AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043477.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043477.01.T01 MTR_7g065100 95.918 98 2 1 139 234 2 99 2.33e-60 185
MsG0880043477.01.T01 MTR_8g036205 94.118 85 3 1 139 221 2 86 7.93e-48 154
MsG0880043477.01.T01 MTR_4g083040 51.852 135 64 1 3 136 45 179 2.73e-41 139
MsG0880043477.01.T01 MTR_4g006390 46.528 144 38 3 2 143 28 134 5.56e-34 120
MsG0880043477.01.T01 MTR_1g064650 40.146 137 44 1 2 138 216 314 9.71e-26 102
MsG0880043477.01.T01 MTR_1g100190 72.881 59 16 0 3 61 29 87 2.23e-22 89.4
MsG0880043477.01.T01 MTR_2g438230 47.126 87 39 2 2 88 178 257 8.45e-19 82.8
MsG0880043477.01.T01 MTR_3g456010 55.738 61 27 0 76 136 273 333 1.21e-16 77.8
MsG0880043477.01.T01 MTR_0251s0060 50.495 101 49 1 39 138 240 340 2.56e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043477.01.T01 AT2G03870 90.625 96 7 1 139 232 2 97 1.16e-55 173
MsG0880043477.01.T01 AT2G03870 90.625 96 7 1 139 232 2 97 1.16e-55 173

Find 101 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTAAATATGCATAATTT+TGG 0.181850 8:+25356252 None:intergenic
GTAGTGACAGGTACTCTAAA+AGG 0.295589 8:-25358539 MsG0880043477.01.T01:intron
TTAGCAAAATTTGTTGATAA+AGG 0.301879 8:-25360576 MsG0880043477.01.T01:CDS
ACATGTCGTGGAGCCATTCT+AGG 0.318714 8:-25362866 MsG0880043477.01.T01:CDS
TTGTCGCAATGCAGGTTTGC+AGG 0.321708 8:-25356658 MsG0880043477.01.T01:intron
TACAATTAAGCCAAGACTTC+TGG 0.324979 8:+25357331 None:intergenic
GGTGTTCAAGTCAAGCTTAC+TGG 0.353916 8:-25360555 MsG0880043477.01.T01:CDS
GGCGGTGGCTATGGCCTTCA+TGG 0.361560 8:-25362943 MsG0880043477.01.T01:CDS
ATACCTTCTATGTTGCTAAC+CGG 0.362506 8:-25356535 MsG0880043477.01.T01:three_prime_UTR
TTGGTCAAACACGGTATAAT+CGG 0.389687 8:+25362587 None:intergenic
TCTTGAGGCAGATGGGGCCT+AGG 0.394260 8:-25356576 MsG0880043477.01.T01:exon
CCAGGACAAGGTTAAGTAAC+TGG 0.396790 8:+25358510 None:intergenic
CCATGCCTCCTGCAGACATT+GGG 0.423223 8:-25362980 MsG0880043477.01.T01:CDS
AACCCCTTTCTTGAGGCAGA+TGG 0.424251 8:-25356584 MsG0880043477.01.T01:CDS
TGCTCAAGAGGCGGTGGCTA+TGG 0.425870 8:-25362952 MsG0880043477.01.T01:CDS
CCCATGCCTCCTGCAGACAT+TGG 0.426310 8:-25362981 MsG0880043477.01.T01:CDS
TGGGCATCAGCTGTGTAGTT+AGG 0.426397 8:+25362783 None:intergenic
TGGGAGGAAAGAAACTGTTC+TGG 0.428213 8:-25360601 MsG0880043477.01.T01:CDS
CCAGCAGGAGAGGGGTGATC+TGG 0.431749 8:-25362898 MsG0880043477.01.T01:CDS
GAATGGATTGAGAGGATGTT+TGG 0.432123 8:+25362710 None:intergenic
GGAGAGGGGTGATCTGGTTC+CGG 0.434335 8:-25362892 MsG0880043477.01.T01:CDS
ACCCCTTTCTTGAGGCAGAT+GGG 0.434443 8:-25356583 MsG0880043477.01.T01:CDS
GCCCCATCTGCCTCAAGAAA+GGG 0.437926 8:+25356581 None:intergenic
CTCTTATGTTGTCGATGATC+TGG 0.448232 8:+25362688 None:intergenic
TAGTTAGGAACGGCCGAGGG+GGG 0.468586 8:+25362798 None:intergenic
AGGTTATTGTTGAGCAGCAA+TGG 0.473759 8:-25362734 MsG0880043477.01.T01:CDS
ACTTGTCCAGATTCTTAAGA+AGG 0.477205 8:+25356308 None:intergenic
CCCAATGTCTGCAGGAGGCA+TGG 0.478576 8:+25362980 None:intergenic
CAGATCATCGACAACATAAG+AGG 0.482319 8:-25362687 MsG0880043477.01.T01:CDS
GGCCCCATCTGCCTCAAGAA+AGG 0.483618 8:+25356580 None:intergenic
CCCCTTTCTTGAGGCAGATG+GGG 0.490206 8:-25356582 MsG0880043477.01.T01:CDS
CCAGATCACCCCTCTCCTGC+TGG 0.496363 8:+25362898 None:intergenic
CATGTCGTGGAGCCATTCTA+GGG 0.498352 8:-25362865 MsG0880043477.01.T01:CDS
GGTTATTGTTGAGCAGCAAT+GGG 0.501052 8:-25362733 MsG0880043477.01.T01:CDS
GCCTCTTGCTCAAGAGGCGG+TGG 0.502871 8:-25362958 MsG0880043477.01.T01:CDS
CATTGGGCCTCTTGCTCAAG+AGG 0.506387 8:-25362964 MsG0880043477.01.T01:CDS
CCAGTTACTTAACCTTGTCC+TGG 0.506664 8:-25358510 MsG0880043477.01.T01:CDS
CACCCCTCTCCTGCTGGCTA+AGG 0.508657 8:+25362904 None:intergenic
GACCCGGTTAGCAACATAGA+AGG 0.513840 8:+25356532 None:intergenic
ACCTCCTCGTAAGGAGGGAC+AGG 0.513927 8:+25362753 None:intergenic
AAAGTAAAGTGTTAATACAT+AGG 0.514292 8:+25356457 None:intergenic
TGTCCTTAGCCAGCAGGAGA+GGG 0.517198 8:-25362907 MsG0880043477.01.T01:CDS
AAGGAGGGACAGGACGAGGA+TGG 0.518244 8:+25362763 None:intergenic
AGTGGATTTGAAACCACATC+AGG 0.518631 8:+25362639 None:intergenic
TGTCGCAATGCAGGTTTGCA+GGG 0.521696 8:-25356657 MsG0880043477.01.T01:intron
AGTTAGGAACGGCCGAGGGG+GGG 0.521830 8:+25362799 None:intergenic
TACCTTCTATGTTGCTAACC+GGG 0.523052 8:-25356534 MsG0880043477.01.T01:three_prime_UTR
CCAATGTCTGCAGGAGGCAT+GGG 0.526348 8:+25362981 None:intergenic
TGGCTCCACGACATGTCATC+CGG 0.529325 8:+25362873 None:intergenic
TAGTGACAGGTACTCTAAAA+GGG 0.532671 8:-25358538 MsG0880043477.01.T01:intron
GCAAGAGGCCCAATGTCTGC+AGG 0.535774 8:+25362972 None:intergenic
AGGCCGAGTGGAGCATGGAA+TGG 0.540236 8:-25362667 MsG0880043477.01.T01:CDS
GTGTAGTTAGGAACGGCCGA+GGG 0.541933 8:+25362795 None:intergenic
TGTGTAGTTAGGAACGGCCG+AGG 0.544273 8:+25362794 None:intergenic
ACAGATCAGACCAGAAGTCT+TGG 0.544721 8:-25357341 MsG0880043477.01.T01:CDS
AAGCTTACTGGTGGCAGACA+AGG 0.544738 8:-25360543 MsG0880043477.01.T01:intron
AACCATCATTGTGATCTACT+TGG 0.547967 8:-25356492 MsG0880043477.01.T01:three_prime_UTR
TCGTAAGGAGGGACAGGACG+AGG 0.548334 8:+25362759 None:intergenic
GCCACCGCCTCTTGAGCAAG+AGG 0.549774 8:+25362957 None:intergenic
TCTGCATGTCCTTAGCCAGC+AGG 0.549932 8:-25362913 MsG0880043477.01.T01:CDS
AGGAGGGACAGGACGAGGAT+GGG 0.551103 8:+25362764 None:intergenic
AAAACTCAACAGCTTCATCC+AGG 0.561824 8:+25358492 None:intergenic
TATAATGCGAGTTCAGATGC+TGG 0.562375 8:-25356386 MsG0880043477.01.T01:three_prime_UTR
GTAGTTAGGAACGGCCGAGG+GGG 0.562665 8:+25362797 None:intergenic
ATGTCCTTAGCCAGCAGGAG+AGG 0.567832 8:-25362908 MsG0880043477.01.T01:CDS
