Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022614.01.T01 | XP_003608377.2 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022614.01.T01 | O82225 | 50.607 | 247 | 120 | 1 | 4 | 248 | 1 | 247 | 3.05E-89 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022614.01.T01 | G7JV26 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0.0 | 535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047812.01 | MsG0480022614.01 | 0.812033 | 5.196351e-51 | 3.267739e-48 |
| MsG0080048687.01 | MsG0480022614.01 | 0.804666 | 1.936543e-49 | 1.004359e-46 |
| MsG0080049121.01 | MsG0480022614.01 | 0.808283 | 3.341791e-50 | 1.903064e-47 |
| MsG0180000575.01 | MsG0480022614.01 | 0.821608 | 3.688940e-53 | 3.015318e-50 |
| MsG0180000743.01 | MsG0480022614.01 | 0.817376 | 3.405322e-52 | 2.475806e-49 |
| MsG0180000806.01 | MsG0480022614.01 | 0.801681 | 8.029550e-49 | 3.858039e-46 |
| MsG0180001599.01 | MsG0480022614.01 | 0.830424 | 2.959984e-55 | 3.117226e-52 |
| MsG0180002489.01 | MsG0480022614.01 | 0.843842 | 1.092429e-58 | 1.731114e-55 |
| MsG0180002491.01 | MsG0480022614.01 | 0.832697 | 8.151936e-56 | 9.182417e-53 |
| MsG0180003793.01 | MsG0480022614.01 | 0.800574 | 1.352387e-48 | 6.318790e-46 |
| MsG0180003864.01 | MsG0480022614.01 | 0.824520 | 7.722244e-54 | 6.856273e-51 |
| MsG0180004050.01 | MsG0480022614.01 | 0.841924 | 3.536953e-58 | 5.276387e-55 |
| MsG0180004767.01 | MsG0480022614.01 | 0.809478 | 1.855190e-50 | 1.090372e-47 |
| MsG0180004854.01 | MsG0480022614.01 | 0.808402 | 3.151783e-50 | 1.800471e-47 |
| MsG0180004861.01 | MsG0480022614.01 | 0.804659 | 1.942413e-49 | 1.007244e-46 |
| MsG0180005765.01 | MsG0480022614.01 | 0.807093 | 5.982663e-50 | 3.302364e-47 |
| MsG0180006013.01 | MsG0480022614.01 | 0.858821 | 6.332849e-63 | 1.637523e-59 |
| MsG0280011141.01 | MsG0480022614.01 | 0.805001 | 1.648302e-49 | 8.622857e-47 |
| MsG0280011307.01 | MsG0480022614.01 | 0.802512 | 5.416850e-49 | 2.658378e-46 |
| MsG0380012073.01 | MsG0480022614.01 | 0.827919 | 1.199073e-54 | 1.173904e-51 |
| MsG0380013579.01 | MsG0480022614.01 | 0.806868 | 6.672591e-50 | 3.661994e-47 |
| MsG0380014259.01 | MsG0480022614.01 | 0.803383 | 3.577968e-49 | 1.795432e-46 |
| MsG0380014539.01 | MsG0480022614.01 | 0.814717 | 1.336239e-51 | 9.033956e-49 |
| MsG0380014541.01 | MsG0480022614.01 | 0.816245 | 6.108018e-52 | 4.305400e-49 |
| MsG0480018477.01 | MsG0480022614.01 | 0.830992 | 2.148537e-55 | 2.300947e-52 |
| MsG0480021448.01 | MsG0480022614.01 | 0.820532 | 6.525967e-53 | 5.177088e-50 |
| MsG0480021453.01 | MsG0480022614.01 | 0.815794 | 7.701415e-52 | 5.362154e-49 |
| MsG0480021464.01 | MsG0480022614.01 | 0.854088 | 1.553498e-61 | 3.430278e-58 |
| MsG0480021832.01 | MsG0480022614.01 | 0.814771 | 1.299828e-51 | 8.800015e-49 |
| MsG0480021842.01 | MsG0480022614.01 | 0.855992 | 4.346217e-62 | 1.022069e-58 |
| MsG0480022183.01 | MsG0480022614.01 | 0.818753 | 1.663150e-52 | 1.255781e-49 |
| MsG0480022223.01 | MsG0480022614.01 | 0.812219 | 4.734137e-51 | 2.992435e-48 |
| MsG0480022481.01 | MsG0480022614.01 | 0.811274 | 7.599316e-51 | 4.683521e-48 |
| MsG0480022614.01 | MsG0480022678.01 | 0.804929 | 1.706264e-49 | 8.910306e-47 |
| MsG0480022614.01 | MsG0480022696.01 | 0.837457 | 5.140516e-57 | 6.681473e-54 |
| MsG0480022614.01 | MsG0480022790.01 | 0.837723 | 4.393902e-57 | 5.758401e-54 |
| MsG0480022614.01 | MsG0480022960.01 | 0.837438 | 5.198132e-57 | 6.752257e-54 |
| MsG0480022614.01 | MsG0480023399.01 | 0.800436 | 1.442372e-48 | 6.715826e-46 |
| MsG0480022614.01 | MsG0480023596.01 | 0.801463 | 8.899165e-49 | 4.252525e-46 |
| MsG0480022614.01 | MsG0480023771.01 | 0.839031 | 2.020376e-57 | 2.755402e-54 |
| MsG0480022614.01 | MsG0580024339.01 | 0.816628 | 5.014150e-52 | 3.571403e-49 |
| MsG0480022614.01 | MsG0580024409.01 | 0.814919 | 1.205486e-51 | 8.194007e-49 |
| MsG0480022614.01 | MsG0580024727.01 | 0.808860 | 2.517096e-50 | 1.455149e-47 |
| MsG0480022614.01 | MsG0580025134.01 | 0.801443 | 8.984500e-49 | 4.291161e-46 |
| MsG0480022614.01 | MsG0580026157.01 | 0.863029 | 3.331975e-64 | 9.958665e-61 |
| MsG0480022614.01 | MsG0680030408.01 | 0.817200 | 3.731065e-52 | 2.699477e-49 |
| MsG0480022614.01 | MsG0680034671.01 | 0.818676 | 1.731293e-52 | 1.304447e-49 |
| MsG0480022614.01 | MsG0680035476.01 | 0.804834 | 1.785930e-49 | 9.303414e-47 |
| MsG0480022614.01 | MsG0780036078.01 | 0.803030 | 4.235285e-49 | 2.106079e-46 |
| MsG0480022614.01 | MsG0780038735.01 | 0.807671 | 4.511435e-50 | 2.527971e-47 |
| MsG0480022614.01 | MsG0780038909.01 | 0.804769 | 1.842747e-49 | 9.583072e-47 |
| MsG0480022614.01 | MsG0780040411.01 | 0.828752 | 7.550399e-55 | 7.572861e-52 |
| MsG0480022614.01 | MsG0780040511.01 | 0.815351 | 9.666840e-52 | 6.648915e-49 |
| MsG0480022614.01 | MsG0780040545.01 | 0.810016 | 1.421526e-50 | 8.475013e-48 |
| MsG0480022614.01 | MsG0780040845.01 | 0.824676 | 7.095187e-54 | 6.328686e-51 |
| MsG0480022614.01 | MsG0780041223.01 | 0.803193 | 3.917554e-49 | 1.956360e-46 |
| MsG0480022614.01 | MsG0780041295.01 | 0.823311 | 1.483410e-53 | 1.272631e-50 |
| MsG0480022614.01 | MsG0780041392.01 | 0.838144 | 3.422842e-57 | 4.543167e-54 |
| MsG0480022614.01 | MsG0780041490.01 | 0.827682 | 1.366983e-54 | 1.329036e-51 |
| MsG0480022614.01 | MsG0780041796.01 | 0.846257 | 2.433828e-59 | 4.164380e-56 |
| MsG0480022614.01 | MsG0880045145.01 | 0.813909 | 2.016390e-51 | 1.333658e-48 |
| MsG0480022614.01 | MsG0880045619.01 | 0.820418 | 6.933394e-53 | 5.483238e-50 |
| MsG0480022614.01 | MsG0880045951.01 | 0.819244 | 1.285997e-52 | 9.842856e-50 |
| MsG0480022614.01 | MsG0880045965.01 | 0.818250 | 2.161974e-52 | 1.609854e-49 |
| MsG0480022614.01 | MsG0880046177.01 | 0.801314 | 9.545625e-49 | 4.544462e-46 |
| MsG0380015922.01 | MsG0480022614.01 | 0.814989 | 1.162984e-51 | 7.920516e-49 |
| MsG0380016133.01 | MsG0480022614.01 | 0.811076 | 8.387897e-51 | 5.142862e-48 |
| MsG0380016389.01 | MsG0480022614.01 | 0.804887 | 1.740736e-49 | 9.080922e-47 |
| MsG0380016604.01 | MsG0480022614.01 | 0.860999 | 1.396199e-63 | 3.890729e-60 |
| MsG0380016775.01 | MsG0480022614.01 | 0.817541 | 3.125628e-52 | 2.282744e-49 |
| MsG0380016860.01 | MsG0480022614.01 | 0.801541 | 8.577509e-49 | 4.106911e-46 |
| MsG0380017039.01 | MsG0480022614.01 | 0.814774 | 1.298158e-51 | 8.789509e-49 |
| MsG0380017382.01 | MsG0480022614.01 | 0.844627 | 6.724942e-59 | 1.092172e-55 |
| MsG0380017811.01 | MsG0480022614.01 | 0.814355 | 1.607474e-51 | 1.076162e-48 |
| MsG0280006483.01 | MsG0480022614.01 | 0.818134 | 2.296506e-52 | 1.704662e-49 |
| MsG0280006595.01 | MsG0480022614.01 | 0.808087 | 3.678409e-50 | 2.083912e-47 |
| MsG0280007024.01 | MsG0480022614.01 | 0.813090 | 3.052247e-51 | 1.974315e-48 |
| MsG0280007101.01 | MsG0480022614.01 | 0.804734 | 1.874259e-49 | 9.738523e-47 |
| MsG0280007161.01 | MsG0480022614.01 | 0.818301 | 2.105814e-52 | 1.570284e-49 |
| MsG0280007321.01 | MsG0480022614.01 | 0.821707 | 3.498644e-53 | 2.868019e-50 |
| MsG0280008286.01 | MsG0480022614.01 | 0.816332 | 5.840709e-52 | 4.126851e-49 |
| MsG0280008417.01 | MsG0480022614.01 | 0.801051 | 1.080574e-48 | 5.110589e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580029238.01 | MsG0480022614.01 | PPI |
| MsG0480022614.01 | MsG0280006644.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022614.01.T01 | MTR_4g093250 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0.0 | 535 |
| MsG0480022614.01.T01 | MTR_5g083210 | 72.691 | 249 | 64 | 2 | 1 | 249 | 1 | 245 | 2.86e-134 | 379 |
| MsG0480022614.01.T01 | MTR_2g009720 | 58.750 | 240 | 96 | 1 | 9 | 248 | 8 | 244 | 3.05e-102 | 298 |
| MsG0480022614.01.T01 | MTR_2g009720 | 59.903 | 207 | 80 | 1 | 9 | 215 | 8 | 211 | 4.21e-88 | 262 |
| MsG0480022614.01.T01 | MTR_5g078650 | 58.000 | 50 | 18 | 1 | 42 | 91 | 54 | 100 | 7.74e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022614.01.T01 | AT2G23970 | 50.607 | 247 | 120 | 1 | 4 | 248 | 1 | 247 | 3.11e-90 | 268 |
| MsG0480022614.01.T01 | AT4G30550 | 46.154 | 247 | 130 | 1 | 4 | 247 | 3 | 249 | 5.61e-82 | 246 |
| MsG0480022614.01.T01 | AT4G30540 | 48.571 | 245 | 126 | 0 | 4 | 248 | 1 | 245 | 3.89e-80 | 242 |
| MsG0480022614.01.T01 | AT2G23960 | 44.672 | 244 | 133 | 1 | 5 | 246 | 1 | 244 | 3.48e-75 | 229 |
| MsG0480022614.01.T01 | AT4G30530 | 44.628 | 242 | 132 | 1 | 9 | 248 | 5 | 246 | 6.43e-74 | 226 |
| MsG0480022614.01.T01 | AT2G23960 | 46.635 | 208 | 109 | 1 | 5 | 210 | 1 | 208 | 4.11e-67 | 207 |
Find 99 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGCTAAAGTACAAATTTA+TGG | 0.123040 | 4:+74720289 | MsG0480022614.01.T01:three_prime_UTR |
| AAAATGTACGGAGGGTATTT+TGG | 0.159436 | 4:+74718215 | MsG0480022614.01.T01:CDS |
| TAGGGAGTGGGAAGAGATTT+GGG | 0.235069 | 4:+74718156 | MsG0480022614.01.T01:CDS |
| CTCTTCCATGCCTCCTTATC+TGG | 0.241065 | 4:-74719927 | None:intergenic |
| TGAGAGAAAGGGAATTGTTT+TGG | 0.270804 | 4:-74718010 | None:intergenic |
| AAAGTACAAATTTATGGTTT+TGG | 0.292524 | 4:+74720295 | MsG0480022614.01.T01:three_prime_UTR |
| TAGATATGGAGATCACATTA+TGG | 0.306527 | 4:+74719649 | MsG0480022614.01.T01:CDS |
| GTAGGGAGTGGGAAGAGATT+TGG | 0.311768 | 4:+74718155 | MsG0480022614.01.T01:CDS |
| TGGCATTTGCTTTGGTCATC+AGG | 0.316497 | 4:+74718445 | MsG0480022614.01.T01:CDS |
| GGAATAGAAAATATAAATAT+TGG | 0.322855 | 4:+74719993 | MsG0480022614.01.T01:CDS |
| TGTTAATTTGATTAGATACT+TGG | 0.341295 | 4:+74719270 | MsG0480022614.01.T01:intron |
| ATCCCTGTGGCATTGAATAA+TGG | 0.342555 | 4:-74719415 | None:intergenic |
| TAGATACTTGGCCGTGCAAT+TGG | 0.364461 | 4:+74719282 | MsG0480022614.01.T01:intron |
| GGAATTGAGATGTTTAGATA+TGG | 0.367188 | 4:+74719635 | MsG0480022614.01.T01:CDS |
| AGATTGAGAGATTGAGAGAA+AGG | 0.371243 | 4:-74718022 | None:intergenic |
| AAAATCCTTGGCATTTGCTT+TGG | 0.382494 | 4:+74718437 | MsG0480022614.01.T01:CDS |
| AGATTCAATTCATCATCCTT+TGG | 0.389173 | 4:-74718308 | None:intergenic |
| TGAAAGCTGGGATGTGTATA+AGG | 0.394224 | 4:+74718268 | MsG0480022614.01.T01:CDS |
| TCGTGGGCAAACCATGATTT+AGG | 0.400789 | 4:+74720337 | MsG0480022614.01.T01:three_prime_UTR |
| TCTCCAACTGGCTGGGACAT+TGG | 0.414581 | 4:+74719321 | MsG0480022614.01.T01:CDS |
| AGATATGGAGATCACATTAT+GGG | 0.414653 | 4:+74719650 | MsG0480022614.01.T01:CDS |
| GGTCGTTATTGTGAAAGAAA+TGG | 0.428460 | 4:+74719972 | MsG0480022614.01.T01:CDS |
| AATATTTACAATTTCACATC+AGG | 0.432082 | 4:-74720160 | None:intergenic |
| TGGAGGAAGAAGGTGAAAGC+TGG | 0.433224 | 4:+74718255 | MsG0480022614.01.T01:CDS |
| CGTTTGAAATGCCTAAATCA+TGG | 0.443050 | 4:-74720348 | None:intergenic |
| TTTAGCAATCACTTCAGCTT+TGG | 0.448055 | 4:-74719600 | None:intergenic |
| TGAATAATGGAAAGCTTCGT+TGG | 0.450003 | 4:-74719402 | None:intergenic |
| AAACTTTGCTATGAGATTGA+AGG | 0.451687 | 4:+74719884 | MsG0480022614.01.T01:CDS |
| GATTGAGAGATTGAGAGAAA+GGG | 0.452627 | 4:-74718021 | None:intergenic |
| TGGAGAAAATGGTAGGGAGT+GGG | 0.479980 | 4:+74718144 | MsG0480022614.01.T01:CDS |
| GACATGAACAAGAAAATCCT+TGG | 0.480295 | 4:+74718425 | MsG0480022614.01.T01:CDS |
| TTAATTAAGAAAATGTAGAA+AGG | 0.481066 | 4:+74720238 | MsG0480022614.01.T01:three_prime_UTR |
| TTTCCATTATTCAATGCCAC+AGG | 0.486719 | 4:+74719412 | MsG0480022614.01.T01:CDS |
| TGAAGGAGAAGGCTGGTATG+TGG | 0.491137 | 4:+74719901 | MsG0480022614.01.T01:CDS |
| AAAGAAATCCCAAATTCAAA+AGG | 0.492126 | 4:-74720217 | None:intergenic |
| TGGGGTATTTGTGAGAATGT+TGG | 0.492454 | 4:+74718235 | MsG0480022614.01.T01:CDS |
| AAGGTGACTCGATCTCCAAC+TGG | 0.496252 | 4:+74719309 | MsG0480022614.01.T01:CDS |
| TGACTCGATCTCCAACTGGC+TGG | 0.497560 | 4:+74719313 | MsG0480022614.01.T01:CDS |
| GACTCGATCTCCAACTGGCT+GGG | 0.497877 | 4:+74719314 | MsG0480022614.01.T01:CDS |
| GTGAGAATGTTGGAGGAAGA+AGG | 0.500993 | 4:+74718245 | MsG0480022614.01.T01:CDS |
| TTGGTGGTATATTCTAAAGT+AGG | 0.501303 | 4:+74720012 | MsG0480022614.01.T01:exon |
| GACAAAGGAGATGGCAAAGA+GGG | 0.513633 | 4:-74719366 | None:intergenic |
| TTAAGGATGGAGAAAATGGT+AGG | 0.514388 | 4:+74718137 | MsG0480022614.01.T01:exon |
| AGGGTGATAATGTTATGTTT+CGG | 0.519404 | 4:-74719347 | None:intergenic |
| ATACTTGGCCGTGCAATTGG+AGG | 0.519944 | 4:+74719285 | MsG0480022614.01.T01:CDS |
| GCAATCACTTCAGCTTTGGC+AGG | 0.525095 | 4:-74719596 | None:intergenic |
| ATGTGCCACACCTTAATTAG+TGG | 0.525601 | 4:-74720074 | None:intergenic |
| TGGTATGTGGGAGCCAGATA+AGG | 0.526816 | 4:+74719914 | MsG0480022614.01.T01:CDS |
| ATTGCTAAATCAGATAAGAC+TGG | 0.527568 | 4:+74719614 | MsG0480022614.01.T01:CDS |
| ATTCTAAAGTAGGAATCGTA+TGG | 0.528680 | 4:+74720022 | MsG0480022614.01.T01:exon |
| TAGAGTACTCAGGATGACCT+TGG | 0.533908 | 4:-74719676 | None:intergenic |
| ATGGAGAAAATGGTAGGGAG+TGG | 0.538240 | 4:+74718143 | MsG0480022614.01.T01:CDS |
| TATTCAATGCCACAGGGATG+AGG | 0.540762 | 4:+74719419 | MsG0480022614.01.T01:CDS |
| AACACATGCATCTAGCTAGC+TGG | 0.545938 | 4:-74720100 | None:intergenic |
| TGCTATGAGATTGAAGGAGA+AGG | 0.548803 | 4:+74719890 | MsG0480022614.01.T01:CDS |
| GATGAATTGAATCTGTATGA+TGG | 0.549776 | 4:+74718317 | MsG0480022614.01.T01:CDS |
| TTAGCTAGAAATTGACTCGT+GGG | 0.553625 | 4:+74720321 | MsG0480022614.01.T01:three_prime_UTR |
| TGAAATTTCGCTGAATAAGA+CGG | 0.555005 | 4:-74719724 | None:intergenic |
| ATAGAAAATATAAATATTGG+TGG | 0.558147 | 4:+74719996 | MsG0480022614.01.T01:CDS |
| TTAGAGGGAGAAAGCATCAC+CGG | 0.558875 | 4:+74718086 | MsG0480022614.01.T01:five_prime_UTR |
| TGTGCCACACCTTAATTAGT+GGG | 0.563093 | 4:-74720073 | None:intergenic |
| TCAAGAGAAGACAAAGGAGA+TGG | 0.563452 | 4:-74719375 | None:intergenic |
| GGAGGAAGAAGGTGAAAGCT+GGG | 0.565836 | 4:+74718256 | MsG0480022614.01.T01:CDS |
| ACTATGCATCAGCTTCCTCA+AGG | 0.566000 | 4:+74719950 | MsG0480022614.01.T01:CDS |
| ACACCAATGTCCCAGCCAGT+TGG | 0.568855 | 4:-74719324 | None:intergenic |
| GAAGGAGAAGGCTGGTATGT+GGG | 0.577034 | 4:+74719902 | MsG0480022614.01.T01:CDS |
| TAAGGATGGAGAAAATGGTA+GGG | 0.582135 | 4:+74718138 | MsG0480022614.01.T01:exon |
| GAATATGTGAAGAAAATGTA+CGG | 0.585607 | 4:+74718203 | MsG0480022614.01.T01:CDS |
| TGGCCGTGCAATTGGAGGGA+AGG | 0.591128 | 4:+74719290 | MsG0480022614.01.T01:CDS |
| TACTTGGCCGTGCAATTGGA+GGG | 0.593875 | 4:+74719286 | MsG0480022614.01.T01:CDS |
| GATCACATTATGGGAATCCA+AGG | 0.596532 | 4:+74719659 | MsG0480022614.01.T01:CDS |
| ATGAGATTGAAGGAGAAGGC+TGG | 0.598435 | 4:+74719894 | MsG0480022614.01.T01:CDS |
| ATGTGAAGAAAATGTACGGA+GGG | 0.598596 | 4:+74718207 | MsG0480022614.01.T01:CDS |
| AGACAAAGGAGATGGCAAAG+AGG | 0.600946 | 4:-74719367 | None:intergenic |
| AAAAGTTAATAGGAAACTAA+GGG | 0.606602 | 4:+74720046 | MsG0480022614.01.T01:three_prime_UTR |
| ATGCACATGGAAATGATACA+TGG | 0.606888 | 4:+74718366 | MsG0480022614.01.T01:CDS |
| TCACCTTCCCTCCAATTGCA+CGG | 0.609277 | 4:-74719293 | None:intergenic |
| TTTAGCTAGAAATTGACTCG+TGG | 0.609523 | 4:+74720320 | MsG0480022614.01.T01:three_prime_UTR |
| TTCCATTATTCAATGCCACA+GGG | 0.610578 | 4:+74719413 | MsG0480022614.01.T01:CDS |
| GGGAGCCAGATAAGGAGGCA+TGG | 0.620410 | 4:+74719922 | MsG0480022614.01.T01:CDS |
| GGTATTTGTGAGAATGTTGG+AGG | 0.624181 | 4:+74718238 | MsG0480022614.01.T01:CDS |
| TAAGAAAATGTAGAAAGGCG+TGG | 0.624356 | 4:+74720243 | MsG0480022614.01.T01:three_prime_UTR |
| GGAAGTTCAAGAGAAGACAA+AGG | 0.628531 | 4:-74719381 | None:intergenic |
| AGGGAGTGGGAAGAGATTTG+GGG | 0.635409 | 4:+74718157 | MsG0480022614.01.T01:CDS |
| CTATGCATCAGCTTCCTCAA+GGG | 0.636887 | 4:+74719951 | MsG0480022614.01.T01:CDS |
| AGAATGTCTTTAGAGTACTC+AGG | 0.643445 | 4:-74719686 | None:intergenic |
| TATGTGGGAGCCAGATAAGG+AGG | 0.645828 | 4:+74719917 | MsG0480022614.01.T01:CDS |
| GTGCCACACCTTAATTAGTG+GGG | 0.647793 | 4:-74720072 | None:intergenic |
| GATGACCAAAGCAAATGCCA+AGG | 0.653162 | 4:-74718442 | None:intergenic |
| GGCGCGTGGAGAGTTTCCAA+AGG | 0.654333 | 4:+74718292 | MsG0480022614.01.T01:CDS |
| TATTCAGCGAAATTTCATCA+CGG | 0.662548 | 4:+74719730 | MsG0480022614.01.T01:CDS |
| TATGTGAAGAAAATGTACGG+AGG | 0.666492 | 4:+74718206 | MsG0480022614.01.T01:CDS |
| TTTCACAATAACGACCCTTG+AGG | 0.678121 | 4:-74719965 | None:intergenic |
| TGCCACACCTTAATTAGTGG+GGG | 0.683463 | 4:-74720071 | None:intergenic |
| TGCACATGGAAATGATACAT+GGG | 0.699531 | 4:+74718367 | MsG0480022614.01.T01:CDS |
| GATGTGTATAAGGTGGCGCG+TGG | 0.734044 | 4:+74718278 | MsG0480022614.01.T01:CDS |
| GGTAGTTGTAGTGATGCACA+TGG | 0.738222 | 4:+74718353 | MsG0480022614.01.T01:CDS |
| GTACACACACCTCATCCCTG+TGG | 0.760386 | 4:-74719428 | None:intergenic |
| AAGCTGGGATGTGTATAAGG+TGG | 0.761338 | 4:+74718271 | MsG0480022614.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATGAAGTAATAA+AGG | - | Chr4:74719771-74719790 | None:intergenic | 10.0% |
| !! | TATTACTTCATTTATTTATT+TGG | + | Chr4:74719772-74719791 | MsG0480022614.01.T01:intron | 10.0% |
| !!! | ATGATAATGTTAATTTAATA+AGG | - | Chr4:74719469-74719488 | None:intergenic | 10.0% |
| !! | AATAACAAAAATTACTAGAA+AGG | - | Chr4:74718577-74718596 | None:intergenic | 15.0% |
| !! | AGTGATTTAATTACTAAATA+TGG | - | Chr4:74718498-74718517 | None:intergenic | 15.0% |
| !! | ATAGAAAATATAAATATTGG+TGG | + | Chr4:74719996-74720015 | MsG0480022614.01.T01:CDS | 15.0% |
| !! | ATATTTAGTAATTAAATCAC+TGG | + | Chr4:74718497-74718516 | MsG0480022614.01.T01:intron | 15.0% |
| !! | GGAATAGAAAATATAAATAT+TGG | + | Chr4:74719993-74720012 | MsG0480022614.01.T01:CDS | 15.0% |
| !! | GTTAAATATTACTAGTAATA+TGG | - | Chr4:74718922-74718941 | None:intergenic | 15.0% |
| !! | TATCACTATTAAAAAAACAT+TGG | + | Chr4:74719805-74719824 | MsG0480022614.01.T01:intron | 15.0% |
| !! | TATTACTAGTAATATTTAAC+CGG | + | Chr4:74718922-74718941 | MsG0480022614.01.T01:intron | 15.0% |
| !! | TTAATCGTAATTAAATTTAC+TGG | + | Chr4:74719844-74719863 | MsG0480022614.01.T01:intron | 15.0% |
| !! | TTAATTAAGAAAATGTAGAA+AGG | + | Chr4:74720238-74720257 | MsG0480022614.01.T01:three_prime_UTR | 15.0% |
| !!! | ATCAAAAATCAAATCTTTTA+AGG | + | Chr4:74718120-74718139 | MsG0480022614.01.T01:five_prime_UTR | 15.0% |
| !!! | TAAAAAACAACATTTTTAGA+GGG | + | Chr4:74718071-74718090 | MsG0480022614.01.T01:five_prime_UTR | 15.0% |
| !! | AAAAAATGAAAGGTTTGAAA+TGG | - | Chr4:74718553-74718572 | None:intergenic | 20.0% |
| !! | AAAAAGTTAATAGGAAACTA+AGG | + | Chr4:74720045-74720064 | MsG0480022614.01.T01:three_prime_UTR | 20.0% |
| !! | AAAAGTTAATAGGAAACTAA+GGG | + | Chr4:74720046-74720065 | MsG0480022614.01.T01:three_prime_UTR | 20.0% |
| !! | AATATTACTAGTAATATGGA+TGG | - | Chr4:74718918-74718937 | None:intergenic | 20.0% |
| !! | AATATTTACAATTTCACATC+AGG | - | Chr4:74720163-74720182 | None:intergenic | 20.0% |
| !! | ACCATTAATTAACTTTATAG+AGG | + | Chr4:74719219-74719238 | MsG0480022614.01.T01:intron | 20.0% |
| !! | CTATAAAGTTAATTAATGGT+AGG | - | Chr4:74719219-74719238 | None:intergenic | 20.0% |
| !! | TCCTCTATAAAGTTAATTAA+TGG | - | Chr4:74719223-74719242 | None:intergenic | 20.0% |
| !!! | AAAAATGAAAGGTTTGAAAT+GGG | - | Chr4:74718552-74718571 | None:intergenic | 20.0% |
| !!! | AAAATCAAATCTTTTAAGGA+TGG | + | Chr4:74718124-74718143 | MsG0480022614.01.T01:exon | 20.0% |
| !!! | AAAGATTTGATTTTTGATTC+TGG | - | Chr4:74718118-74718137 | None:intergenic | 20.0% |
| !!! | AAAGTACAAATTTATGGTTT+TGG | + | Chr4:74720295-74720314 | MsG0480022614.01.T01:three_prime_UTR | 20.0% |
| !!! | AAGATTTGATTTTTGATTCT+GGG | - | Chr4:74718117-74718136 | None:intergenic | 20.0% |
| !!! | CTAAAAAACAACATTTTTAG+AGG | + | Chr4:74718070-74718089 | MsG0480022614.01.T01:five_prime_UTR | 20.0% |
| !!! | TCTTGATATATTTCTTCTTT+TGG | + | Chr4:74719547-74719566 | MsG0480022614.01.T01:intron | 20.0% |
| !!! | TGTTAATTTGATTAGATACT+TGG | + | Chr4:74719270-74719289 | MsG0480022614.01.T01:intron | 20.0% |
| !!! | TTTTTTTAATCATATAGCAC+AGG | + | Chr4:74719509-74719528 | MsG0480022614.01.T01:intron | 20.0% |
| ! | AAAATACCGTAGAAATTCTT+AGG | + | Chr4:74718739-74718758 | MsG0480022614.01.T01:intron | 25.0% |
| ! | AAAGAAATCCCAAATTCAAA+AGG | - | Chr4:74720220-74720239 | None:intergenic | 25.0% |
| ! | ACTTTCAAAAAAAAGGAACA+GGG | + | Chr4:74718653-74718672 | MsG0480022614.01.T01:intron | 25.0% |
| ! | ATCGTATGGAAAAAGTTAAT+AGG | + | Chr4:74720036-74720055 | MsG0480022614.01.T01:three_prime_UTR | 25.0% |
| ! | CTAGAAAGGTAAAAAATGAA+AGG | - | Chr4:74718563-74718582 | None:intergenic | 25.0% |
| ! | GAAGTAATAAAGGAAAATGA+TGG | - | Chr4:74719761-74719780 | None:intergenic | 25.0% |
| ! | GAATATGTGAAGAAAATGTA+CGG | + | Chr4:74718203-74718222 | MsG0480022614.01.T01:CDS | 25.0% |
| ! | TACAAAAAAAGACAAAACCA+TGG | - | Chr4:74719127-74719146 | None:intergenic | 25.0% |
| ! | TGTGCTAAAGTACAAATTTA+TGG | + | Chr4:74720289-74720308 | MsG0480022614.01.T01:three_prime_UTR | 25.0% |
| !! | AGTTTTCTTCCTTTTGAATT+TGG | + | Chr4:74720208-74720227 | MsG0480022614.01.T01:three_prime_UTR | 25.0% |
| !! | ATATAAGTGCTTTATTACCA+TGG | + | Chr4:74719107-74719126 | MsG0480022614.01.T01:intron | 25.0% |
| !! | GTTTTCTTCCTTTTGAATTT+GGG | + | Chr4:74720209-74720228 | MsG0480022614.01.T01:three_prime_UTR | 25.0% |
| !!! | ATTTTAGTGCTAGTATAACA+TGG | + | Chr4:74718618-74718637 | MsG0480022614.01.T01:intron | 25.0% |
| AGATATGGAGATCACATTAT+GGG | + | Chr4:74719650-74719669 | MsG0480022614.01.T01:CDS | 30.0% | |
| AGATTCAATTCATCATCCTT+TGG | - | Chr4:74718311-74718330 | None:intergenic | 30.0% | |
| ATGTGAAGATTGCATCATAT+GGG | - | Chr4:74719045-74719064 | None:intergenic | 30.0% | |
| ATTGCTAAATCAGATAAGAC+TGG | + | Chr4:74719614-74719633 | MsG0480022614.01.T01:CDS | 30.0% | |
| CACTTTCAAAAAAAAGGAAC+AGG | + | Chr4:74718652-74718671 | MsG0480022614.01.T01:intron | 30.0% | |
| CTTCTAATTCAGCTTTACAT+TGG | - | Chr4:74719160-74719179 | None:intergenic | 30.0% | |
| GATGAATTGAATCTGTATGA+TGG | + | Chr4:74718317-74718336 | MsG0480022614.01.T01:CDS | 30.0% | |
| GGAATTGAGATGTTTAGATA+TGG | + | Chr4:74719635-74719654 | MsG0480022614.01.T01:CDS | 30.0% | |
| TAGATATGGAGATCACATTA+TGG | + | Chr4:74719649-74719668 | MsG0480022614.01.T01:CDS | 30.0% | |
| TAGTGCGTTAAATATTCCAA+AGG | - | Chr4:74718778-74718797 | None:intergenic | 30.0% | |
| TATTCAGCGAAATTTCATCA+CGG | + | Chr4:74719730-74719749 | MsG0480022614.01.T01:CDS | 30.0% | |
| TGAAATTTCGCTGAATAAGA+CGG | - | Chr4:74719727-74719746 | None:intergenic | 30.0% | |
| ! | AAACTTTGCTATGAGATTGA+AGG | + | Chr4:74719884-74719903 | MsG0480022614.01.T01:CDS | 30.0% |
| ! | AGGGTGATAATGTTATGTTT+CGG | - | Chr4:74719350-74719369 | None:intergenic | 30.0% |
| !! | ATTCTAAAGTAGGAATCGTA+TGG | + | Chr4:74720022-74720041 | MsG0480022614.01.T01:exon | 30.0% |
| !! | TCTTTTAAGGATGGAGAAAA+TGG | + | Chr4:74718133-74718152 | MsG0480022614.01.T01:exon | 30.0% |
| !! | TTATGATATTTTGAGCTGTC+CGG | - | Chr4:74718944-74718963 | None:intergenic | 30.0% |
| !! | TTGGTGGTATATTCTAAAGT+AGG | + | Chr4:74720012-74720031 | MsG0480022614.01.T01:exon | 30.0% |
| !! | TTTTAGAGAGAGAAAGTTCA+AGG | - | Chr4:74718056-74718075 | None:intergenic | 30.0% |
| !!! | CTGTTCCTTTTTTTTGAAAG+TGG | - | Chr4:74718654-74718673 | None:intergenic | 30.0% |
| AAAATCCTTGGCATTTGCTT+TGG | + | Chr4:74718437-74718456 | MsG0480022614.01.T01:CDS | 35.0% | |
| AACAGGGATAAATACTGATG+TGG | + | Chr4:74718669-74718688 | MsG0480022614.01.T01:intron | 35.0% | |
| ACCAGTCCTAAGAATTTCTA+CGG | - | Chr4:74718748-74718767 | None:intergenic | 35.0% | |
| AGATTGAGAGATTGAGAGAA+AGG | - | Chr4:74718025-74718044 | None:intergenic | 35.0% | |
| ATCACACTTGTCTATATGCA+TGG | + | Chr4:74719019-74719038 | MsG0480022614.01.T01:intron | 35.0% | |
| ATGCACATGGAAATGATACA+TGG | + | Chr4:74718366-74718385 | MsG0480022614.01.T01:CDS | 35.0% | |
| ATGTGAAGAAAATGTACGGA+GGG | + | Chr4:74718207-74718226 | MsG0480022614.01.T01:CDS | 35.0% | |
| CATGTGAAGATTGCATCATA+TGG | - | Chr4:74719046-74719065 | None:intergenic | 35.0% | |
| GACATGAACAAGAAAATCCT+TGG | + | Chr4:74718425-74718444 | MsG0480022614.01.T01:CDS | 35.0% | |
| GATTGAGAGATTGAGAGAAA+GGG | - | Chr4:74718024-74718043 | None:intergenic | 35.0% | |
| GGTCGTTATTGTGAAAGAAA+TGG | + | Chr4:74719972-74719991 | MsG0480022614.01.T01:CDS | 35.0% | |
| GTGGTCCACTTTCAAAAAAA+AGG | + | Chr4:74718646-74718665 | MsG0480022614.01.T01:intron | 35.0% | |
| TAAGAAAATGTAGAAAGGCG+TGG | + | Chr4:74720243-74720262 | MsG0480022614.01.T01:three_prime_UTR | 35.0% | |
| TAAGGATGGAGAAAATGGTA+GGG | + | Chr4:74718138-74718157 | MsG0480022614.01.T01:exon | 35.0% | |
| TATGTGAAGAAAATGTACGG+AGG | + | Chr4:74718206-74718225 | MsG0480022614.01.T01:CDS | 35.0% | |
| TGCACATGGAAATGATACAT+GGG | + | Chr4:74718367-74718386 | MsG0480022614.01.T01:CDS | 35.0% | |
| TTAAGGATGGAGAAAATGGT+AGG | + | Chr4:74718137-74718156 | MsG0480022614.01.T01:exon | 35.0% | |
| TTCCATTATTCAATGCCACA+GGG | + | Chr4:74719413-74719432 | MsG0480022614.01.T01:CDS | 35.0% | |
| TTTAGCAATCACTTCAGCTT+TGG | - | Chr4:74719603-74719622 | None:intergenic | 35.0% | |
| TTTCCATTATTCAATGCCAC+AGG | + | Chr4:74719412-74719431 | MsG0480022614.01.T01:CDS | 35.0% | |
| ! | CGTTACTTTAGTTGTTCGTT+TGG | + | Chr4:74718870-74718889 | MsG0480022614.01.T01:intron | 35.0% |
| ! | TAACGCACTATACTCTAAAG+TGG | + | Chr4:74718788-74718807 | MsG0480022614.01.T01:intron | 35.0% |
| ! | TGAATAATGGAAAGCTTCGT+TGG | - | Chr4:74719405-74719424 | None:intergenic | 35.0% |
| ! | TGAGAGAAAGGGAATTGTTT+TGG | - | Chr4:74718013-74718032 | None:intergenic | 35.0% |
| ! | TTACTGGCTAATGTAATGAC+AGG | + | Chr4:74719860-74719879 | MsG0480022614.01.T01:intron | 35.0% |
| !! | AGAATGTCTTTAGAGTACTC+AGG | - | Chr4:74719689-74719708 | None:intergenic | 35.0% |
| !! | TTAGCTAGAAATTGACTCGT+GGG | + | Chr4:74720321-74720340 | MsG0480022614.01.T01:three_prime_UTR | 35.0% |
| !! | TTTAGCTAGAAATTGACTCG+TGG | + | Chr4:74720320-74720339 | MsG0480022614.01.T01:three_prime_UTR | 35.0% |
| !! | TTTTTGATTCTGGGTTTCTC+CGG | - | Chr4:74718108-74718127 | None:intergenic | 35.0% |
| !!! | AAAATGTACGGAGGGTATTT+TGG | + | Chr4:74718215-74718234 | MsG0480022614.01.T01:CDS | 35.0% |
| !!! | AAATGTACGGAGGGTATTTT+GGG | + | Chr4:74718216-74718235 | MsG0480022614.01.T01:CDS | 35.0% |
| !!! | TATGATGGTTTTGTGATCAC+TGG | + | Chr4:74718332-74718351 | MsG0480022614.01.T01:CDS | 35.0% |
| ACCGTAGAAATTCTTAGGAC+TGG | + | Chr4:74718744-74718763 | MsG0480022614.01.T01:intron | 40.0% | |
| ATGTGCCACACCTTAATTAG+TGG | - | Chr4:74720077-74720096 | None:intergenic | 40.0% | |
| GATCACATTATGGGAATCCA+AGG | + | Chr4:74719659-74719678 | MsG0480022614.01.T01:CDS | 40.0% | |
| GGAAGTTCAAGAGAAGACAA+AGG | - | Chr4:74719384-74719403 | None:intergenic | 40.0% | |
| GGTATTTGTGAGAATGTTGG+AGG | + | Chr4:74718238-74718257 | MsG0480022614.01.T01:CDS | 40.0% | |
| TAACTAACAGCTTGACGTGT+CGG | + | Chr4:74718699-74718718 | MsG0480022614.01.T01:intron | 40.0% | |
| TCAAGAGAAGACAAAGGAGA+TGG | - | Chr4:74719378-74719397 | None:intergenic | 40.0% | |
| TGAAAGCTGGGATGTGTATA+AGG | + | Chr4:74718268-74718287 | MsG0480022614.01.T01:CDS | 40.0% | |
| TGCTATGAGATTGAAGGAGA+AGG | + | Chr4:74719890-74719909 | MsG0480022614.01.T01:CDS | 40.0% | |
| TGTGCCACACCTTAATTAGT+GGG | - | Chr4:74720076-74720095 | None:intergenic | 40.0% | |
| TTTCACAATAACGACCCTTG+AGG | - | Chr4:74719968-74719987 | None:intergenic | 40.0% | |
| ! | ATCCCTGTGGCATTGAATAA+TGG | - | Chr4:74719418-74719437 | None:intergenic | 40.0% |
| ! | TGGGGTATTTGTGAGAATGT+TGG | + | Chr4:74718235-74718254 | MsG0480022614.01.T01:CDS | 40.0% |
| !!! | AATGTACGGAGGGTATTTTG+GGG | + | Chr4:74718217-74718236 | MsG0480022614.01.T01:CDS | 40.0% |
| !!! | TTTTTTGAAAGTGGACCACC+TGG | - | Chr4:74718645-74718664 | None:intergenic | 40.0% |
| AACACATGCATCTAGCTAGC+TGG | - | Chr4:74720103-74720122 | None:intergenic | 45.0% | |
| AAGCTGGGATGTGTATAAGG+TGG | + | Chr4:74718271-74718290 | MsG0480022614.01.T01:CDS | 45.0% | |
| ACTATGCATCAGCTTCCTCA+AGG | + | Chr4:74719950-74719969 | MsG0480022614.01.T01:CDS | 45.0% | |
| AGACAAAGGAGATGGCAAAG+AGG | - | Chr4:74719370-74719389 | None:intergenic | 45.0% | |
| ATGAGATTGAAGGAGAAGGC+TGG | + | Chr4:74719894-74719913 | MsG0480022614.01.T01:CDS | 45.0% | |
| ATGGAGAAAATGGTAGGGAG+TGG | + | Chr4:74718143-74718162 | MsG0480022614.01.T01:CDS | 45.0% | |
| CTAGTATAACATGGTCCAGG+TGG | + | Chr4:74718627-74718646 | MsG0480022614.01.T01:intron | 45.0% | |
| CTATGCATCAGCTTCCTCAA+GGG | + | Chr4:74719951-74719970 | MsG0480022614.01.T01:CDS | 45.0% | |
| GACAAAGGAGATGGCAAAGA+GGG | - | Chr4:74719369-74719388 | None:intergenic | 45.0% | |
| GATGACCAAAGCAAATGCCA+AGG | - | Chr4:74718445-74718464 | None:intergenic | 45.0% | |
| GGTAGTTGTAGTGATGCACA+TGG | + | Chr4:74718353-74718372 | MsG0480022614.01.T01:CDS | 45.0% | |
| GTGAGAATGTTGGAGGAAGA+AGG | + | Chr4:74718245-74718264 | MsG0480022614.01.T01:CDS | 45.0% | |
| GTGCCACACCTTAATTAGTG+GGG | - | Chr4:74720075-74720094 | None:intergenic | 45.0% | |
| GTGCTAGTATAACATGGTCC+AGG | + | Chr4:74718624-74718643 | MsG0480022614.01.T01:intron | 45.0% | |
| TACCCCCACTAATTAAGGTG+TGG | + | Chr4:74720069-74720088 | MsG0480022614.01.T01:three_prime_UTR | 45.0% | |
| TAGATACTTGGCCGTGCAAT+TGG | + | Chr4:74719282-74719301 | MsG0480022614.01.T01:intron | 45.0% | |
| TAGGGAGTGGGAAGAGATTT+GGG | + | Chr4:74718156-74718175 | MsG0480022614.01.T01:CDS | 45.0% | |
| TATTCAATGCCACAGGGATG+AGG | + | Chr4:74719419-74719438 | MsG0480022614.01.T01:CDS | 45.0% | |
| TGCCACACCTTAATTAGTGG+GGG | - | Chr4:74720074-74720093 | None:intergenic | 45.0% | |
| TGGAGAAAATGGTAGGGAGT+GGG | + | Chr4:74718144-74718163 | MsG0480022614.01.T01:CDS | 45.0% | |
| TGGCATTTGCTTTGGTCATC+AGG | + | Chr4:74718445-74718464 | MsG0480022614.01.T01:CDS | 45.0% | |
| ! | TAGAGTACTCAGGATGACCT+TGG | - | Chr4:74719679-74719698 | None:intergenic | 45.0% |
| !! | AAGGGTACCCCCACTAATTA+AGG | + | Chr4:74720064-74720083 | MsG0480022614.01.T01:three_prime_UTR | 45.0% |
| !! | CTTGACGTGTCGGTGTTTTA+TGG | + | Chr4:74718709-74718728 | MsG0480022614.01.T01:intron | 45.0% |
| !! | TTAGAGGGAGAAAGCATCAC+CGG | + | Chr4:74718086-74718105 | MsG0480022614.01.T01:five_prime_UTR | 45.0% |
| AAGGTGACTCGATCTCCAAC+TGG | + | Chr4:74719309-74719328 | MsG0480022614.01.T01:CDS | 50.0% | |
| AGGGAGTGGGAAGAGATTTG+GGG | + | Chr4:74718157-74718176 | MsG0480022614.01.T01:CDS | 50.0% | |
| ATACTTGGCCGTGCAATTGG+AGG | + | Chr4:74719285-74719304 | MsG0480022614.01.T01:CDS | 50.0% | |
| CTCTTCCATGCCTCCTTATC+TGG | - | Chr4:74719930-74719949 | None:intergenic | 50.0% | |
| GAAGGAGAAGGCTGGTATGT+GGG | + | Chr4:74719902-74719921 | MsG0480022614.01.T01:CDS | 50.0% | |
| GGAGGAAGAAGGTGAAAGCT+GGG | + | Chr4:74718256-74718275 | MsG0480022614.01.T01:CDS | 50.0% | |
| GTAGGGAGTGGGAAGAGATT+TGG | + | Chr4:74718155-74718174 | MsG0480022614.01.T01:CDS | 50.0% | |
| TACTTGGCCGTGCAATTGGA+GGG | + | Chr4:74719286-74719305 | MsG0480022614.01.T01:CDS | 50.0% | |
| TATGTGGGAGCCAGATAAGG+AGG | + | Chr4:74719917-74719936 | MsG0480022614.01.T01:CDS | 50.0% | |
| TCACCTTCCCTCCAATTGCA+CGG | - | Chr4:74719296-74719315 | None:intergenic | 50.0% | |
| TGAAGGAGAAGGCTGGTATG+TGG | + | Chr4:74719901-74719920 | MsG0480022614.01.T01:CDS | 50.0% | |
| TGGAGGAAGAAGGTGAAAGC+TGG | + | Chr4:74718255-74718274 | MsG0480022614.01.T01:CDS | 50.0% | |
| TGGTATGTGGGAGCCAGATA+AGG | + | Chr4:74719914-74719933 | MsG0480022614.01.T01:CDS | 50.0% | |
| ! | GCAATCACTTCAGCTTTGGC+AGG | - | Chr4:74719599-74719618 | None:intergenic | 50.0% |
| !! | AGGACTGGTTCTCTCTCCTT+TGG | + | Chr4:74718759-74718778 | MsG0480022614.01.T01:intron | 50.0% |
| ACACCAATGTCCCAGCCAGT+TGG | - | Chr4:74719327-74719346 | None:intergenic | 55.0% | |
| GACTCGATCTCCAACTGGCT+GGG | + | Chr4:74719314-74719333 | MsG0480022614.01.T01:CDS | 55.0% | |
| GATGTGTATAAGGTGGCGCG+TGG | + | Chr4:74718278-74718297 | MsG0480022614.01.T01:CDS | 55.0% | |
| GTACACACACCTCATCCCTG+TGG | - | Chr4:74719431-74719450 | None:intergenic | 55.0% | |
| TCTCCAACTGGCTGGGACAT+TGG | + | Chr4:74719321-74719340 | MsG0480022614.01.T01:CDS | 55.0% | |
| TGACTCGATCTCCAACTGGC+TGG | + | Chr4:74719313-74719332 | MsG0480022614.01.T01:CDS | 55.0% | |
| GGCGCGTGGAGAGTTTCCAA+AGG | + | Chr4:74718292-74718311 | MsG0480022614.01.T01:CDS | 60.0% | |
| GGGAGCCAGATAAGGAGGCA+TGG | + | Chr4:74719922-74719941 | MsG0480022614.01.T01:CDS | 60.0% | |
| TGGCCGTGCAATTGGAGGGA+AGG | + | Chr4:74719290-74719309 | MsG0480022614.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 74717991 | 74720358 | 74717991 | ID=MsG0480022614.01;Name=MsG0480022614.01 |
| Chr4 | mRNA | 74717991 | 74720358 | 74717991 | ID=MsG0480022614.01.T01;Parent=MsG0480022614.01;Name=MsG0480022614.01.T01;_AED=0.45;_eAED=0.45;_QI=152|1|1|1|1|1|4|330|264 |
| Chr4 | exon | 74717991 | 74718466 | 74717991 | ID=MsG0480022614.01.T01:exon:5511;Parent=MsG0480022614.01.T01 |
| Chr4 | exon | 74719285 | 74719440 | 74719285 | ID=MsG0480022614.01.T01:exon:5512;Parent=MsG0480022614.01.T01 |
| Chr4 | exon | 74719584 | 74719751 | 74719584 | ID=MsG0480022614.01.T01:exon:5513;Parent=MsG0480022614.01.T01 |
| Chr4 | exon | 74719882 | 74720358 | 74719882 | ID=MsG0480022614.01.T01:exon:5514;Parent=MsG0480022614.01.T01 |
| Chr4 | five_prime_UTR | 74717991 | 74718142 | 74717991 | ID=MsG0480022614.01.T01:five_prime_utr;Parent=MsG0480022614.01.T01 |
| Chr4 | CDS | 74718143 | 74718466 | 74718143 | ID=MsG0480022614.01.T01:cds;Parent=MsG0480022614.01.T01 |
| Chr4 | CDS | 74719285 | 74719440 | 74719285 | ID=MsG0480022614.01.T01:cds;Parent=MsG0480022614.01.T01 |
| Chr4 | CDS | 74719584 | 74719751 | 74719584 | ID=MsG0480022614.01.T01:cds;Parent=MsG0480022614.01.T01 |
| Chr4 | CDS | 74719882 | 74720028 | 74719882 | ID=MsG0480022614.01.T01:cds;Parent=MsG0480022614.01.T01 |
| Chr4 | three_prime_UTR | 74720029 | 74720358 | 74720029 | ID=MsG0480022614.01.T01:three_prime_utr;Parent=MsG0480022614.01.T01 |
| Gene Sequence |
| Protein sequence |
