | + | Chr7:24504545-24504564 | MsG0780037371.01.T01:intron | 35.0% | |
| TCAGAGGTTTGATCTACAAT+TGG | - | Chr7:24504988-24505007 | None:intergenic | 35.0% | |
| TCATCCTTCATTGATAAGCA+AGG | + | Chr7:24505074-24505093 | MsG0780037371.01.T01:CDS | 35.0% | |
| TCATTAAGCGTATCAAATCG+TGG | - | Chr7:24503417-24503436 | None:intergenic | 35.0% | |
| TCTTCAACGATATGTAGAAG+TGG | - | Chr7:24502723-24502742 | None:intergenic | 35.0% | |
| TTCGAGTATTAAAAGCTCGT+CGG | - | Chr7:24504899-24504918 | None:intergenic | 35.0% | |
| TTGGTTACAATGACTAGCAT+TGG | + | Chr7:24502564-24502583 | MsG0780037371.01.T01:exon | 35.0% | |
| TTGTAGATCAAACCTCTGAA+TGG | + | Chr7:24504989-24505008 | MsG0780037371.01.T01:CDS | 35.0% | |
| ! | AACTATGCTATTTAGCAGCT+AGG | - | Chr7:24504044-24504063 | None:intergenic | 35.0% |
| ! | AAGTACATTTTCTTGTACGG+AGG | + | Chr7:24505618-24505637 | MsG0780037371.01.T01:CDS | 35.0% |
| ! | ATGATTTGAGACAGTGTTGT+AGG | - | Chr7:24503526-24503545 | None:intergenic | 35.0% |
| ! | CCATGATGATAATGTTGAAG+AGG | + | Chr7:24506220-24506239 | MsG0780037371.01.T01:CDS | 35.0% |
| ! | GACATTTTACCTCTATACGA+TGG | + | Chr7:24504700-24504719 | MsG0780037371.01.T01:CDS | 35.0% |
| ! | GCAGCATTTGCTTTAAACTA+TGG | + | Chr7:24503285-24503304 | MsG0780037371.01.T01:CDS | 35.0% |
| ! | GTTTAAAGCAAATGCTGCTA+AGG | - | Chr7:24503283-24503302 | None:intergenic | 35.0% |
| ! | TGACTCGGAAATATTGAACT+GGG | + | Chr7:24505302-24505321 | MsG0780037371.01.T01:CDS | 35.0% |
| ! | TGTGAGTAAAGAGATTTTCG+CGG | - | Chr7:24505782-24505801 | None:intergenic | 35.0% |
| ! | TTTGAAACACCATCGTATAG+AGG | - | Chr7:24504712-24504731 | None:intergenic | 35.0% |
| ! | TTTGGTTCATACAGAGTGAA+TGG | + | Chr7:24505103-24505122 | MsG0780037371.01.T01:CDS | 35.0% |
| !! | AAGGGTCTTGTTGTATAAAC+TGG | + | Chr7:24506411-24506430 | MsG0780037371.01.T01:three_prime_UTR | 35.0% |
| !! | ACACTGATTCTATACATCGA+TGG | + | Chr7:24504430-24504449 | MsG0780037371.01.T01:intron | 35.0% |
| !! | AGCATTGGCCTAATTTAAGA+TGG | + | Chr7:24504560-24504579 | MsG0780037371.01.T01:intron | 35.0% |
| !! | CAGTTCTGAACATGATTCAA+CGG | + | Chr7:24502767-24502786 | MsG0780037371.01.T01:CDS | 35.0% |
| !! | CTGGTCTATTAGAAGTATTG+TGG | + | Chr7:24503563-24503582 | MsG0780037371.01.T01:CDS | 35.0% |
| !! | CTTTAGACTAAAGCACTGTT+TGG | + | Chr7:24503677-24503696 | MsG0780037371.01.T01:intron | 35.0% |
| !! | GACTTGTTTCAGTTGGATTT+TGG | - | Chr7:24505865-24505884 | None:intergenic | 35.0% |
| !! | TTGACTCGGAAATATTGAAC+TGG | + | Chr7:24505301-24505320 | MsG0780037371.01.T01:CDS | 35.0% |
| !!! | TAAGCCGATTCTTGTTGTTT+TGG | + | Chr7:24505137-24505156 | MsG0780037371.01.T01:CDS | 35.0% |
| !!! | TTGTTGTTTTGGATCCACAA+GGG | + | Chr7:24505148-24505167 | MsG0780037371.01.T01:CDS | 35.0% |
| AAAGATCATGCTGAACGAGT+TGG | + | Chr7:24506038-24506057 | MsG0780037371.01.T01:CDS | 40.0% | |
| AACCACATTGCTGCATTCAT+TGG | + | Chr7:24505409-24505428 | MsG0780037371.01.T01:intron | 40.0% | |
| AATCATGTTCAGAACTGCTG+AGG | - | Chr7:24502764-24502783 | None:intergenic | 40.0% | |
| ACATCATAATCAAGTCCCTC+AGG | - | Chr7:24502696-24502715 | None:intergenic | 40.0% | |
| ACTCATAACCAAGTGTAGTG+AGG | - | Chr7:24503611-24503630 | None:intergenic | 40.0% | |
| ACTGCCTTGCTTATCAATGA+AGG | - | Chr7:24505081-24505100 | None:intergenic | 40.0% | |
| AGACTTGAATTGCTTGTCGA+TGG | + | Chr7:24505276-24505295 | MsG0780037371.01.T01:CDS | 40.0% | |
| AGATTGAGACAGAGAAGAGA+TGG | - | Chr7:24502513-24502532 | None:intergenic | 40.0% | |
| AGCAAAAGGGTCACAAATTG+TGG | + | Chr7:24505959-24505978 | MsG0780037371.01.T01:CDS | 40.0% | |
| AGTTCTCACATTCAATGGGA+AGG | + | Chr7:24506129-24506148 | MsG0780037371.01.T01:CDS | 40.0% | |
| AGTTGCAGATCATAATCCTG+AGG | + | Chr7:24502677-24502696 | MsG0780037371.01.T01:CDS | 40.0% | |
| ATCATGTTCAGAACTGCTGA+GGG | - | Chr7:24502763-24502782 | None:intergenic | 40.0% | |
| ATCTTCATGTTGTCAGTGTG+TGG | - | Chr7:24504652-24504671 | None:intergenic | 40.0% | |
| ATGCAACAACTGATGAAAGG+TGG | + | Chr7:24502600-24502619 | MsG0780037371.01.T01:CDS | 40.0% | |
| ATTACAAGCCTCACTACACT+TGG | + | Chr7:24503600-24503619 | MsG0780037371.01.T01:CDS | 40.0% | |
| CATTGGAGGAATGAATGCTA+TGG | + | Chr7:24505426-24505445 | MsG0780037371.01.T01:intron | 40.0% | |
| CCGATCAATCTTAACAGACA+AGG | - | Chr7:24503070-24503089 | None:intergenic | 40.0% | |
| CTAAACACAACTTCGGAACA+TGG | + | Chr7:24505508-24505527 | MsG0780037371.01.T01:intron | 40.0% | |
| CTACAAGTGGGATGTTAAGT+TGG | + | Chr7:24503251-24503270 | MsG0780037371.01.T01:CDS | 40.0% | |
| CTCAAATATTGCGACTGTTG+TGG | - | Chr7:24503220-24503239 | None:intergenic | 40.0% | |
| CTTCACCTCTAATGATGCTT+GGG | + | Chr7:24504109-24504128 | MsG0780037371.01.T01:CDS | 40.0% | |
| CTTCTTAGCTACGACAAACA+AGG | + | Chr7:24505921-24505940 | MsG0780037371.01.T01:CDS | 40.0% | |
| GAAATGGATACCGAAGCTTA+TGG | + | Chr7:24504601-24504620 | MsG0780037371.01.T01:CDS | 40.0% | |
| GAACCAACTTGCAAAATCGA+TGG | + | Chr7:24503341-24503360 | MsG0780037371.01.T01:CDS | 40.0% | |
| GATTGATCGGATTTCTTGTG+AGG | + | Chr7:24503080-24503099 | MsG0780037371.01.T01:CDS | 40.0% | |
| GCTATGCAACAACTGATGAA+AGG | + | Chr7:24502597-24502616 | MsG0780037371.01.T01:CDS | 40.0% | |
| GCTGTCAGTTATAAGTTCGT+CGG | + | Chr7:24503959-24503978 | MsG0780037371.01.T01:intron | 40.0% | |
| GGTCAGAACAAAGCATGATA+TGG | + | Chr7:24505805-24505824 | MsG0780037371.01.T01:CDS | 40.0% | |
| GGTTGGATTGTTCTAGCAAA+AGG | + | Chr7:24505945-24505964 | MsG0780037371.01.T01:CDS | 40.0% | |
| GTTGCAGATCATAATCCTGA+GGG | + | Chr7:24502678-24502697 | MsG0780037371.01.T01:CDS | 40.0% | |
| TAAGCAGTTACCTGGTATCA+TGG | + | Chr7:24503371-24503390 | MsG0780037371.01.T01:CDS | 40.0% | |
| TCAGAAATTCGAGGACTAGA+CGG | - | Chr7:24502901-24502920 | None:intergenic | 40.0% | |
| TCTCAAACAACGACAATGTC+AGG | + | Chr7:24504354-24504373 | MsG0780037371.01.T01:intron | 40.0% | |
| TCTTCACCTCTAATGATGCT+TGG | + | Chr7:24504108-24504127 | MsG0780037371.01.T01:CDS | 40.0% | |
| TGATAAGCAAGGCAGTTGTT+TGG | + | Chr7:24505085-24505104 | MsG0780037371.01.T01:CDS | 40.0% | |
| TGATACCAGGTAACTGCTTA+AGG | - | Chr7:24503371-24503390 | None:intergenic | 40.0% | |
| TGGTTGAGTATGATCTCATG+TGG | + | Chr7:24506015-24506034 | MsG0780037371.01.T01:CDS | 40.0% | |
| TGGTTTCGAAACAGCTTTCA+AGG | + | Chr7:24506058-24506077 | MsG0780037371.01.T01:CDS | 40.0% | |
| ! | CCCTTCTTTTAGTCTCTGTT+TGG | - | Chr7:24504002-24504021 | None:intergenic | 40.0% |
| ! | CTGATTCGACAGATTAAGGA+AGG | + | Chr7:24505594-24505613 | MsG0780037371.01.T01:intron | 40.0% |
| ! | GAATGCAGCAATGTGGTTTT+GGG | - | Chr7:24505407-24505426 | None:intergenic | 40.0% |
| ! | TGAATGCAGCAATGTGGTTT+TGG | - | Chr7:24505408-24505427 | None:intergenic | 40.0% |
| !! | ATGACTAGCATTGGCAAGTT+AGG | + | Chr7:24502573-24502592 | MsG0780037371.01.T01:CDS | 40.0% |
| !! | GTCTTCAAGTTGATCAACAC+TGG | - | Chr7:24503010-24503029 | None:intergenic | 40.0% |
| !! | TGTCATCGACTTGTTTCAGT+TGG | - | Chr7:24505872-24505891 | None:intergenic | 40.0% |
| !! | TTTTGGAGAAGAGCATGCTT+TGG | - | Chr7:24505848-24505867 | None:intergenic | 40.0% |
| !!! | CTTGTTGTTTTGGATCCACA+AGG | + | Chr7:24505147-24505166 | MsG0780037371.01.T01:CDS | 40.0% |
| AAACAAACAGGTGAGCCTTG+AGG | + | Chr7:24504822-24504841 | MsG0780037371.01.T01:intron | 45.0% | |
| AAGCTCCCAAGCATCATTAG+AGG | - | Chr7:24504117-24504136 | None:intergenic | 45.0% | |
| ATAGACCAGTATGCAGCAAC+TGG | - | Chr7:24503552-24503571 | None:intergenic | 45.0% | |
| ATATCCCAGTTGCTGCATAC+TGG | + | Chr7:24503544-24503563 | MsG0780037371.01.T01:CDS | 45.0% | |
| ATGCATATTCCGACGACACT+CGG | - | Chr7:24506177-24506196 | None:intergenic | 45.0% | |
| CACATTGCTGCATTCATTGG+AGG | + | Chr7:24505412-24505431 | MsG0780037371.01.T01:intron | 45.0% | |
| CCGTAGCAATCCATAAGCTT+CGG | - | Chr7:24504614-24504633 | None:intergenic | 45.0% | |
| CCTACGTATACCATCTCTAG+CGG | - | Chr7:24505711-24505730 | None:intergenic | 45.0% | |
| CTCCAATGAATGCAGCAATG+TGG | - | Chr7:24505414-24505433 | None:intergenic | 45.0% | |
| CTTAGCTACGACAAACAAGG+CGG | + | Chr7:24505924-24505943 | MsG0780037371.01.T01:CDS | 45.0% | |
| CTTGAATGCTCCATGATACC+AGG | - | Chr7:24503384-24503403 | None:intergenic | 45.0% | |
| GACAGAGAAGAGATGGTGAT+TGG | - | Chr7:24502506-24502525 | None:intergenic | 45.0% | |
| GGATCATCTCAGAAAGCAAC+TGG | + | Chr7:24504169-24504188 | MsG0780037371.01.T01:CDS | 45.0% | |
| GGATGATACACCGAAAACCA+CGG | - | Chr7:24505060-24505079 | None:intergenic | 45.0% | |
| GGGCTATGCAATAAACTGCA+TGG | - | Chr7:24506337-24506356 | None:intergenic | 45.0% | |
| GGGTCACAAATTGTGGTCAA+TGG | + | Chr7:24505966-24505985 | MsG0780037371.01.T01:CDS | 45.0% | |
| GTCAATGGACATGCTTCAAC+TGG | + | Chr7:24505981-24506000 | MsG0780037371.01.T01:CDS | 45.0% | |
| TAGACCAGTATGCAGCAACT+GGG | - | Chr7:24503551-24503570 | None:intergenic | 45.0% | |
| TGCTTGGGAGCTTTCAACAT+TGG | + | Chr7:24504124-24504143 | MsG0780037371.01.T01:CDS | 45.0% | |
| ! | ATCATGGCAGCACTGAAAAG+TGG | - | Chr7:24506207-24506226 | None:intergenic | 45.0% |
| ! | CCGAAGCTTATGGATTGCTA+CGG | + | Chr7:24504611-24504630 | MsG0780037371.01.T01:CDS | 45.0% |
| ! | CGAAGCTTATGGATTGCTAC+GGG | + | Chr7:24504612-24504631 | MsG0780037371.01.T01:CDS | 45.0% |
| ! | CTCTTTGGAAGGATGAGACT+TGG | + | Chr7:24505253-24505272 | MsG0780037371.01.T01:CDS | 45.0% |
| ! | CTTTTGGTCTGTCCATTCAG+AGG | - | Chr7:24505004-24505023 | None:intergenic | 45.0% |
| !! | AGAGAGTATGCCGTGGTTTT+CGG | + | Chr7:24505047-24505066 | MsG0780037371.01.T01:CDS | 45.0% |
| !! | GACTAAAGCACTGTTTGGCA+AGG | + | Chr7:24503682-24503701 | MsG0780037371.01.T01:intron | 45.0% |
| !! | TGTTTTGGATCCACAAGGGA+GGG | + | Chr7:24505152-24505171 | MsG0780037371.01.T01:CDS | 45.0% |
| !!! | TCGCCATCGATTTTGCAAGT+TGG | - | Chr7:24503347-24503366 | None:intergenic | 45.0% |
| !!! | TTGTTTTGGATCCACAAGGG+AGG | + | Chr7:24505151-24505170 | MsG0780037371.01.T01:CDS | 45.0% |
| ACATGCTTGTGTAGGCAGGA+AGG | - | Chr7:24503041-24503060 | None:intergenic | 50.0% | |
| AGAAGCCCGAAAAGTAGCAC+AGG | + | Chr7:24505674-24505693 | MsG0780037371.01.T01:CDS | 50.0% | |
| CCGCTAGAGATGGTATACGT+AGG | + | Chr7:24505708-24505727 | MsG0780037371.01.T01:CDS | 50.0% | |
| GCGATCCTTAAGCAGTTACC+TGG | + | Chr7:24503363-24503382 | MsG0780037371.01.T01:CDS | 50.0% | |
| TCCAACATGCTTGTGTAGGC+AGG | - | Chr7:24503045-24503064 | None:intergenic | 50.0% | |
| TCCTGCCTACACAAGCATGT+TGG | + | Chr7:24503041-24503060 | MsG0780037371.01.T01:CDS | 50.0% | |
| TCTTCCTTCTCAGTGCCTCA+AGG | - | Chr7:24504840-24504859 | None:intergenic | 50.0% | |
| TGCATATTCCGACGACACTC+GGG | - | Chr7:24506176-24506195 | None:intergenic | 50.0% | |
| TGCCTACACAAGCATGTTGG+AGG | + | Chr7:24503044-24503063 | MsG0780037371.01.T01:CDS | 50.0% | |
| ! | ATCTGAGAGAGAGTATGCCG+TGG | + | Chr7:24505040-24505059 | MsG0780037371.01.T01:CDS | 50.0% |
| !! | GCTTGTCGATGGCATTGACT+CGG | + | Chr7:24505287-24505306 | MsG0780037371.01.T01:CDS | 50.0% |
| !!! | GTGTCGCCTGTGCTACTTTT+CGG | - | Chr7:24505683-24505702 | None:intergenic | 50.0% |
| !!! | TGTCGCCTGTGCTACTTTTC+GGG | - | Chr7:24505682-24505701 | None:intergenic | 50.0% |
| GACACGTACACCGCTAGAGA+TGG | + | Chr7:24505698-24505717 | MsG0780037371.01.T01:CDS | 55.0% | |
| GCATATTCCGACGACACTCG+GGG | - | Chr7:24506175-24506194 | None:intergenic | 55.0% | |
| GCTACGACAAACAAGGCGGT+TGG | + | Chr7:24505928-24505947 | MsG0780037371.01.T01:CDS | 55.0% | |
| GGCCTCCAACATGCTTGTGT+AGG | - | Chr7:24503049-24503068 | None:intergenic | 55.0% | |
| ! | GCTCGTCGGTTGAGAACTCT+AGG | - | Chr7:24504885-24504904 | None:intergenic | 55.0% |
| !! | TGAGCCTTGAGGCACTGAGA+AGG | + | Chr7:24504833-24504852 | MsG0780037371.01.T01:CDS | 55.0% |
| ACGGAGGAGACGACCCTGAA+TGG | + | Chr7:24505634-24505653 | MsG0780037371.01.T01:CDS | 60.0% | |
| GGGCAAGCAACCCTCCCTTG+TGG | - | Chr7:24505165-24505184 | None:intergenic | 65.0% | |
| TCGGGGCACGTGAGTCGATC+AGG | - | Chr7:24506158-24506177 | None:intergenic | 65.0% | |
| ! | TCACGTGCCCCGAGTGTCGT+CGG | + | Chr7:24506165-24506184 | MsG0780037371.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 24502494 | 24506474 | 24502494 | ID=MsG0780037371.01;Name=MsG0780037371.01 |
| Chr7 | mRNA | 24502494 | 24506474 | 24502494 | ID=MsG0780037371.01.T01;Parent=MsG0780037371.01;Name=MsG0780037371.01.T01;_AED=0.19;_eAED=0.19;_QI=79|1|1|1|1|1|7|191|729 |
| Chr7 | exon | 24505606 | 24506474 | 24505606 | ID=MsG0780037371.01.T01:exon:5246;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24504832 | 24505323 | 24504832 | ID=MsG0780037371.01.T01:exon:5245;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24504596 | 24504738 | 24504596 | ID=MsG0780037371.01.T01:exon:5244;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24504106 | 24504212 | 24504106 | ID=MsG0780037371.01.T01:exon:5243;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24503180 | 24503628 | 24503180 | ID=MsG0780037371.01.T01:exon:5242;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24502997 | 24503101 | 24502997 | ID=MsG0780037371.01.T01:exon:5241;Parent=MsG0780037371.01.T01 |
| Chr7 | exon | 24502494 | 24502788 | 24502494 | ID=MsG0780037371.01.T01:exon:5240;Parent=MsG0780037371.01.T01 |
| Chr7 | five_prime_UTR | 24502494 | 24502572 | 24502494 | ID=MsG0780037371.01.T01:five_prime_utr;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24502573 | 24502788 | 24502573 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24502997 | 24503101 | 24502997 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24503180 | 24503628 | 24503180 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24504106 | 24504212 | 24504106 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24504596 | 24504738 | 24504596 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24504832 | 24505323 | 24504832 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | CDS | 24505606 | 24506283 | 24505606 | ID=MsG0780037371.01.T01:cds;Parent=MsG0780037371.01.T01 |
| Chr7 | three_prime_UTR | 24506284 | 24506474 | 24506284 | ID=MsG0780037371.01.T01:three_prime_utr;Parent=MsG0780037371.01.T01 |
| Gene Sequence |
| Protein sequence |