ATAAGAGGCCGAGTGGAGCA+TGG 0.568097 8:-25362672 MsG0880043477.01.T01:CDS
TACCAAGTAGATCACAATGA+TGG 0.584310 8:+25356490 None:intergenic
ATGCTTGTGTCGCCAACTGA+TGG 0.586363 8:-25356623 MsG0880043477.01.T01:CDS
TGGGCCTCTTGCTCAAGAGG+CGG 0.586590 8:-25362961 MsG0880043477.01.T01:CDS
GTCGCAATGCAGGTTTGCAG+GGG 0.591955 8:-25356656 MsG0880043477.01.T01:intron
TTATACACACATTTACACCT+AGG 0.592919 8:+25356559 None:intergenic
TCAACAATAACCTCCTCGTA+AGG 0.597440 8:+25362744 None:intergenic
TGGTTCCGGATGACATGTCG+TGG 0.598514 8:-25362878 MsG0880043477.01.T01:CDS
TGTGTCGCCAACTGATGGTA+CGG 0.598668 8:-25356618 MsG0880043477.01.T01:CDS
ACAATAACCTCCTCGTAAGG+AGG 0.599343 8:+25362747 None:intergenic
CAAACACGGTATAATCGGAC+AGG 0.599541 8:+25362592 None:intergenic
CAATAACCTCCTCGTAAGGA+GGG 0.600657 8:+25362748 None:intergenic
ATCAGCTGTGTAGTTAGGAA+CGG 0.603239 8:+25362788 None:intergenic
TCTCCATTCCATGCTCCACT+CGG 0.609421 8:+25362664 None:intergenic
ATGTTGTCGATGATCTGGAA+TGG 0.612740 8:+25362693 None:intergenic
GATTGCGAACCCCTTTCTTG+AGG 0.613579 8:-25356591 MsG0880043477.01.T01:CDS
ATCTCGTCCGTACCATCAGT+TGG 0.614027 8:+25356611 None:intergenic
TGTAGTTAGGAACGGCCGAG+GGG 0.615063 8:+25362796 None:intergenic
GTCCTTAGCCAGCAGGAGAG+GGG 0.620541 8:-25362906 MsG0880043477.01.T01:CDS
CCCCATCTGCCTCAAGAAAG+GGG 0.629232 8:+25356582 None:intergenic
TCGTCCTGTCCCTCCTTACG+AGG 0.630490 8:-25362757 MsG0880043477.01.T01:CDS
TCCTGTCCCTCCTTACGAGG+AGG 0.632420 8:-25362754 MsG0880043477.01.T01:CDS
ATGCAGAGCAAACTCCATGA+AGG 0.638320 8:+25362929 None:intergenic
AGCCGACACTTGGTCAAACA+CGG 0.642236 8:+25362578 None:intergenic
TGGAATGGAGATTCCTGATG+TGG 0.645659 8:-25362652 MsG0880043477.01.T01:CDS
AAGTAGATCACAATGATGGT+TGG 0.646184 8:+25356494 None:intergenic
CAACAGCTTCATCCAGGACA+AGG 0.654174 8:+25358498 None:intergenic
CGACAACATAAGAGGCCGAG+TGG 0.660932 8:-25362679 MsG0880043477.01.T01:CDS
ATGTCGTGGAGCCATTCTAG+GGG 0.662228 8:-25362864 MsG0880043477.01.T01:CDS
ACACGGTATAATCGGACAGG+AGG 0.663906 8:+25362595 None:intergenic
AGAGGCCCAATGTCTGCAGG+AGG 0.667863 8:+25362975 None:intergenic
GTTCAAGTCAAGCTTACTGG+TGG 0.669583 8:-25360552 MsG0880043477.01.T01:CDS
GTAACTAAAATGACGAGACC+CGG 0.671166 8:+25356516 None:intergenic
ATAATGCGAGTTCAGATGCT+GGG 0.671997 8:-25356385 MsG0880043477.01.T01:three_prime_UTR
ATGATCTGGAATGGATTGAG+AGG 0.675476 8:+25362702 None:intergenic
TGTCGTGGAGCCATTCTAGG+GGG 0.729355 8:-25362863 MsG0880043477.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAGGAATAAAATAA+CGG + Chr8:25356814-25356833 None:intergenic 10.0%
!! AAATAAAATAAAAAAGAGAA+AGG + Chr8:25358720-25358739 None:intergenic 10.0%
!! AATTAAATTACGAAAAATAA+AGG + Chr8:25356827-25356846 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAAACA+TGG + Chr8:25360787-25360806 None:intergenic 10.0%
!! TAAAATAAAGAAAAGAAATT+AGG + Chr8:25358591-25358610 None:intergenic 10.0%
!! TTGATTTAACAATAAATTTA+AGG - Chr8:25359335-25359354 MsG0880043477.01.T01:intron 10.0%
!!! AAATTAAATATGCATAATTT+TGG + Chr8:25362973-25362992 None:intergenic 10.0%
!!! AAATTTTTTTATTCAAAAGA+TGG + Chr8:25359687-25359706 None:intergenic 10.0%
!! TAAAGATGTTCATAATATAT+AGG - Chr8:25358058-25358077 MsG0880043477.01.T01:intron 15.0%
!! TATTTATTTCAATGTGTTAT+AGG + Chr8:25360936-25360955 None:intergenic 15.0%
!! TTTAAGAAAATGAAAATGTT+TGG + Chr8:25359562-25359581 None:intergenic 15.0%
!!! AAATGTTTTCTTATTTGTTT+TGG - Chr8:25361370-25361389 MsG0880043477.01.T01:intron 15.0%
!!! ACTTAGACTTTAAAAAAATA+TGG - Chr8:25358168-25358187 MsG0880043477.01.T01:intron 15.0%
!!! CAAAATTCATATATTTGTTT+TGG + Chr8:25362489-25362508 None:intergenic 15.0%
!!! GTTTTTTTTGTTTTGTTTTA+AGG - Chr8:25360069-25360088 MsG0880043477.01.T01:intron 15.0%
!!! TTATGTTTTTAAAAAAGAGA+AGG + Chr8:25361938-25361957 None:intergenic 15.0%
!!! TTGATTTGCTTTTAATATTA+TGG - Chr8:25359829-25359848 MsG0880043477.01.T01:intron 15.0%
!!! TTTATTTTATTTTTCAGTCT+GGG - Chr8:25358602-25358621 MsG0880043477.01.T01:intron 15.0%
!!! TTTGTTTTTGAAGAAAAAAA+GGG - Chr8:25361024-25361043 MsG0880043477.01.T01:intron 15.0%
!! AAACAAAAAAAACATACACA+AGG + Chr8:25360062-25360081 None:intergenic 20.0%
!! AAACCTTGTTAAAATATAGA+AGG - Chr8:25361085-25361104 MsG0880043477.01.T01:intron 20.0%
!! AAAGTAAACATTGAAGATTA+TGG + Chr8:25360624-25360643 None:intergenic 20.0%
!! AAATACAGTTTGTATAGAAA+GGG - Chr8:25360951-25360970 MsG0880043477.01.T01:intron 20.0%
!! AACAAAAAAAATGTCAACTT+AGG + Chr8:25361189-25361208 None:intergenic 20.0%
!! AATGTAAAATGATACATGTT+TGG - Chr8:25359295-25359314 MsG0880043477.01.T01:intron 20.0%
!! AGAATTGAATTTATGATGTT+TGG + Chr8:25359450-25359469 None:intergenic 20.0%
!! ATTAAAGCTAAATATACACA+AGG + Chr8:25361478-25361497 None:intergenic 20.0%
!! ATTCCTTATTGATAAAACAT+TGG - Chr8:25362009-25362028 MsG0880043477.01.T01:intron 20.0%
!! CAATAAACATAAAGTAAGTT+TGG + Chr8:25360527-25360546 None:intergenic 20.0%
!! CGAAAATCAATATCAATTAA+CGG + Chr8:25357405-25357424 None:intergenic 20.0%
!! GAATTGAATTTATGATGTTT+GGG + Chr8:25359449-25359468 None:intergenic 20.0%
!! TAAATACAGTTTGTATAGAA+AGG - Chr8:25360950-25360969 MsG0880043477.01.T01:intron 20.0%
!! TATTGATAAAACATTGGAAA+TGG - Chr8:25362015-25362034 MsG0880043477.01.T01:intron 20.0%
!! TGGATACATTCATATAAATA+GGG - Chr8:25358792-25358811 MsG0880043477.01.T01:intron 20.0%
!! TTAAAGCTAAATATACACAA+GGG + Chr8:25361477-25361496 None:intergenic 20.0%
!! TTGGATACATTCATATAAAT+AGG - Chr8:25358791-25358810 MsG0880043477.01.T01:intron 20.0%
!! TTTATATTACTTAAATAGGC+CGG + Chr8:25357795-25357814 None:intergenic 20.0%
!!! AAAATAAAACACATGGATTT+TGG + Chr8:25361828-25361847 None:intergenic 20.0%
!!! AAAGTAAAGTGTTAATACAT+AGG + Chr8:25362768-25362787 None:intergenic 20.0%
!!! AAATGAGAGATATTCTAAAA+AGG - Chr8:25360385-25360404 MsG0880043477.01.T01:intron 20.0%
!!! AACAAATATATGAATTTTGC+TGG - Chr8:25362490-25362509 MsG0880043477.01.T01:intron 20.0%
!!! ACAAATATATGAATTTTGCT+GGG - Chr8:25362491-25362510 MsG0880043477.01.T01:intron 20.0%
!!! AGCTTTTTATCTGAAATAAT+TGG - Chr8:25360128-25360147 MsG0880043477.01.T01:intron 20.0%
!!! ATAATTGATTTTGACATGTT+TGG + Chr8:25359512-25359531 None:intergenic 20.0%
!!! ATTTTTTTAAAGTCTAAGTC+TGG + Chr8:25358167-25358186 None:intergenic 20.0%
!!! CATCTTTCCTTTATAAATTT+TGG - Chr8:25360882-25360901 MsG0880043477.01.T01:intron 20.0%
!!! CGTTAATTGATATTGATTTT+CGG - Chr8:25357403-25357422 MsG0880043477.01.T01:intron 20.0%
!!! CTTTATTTTATTTTTCAGTC+TGG - Chr8:25358601-25358620 MsG0880043477.01.T01:intron 20.0%
!!! CTTTGTTTTTGAAGAAAAAA+AGG - Chr8:25361023-25361042 MsG0880043477.01.T01:intron 20.0%
!!! GCTTTTTATCTGAAATAATT+GGG - Chr8:25360129-25360148 MsG0880043477.01.T01:intron 20.0%
!!! TAAATATGCATAATTTTGGA+AGG + Chr8:25362969-25362988 None:intergenic 20.0%
!!! TAATATATAGGCTTTTAAAC+AGG - Chr8:25358070-25358089 MsG0880043477.01.T01:intron 20.0%
!!! TCTTATCATTAAATTGATTC+TGG - Chr8:25358751-25358770 MsG0880043477.01.T01:intron 20.0%
!!! TGTATTAACACTTTACTTTT+TGG - Chr8:25362769-25362788 MsG0880043477.01.T01:CDS 20.0%
!!! TTAGCAAAATTTGTTGATAA+AGG - Chr8:25358646-25358665 MsG0880043477.01.T01:intron 20.0%
!!! TTATGGATATTCTTATTTGT+AGG - Chr8:25359846-25359865 MsG0880043477.01.T01:intron 20.0%
!!! TTTCCAATGTTTTATCAATA+AGG + Chr8:25362015-25362034 None:intergenic 20.0%
!!! TTTCCTTCTATATTTTAACA+AGG + Chr8:25361091-25361110 None:intergenic 20.0%
! AAAAAAAAAAAACATGGAGC+TGG + Chr8:25360781-25360800 None:intergenic 25.0%
! AAAATGAAAATGTTTGGATG+AGG + Chr8:25359556-25359575 None:intergenic 25.0%
! AAAGTTCATCTAATTCATTC+AGG - Chr8:25360983-25361002 MsG0880043477.01.T01:intron 25.0%
! AAATGAAAATGTTTGGATGA+GGG + Chr8:25359555-25359574 None:intergenic 25.0%
! AAGGAAGGAATGAAAAATTT+AGG - Chr8:25356906-25356925 MsG0880043477.01.T01:intron 25.0%
! AAGTAAGATAAATATGCGAA+AGG + Chr8:25358522-25358541 None:intergenic 25.0%
! AAGTTCATCTAATTCATTCA+GGG - Chr8:25360984-25361003 MsG0880043477.01.T01:intron 25.0%
! AATAATTGCTCTATTTGGAT+TGG - Chr8:25360266-25360285 MsG0880043477.01.T01:intron 25.0%
! AATACTTGTTTCAGAACTTA+TGG - Chr8:25360322-25360341 MsG0880043477.01.T01:intron 25.0%
! AATATTACCTAAGCACTTAA+AGG - Chr8:25361225-25361244 MsG0880043477.01.T01:intron 25.0%
! ACTACTTTGTCTTTAATCTT+GGG - Chr8:25357576-25357595 MsG0880043477.01.T01:intron 25.0%
! AGGAAGGAATGAAAAATTTA+GGG - Chr8:25356907-25356926 MsG0880043477.01.T01:intron 25.0%
! ATAATTGCTCTATTTGGATT+GGG - Chr8:25360267-25360286 MsG0880043477.01.T01:intron 25.0%
! ATATTACCTAAGCACTTAAA+GGG - Chr8:25361226-25361245 MsG0880043477.01.T01:intron 25.0%
! ATTCACTCAAAATCAATTCT+CGG + Chr8:25358861-25358880 None:intergenic 25.0%
! ATTGACACACAAAAAAAAGA+AGG + Chr8:25362891-25362910 None:intergenic 25.0%
! CAAAAACACACAAATGTAAT+AGG + Chr8:25356773-25356792 None:intergenic 25.0%
! CAAAATCAATTATACATGTG+TGG - Chr8:25359519-25359538 MsG0880043477.01.T01:intron 25.0%
! CAACATTATACAAAAAGCTT+GGG + Chr8:25362940-25362959 None:intergenic 25.0%
! CACAGTTAATAACATACATA+AGG + Chr8:25360100-25360119 None:intergenic 25.0%
! CAGATGAATAGATAAGAAAA+GGG - Chr8:25362101-25362120 MsG0880043477.01.T01:intron 25.0%
! GAAAAATTTAGGGAAAATAG+AGG - Chr8:25356917-25356936 MsG0880043477.01.T01:intron 25.0%
! GATGAAATAATTGCTCTATT+TGG - Chr8:25360261-25360280 MsG0880043477.01.T01:intron 25.0%
! GGCTTAAAGTAATTTATGTT+TGG - Chr8:25358772-25358791 MsG0880043477.01.T01:intron 25.0%
! GTTACACATAAAAAGTTACA+CGG - Chr8:25358352-25358371 MsG0880043477.01.T01:intron 25.0%
! TACAACAAAACAAATGTCTT+GGG + Chr8:25362297-25362316 None:intergenic 25.0%
! TACATTCATATAAATAGGGT+TGG - Chr8:25358796-25358815 MsG0880043477.01.T01:intron 25.0%
! TAGCGATCCAAAATTTATAA+AGG + Chr8:25360848-25360867 None:intergenic 25.0%
! TCAGATGAATAGATAAGAAA+AGG - Chr8:25362100-25362119 MsG0880043477.01.T01:intron 25.0%
! TGATTCTGTAAAATTGATTG+TGG - Chr8:25358881-25358900 MsG0880043477.01.T01:intron 25.0%
! TTCTTAAATAGAGAAGACTT+AGG - Chr8:25357697-25357716 MsG0880043477.01.T01:intron 25.0%
! TTGAAAAAATAAGTACGAGT+AGG + Chr8:25361688-25361707 None:intergenic 25.0%
! TTGTATTTAATCCTAAGTCA+GGG + Chr8:25357323-25357342 None:intergenic 25.0%
! TTTGACTAAAAAAGACTTGT+TGG + Chr8:25357232-25357251 None:intergenic 25.0%
! TTTGTATTTAATCCTAAGTC+AGG + Chr8:25357324-25357343 None:intergenic 25.0%
!! AACTAAAAGTGATTTGTGTT+TGG + Chr8:25359133-25359152 None:intergenic 25.0%
!! AATGTTTACTTTAGAGATGA+GGG - Chr8:25360632-25360651 MsG0880043477.01.T01:intron 25.0%
!! AATTCAAATTTTGCCAAGAA+TGG + Chr8:25362355-25362374 None:intergenic 25.0%
!! AATTTGTCACAAAGATGTTT+TGG - Chr8:25362044-25362063 MsG0880043477.01.T01:intron 25.0%
!! AATTTTCCTTCTTAAGAATC+TGG - Chr8:25362908-25362927 MsG0880043477.01.T01:CDS 25.0%
!! ACTAAAAGTGATTTGTGTTT+GGG + Chr8:25359132-25359151 None:intergenic 25.0%
!! ATGGTTCTTTCAATTTTCAA+TGG - Chr8:25360568-25360587 MsG0880043477.01.T01:CDS 25.0%
!! ATTCAAATTTTGCCAAGAAT+GGG + Chr8:25362354-25362373 None:intergenic 25.0%
!! CAAGTAAAATCAATTTTGGA+GGG + Chr8:25359025-25359044 None:intergenic 25.0%
!! GCTTCAAGTAAAATCAATTT+TGG + Chr8:25359029-25359048 None:intergenic 25.0%
!! GTAACTTTTTATGTGTAACA+CGG + Chr8:25358351-25358370 None:intergenic 25.0%
!! GTATTTTGTAGAATTGCTTT+TGG + Chr8:25359170-25359189 None:intergenic 25.0%
!! TAACTTTTTATGTGTAACAC+GGG + Chr8:25358350-25358369 None:intergenic 25.0%
!! TATGACATTTTGTCAGATTT+GGG - Chr8:25356741-25356760 MsG0880043477.01.T01:intron 25.0%
!! TATGTATTCATGATCCTTTT+GGG - Chr8:25358318-25358337 MsG0880043477.01.T01:intron 25.0%
!! TCAAGTAAAATCAATTTTGG+AGG + Chr8:25359026-25359045 None:intergenic 25.0%
!! TTAAGCCTATTTAGCTTAAA+AGG - Chr8:25357727-25357746 MsG0880043477.01.T01:intron 25.0%
!! TTATGACATTTTGTCAGATT+TGG - Chr8:25356740-25356759 MsG0880043477.01.T01:intron 25.0%
!! TTATGTATTCATGATCCTTT+TGG - Chr8:25358317-25358336 MsG0880043477.01.T01:intron 25.0%
!!! ATTTGTTTTGTTGTACAAGT+AGG - Chr8:25362302-25362321 MsG0880043477.01.T01:intron 25.0%
!!! GTGAGTTTTTCAAATTGTAA+GGG - Chr8:25360151-25360170 MsG0880043477.01.T01:intron 25.0%
!!! GTTTTTAAAAAAGAGAAGGT+GGG + Chr8:25361934-25361953 None:intergenic 25.0%
!!! TCTATTTTAAGAGTGAAACT+AGG - Chr8:25361653-25361672 MsG0880043477.01.T01:intron 25.0%
!!! TGATATTGATTTTCGGTTAA+GGG - Chr8:25357410-25357429 MsG0880043477.01.T01:intron 25.0%
!!! TGTTTTTAAAAAAGAGAAGG+TGG + Chr8:25361935-25361954 None:intergenic 25.0%
!!! TTGATATTGATTTTCGGTTA+AGG - Chr8:25357409-25357428 MsG0880043477.01.T01:intron 25.0%
!!! TTTCCTATTGAACCATTTTT+GGG - Chr8:25360180-25360199 MsG0880043477.01.T01:intron 25.0%
!!! TTTTAATTCATCACCCATTT+TGG + Chr8:25361279-25361298 None:intergenic 25.0%
AAAAGTCTCTTAAGCCTATT+AGG - Chr8:25357769-25357788 MsG0880043477.01.T01:intron 30.0%
AAGAATCTCTATGACAGATA+GGG - Chr8:25357601-25357620 MsG0880043477.01.T01:intron 30.0%
AAGGGAAAACACTTACTAAT+TGG - Chr8:25362119-25362138 MsG0880043477.01.T01:intron 30.0%
AATACTACTGTCTACTTACA+CGG + Chr8:25358379-25358398 None:intergenic 30.0%
ACAACCTTGTAAAATCATCT+CGG - Chr8:25361622-25361641 MsG0880043477.01.T01:intron 30.0%
ACACACAAAAAAAAGAAGGA+AGG + Chr8:25362887-25362906 None:intergenic 30.0%
AGTTAAAGCAGTATCAATGT+GGG + Chr8:25361338-25361357 None:intergenic 30.0%
ATAAAGGAAAGATGAAGTCA+TGG + Chr8:25360876-25360895 None:intergenic 30.0%
ATAACAGAATTGCACATTCA+GGG - Chr8:25357553-25357572 MsG0880043477.01.T01:intron 30.0%
ATGATCAGTACTAGGAAAAA+GGG - Chr8:25362242-25362261 MsG0880043477.01.T01:intron 30.0%
CAATGTGATCTACGTTAAAA+TGG + Chr8:25358032-25358051 None:intergenic 30.0%
CAGCACAAAAATAAAACACA+TGG + Chr8:25361835-25361854 None:intergenic 30.0%
CTACAATTTCTAACTGTGTT+TGG - Chr8:25358914-25358933 MsG0880043477.01.T01:intron 30.0%
CTCTATTTAAGAAAAAAGCC+TGG + Chr8:25357690-25357709 None:intergenic 30.0%
CTTAAACTCTTTAGTCTGTT+TGG + Chr8:25358297-25358316 None:intergenic 30.0%
GACTACTTTGTCTTTAATCT+TGG - Chr8:25357575-25357594 MsG0880043477.01.T01:intron 30.0%
GCAACATTATACAAAAAGCT+TGG + Chr8:25362941-25362960 None:intergenic 30.0%
GTACAACAAAACAAATGTCT+TGG + Chr8:25362298-25362317 None:intergenic 30.0%
GTTTGCTTGCAAATCTTTAT+TGG - Chr8:25362160-25362179 MsG0880043477.01.T01:intron 30.0%
TAAAAAAGAGAAAGGTGAGT+TGG + Chr8:25358712-25358731 None:intergenic 30.0%
TCCAAAATACTGAAAAAGAG+TGG + Chr8:25356604-25356623 None:intergenic 30.0%
TCTGTTTGGTAAAGAGTAAA+TGG + Chr8:25358283-25358302 None:intergenic 30.0%
TGAATGCTTGATTGAATGAA+TGG - Chr8:25356852-25356871 MsG0880043477.01.T01:intron 30.0%
TGCTTAACCAAAAGAGTAAA+TGG - Chr8:25357256-25357275 MsG0880043477.01.T01:intron 30.0%
TTATACACACATTTACACCT+AGG + Chr8:25362666-25362685 None:intergenic 30.0%
TTATAGGAAAGATGAAGTCA+TGG + Chr8:25360920-25360939 None:intergenic 30.0%
TTTGGGCATATTATTACTGT+TGG - Chr8:25362528-25362547 MsG0880043477.01.T01:intron 30.0%
! AAAGTGACCATTTACTCTTT+TGG + Chr8:25357266-25357285 None:intergenic 30.0%
! ACTATATAGTTACTTTGCAG+AGG + Chr8:25361738-25361757 None:intergenic 30.0%
! ATAAACGATCATTTTCTCGT+GGG + Chr8:25357209-25357228 None:intergenic 30.0%
! ATATTCTAAAAAGGTTGAGG+TGG - Chr8:25360394-25360413 MsG0880043477.01.T01:intron 30.0%
! ATGTTTACTTTAGAGATGAG+GGG - Chr8:25360633-25360652 MsG0880043477.01.T01:intron 30.0%
! ATTTGTTGAATTGTAGTGAC+AGG - Chr8:25360671-25360690 MsG0880043477.01.T01:intron 30.0%
! CAATGTTTACTTTAGAGATG+AGG - Chr8:25360631-25360650 MsG0880043477.01.T01:intron 30.0%
! CTAAAAGTGATTTGTGTTTG+GGG + Chr8:25359131-25359150 None:intergenic 30.0%
! CTATATAGTTACTTTGCAGA+GGG + Chr8:25361737-25361756 None:intergenic 30.0%
! CTTTCCTATTGAACCATTTT+TGG - Chr8:25360179-25360198 MsG0880043477.01.T01:intron 30.0%
! GAGATATTCTAAAAAGGTTG+AGG - Chr8:25360391-25360410 MsG0880043477.01.T01:intron 30.0%
! GATAATCAACACGAGTTTTA+GGG + Chr8:25357969-25357988 None:intergenic 30.0%
! TAAAAGTGATTTGTGTTTGG+GGG + Chr8:25359130-25359149 None:intergenic 30.0%
! TGATAATCAACACGAGTTTT+AGG + Chr8:25357970-25357989 None:intergenic 30.0%
! TTCAAATTTTGCCAAGAATG+GGG + Chr8:25362353-25362372 None:intergenic 30.0%
!! GGTGAGTTTTTCAAATTGTA+AGG - Chr8:25360150-25360169 MsG0880043477.01.T01:intron 30.0%
!! GTATTTTTGTCAGTTTGGTT+GGG - Chr8:25357110-25357129 MsG0880043477.01.T01:intron 30.0%
!! TTCCTATTGAACCATTTTTG+GGG - Chr8:25360181-25360200 MsG0880043477.01.T01:intron 30.0%
!! TTTTCAATGGATTCTTGTCT+TGG - Chr8:25360581-25360600 MsG0880043477.01.T01:CDS 30.0%
!!! AAGCTACAATTTGTTGCTTT+TGG + Chr8:25359380-25359399 None:intergenic 30.0%
!!! ACAGTAGTATTGCGTTTTTT+AGG - Chr8:25358388-25358407 MsG0880043477.01.T01:intron 30.0%
!!! ATTTTATTTTTCAGTCTGGG+AGG - Chr8:25358605-25358624 MsG0880043477.01.T01:intron 30.0%
!!! CTCTTTTTCAGTATTTTGGA+AGG - Chr8:25356604-25356623 MsG0880043477.01.T01:CDS 30.0%
!!! GCACTTATGTTGTCATTTTA+GGG - Chr8:25357359-25357378 MsG0880043477.01.T01:CDS 30.0%
!!! TAGGTCAATATGTCTTGTTT+TGG - Chr8:25359865-25359884 MsG0880043477.01.T01:intron 30.0%
!!! TCCACTCTTTTTCAGTATTT+TGG - Chr8:25356600-25356619 MsG0880043477.01.T01:CDS 30.0%
!!! TGCACTTATGTTGTCATTTT+AGG - Chr8:25357358-25357377 MsG0880043477.01.T01:CDS 30.0%
AAAAGTCCCTTTAAGTGCTT+AGG + Chr8:25361235-25361254 None:intergenic 35.0%
AACCATCATTGTGATCTACT+TGG - Chr8:25362730-25362749 MsG0880043477.01.T01:CDS 35.0%
AAGTAGATCACAATGATGGT+TGG + Chr8:25362731-25362750 None:intergenic 35.0%
AATTCTTGTAGAAGCTGAAC+TGG + Chr8:25359224-25359243 None:intergenic 35.0%
ACACATGCGTTAGTTAACTA+AGG - Chr8:25357082-25357101 MsG0880043477.01.T01:intron 35.0%
ACTTGTCCAGATTCTTAAGA+AGG + Chr8:25362917-25362936 None:intergenic 35.0%
AGAGTCAAAAGTGATTCTAG+AGG + Chr8:25359477-25359496 None:intergenic 35.0%
ATACCTTCTATGTTGCTAAC+CGG - Chr8:25362687-25362706 MsG0880043477.01.T01:CDS 35.0%
ATACTACTGTCTACTTACAC+GGG + Chr8:25358378-25358397 None:intergenic 35.0%
CAAGAATCTCTATGACAGAT+AGG - Chr8:25357600-25357619 MsG0880043477.01.T01:intron 35.0%
CACTTACTAATTGGAACTGA+TGG - Chr8:25362128-25362147 MsG0880043477.01.T01:intron 35.0%
CTCAATACACTTGACATGAA+AGG + Chr8:25361546-25361565 None:intergenic 35.0%
CTGTCATTAGGGATAGAAAT+AGG + Chr8:25358233-25358252 None:intergenic 35.0%
GAAAAATGATTCTGCACACA+AGG - Chr8:25361143-25361162 MsG0880043477.01.T01:intron 35.0%
GAAAGTTCAGTCATGCAATA+TGG - Chr8:25361432-25361451 MsG0880043477.01.T01:intron 35.0%
GACTTGCAAAACTTCAAACA+TGG - Chr8:25358470-25358489 MsG0880043477.01.T01:intron 35.0%
GAGTTAAAGCAGTATCAATG+TGG + Chr8:25361339-25361358 None:intergenic 35.0%
GATAACAGAATTGCACATTC+AGG - Chr8:25357552-25357571 MsG0880043477.01.T01:intron 35.0%
GATGATCAGTACTAGGAAAA+AGG - Chr8:25362241-25362260 MsG0880043477.01.T01:intron 35.0%
GCAATTGACTGAATGAATGA+AGG - Chr8:25356887-25356906 MsG0880043477.01.T01:intron 35.0%
GTGCTTAGGTAATATTGTGA+AGG + Chr8:25361221-25361240 None:intergenic 35.0%
TACAATTAAGCCAAGACTTC+TGG + Chr8:25361894-25361913 None:intergenic 35.0%
TACACCTCGAAAATCAATTC+TGG + Chr8:25358957-25358976 None:intergenic 35.0%
TACCAAGTAGATCACAATGA+TGG + Chr8:25362735-25362754 None:intergenic 35.0%
TACCCCAAAAATGGTTCAAT+AGG + Chr8:25360186-25360205 None:intergenic 35.0%
TAGACTTTCAAAGCCTAACT+CGG - Chr8:25358202-25358221 MsG0880043477.01.T01:intron 35.0%
TGACAACATAAGTGCACATT+CGG + Chr8:25357354-25357373 None:intergenic 35.0%
TTGACTGAATGAATGAAGGA+AGG - Chr8:25356891-25356910 MsG0880043477.01.T01:intron 35.0%
TTGGTCAAACACGGTATAAT+CGG + Chr8:25356638-25356657 None:intergenic 35.0%
TTTAAGAAAAAAGCCTGGTC+TGG + Chr8:25357685-25357704 None:intergenic 35.0%
! CGTGACCTTTTAAGCTAAAT+AGG + Chr8:25357735-25357754 None:intergenic 35.0%
! GATAAACGATCATTTTCTCG+TGG + Chr8:25357210-25357229 None:intergenic 35.0%
! TAGTGACAGGTACTCTAAAA+GGG - Chr8:25360684-25360703 MsG0880043477.01.T01:intron 35.0%
! TGCGAAAGGTGATGAAATTT+TGG + Chr8:25358508-25358527 None:intergenic 35.0%
! TGTAGTTTTCAGTGGATCAT+CGG + Chr8:25361864-25361883 None:intergenic 35.0%
! TTTGCCGAGATGATTTTACA+AGG + Chr8:25361629-25361648 None:intergenic 35.0%
!! AGAATCACTTTTGACTCTCT+AGG - Chr8:25359479-25359498 MsG0880043477.01.T01:intron 35.0%
!! GAAGCTGTTGAGTTTTTAAG+AGG - Chr8:25360737-25360756 MsG0880043477.01.T01:intron 35.0%
!! GGTATTTTTGTCAGTTTGGT+TGG - Chr8:25357109-25357128 MsG0880043477.01.T01:intron 35.0%
!! GTTTGAAGTTTTGCAAGTCT+CGG + Chr8:25358469-25358488 None:intergenic 35.0%
!!! AACCATTTTTGGGGTATTCT+TGG - Chr8:25360190-25360209 MsG0880043477.01.T01:intron 35.0%
AAAACTCAACAGCTTCATCC+AGG + Chr8:25360733-25360752 None:intergenic 40.0%
ACAACATAAGTGCACATTCG+GGG + Chr8:25357352-25357371 None:intergenic 40.0%
ACATGTGTCTTTGCAGTGTT+TGG - Chr8:25359587-25359606 MsG0880043477.01.T01:intron 40.0%
AGGTTATTGTTGAGCAGCAA+TGG - Chr8:25356488-25356507 MsG0880043477.01.T01:three_prime_UTR 40.0%
ATAATGCGAGTTCAGATGCT+GGG - Chr8:25362837-25362856 MsG0880043477.01.T01:CDS 40.0%
ATCAGCTGTGTAGTTAGGAA+CGG + Chr8:25356437-25356456 None:intergenic 40.0%
ATCTCTATGACAGATAGGGA+TGG - Chr8:25357605-25357624 MsG0880043477.01.T01:intron 40.0%
ATGAGCTGTCACAAAGACTA+AGG + Chr8:25357462-25357481 None:intergenic 40.0%
ATGCGTTAGTTAACTAAGGC+AGG - Chr8:25357086-25357105 MsG0880043477.01.T01:intron 40.0%
ATGTTGTCGATGATCTGGAA+TGG + Chr8:25356532-25356551 None:intergenic 40.0%
CACCAAGAATACCCCAAAAA+TGG + Chr8:25360195-25360214 None:intergenic 40.0%
CACGGTTCACTGTTTGAAAA+TGG + Chr8:25358445-25358464 None:intergenic 40.0%
CAGATCATCGACAACATAAG+AGG - Chr8:25356535-25356554 MsG0880043477.01.T01:three_prime_UTR 40.0%
CATTCAGGGCATATGATTGT+TGG - Chr8:25360998-25361017 MsG0880043477.01.T01:intron 40.0%
CTAAAAAGTAGGGCAATGAC+AGG - Chr8:25358134-25358153 MsG0880043477.01.T01:intron 40.0%
CTCTTATGTTGTCGATGATC+TGG + Chr8:25356537-25356556 None:intergenic 40.0%
GAAATAGGTTAGACCGAGTT+AGG + Chr8:25358218-25358237 None:intergenic 40.0%
GAACCATAGCATGAACACAA+AGG + Chr8:25360555-25360574 None:intergenic 40.0%
GACAACATAAGTGCACATTC+GGG + Chr8:25357353-25357372 None:intergenic 40.0%
GGTTATTGTTGAGCAGCAAT+GGG - Chr8:25356489-25356508 MsG0880043477.01.T01:three_prime_UTR 40.0%
GTAACTAAAATGACGAGACC+CGG + Chr8:25362709-25362728 None:intergenic 40.0%
GTAGTGACAGGTACTCTAAA+AGG - Chr8:25360683-25360702 MsG0880043477.01.T01:intron 40.0%
TAAAGTCTAAGTCTGGTCTG+CGG + Chr8:25358160-25358179 None:intergenic 40.0%
TACCTTCTATGTTGCTAACC+GGG - Chr8:25362688-25362707 MsG0880043477.01.T01:CDS 40.0%
TATAATGCGAGTTCAGATGC+TGG - Chr8:25362836-25362855 MsG0880043477.01.T01:CDS 40.0%
TATCCTTAAGCGTTTGTTCG+CGG - Chr8:25360349-25360368 MsG0880043477.01.T01:intron 40.0%
TCAACAATAACCTCCTCGTA+AGG + Chr8:25356481-25356500 None:intergenic 40.0%
TCTCCTTTGTGTTCATGCTA+TGG - Chr8:25360549-25360568 MsG0880043477.01.T01:CDS 40.0%
TCTCTATGACAGATAGGGAT+GGG - Chr8:25357606-25357625 MsG0880043477.01.T01:intron 40.0%
TGCGTTAGTTAACTAAGGCA+GGG - Chr8:25357087-25357106 MsG0880043477.01.T01:intron 40.0%
TGGCTTTCGCTATCACAATT+TGG + Chr8:25361259-25361278 None:intergenic 40.0%
TGTTTGGTATCTGTGTCTGT+CGG - Chr8:25359603-25359622 MsG0880043477.01.T01:intron 40.0%
TTCTATCCCTAATGACAGAG+AGG - Chr8:25358235-25358254 MsG0880043477.01.T01:intron 40.0%
! AGTGGATTTGAAACCACATC+AGG + Chr8:25356586-25356605 None:intergenic 40.0%
! CTCTATTTGGATTGGGTTCT+AGG - Chr8:25360274-25360293 MsG0880043477.01.T01:intron 40.0%
! GTAGTTTTCAGTGGATCATC+GGG + Chr8:25361863-25361882 None:intergenic 40.0%
! GTCTGATCTGTAGTTTTCAG+TGG + Chr8:25361872-25361891 None:intergenic 40.0%
! GTGATAGCGAAAGCCAAAAT+GGG - Chr8:25361263-25361282 MsG0880043477.01.T01:intron 40.0%
! TCAATGGATTCTTGTCTTGG+AGG - Chr8:25360584-25360603 MsG0880043477.01.T01:CDS 40.0%
! TGTGATAGCGAAAGCCAAAA+TGG - Chr8:25361262-25361281 MsG0880043477.01.T01:intron 40.0%
! TGTTTGGTTCCACTTCTAGA+GGG - Chr8:25358930-25358949 MsG0880043477.01.T01:intron 40.0%
! TTTTGTCAGTTTGGTTGGGT+GGG - Chr8:25357114-25357133 MsG0880043477.01.T01:intron 40.0%
! TTTTTGTCAGTTTGGTTGGG+TGG - Chr8:25357113-25357132 MsG0880043477.01.T01:intron 40.0%
!! AGGCTTTGAAAGTCTAAGTC+TGG + Chr8:25358198-25358217 None:intergenic 40.0%
!! ATGATCTGGAATGGATTGAG+AGG + Chr8:25356523-25356542 None:intergenic 40.0%
!! GAATGGATTGAGAGGATGTT+TGG + Chr8:25356515-25356534 None:intergenic 40.0%
!! GGCTTAAGAGACTTTTTGAG+AGG + Chr8:25357765-25357784 None:intergenic 40.0%
!! TCCTAGTACTGATCATCATG+TGG + Chr8:25362238-25362257 None:intergenic 40.0%
!!! CAGGGGTATTTTTGTCAGTT+TGG - Chr8:25357105-25357124 MsG0880043477.01.T01:intron 40.0%
!!! CTAGTTTTACTCCCCATTCT+TGG - Chr8:25362339-25362358 MsG0880043477.01.T01:intron 40.0%
!!! CTGTCATTGCCCTACTTTTT+AGG + Chr8:25358136-25358155 None:intergenic 40.0%
!!! TGGATTGGGTTCTAGGTTTT+GGG - Chr8:25360281-25360300 MsG0880043477.01.T01:intron 40.0%
!!! TTGGATTGGGTTCTAGGTTT+TGG - Chr8:25360280-25360299 MsG0880043477.01.T01:intron 40.0%
AAGCTGAACTGGTTGTGCAT+GGG + Chr8:25359213-25359232 None:intergenic 45.0%
AATGCATGTACCCCCTAGAA+TGG + Chr8:25356372-25356391 None:intergenic 45.0%
ACAATAACCTCCTCGTAAGG+AGG + Chr8:25356478-25356497 None:intergenic 45.0%
ACAGATCAGACCAGAAGTCT+TGG - Chr8:25361881-25361900 MsG0880043477.01.T01:intron 45.0%
ACTGCACCTCTCTGTCATTA+GGG + Chr8:25358244-25358263 None:intergenic 45.0%
AGTAGGAGTCCACATGAGTA+GGG - Chr8:25356679-25356698 MsG0880043477.01.T01:intron 45.0%
ATGCAGAGCAAACTCCATGA+AGG + Chr8:25356296-25356315 None:intergenic 45.0%
CAAACACGGTATAATCGGAC+AGG + Chr8:25356633-25356652 None:intergenic 45.0%
CAATAACCTCCTCGTAAGGA+GGG + Chr8:25356477-25356496 None:intergenic 45.0%
CAGTTCGGGCCTAAAAAGTA+GGG - Chr8:25358124-25358143 MsG0880043477.01.T01:intron 45.0%
CCAGGACAAGGTTAAGTAAC+TGG + Chr8:25360715-25360734 None:intergenic 45.0%
CCAGTTACTTAACCTTGTCC+TGG - Chr8:25360712-25360731 MsG0880043477.01.T01:intron 45.0%
CTTAAATAGGCCGGCCTAAT+AGG + Chr8:25357786-25357805 None:intergenic 45.0%
GCATGACTGAACTTTCAAGC+AGG + Chr8:25361428-25361447 None:intergenic 45.0%
GCCACATGATGATCAGTACT+AGG - Chr8:25362234-25362253 MsG0880043477.01.T01:intron 45.0%
GCGTTAGTTAACTAAGGCAG+GGG - Chr8:25357088-25357107 MsG0880043477.01.T01:intron 45.0%
GGTGTTCAAGTCAAGCTTAC+TGG - Chr8:25358667-25358686 MsG0880043477.01.T01:intron 45.0%
GTCACAAAAGTCCCTGACTT+AGG - Chr8:25357309-25357328 MsG0880043477.01.T01:intron 45.0%
GTCTCTTAAGCCTATTAGGC+CGG - Chr8:25357773-25357792 MsG0880043477.01.T01:intron 45.0%
GTTCAAGTCAAGCTTACTGG+TGG - Chr8:25358670-25358689 MsG0880043477.01.T01:intron 45.0%
TAACCGCGAACAAACGCTTA+AGG + Chr8:25360355-25360374 None:intergenic 45.0%
TAAGCGTTTGTTCGCGGTTA+TGG - Chr8:25360355-25360374 MsG0880043477.01.T01:intron 45.0%
TACCGTGTTTGACCAAGTGT+CGG - Chr8:25356642-25356661 MsG0880043477.01.T01:CDS 45.0%
TCAGTACTAGGAAAAAGGGC+AGG - Chr8:25362246-25362265 MsG0880043477.01.T01:intron 45.0%
TGACAGATAGGGATGGGAAT+AGG - Chr8:25357612-25357631 MsG0880043477.01.T01:intron 45.0%
TGCCAAAAACCCTACTCATG+TGG + Chr8:25356691-25356710 None:intergenic 45.0%
TGGAATGGAGATTCCTGATG+TGG - Chr8:25356570-25356589 MsG0880043477.01.T01:exon 45.0%
TGGGAGGAAAGAAACTGTTC+TGG - Chr8:25358621-25358640 MsG0880043477.01.T01:intron 45.0%
! AATTCTGGACCCTCTAGAAG+TGG + Chr8:25358942-25358961 None:intergenic 45.0%
! AGTTTTGCAAGTCTCGGTCA+CGG + Chr8:25358463-25358482 None:intergenic 45.0%
! ATTCTAGGGGGTACATGCAT+TGG - Chr8:25356371-25356390 MsG0880043477.01.T01:three_prime_UTR 45.0%
! GGGATGACAAAGCAGGTTTT+GGG - Chr8:25362511-25362530 MsG0880043477.01.T01:intron 45.0%
! GTCCACATGAGTAGGGTTTT+TGG - Chr8:25356686-25356705 MsG0880043477.01.T01:intron 45.0%
! GTGTTTGGTTCCACTTCTAG+AGG - Chr8:25358929-25358948 MsG0880043477.01.T01:intron 45.0%
! TGGGATGACAAAGCAGGTTT+TGG - Chr8:25362510-25362529 MsG0880043477.01.T01:intron 45.0%
! TTTTGCTGGGATGACAAAGC+AGG - Chr8:25362504-25362523 MsG0880043477.01.T01:intron 45.0%
!! AACTGCTTTTGTCGCAATGC+AGG - Chr8:25362556-25362575 MsG0880043477.01.T01:intron 45.0%
!! GGGTCCAGAATTGATTTTCG+AGG - Chr8:25358950-25358969 MsG0880043477.01.T01:intron 45.0%
!!! CTACTTTTTAGGCCCGAACT+GGG + Chr8:25358125-25358144 None:intergenic 45.0%
!!! GATTGGGTTCTAGGTTTTGG+GGG - Chr8:25360283-25360302 MsG0880043477.01.T01:intron 45.0%
!!! GGATTGGGTTCTAGGTTTTG+GGG - Chr8:25360282-25360301 MsG0880043477.01.T01:intron 45.0%
!! ATTATTTATATTACTTAAAT+AGG + Chr8:25357799-25357818 None:intergenic 5.0%
!!! AATTTTTTAAGAAAATTAAA+AGG + Chr8:25361050-25361069 None:intergenic 5.0%
!!! ATTTTGAAATTTATAAATTT+TGG - Chr8:25360838-25360857 MsG0880043477.01.T01:intron 5.0%
!!! TTTTTTAAAAACATAATTTA+TGG - Chr8:25361942-25361961 MsG0880043477.01.T01:intron 5.0%
AACCCCTTTCTTGAGGCAGA+TGG - Chr8:25362638-25362657 MsG0880043477.01.T01:CDS 50.0%
AAGCTTACTGGTGGCAGACA+AGG - Chr8:25358679-25358698 MsG0880043477.01.T01:intron 50.0%
ACACGGTATAATCGGACAGG+AGG + Chr8:25356630-25356649 None:intergenic 50.0%
ACATGTCGTGGAGCCATTCT+AGG - Chr8:25356356-25356375 MsG0880043477.01.T01:three_prime_UTR 50.0%
ACCCCTTTCTTGAGGCAGAT+GGG - Chr8:25362639-25362658 MsG0880043477.01.T01:CDS 50.0%
AGCCGACACTTGGTCAAACA+CGG + Chr8:25356647-25356666 None:intergenic 50.0%
AGCTGAACTGGTTGTGCATG+GGG + Chr8:25359212-25359231 None:intergenic 50.0%
AGCTTAAAAGGTCACGCCAC+AGG - Chr8:25357739-25357758 MsG0880043477.01.T01:intron 50.0%
ATAGAGGTCTCTGCCAGTTC+TGG - Chr8:25356933-25356952 MsG0880043477.01.T01:intron 50.0%
ATCTCGTCCGTACCATCAGT+TGG + Chr8:25362614-25362633 None:intergenic 50.0%
ATGCTTGTGTCGCCAACTGA+TGG - Chr8:25362599-25362618 MsG0880043477.01.T01:CDS 50.0%
ATGTCGTGGAGCCATTCTAG+GGG - Chr8:25356358-25356377 MsG0880043477.01.T01:three_prime_UTR 50.0%
CAACAGCTTCATCCAGGACA+AGG + Chr8:25360727-25360746 None:intergenic 50.0%
CACTGCACCTCTCTGTCATT+AGG + Chr8:25358245-25358264 None:intergenic 50.0%
CATGTCGTGGAGCCATTCTA+GGG - Chr8:25356357-25356376 MsG0880043477.01.T01:three_prime_UTR 50.0%
CCAGTTCGGGCCTAAAAAGT+AGG - Chr8:25358123-25358142 MsG0880043477.01.T01:intron 50.0%
GAAGCTGAACTGGTTGTGCA+TGG + Chr8:25359214-25359233 None:intergenic 50.0%
GACCCGGTTAGCAACATAGA+AGG + Chr8:25362693-25362712 None:intergenic 50.0%
GACCGTATCAGGCTTTCAGA+AGG - Chr8:25358099-25358118 MsG0880043477.01.T01:intron 50.0%
GAGTAGGAGTCCACATGAGT+AGG - Chr8:25356678-25356697 MsG0880043477.01.T01:intron 50.0%
GATTGCGAACCCCTTTCTTG+AGG - Chr8:25362631-25362650 MsG0880043477.01.T01:CDS 50.0%
TCTCCATTCCATGCTCCACT+CGG + Chr8:25356561-25356580 None:intergenic 50.0%
TCTGTGCAGCAAACCAGAAC+TGG + Chr8:25356949-25356968 None:intergenic 50.0%
TGGGCATCAGCTGTGTAGTT+AGG + Chr8:25356442-25356461 None:intergenic 50.0%
TGGGTGGGAGCAAAACTTGT+TGG - Chr8:25357129-25357148 MsG0880043477.01.T01:intron 50.0%
TGTCGCAATGCAGGTTTGCA+GGG - Chr8:25362565-25362584 MsG0880043477.01.T01:intron 50.0%
TGTGTCGCCAACTGATGGTA+CGG - Chr8:25362604-25362623 MsG0880043477.01.T01:CDS 50.0%
TTGTCGCAATGCAGGTTTGC+AGG - Chr8:25362564-25362583 MsG0880043477.01.T01:intron 50.0%
! GGCCTTCTGAAAGCCTGATA+CGG + Chr8:25358104-25358123 None:intergenic 50.0%
! GGGGTATTCTTGGTGAGCAT+TGG - Chr8:25360200-25360219 MsG0880043477.01.T01:intron 50.0%
! GGGTGGGAGCAAAACTTGTT+GGG - Chr8:25357130-25357149 MsG0880043477.01.T01:intron 50.0%
!! GAGACTTTTTGAGAGGCCTG+TGG + Chr8:25357758-25357777 None:intergenic 50.0%
!! TCTGGTTTGCTGCACAGACT+GGG - Chr8:25356951-25356970 MsG0880043477.01.T01:intron 50.0%
!! TTCTGGTTTGCTGCACAGAC+TGG - Chr8:25356950-25356969 MsG0880043477.01.T01:intron 50.0%
!!! CCTACTTTTTAGGCCCGAAC+TGG + Chr8:25358126-25358145 None:intergenic 50.0%
AACACGGGAGTCGACCCAAA+AGG + Chr8:25358335-25358354 None:intergenic 55.0%
ACAGGCTAGCAGACCGTATC+AGG - Chr8:25358088-25358107 MsG0880043477.01.T01:intron 55.0%
ATAAGAGGCCGAGTGGAGCA+TGG - Chr8:25356550-25356569 MsG0880043477.01.T01:three_prime_UTR 55.0%
ATGTCCTTAGCCAGCAGGAG+AGG - Chr8:25356314-25356333 MsG0880043477.01.T01:three_prime_UTR 55.0%
CATTGGGCCTCTTGCTCAAG+AGG - Chr8:25356258-25356277 MsG0880043477.01.T01:three_prime_UTR 55.0%
CCCCATCTGCCTCAAGAAAG+GGG + Chr8:25362643-25362662 None:intergenic 55.0%
CCCCTTTCTTGAGGCAGATG+GGG - Chr8:25362640-25362659 MsG0880043477.01.T01:CDS 55.0%
CCTACGACCTAGCCTACAAC+AGG - Chr8:25357654-25357673 MsG0880043477.01.T01:intron 55.0%
CCTGTTGTAGGCTAGGTCGT+AGG + Chr8:25357657-25357676 None:intergenic 55.0%
CGACAACATAAGAGGCCGAG+TGG - Chr8:25356543-25356562 MsG0880043477.01.T01:three_prime_UTR 55.0%
GAAAAAAGCCTGGTCTGGCC+TGG + Chr8:25357680-25357699 None:intergenic 55.0%
GATAGGGATGGGAATAGGCC+AGG - Chr8:25357617-25357636 MsG0880043477.01.T01:intron 55.0%
GCCCCATCTGCCTCAAGAAA+GGG + Chr8:25362644-25362663 None:intergenic 55.0%
GCTTTCAGAAGGCCCAGTTC+GGG - Chr8:25358110-25358129 MsG0880043477.01.T01:intron 55.0%
GGCTTTCAGAAGGCCCAGTT+CGG - Chr8:25358109-25358128 MsG0880043477.01.T01:intron 55.0%
GTCGCAATGCAGGTTTGCAG+GGG - Chr8:25362566-25362585 MsG0880043477.01.T01:intron 55.0%
GTGTAGTTAGGAACGGCCGA+GGG + Chr8:25356430-25356449 None:intergenic 55.0%
TCCTATTGTGAACCCCCCCT+CGG - Chr8:25356411-25356430 MsG0880043477.01.T01:three_prime_UTR 55.0%
TCTGCATGTCCTTAGCCAGC+AGG - Chr8:25356309-25356328 MsG0880043477.01.T01:three_prime_UTR 55.0%
TGGCTCCACGACATGTCATC+CGG + Chr8:25356352-25356371 None:intergenic 55.0%
TGGTTCCGGATGACATGTCG+TGG - Chr8:25356344-25356363 MsG0880043477.01.T01:three_prime_UTR 55.0%
TGTAGTTAGGAACGGCCGAG+GGG + Chr8:25356429-25356448 None:intergenic 55.0%
TGTCCTTAGCCAGCAGGAGA+GGG - Chr8:25356315-25356334 MsG0880043477.01.T01:three_prime_UTR 55.0%
TGTCGTGGAGCCATTCTAGG+GGG - Chr8:25356359-25356378 MsG0880043477.01.T01:three_prime_UTR 55.0%
TGTGTAGTTAGGAACGGCCG+AGG + Chr8:25356431-25356450 None:intergenic 55.0%
! TGACAGAGAGGTGCAGTGTC+AGG - Chr8:25358247-25358266 MsG0880043477.01.T01:intron 55.0%
!! AATAGGCCAGGCTGGCTTAC+AGG - Chr8:25357629-25357648 MsG0880043477.01.T01:intron 55.0%
!! ATAGGCCAGGCTGGCTTACA+GGG - Chr8:25357630-25357649 MsG0880043477.01.T01:intron 55.0%
AAGGAGGGACAGGACGAGGA+TGG + Chr8:25356462-25356481 None:intergenic 60.0%
ACCTCCTCGTAAGGAGGGAC+AGG + Chr8:25356472-25356491 None:intergenic 60.0%
AGAGGCCCAATGTCTGCAGG+AGG + Chr8:25356250-25356269 None:intergenic 60.0%
AGGAGGGACAGGACGAGGAT+GGG + Chr8:25356461-25356480 None:intergenic 60.0%
AGGCCGAGTGGAGCATGGAA+TGG - Chr8:25356555-25356574 MsG0880043477.01.T01:three_prime_UTR 60.0%
GACCTAGCCTACAACAGGCC+AGG - Chr8:25357659-25357678 MsG0880043477.01.T01:intron 60.0%
GCAAGAGGCCCAATGTCTGC+AGG + Chr8:25356253-25356272 None:intergenic 60.0%
GGACTCCTACTCCTTCTCCG+CGG + Chr8:25356670-25356689 None:intergenic 60.0%
GGCCCCATCTGCCTCAAGAA+AGG + Chr8:25362645-25362664 None:intergenic 60.0%
GGGCGTGAGTTAACTCACGC+AGG - Chr8:25356971-25356990 MsG0880043477.01.T01:intron 60.0%
GTAGTTAGGAACGGCCGAGG+GGG + Chr8:25356428-25356447 None:intergenic 60.0%
GTCCTTAGCCAGCAGGAGAG+GGG - Chr8:25356316-25356335 MsG0880043477.01.T01:three_prime_UTR 60.0%
TAGTTAGGAACGGCCGAGGG+GGG + Chr8:25356427-25356446 None:intergenic 60.0%
TCCTGTCCCTCCTTACGAGG+AGG - Chr8:25356468-25356487 MsG0880043477.01.T01:three_prime_UTR 60.0%
TCGTAAGGAGGGACAGGACG+AGG + Chr8:25356466-25356485 None:intergenic 60.0%
TCGTCCTGTCCCTCCTTACG+AGG - Chr8:25356465-25356484 MsG0880043477.01.T01:three_prime_UTR 60.0%
TCTTGAGGCAGATGGGGCCT+AGG - Chr8:25362646-25362665 MsG0880043477.01.T01:CDS 60.0%
TGCTCAAGAGGCGGTGGCTA+TGG - Chr8:25356270-25356289 MsG0880043477.01.T01:three_prime_UTR 60.0%
TGGGCCTCTTGCTCAAGAGG+CGG - Chr8:25356261-25356280 MsG0880043477.01.T01:three_prime_UTR 60.0%
! GGAGAGGGGTGATCTGGTTC+CGG - Chr8:25356330-25356349 MsG0880043477.01.T01:three_prime_UTR 60.0%
!! TAGGCCAGGCTGGCTTACAG+GGG - Chr8:25357631-25357650 MsG0880043477.01.T01:intron 60.0%
!! TTGACCAAGTGTCGGCTCCG+CGG - Chr8:25356650-25356669 MsG0880043477.01.T01:intron 60.0%
ACAACAGGCCAGGCCAGACC+AGG - Chr8:25357669-25357688 MsG0880043477.01.T01:intron 65.0%
AGTTAGGAACGGCCGAGGGG+GGG + Chr8:25356426-25356445 None:intergenic 65.0%
CCAGATCACCCCTCTCCTGC+TGG + Chr8:25356327-25356346 None:intergenic 65.0%
CCAGCAGGAGAGGGGTGATC+TGG - Chr8:25356324-25356343 MsG0880043477.01.T01:three_prime_UTR 65.0%
GCCACCGCCTCTTGAGCAAG+AGG + Chr8:25356268-25356287 None:intergenic 65.0%
GCCGAGGGGGGGTTCACAAT+AGG + Chr8:25356415-25356434 None:intergenic 65.0%
GCCTCTTGCTCAAGAGGCGG+TGG - Chr8:25356264-25356283 MsG0880043477.01.T01:three_prime_UTR 65.0%
GGCCTGGCCTGTTGTAGGCT+AGG + Chr8:25357664-25357683 None:intergenic 65.0%
GGCGGTGGCTATGGCCTTCA+TGG - Chr8:25356279-25356298 MsG0880043477.01.T01:three_prime_UTR 65.0%
GGGATGGGAATAGGCCAGGC+TGG - Chr8:25357621-25357640 MsG0880043477.01.T01:intron 65.0%
GGTCTGGCCTGGCCTGTTGT+AGG + Chr8:25357669-25357688 None:intergenic 65.0%
TAGGCCCCTGTAAGCCAGCC+TGG + Chr8:25357638-25357657 None:intergenic 65.0%
TTCTCCGCGGAGCCGACACT+TGG + Chr8:25356657-25356676 None:intergenic 65.0%
! CACCCCTCTCCTGCTGGCTA+AGG + Chr8:25356321-25356340 None:intergenic 65.0%
!! AAGTGTCGGCTCCGCGGAGA+AGG - Chr8:25356656-25356675 MsG0880043477.01.T01:intron 65.0%
CGGCTCCGCGGAGAAGGAGT+AGG - Chr8:25356662-25356681 MsG0880043477.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 25356244 25363000 25356244 ID=MsG0880043477.01;Name=MsG0880043477.01
Chr8 mRNA 25356244 25363000 25356244 ID=MsG0880043477.01.T01;Parent=MsG0880043477.01;Name=MsG0880043477.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.6|1|0.75|0.8|5|333|234
Chr8 exon 25356244 25356666 25356244 ID=MsG0880043477.01.T01:exon:14260;Parent=MsG0880043477.01.T01
Chr8 exon 25357334 25357386 25357334 ID=MsG0880043477.01.T01:exon:14259;Parent=MsG0880043477.01.T01
Chr8 exon 25358486 25358551 25358486 ID=MsG0880043477.01.T01:exon:14258;Parent=MsG0880043477.01.T01
Chr8 exon 25360544 25360625 25360544 ID=MsG0880043477.01.T01:exon:14257;Parent=MsG0880043477.01.T01
Chr8 exon 25362587 25363000 25362587 ID=MsG0880043477.01.T01:exon:14256;Parent=MsG0880043477.01.T01
Chr8 CDS 25362587 25363000 25362587 ID=MsG0880043477.01.T01:cds;Parent=MsG0880043477.01.T01
Chr8 CDS 25360544 25360625 25360544 ID=MsG0880043477.01.T01:cds;Parent=MsG0880043477.01.T01
Chr8 CDS 25358486 25358551 25358486 ID=MsG0880043477.01.T01:cds;Parent=MsG0880043477.01.T01
Chr8 CDS 25357334 25357386 25357334 ID=MsG0880043477.01.T01:cds;Parent=MsG0880043477.01.T01
Chr8 CDS 25356577 25356666 25356577 ID=MsG0880043477.01.T01:cds;Parent=MsG0880043477.01.T01
Chr8 three_prime_UTR 25356244 25356576 25356244 ID=MsG0880043477.01.T01:three_prime_utr;Parent=MsG0880043477.01.T01
Gene Sequence

>MsG0880043477.01.T01

ATGCCTCCTGCAGACATTGGGCCTCTTGCTCAAGAGGCGGTGGCTATGGCCTTCATGGAGTTTGCTCTGCATGTCCTTAGCCAGCAGGAGAGGGGTGATCTGGTTCCGGATGACATGTCGTGGAGCCATTCTAGGGGGTACATGCATTGGTTGTATATAGTATCACATCCTATTGTGAACCCCCCCTCGGCCGTTCCTAACTACACAGCTGATGCCCATCCTCGTCCTGTCCCTCCTTACGAGGAGGTTATTGTTGAGCAGCAATGGGCCAAACATCCTCTCAATCCATTCCAGATCATCGACAACATAAGAGGCCGAGTGGAGCATGGAATGGAGATTCCTGATGTGGTTTCAAATCCACTCTTTTTCAGTATTTTGGAAGGCCTCCTGTCCGATTATACCGTGTTTGACCAATCTGGGAGGAAAGAAACTGTTCTGGATTTAGCAAAATTTGTTGATAAAGGTGTTCAAGTCAAGCTTACTGGTGGCAGACAAGGTACTCTAAAAGGGTATGACCAGTTACTTAACCTTGTCCTGGATGAAGCTGTTGAGTTTTTAAGAGATCCCGATGATCCACTGAAAACTACAGATCAGACCAGAAGTCTTGGCTTAATTGTTTGCAGGGGAACTGCTGTCATGCTTGTGTCGCCAACTGATGGTACGGACGAGATTGCGAACCCCTTTCTTGAGGCAGATGGGGCCTAG

Protein sequence

>MsG0880043477.01.T01

MPPADIGPLAQEAVAMAFMEFALHVLSQQERGDLVPDDMSWSHSRGYMHWLYIVSHPIVNPPSAVPNYTADAHPRPVPPYEEVIVEQQWAKHPLNPFQIIDNIRGRVEHGMEIPDVVSNPLFFSILEGLLSDYTVFDQSGRKETVLDLAKFVDKGVQVKLTGGRQGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLEADGA*