AlfalfaGEDB | MsG0380017382.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017382.01

KEGG: K02924
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF00832

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017382.01.T01	PPS05776.1	98.039	51	1	0	1	51	26	76	8.86E-29	107

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017382.01.T01	Q5SMI4	98.039	51	1	0	1	51	1	51	2.90E-30	102

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017382.01.T01	A0A2P5XR45	98.039	51	1	0	1	51	26	76	4.23e-29	107

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048135.01	MsG0380017382.01	0.806416	8.312434e-50	4.509158e-47
MsG0080048197.01	MsG0380017382.01	0.820517	6.578925e-53	5.216647e-50
MsG0080048687.01	MsG0380017382.01	0.869267	3.518877e-66	1.312342e-62
MsG0080048971.01	MsG0380017382.01	0.903849	2.265668e-79	3.413100e-75
MsG0080049013.01	MsG0380017382.01	-0.826432	2.722137e-54	2.552487e-51
MsG0180000139.01	MsG0380017382.01	0.842200	2.989698e-58	4.498954e-55
MsG0180000339.01	MsG0380017382.01	0.884552	1.739778e-71	1.152878e-67
MsG0180000575.01	MsG0380017382.01	0.931028	6.906425e-94	4.257892e-89
MsG0180000580.01	MsG0380017382.01	0.812005	5.270825e-51	3.312226e-48
MsG0180000614.01	MsG0380017382.01	0.889588	2.116746e-73	1.718584e-69
MsG0180000615.01	MsG0380017382.01	0.860520	1.950483e-63	5.346613e-60
MsG0180000743.01	MsG0380017382.01	0.935123	1.390531e-96	1.099722e-91
MsG0180001599.01	MsG0380017382.01	0.800590	1.341874e-48	6.272286e-46
MsG0180001886.01	MsG0380017382.01	0.800275	1.555797e-48	7.214264e-46
MsG0180002489.01	MsG0380017382.01	0.834170	3.499407e-56	4.119005e-53
MsG0180002547.01	MsG0380017382.01	0.840098	1.066768e-57	1.503757e-54
MsG0180003302.01	MsG0380017382.01	0.814843	1.253069e-51	8.500330e-49
MsG0180003548.01	MsG0380017382.01	0.802139	6.464634e-49	3.142619e-46
MsG0180003651.01	MsG0380017382.01	0.808274	3.357508e-50	1.911582e-47
MsG0180003793.01	MsG0380017382.01	0.912133	2.761131e-83	6.115106e-79
MsG0180004009.01	MsG0380017382.01	0.850439	1.697299e-60	3.325017e-57
MsG0180004050.01	MsG0380017382.01	0.852563	4.252892e-61	8.921989e-58
MsG0180004129.01	MsG0380017382.01	0.851023	1.162687e-60	2.321685e-57
MsG0180004130.01	MsG0380017382.01	0.875250	3.574292e-68	1.657595e-64
MsG0180004152.01	MsG0380017382.01	0.805210	1.490030e-49	7.837048e-47
MsG0180004481.01	MsG0380017382.01	0.873378	1.540336e-67	6.670083e-64
MsG0180004482.01	MsG0380017382.01	0.847932	8.456324e-60	1.526901e-56
MsG0180004509.01	MsG0380017382.01	0.920831	7.774568e-88	2.689616e-83
MsG0180004767.01	MsG0380017382.01	0.808210	3.464073e-50	1.968919e-47
MsG0180004854.01	MsG0380017382.01	0.898056	7.709697e-77	8.963716e-73
MsG0180004861.01	MsG0380017382.01	0.885068	1.117673e-71	7.561426e-68
MsG0180005334.01	MsG0380017382.01	0.809799	1.582435e-50	9.380647e-48
MsG0180005366.01	MsG0380017382.01	0.809700	1.662340e-50	9.828387e-48
MsG0180005426.01	MsG0380017382.01	0.841616	4.266002e-58	6.303389e-55
MsG0180005851.01	MsG0380017382.01	0.813416	2.587586e-51	1.688833e-48
MsG0180006013.01	MsG0380017382.01	0.863822	1.891705e-64	5.812238e-61
MsG0280006422.01	MsG0380017382.01	0.860437	2.066876e-63	5.649742e-60
MsG0280006424.01	MsG0380017382.01	0.869329	3.360066e-66	1.256064e-62
MsG0280010776.01	MsG0380017382.01	0.860291	2.288188e-63	6.222716e-60
MsG0280010801.01	MsG0380017382.01	0.883844	3.180047e-71	2.049548e-67
MsG0280010980.01	MsG0380017382.01	0.803342	3.649176e-49	1.829206e-46
MsG0280011141.01	MsG0380017382.01	0.819973	8.764797e-53	6.846571e-50
MsG0280011234.01	MsG0380017382.01	0.848322	6.597629e-60	1.206205e-56
MsG0280011388.01	MsG0380017382.01	0.823759	1.164996e-53	1.012368e-50
MsG0380012073.01	MsG0380017382.01	0.923250	3.401339e-89	1.345470e-84
MsG0380014330.01	MsG0380017382.01	0.814032	1.893593e-51	1.256683e-48
MsG0380014539.01	MsG0380017382.01	0.819219	1.302939e-52	9.965259e-50
MsG0380014647.01	MsG0380017382.01	0.820060	8.371377e-53	6.555501e-50
MsG0380015027.01	MsG0380017382.01	0.876455	1.377767e-68	6.684774e-65
MsG0380015435.01	MsG0380017382.01	0.842065	3.245538e-58	4.863396e-55
MsG0380015818.01	MsG0380017382.01	0.821333	4.268243e-53	3.462398e-50
MsG0380016067.01	MsG0380017382.01	0.849843	2.493310e-60	4.789277e-57
MsG0380016133.01	MsG0380017382.01	0.813524	2.451088e-51	1.604430e-48
MsG0380016290.01	MsG0380017382.01	0.851447	8.822703e-61	1.786285e-57
MsG0380016389.01	MsG0380017382.01	0.872642	2.717629e-67	1.145812e-63
MsG0380016559.01	MsG0380017382.01	0.876166	1.732361e-68	8.314497e-65
MsG0380016560.01	MsG0380017382.01	0.861883	7.501277e-64	2.154392e-60
MsG0380016604.01	MsG0380017382.01	0.826976	2.018554e-54	1.922623e-51
MsG0380016775.01	MsG0380017382.01	0.913447	6.087568e-84	1.440328e-79
MsG0380016860.01	MsG0380017382.01	0.863904	1.783539e-64	5.495871e-61
MsG0380017369.01	MsG0380017382.01	0.805378	1.374347e-49	7.259759e-47
MsG0380017382.01	MsG0380017556.01	0.821997	2.997771e-53	2.477724e-50
MsG0380017382.01	MsG0380017979.01	0.800874	1.174106e-48	5.528028e-46
MsG0380017382.01	MsG0380018033.01	0.826892	2.113676e-54	2.008275e-51
MsG0380017382.01	MsG0480018084.01	0.858666	7.042471e-63	1.811211e-59
MsG0380017382.01	MsG0480018110.01	0.841151	5.654021e-58	8.233393e-55
MsG0380017382.01	MsG0480018477.01	0.908800	1.149794e-81	2.171765e-77
MsG0380017382.01	MsG0480018894.01	0.813249	2.816379e-51	1.829648e-48
MsG0380017382.01	MsG0480019486.01	0.823133	1.631807e-53	1.393075e-50
MsG0380017382.01	MsG0480020959.01	0.821450	4.011140e-53	3.264325e-50
MsG0380017382.01	MsG0480021006.01	0.846987	1.537366e-59	2.693183e-56
MsG0380017382.01	MsG0480021159.01	0.877211	7.534827e-69	3.758002e-65
MsG0380017382.01	MsG0480021448.01	0.868083	8.495562e-66	3.034236e-62
MsG0380017382.01	MsG0480021451.01	0.842870	1.985592e-58	3.051262e-55
MsG0380017382.01	MsG0480021453.01	0.888553	5.330433e-73	4.148949e-69
MsG0380017382.01	MsG0480021464.01	0.818896	1.542647e-52	1.169524e-49
MsG0380017382.01	MsG0480021750.01	0.837603	4.715195e-57	6.156350e-54
MsG0380017382.01	MsG0480021832.01	0.851262	9.952480e-61	2.003011e-57
MsG0380017382.01	MsG0480021842.01	0.826288	2.945138e-54	2.750221e-51
MsG0380017382.01	MsG0480021994.01	0.823454	1.372950e-53	1.182654e-50
MsG0380017382.01	MsG0480022164.01	0.803909	2.783643e-49	1.415955e-46
MsG0380017382.01	MsG0480022223.01	0.885211	9.889775e-72	6.728185e-68
MsG0380017382.01	MsG0480022481.01	0.836272	1.031390e-56	1.293473e-53
MsG0380017382.01	MsG0480022614.01	0.844627	6.724942e-59	1.092172e-55
MsG0380017382.01	MsG0480022696.01	0.866860	2.092810e-65	7.159894e-62
MsG0380017382.01	MsG0480022711.01	0.817545	3.119372e-52	2.278422e-49
MsG0380017382.01	MsG0480022790.01	0.840711	7.373971e-58	1.059286e-54
MsG0380017382.01	MsG0480022795.01	0.815064	1.119517e-51	7.639665e-49
MsG0380017382.01	MsG0480022836.01	0.817607	3.021214e-52	2.210358e-49
MsG0380017382.01	MsG0480022913.01	0.846846	1.680089e-59	2.930048e-56
MsG0380017382.01	MsG0480022960.01	0.893003	9.417008e-75	8.813609e-71
MsG0380017382.01	MsG0480023149.01	0.889179	3.053013e-73	2.437146e-69
MsG0380017382.01	MsG0480023221.01	0.851327	9.539607e-61	1.924149e-57
MsG0380017382.01	MsG0480023399.01	0.900106	1.020413e-77	1.299876e-73
MsG0380017382.01	MsG0480023467.01	0.866520	2.684802e-65	9.075595e-62
MsG0380017382.01	MsG0480023559.01	0.835077	2.070258e-56	2.504018e-53
MsG0380017382.01	MsG0480023596.01	0.814829	1.262125e-51	8.558468e-49
MsG0380017382.01	MsG0480023738.01	0.811296	7.517561e-51	4.635712e-48
MsG0380017382.01	MsG0480023771.01	0.923805	1.634394e-89	6.673712e-85
MsG0380017382.01	MsG0480023844.01	0.863568	2.268595e-64	6.908003e-61
MsG0380017382.01	MsG0580024036.01	0.830694	2.542591e-55	2.699126e-52
MsG0380017382.01	MsG0580024051.01	0.825728	4.001323e-54	3.677420e-51
MsG0380017382.01	MsG0580024084.01	0.806075	9.808940e-50	5.274921e-47
MsG0380017382.01	MsG0580024339.01	0.810619	1.053290e-50	6.379882e-48
MsG0380017382.01	MsG0580024369.01	0.868954	4.448005e-66	1.639410e-62
MsG0380017382.01	MsG0580024619.01	0.832158	1.108565e-55	1.228760e-52
MsG0380017382.01	MsG0580024754.01	0.855952	4.465279e-62	1.048751e-58
MsG0380017382.01	MsG0580025268.01	0.814044	1.882680e-51	1.249839e-48
MsG0380017382.01	MsG0580025408.01	0.802537	5.351834e-49	2.628215e-46
MsG0380017382.01	MsG0580025756.01	0.846955	1.569244e-59	2.746381e-56
MsG0380017382.01	MsG0580026157.01	0.843546	1.310745e-58	2.057761e-55
MsG0380017382.01	MsG0580026485.01	0.800090	1.696335e-48	7.829125e-46
MsG0380017382.01	MsG0580027043.01	0.870845	1.072264e-66	4.233110e-63
MsG0380017382.01	MsG0580027361.01	0.802363	5.811900e-49	2.841709e-46
MsG0380017382.01	MsG0580029132.01	0.890400	1.020055e-73	8.564530e-70
MsG0380017382.01	MsG0580029283.01	0.802506	5.432423e-49	2.665663e-46
MsG0380017382.01	MsG0580029300.01	0.837043	6.561175e-57	8.420393e-54
MsG0380017382.01	MsG0580029893.01	0.808012	3.817464e-50	2.158355e-47
MsG0380017382.01	MsG0680031507.01	0.819900	9.108548e-53	7.100348e-50
MsG0380017382.01	MsG0680031628.01	0.863223	2.902858e-64	8.735486e-61
MsG0380017382.01	MsG0680032770.01	0.890070	1.373751e-73	1.137546e-69
MsG0380017382.01	MsG0680034671.01	0.898246	6.402753e-77	7.506066e-73
MsG0380017382.01	MsG0680035848.01	0.907597	4.264993e-81	7.619931e-77
MsG0380017382.01	MsG0680035888.01	0.840665	7.584192e-58	1.087905e-54
MsG0380017382.01	MsG0780036078.01	0.801326	9.493632e-49	4.520957e-46
MsG0380017382.01	MsG0780036240.01	0.857714	1.352112e-62	3.368178e-59
MsG0380017382.01	MsG0780036546.01	0.841584	4.348324e-58	6.418554e-55
MsG0380017382.01	MsG0780036547.01	0.807310	5.380426e-50	2.986957e-47
MsG0380017382.01	MsG0780036822.01	0.837834	4.114681e-57	5.410754e-54
MsG0380017382.01	MsG0780037240.01	0.858654	7.102846e-63	1.825944e-59
MsG0380017382.01	MsG0780037590.01	-0.846705	1.836120e-59	3.188096e-56
MsG0380017382.01	MsG0780038400.01	0.912138	2.745303e-83	6.082230e-79
MsG0380017382.01	MsG0780038587.01	0.926593	3.790864e-91	1.804084e-86
MsG0380017382.01	MsG0780038645.01	0.803528	3.338612e-49	1.681717e-46
MsG0380017382.01	MsG0780038735.01	0.817758	2.793138e-52	2.052067e-49
MsG0380017382.01	MsG0780038909.01	0.858841	6.243289e-63	1.615440e-59
MsG0380017382.01	MsG0780039340.01	0.814666	1.371375e-51	9.258423e-49
MsG0380017382.01	MsG0780039643.01	0.828398	9.193506e-55	9.127643e-52
MsG0380017382.01	MsG0780039844.01	0.868490	6.281729e-66	2.276636e-62
MsG0380017382.01	MsG0780039848.01	0.844190	8.813296e-59	1.411949e-55
MsG0380017382.01	MsG0780040338.01	0.835812	1.349261e-56	1.668464e-53
MsG0380017382.01	MsG0780040511.01	0.883577	3.988421e-71	2.543133e-67
MsG0380017382.01	MsG0780040545.01	0.834506	2.881487e-56	3.426754e-53
MsG0380017382.01	MsG0780040718.01	0.808409	3.141676e-50	1.794977e-47
MsG0380017382.01	MsG0780040782.01	0.843063	1.764186e-58	2.727470e-55
MsG0380017382.01	MsG0780040841.01	0.830273	3.222184e-55	3.378695e-52
MsG0380017382.01	MsG0780040900.01	0.844360	7.933543e-59	1.277585e-55
MsG0380017382.01	MsG0780041147.01	0.861695	8.561463e-64	2.442915e-60
MsG0380017382.01	MsG0780041223.01	0.905393	4.499652e-80	7.262208e-76
MsG0380017382.01	MsG0780041224.01	0.886554	3.090509e-72	2.217869e-68
MsG0380017382.01	MsG0780041295.01	0.870333	1.580099e-66	6.123175e-63
MsG0380017382.01	MsG0780041392.01	0.865198	7.027618e-65	2.267001e-61
MsG0380017382.01	MsG0780041462.01	0.922811	6.043971e-89	2.335773e-84
MsG0380017382.01	MsG0780041490.01	0.826934	2.065271e-54	1.964755e-51
MsG0380017382.01	MsG0780041519.01	0.812438	4.239740e-51	2.695895e-48
MsG0380017382.01	MsG0780041796.01	0.813002	3.190432e-51	2.058976e-48
MsG0380017382.01	MsG0880041967.01	0.848649	5.359137e-60	9.901425e-57
MsG0380017382.01	MsG0880042125.01	0.843766	1.145273e-58	1.810312e-55
MsG0380017382.01	MsG0880042131.01	0.858671	7.018118e-63	1.805249e-59
MsG0380017382.01	MsG0880042519.01	0.828941	6.796100e-55	6.854099e-52
MsG0380017382.01	MsG0880042779.01	0.826117	3.234889e-54	3.006075e-51
MsG0380017382.01	MsG0880042991.01	0.839457	1.566363e-57	2.164440e-54
MsG0380017382.01	MsG0880043477.01	0.878621	2.421371e-69	1.273176e-65
MsG0380017382.01	MsG0880043592.01	0.816556	5.204637e-52	3.699726e-49
MsG0380017382.01	MsG0880043770.01	0.857107	2.044342e-62	4.989551e-59
MsG0380017382.01	MsG0880044975.01	0.817169	3.791540e-52	2.740902e-49
MsG0380017382.01	MsG0880044990.01	0.800508	1.394437e-48	6.504325e-46
MsG0380017382.01	MsG0880045072.01	0.810136	1.339450e-50	8.010118e-48
MsG0380017382.01	MsG0880045145.01	0.855480	6.131832e-62	1.417718e-58
MsG0380017382.01	MsG0880045656.01	0.839516	1.511878e-57	2.092857e-54
MsG0380017382.01	MsG0880045951.01	0.804091	2.550611e-49	1.303468e-46
MsG0380017382.01	MsG0880045965.01	0.820702	5.964037e-53	4.753622e-50
MsG0380017382.01	MsG0880046089.01	0.811498	6.792784e-51	4.211614e-48
MsG0380017382.01	MsG0880046177.01	0.879456	1.227793e-69	6.661457e-66
MsG0380017382.01	MsG0880046444.01	0.839568	1.466089e-57	2.032592e-54
MsG0380017382.01	MsG0880046575.01	0.807205	5.663730e-50	3.135580e-47
MsG0380017382.01	MsG0880046631.01	0.855999	4.325129e-62	1.017360e-58
MsG0380017382.01	MsG0880046879.01	0.853874	1.790456e-61	3.925543e-58
MsG0380017382.01	MsG0880046933.01	0.821798	3.333278e-53	2.739520e-50
MsG0380017382.01	MsG0880047212.01	0.811966	5.374405e-51	3.373683e-48
MsG0380017382.01	MsG0880047427.01	0.855717	5.231168e-62	1.219031e-58
MsG0380017382.01	MsG0880047607.01	0.815945	7.125337e-52	4.981161e-49
MsG0280006483.01	MsG0380017382.01	0.874617	5.870149e-68	2.660016e-64
MsG0280006593.01	MsG0380017382.01	0.812535	4.037794e-51	2.573949e-48
MsG0280006819.01	MsG0380017382.01	0.831294	1.810640e-55	1.956373e-52
MsG0280006836.01	MsG0380017382.01	0.853777	1.909327e-61	4.172039e-58
MsG0280006993.01	MsG0380017382.01	0.884213	2.324100e-71	1.520300e-67
MsG0280007024.01	MsG0380017382.01	0.816071	6.679422e-52	4.685854e-49
MsG0280007161.01	MsG0380017382.01	0.837686	4.488609e-57	5.876220e-54
MsG0280007634.01	MsG0380017382.01	0.830502	2.832298e-55	2.989454e-52
MsG0280007787.01	MsG0380017382.01	0.806540	7.828786e-50	4.260329e-47
MsG0280007847.01	MsG0380017382.01	0.855955	4.455555e-62	1.046608e-58
MsG0280008118.01	MsG0380017382.01	0.857559	1.503193e-62	3.725159e-59
MsG0280009141.01	MsG0380017382.01	0.800157	1.643843e-48	7.599551e-46
MsG0280009375.01	MsG0380017382.01	0.854438	1.230658e-61	2.748337e-58
MsG0280009575.01	MsG0380017382.01	0.835695	1.444661e-56	1.780381e-53
MsG0280009591.01	MsG0380017382.01	0.813393	2.619110e-51	1.708353e-48
MsG0280010258.01	MsG0380017382.01	0.832477	9.244273e-56	1.034449e-52
MsG0280010383.01	MsG0380017382.01	0.858044	1.079121e-62	2.717932e-59
MsG0280010495.01	MsG0380017382.01	0.826862	2.148493e-54	2.039452e-51
MsG0280010525.01	MsG0380017382.01	0.842815	2.053847e-58	3.150759e-55

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017382.01.T01	MTR_3g106310	100.000	51	0	0	1	51	1	51	3.50e-32	105
MsG0380017382.01.T01	MTR_1g013070	100.000	51	0	0	1	51	1	51	3.50e-32	105

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017382.01.T01	AT4G31985	90.196	51	5	1	51	1	51	1.88e-29	98.2
MsG0380017382.01.T01	AT3G02190	88.235	51	6	1	51	1	51	4.41e-28	94.7
MsG0380017382.01.T01	AT2G25210	90.909	44	4	8	51	1	44	6.59e-24	84.0

Find 32 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTTATTGTAGTTAATTAA+AGG	0.251556	3:+95618359	MsG0380017382.01.T01:three_prime_UTR
ATTTAAGACAATCGATGTTT+TGG	0.282559	3:+95618280	MsG0380017382.01.T01:three_prime_UTR
GTGCAGCCGTCGAGCATTTC+CGG	0.303652	3:+95617838	MsG0380017382.01.T01:five_prime_UTR
TTAGATTAGGGCTTCGTGTT+AGG	0.305458	3:+95617795	None:intergenic
AAGATTCTGAAATTAGATTA+GGG	0.315313	3:+95617783	None:intergenic
AAAGATTCTGAAATTAGATT+AGG	0.315654	3:+95617782	None:intergenic
ATTCGTAATCAAGAAGAAAT+TGG	0.321220	3:+95617980	MsG0380017382.01.T01:CDS
CCGGAGGCAAGGATCGAAAA+TGG	0.389081	3:+95617857	MsG0380017382.01.T01:exon
GGCATTGTAATGTTATACTT+TGG	0.392128	3:+95618301	MsG0380017382.01.T01:three_prime_UTR
AGAATAGACCCATCCCTTAC+TGG	0.418157	3:+95618018	MsG0380017382.01.T01:CDS
TAGATTAGGGCTTCGTGTTA+GGG	0.422723	3:+95617796	None:intergenic
GGGTTTACAAGAAGCATTCT+CGG	0.431321	3:+95617816	MsG0380017382.01.T01:five_prime_UTR
TCCCTTACTGGATCCGTATG+AGG	0.452674	3:+95618030	MsG0380017382.01.T01:CDS
CACTGGCGCCGTACCAAGCT+CGG	0.478359	3:+95618186	MsG0380017382.01.T01:CDS
AACCCTAATAGTTCAAGAAA+AGG	0.479806	3:-95618240	None:intergenic
ACAATGCTAAGCGCCGTCAC+TGG	0.497185	3:+95618169	MsG0380017382.01.T01:CDS
CTCAAAATCCGAGCTTGGTA+CGG	0.513650	3:-95618194	None:intergenic
GCTTGGTACGGCGCCAGTGA+CGG	0.518206	3:-95618182	None:intergenic
TGAGGACTGACAACACCATC+AGG	0.522876	3:+95618048	MsG0380017382.01.T01:CDS
GTCCTCATACGGATCCAGTA+AGG	0.528387	3:-95618032	None:intergenic
GGACAAAACGCGGCAAAGCA+AGG	0.533748	3:-95618219	None:intergenic
GTCGAGCATTTCCGGAGGCA+AGG	0.547294	3:+95617846	MsG0380017382.01.T01:five_prime_UTR
TGGTGTTGTCAGTCCTCATA+CGG	0.570137	3:-95618043	None:intergenic
AGGACCTCAAAATCCGAGCT+TGG	0.583429	3:-95618199	None:intergenic
ATACGGATCCAGTAAGGGAT+GGG	0.586639	3:-95618026	None:intergenic
CATACGGATCCAGTAAGGGA+TGG	0.594687	3:-95618027	None:intergenic
AGAAATTGGCGAAGAAGATG+AGG	0.597939	3:+95617994	MsG0380017382.01.T01:CDS
ATTACGAATGTCTTGTGTGA+CGG	0.598814	3:-95617966	None:intergenic
TCCTCATACGGATCCAGTAA+GGG	0.602358	3:-95618031	None:intergenic
TTGCCTCCGGAAATGCTCGA+CGG	0.662148	3:-95617844	None:intergenic
TTCAAGAAAAGGACAAAACG+CGG	0.690502	3:-95618229	None:intergenic
CAGCCGTCGAGCATTTCCGG+AGG	0.690561	3:+95617841	MsG0380017382.01.T01:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATCCGAATTAATTAAAAA+AGG	-	Chr3:95618391-95618410	None:intergenic	15.0%
!!	AACTTATTGTAGTTAATTAA+AGG	+	Chr3:95618359-95618378	MsG0380017382.01.T01:three_prime_UTR	15.0%
!!!	TTTTTATTTTTTCCTCTTTT+AGG	+	Chr3:95618145-95618164	MsG0380017382.01.T01:intron	15.0%
!!!	GACACCTTTTTTAATTAATT+CGG	+	Chr3:95618384-95618403	MsG0380017382.01.T01:three_prime_UTR	20.0%
!!!	TATACATATTTAGTTTTGCT+GGG	+	Chr3:95618438-95618457	MsG0380017382.01.T01:three_prime_UTR	20.0%
!!!	TATATAAGTAAGAACTTTTG+CGG	+	Chr3:95618327-95618346	MsG0380017382.01.T01:three_prime_UTR	20.0%
!!!	TTATACATATTTAGTTTTGC+TGG	+	Chr3:95618437-95618456	MsG0380017382.01.T01:three_prime_UTR	20.0%
!	ATTCGTAATCAAGAAGAAAT+TGG	+	Chr3:95617980-95617999	MsG0380017382.01.T01:CDS	25.0%
!!!	ATTTAAGACAATCGATGTTT+TGG	+	Chr3:95618280-95618299	MsG0380017382.01.T01:three_prime_UTR	25.0%
	AACCCTAATAGTTCAAGAAA+AGG	-	Chr3:95618243-95618262	None:intergenic	30.0%
	GGCATTGTAATGTTATACTT+TGG	+	Chr3:95618301-95618320	MsG0380017382.01.T01:three_prime_UTR	30.0%
!	GTCCTTTTCTTGAACTATTA+GGG	+	Chr3:95618238-95618257	MsG0380017382.01.T01:three_prime_UTR	30.0%
!	TGTCCTTTTCTTGAACTATT+AGG	+	Chr3:95618237-95618256	MsG0380017382.01.T01:three_prime_UTR	30.0%
	AAATGCGAAGAAAGAGTGAA+AGG	-	Chr3:95618083-95618102	None:intergenic	35.0%
	AATGCGAAGAAAGAGTGAAA+GGG	-	Chr3:95618082-95618101	None:intergenic	35.0%
	ATTACGAATGTCTTGTGTGA+CGG	-	Chr3:95617969-95617988	None:intergenic	35.0%
	CTTAGCATTGTACCTAAAAG+AGG	-	Chr3:95618160-95618179	None:intergenic	35.0%
	TTCAAGAAAAGGACAAAACG+CGG	-	Chr3:95618232-95618251	None:intergenic	35.0%
	AGAAATTGGCGAAGAAGATG+AGG	+	Chr3:95617994-95618013	MsG0380017382.01.T01:CDS	40.0%
	AGCGTCTCTTCAATCGTATT+AGG	+	Chr3:95617892-95617911	MsG0380017382.01.T01:intron	40.0%
	GAAAGGGAAAGAATACCTGA+TGG	-	Chr3:95618066-95618085	None:intergenic	40.0%
	GCGTCTCTTCAATCGTATTA+GGG	+	Chr3:95617893-95617912	MsG0380017382.01.T01:intron	40.0%
!	AAGAACTTTTGCGGTGTTTG+AGG	+	Chr3:95618336-95618355	MsG0380017382.01.T01:three_prime_UTR	40.0%
!!	GATTGAAGAGACGCTGATTT+GGG	-	Chr3:95617887-95617906	None:intergenic	40.0%
!!	GGGTTTACAAGAAGCATTCT+CGG	+	Chr3:95617816-95617835	MsG0380017382.01.T01:five_prime_UTR	40.0%
	AGAATAGACCCATCCCTTAC+TGG	+	Chr3:95618018-95618037	MsG0380017382.01.T01:CDS	45.0%
	ATACGGATCCAGTAAGGGAT+GGG	-	Chr3:95618029-95618048	None:intergenic	45.0%
	CTCAAAATCCGAGCTTGGTA+CGG	-	Chr3:95618197-95618216	None:intergenic	45.0%
	TCCTCATACGGATCCAGTAA+GGG	-	Chr3:95618034-95618053	None:intergenic	45.0%
!	CGATTGAAGAGACGCTGATT+TGG	-	Chr3:95617888-95617907	None:intergenic	45.0%
!!	TGGTGTTGTCAGTCCTCATA+CGG	-	Chr3:95618046-95618065	None:intergenic	45.0%
	AGGACCTCAAAATCCGAGCT+TGG	-	Chr3:95618202-95618221	None:intergenic	50.0%
	CATACGGATCCAGTAAGGGA+TGG	-	Chr3:95618030-95618049	None:intergenic	50.0%
	GTCCTCATACGGATCCAGTA+AGG	-	Chr3:95618035-95618054	None:intergenic	50.0%
	TCCCTTACTGGATCCGTATG+AGG	+	Chr3:95618030-95618049	MsG0380017382.01.T01:CDS	50.0%
	TGAGGACTGACAACACCATC+AGG	+	Chr3:95618048-95618067	MsG0380017382.01.T01:CDS	50.0%
!	CCATTTTCGATCCTTGCCTC+CGG	-	Chr3:95617860-95617879	None:intergenic	50.0%
!	CGTACCAAGCTCGGATTTTG+AGG	+	Chr3:95618195-95618214	MsG0380017382.01.T01:CDS	50.0%
	CCGGAGGCAAGGATCGAAAA+TGG	+	Chr3:95617857-95617876	MsG0380017382.01.T01:exon	55.0%
	GGACAAAACGCGGCAAAGCA+AGG	-	Chr3:95618222-95618241	None:intergenic	55.0%
	TTGCCTCCGGAAATGCTCGA+CGG	-	Chr3:95617847-95617866	None:intergenic	55.0%
!	ACAATGCTAAGCGCCGTCAC+TGG	+	Chr3:95618169-95618188	MsG0380017382.01.T01:CDS	55.0%
	GTCGAGCATTTCCGGAGGCA+AGG	+	Chr3:95617846-95617865	MsG0380017382.01.T01:five_prime_UTR	60.0%
	GTGCAGCCGTCGAGCATTTC+CGG	+	Chr3:95617838-95617857	MsG0380017382.01.T01:five_prime_UTR	60.0%
	CACTGGCGCCGTACCAAGCT+CGG	+	Chr3:95618186-95618205	MsG0380017382.01.T01:CDS	65.0%
	CAGCCGTCGAGCATTTCCGG+AGG	+	Chr3:95617841-95617860	MsG0380017382.01.T01:five_prime_UTR	65.0%
	GCTTGGTACGGCGCCAGTGA+CGG	-	Chr3:95618185-95618204	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	95617797	95618463	95617797	ID=MsG0380017382.01;Name=MsG0380017382.01
Chr3	mRNA	95617797	95618463	95617797	ID=MsG0380017382.01.T01;Parent=MsG0380017382.01;Name=MsG0380017382.01.T01;_AED=0.21;_eAED=0.21;_QI=79\|1\|1\|1\|0\|0\|3\|248\|51
Chr3	exon	95617797	95617878	95617797	ID=MsG0380017382.01.T01:exon:5870;Parent=MsG0380017382.01.T01
Chr3	exon	95617966	95618069	95617966	ID=MsG0380017382.01.T01:exon:5871;Parent=MsG0380017382.01.T01
Chr3	exon	95618167	95618463	95618167	ID=MsG0380017382.01.T01:exon:5872;Parent=MsG0380017382.01.T01
Chr3	five_prime_UTR	95617797	95617875	95617797	ID=MsG0380017382.01.T01:five_prime_utr;Parent=MsG0380017382.01.T01
Chr3	CDS	95617876	95617878	95617876	ID=MsG0380017382.01.T01:cds;Parent=MsG0380017382.01.T01
Chr3	CDS	95617966	95618069	95617966	ID=MsG0380017382.01.T01:cds;Parent=MsG0380017382.01.T01
Chr3	CDS	95618167	95618215	95618167	ID=MsG0380017382.01.T01:cds;Parent=MsG0380017382.01.T01
Chr3	three_prime_UTR	95618216	95618463	95618216	ID=MsG0380017382.01.T01:three_prime_utr;Parent=MsG0380017382.01.T01

Gene Sequence	>MsG0380017382.01.T01 ATGCCGTCACACAAGACATTCGTAATCAAGAAGAAATTGGCGAAGAAGATGAGGCAGAATAGACCCATCCCTTACTGGATCCGTATGAGGACTGACAACACCATCAGGTACAATGCTAAGCGCCGTCACTGGCGCCGTACCAAGCTCGGATTTTGA
Protein sequence	>MsG0380017382.01.T01 MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF*