AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047435.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047435.01.T01 MTR_4g127420 97.391 230 2 2 1 229 153 379 1.71e-160 449
MsG0880047435.01.T01 MTR_5g072780 47.009 117 57 3 112 228 99 210 3.58e-22 90.9
MsG0880047435.01.T01 MTR_2g038010 38.462 169 71 6 7 158 159 311 8.59e-22 91.7
MsG0880047435.01.T01 MTR_7g032240 34.783 161 67 5 103 228 188 345 5.74e-18 81.6
MsG0880047435.01.T01 MTR_1g110870 44.444 108 48 4 133 228 311 418 5.91e-17 79.3
MsG0880047435.01.T01 MTR_8g104190 42.727 110 35 3 139 228 293 394 7.75e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047435.01.T01 AT5G57180 47.388 268 82 10 12 229 162 420 5.33e-55 181
MsG0880047435.01.T01 AT5G57180 47.191 267 82 10 12 228 162 419 6.70e-54 179
MsG0880047435.01.T01 AT4G25990 47.266 256 77 10 15 229 140 378 5.75e-52 172
MsG0880047435.01.T01 AT4G25990 47.266 256 77 10 15 229 140 378 2.35e-51 172
MsG0880047435.01.T01 AT4G25990 47.059 255 77 10 15 228 140 377 5.44e-51 170
MsG0880047435.01.T01 AT5G57180 38.532 218 79 9 12 179 162 374 6.21e-24 98.6
MsG0880047435.01.T01 AT5G57180 38.532 218 79 9 12 179 162 374 6.21e-24 98.6
MsG0880047435.01.T01 AT1G25440 36.242 149 78 2 94 228 252 397 3.66e-18 82.8
MsG0880047435.01.T01 AT5G14370 44.545 110 40 4 135 228 226 330 3.93e-18 82.0
MsG0880047435.01.T01 AT1G07050 50.538 93 39 2 137 229 103 188 6.32e-18 79.3
MsG0880047435.01.T01 AT1G07050 50.000 92 39 2 137 228 103 187 3.03e-17 77.4
MsG0880047435.01.T01 AT1G73870 45.370 108 45 3 135 228 274 381 6.02e-17 79.3
MsG0880047435.01.T01 AT1G68520 39.474 114 47 2 133 228 284 393 1.90e-15 75.1
MsG0880047435.01.T01 AT1G49130 34.815 135 65 4 101 228 189 307 5.88e-12 64.3
MsG0880047435.01.T01 AT1G49130 34.815 135 65 4 101 228 196 314 6.27e-12 64.3

Find 153 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACCGACACTGCATATTT+TGG 0.094471 8:-86278973 None:intergenic
TTCCCGAATTATATGAATTA+AGG 0.146640 8:-86277965 None:intergenic
TATGATATGGTTATGATAAT+TGG 0.154427 8:+86280224 MsG0880047435.01.T01:three_prime_UTR
TTCCCTTAATTCATATAATT+CGG 0.233206 8:+86277962 MsG0880047435.01.T01:five_prime_UTR
TGACATGGTTTCACCGGTTT+TGG 0.239666 8:-86278648 None:intergenic
ATTGATCATACCTTCATTCT+TGG 0.253571 8:-86280154 None:intergenic
GATTTATTATTGTTATTGTT+GGG 0.253877 8:-86278512 None:intergenic
AGCTTCGTTGTAGGTTTGAT+TGG 0.274583 8:-86278429 None:intergenic
TCTCATCCATGGATTGGTTT+TGG 0.279149 8:+86278837 MsG0880047435.01.T01:CDS
TGTCACAAATAGATTTGTTA+TGG 0.306145 8:+86280008 MsG0880047435.01.T01:CDS
CAATAATAAATCCACCAAAT+TGG 0.309576 8:+86278523 MsG0880047435.01.T01:five_prime_UTR
ACATACATTAACATCGTTTC+CGG 0.311561 8:-86279195 None:intergenic
TTGGCAAGTGAAATTCAAAA+AGG 0.312711 8:-86278216 None:intergenic
TCCCTTAATTCATATAATTC+GGG 0.314776 8:+86277963 MsG0880047435.01.T01:five_prime_UTR
GGGAGGAGAGAGAGGAAGAG+AGG 0.321435 8:-86277786 None:intergenic
AGGAAATCTAGTTTATGATA+TGG 0.321517 8:+86280211 MsG0880047435.01.T01:three_prime_UTR
TTGGGATTGGAGAAGAGGTT+TGG 0.329352 8:-86278476 None:intergenic
AACAAGCCTAACGCTTGTTT+TGG 0.329462 8:+86280429 MsG0880047435.01.T01:three_prime_UTR
TGCAGTCTGCACCAATGTTT+AGG 0.343838 8:+86280371 MsG0880047435.01.T01:three_prime_UTR
GGATTTATTATTGTTATTGT+TGG 0.348745 8:-86278513 None:intergenic
GCCATGTTGATGAAGGAAAT+TGG 0.353307 8:+86278913 MsG0880047435.01.T01:CDS
TTTCATACTCTTCAATTCAT+TGG 0.353990 8:+86277840 MsG0880047435.01.T01:five_prime_UTR
TCCCGAATTATATGAATTAA+GGG 0.360257 8:-86277964 None:intergenic
GGAGAGAGAGGAAGAGAGGG+GGG 0.361261 8:-86277782 None:intergenic
AATTGAATTACGACGGTGTT+CGG 0.364551 8:+86279114 MsG0880047435.01.T01:CDS
ACAAAGAACCTGAAATTGAT+TGG 0.366595 8:-86278020 None:intergenic
GGAGGAGAGAGAGGAAGAGA+GGG 0.371369 8:-86277785 None:intergenic
GGGCTTGCCGTAAAGTAAAA+AGG 0.371473 8:-86278610 None:intergenic
AGTTCTTTCTTGCCCGTTGT+GGG 0.372766 8:-86277553 None:intergenic
GAGAGTGTGTAGATAGATAT+AGG 0.373025 8:-86277721 None:intergenic
AGGAGAGAGAGGAAGAGAGG+GGG 0.373796 8:-86277783 None:intergenic
GAGGAGAGAGAGGAAGAGAG+GGG 0.374638 8:-86277784 None:intergenic
ACGGGAGAGGGAAGTTAAAA+AGG 0.376403 8:-86277757 None:intergenic
GGGAAATTCGACTTCCGGTT+AGG 0.378755 8:+86278861 MsG0880047435.01.T01:CDS
AGGAAATTGGTGGAATTTCC+CGG 0.382166 8:+86278926 MsG0880047435.01.T01:CDS
AATCATCACCACCATGTTCA+TGG 0.382343 8:+86278301 MsG0880047435.01.T01:five_prime_UTR
AATTGCATATGAGTGGAAAT+TGG 0.385596 8:-86278186 None:intergenic
AGAAAATCAGATATCAAGTT+AGG 0.387014 8:+86280110 MsG0880047435.01.T01:CDS
TGGGATTGGAGAAGAGGTTT+GGG 0.389394 8:-86278475 None:intergenic
GTCACAAATAGATTTGTTAT+GGG 0.395534 8:+86280009 MsG0880047435.01.T01:CDS
GTTATAAGTGAGATGGAGAC+AGG 0.395574 8:-86277809 None:intergenic
GAGAGTAAAGAAAAGGAAAT+TGG 0.397913 8:-86277910 None:intergenic
ATTCTAAAACTAAACCCCTT+TGG 0.408565 8:+86278054 MsG0880047435.01.T01:five_prime_UTR
GAGTGTTGCAGCTTCGTTGT+AGG 0.410073 8:-86278438 None:intergenic
TCTTCTTCTCATCCATGGAT+TGG 0.411520 8:+86278831 MsG0880047435.01.T01:CDS
TTAAGGGAAAAGCGAGGGGC+AGG 0.413489 8:-86277948 None:intergenic
CCCCTTTGTGGTTGTTGCGT+TGG 0.419219 8:+86280286 MsG0880047435.01.T01:three_prime_UTR
CAGTTCTTTCTTGCCCGTTG+TGG 0.424215 8:-86277554 None:intergenic
TTTGGCTCCGACTGGAAATC+GGG 0.427983 8:-86278630 None:intergenic
GGAAAGTACAGTGAAGAAAG+AGG 0.428539 8:-86277867 None:intergenic
TGAGATTGGGATTGGAGAAG+AGG 0.428990 8:-86278481 None:intergenic
GGTTTGGGTATGCAGTGTTA+AGG 0.430567 8:-86278460 None:intergenic
GAATGCAGAATTGAAAGAAA+TGG 0.436941 8:+86279058 MsG0880047435.01.T01:CDS
TTGGCGGGAAATTCGACTTC+CGG 0.439230 8:+86278856 MsG0880047435.01.T01:CDS
GCTTCGTTGTAGGTTTGATT+GGG 0.439703 8:-86278428 None:intergenic
TTTCCGGAAGCATCGGAGAC+AGG 0.440046 8:-86279179 None:intergenic
TTGTTATGGGAGAATGGAGG+AGG 0.440896 8:+86280022 MsG0880047435.01.T01:CDS
CACCTCTCTGTAATCCTAAC+CGG 0.443822 8:-86278875 None:intergenic
ATAGATTTGTTATGGGAGAA+TGG 0.448843 8:+86280016 MsG0880047435.01.T01:CDS
TATAAGTGAGATGGAGACAG+GGG 0.450803 8:-86277807 None:intergenic
CATCGGCGAACGGCGTTCCT+CGG 0.459344 8:-86279151 None:intergenic
CACCATTGAACTAATCTCTC+CGG 0.459584 8:-86278676 None:intergenic
TGGGAGAATGGAGGAGGAAG+TGG 0.459617 8:+86280028 MsG0880047435.01.T01:CDS
AGCCCTGTCTCCGATGCTTC+CGG 0.466072 8:+86279176 MsG0880047435.01.T01:CDS
ACGTCTCTTCTTCTCATCCA+TGG 0.467379 8:+86278826 MsG0880047435.01.T01:CDS
ACTTTCCTTTCTCCTCTCCT+CGG 0.467599 8:+86277883 MsG0880047435.01.T01:five_prime_UTR
ACGACGGTGTTCGGAAAGCT+TGG 0.468820 8:+86279123 MsG0880047435.01.T01:CDS
GAATGGTAGTGTCCCACAAC+GGG 0.470584 8:+86277541 MsG0880047435.01.T01:five_prime_UTR
ACCAACGCAACAACCACAAA+GGG 0.472287 8:-86280287 None:intergenic
ATTTATTATTGTTATTGTTG+GGG 0.476105 8:-86278511 None:intergenic
ATGGATAGATCCTCAAAAGT+TGG 0.481071 8:-86280320 None:intergenic
TTTCCAGTCGGAGCCAAAAC+CGG 0.481789 8:+86278635 MsG0880047435.01.T01:five_prime_UTR
TATAAGAGTTATAAGTGAGA+TGG 0.483571 8:-86277816 None:intergenic
ACTAGAAGAAATTAGAAAAG+AGG 0.485084 8:+86280191 MsG0880047435.01.T01:three_prime_UTR
CGTTCTCATCTGTATTACTA+AGG 0.488690 8:+86277594 MsG0880047435.01.T01:five_prime_UTR
CAAATGAAGATAAAGCCAAA+GGG 0.494467 8:-86278069 None:intergenic
CGGTGGTAAGACGGCGGCGC+CGG 0.496178 8:+86278989 MsG0880047435.01.T01:CDS
GGACTCTGACATGGTTTCAC+CGG 0.498907 8:-86278654 None:intergenic
CTTTCCTTTCTCCTCTCCTC+GGG 0.503301 8:+86277884 MsG0880047435.01.T01:five_prime_UTR
AACATCGTTTCCGGAAGCAT+CGG 0.505047 8:-86279186 None:intergenic
ATGCAGTGTCGGTGGTAAGA+CGG 0.515154 8:+86278980 MsG0880047435.01.T01:CDS
TGGAAATTGGCGAAGAAATG+AGG 0.518508 8:-86278173 None:intergenic
GATTCAGAGATTGTTGAAGA+AGG 0.524561 8:-86278351 None:intergenic
TCCCGGAGAGATTAGTTCAA+TGG 0.528675 8:+86278674 MsG0880047435.01.T01:exon
ACCAATTTCCTTCATCAACA+TGG 0.530695 8:-86278914 None:intergenic
GAAAGTACAGTGAAGAAAGA+GGG 0.535399 8:-86277866 None:intergenic
GAATCGCCAAAGTTGAAAAG+TGG 0.536005 8:+86279080 MsG0880047435.01.T01:CDS
AAGTGGCGAGAGTAAAGAAA+AGG 0.536203 8:-86277917 None:intergenic
AAAGAAGAAGGTTGTTGCGG+TGG 0.538258 8:+86279028 MsG0880047435.01.T01:CDS
GCTCTTCGCCATGTTGATGA+AGG 0.541149 8:+86278906 MsG0880047435.01.T01:CDS
TTATAAGTGAGATGGAGACA+GGG 0.541715 8:-86277808 None:intergenic
ATCGGAGACAGGGCTGTCAT+CGG 0.545065 8:-86279168 None:intergenic
ACCATTGAACTAATCTCTCC+GGG 0.545916 8:-86278675 None:intergenic
ATGAATTAAGGGAAAAGCGA+GGG 0.546681 8:-86277953 None:intergenic
AGAAGGAATTGATAGCATCA+TGG 0.548899 8:+86278776 MsG0880047435.01.T01:CDS
GAAGGAATTGATAGCATCAT+GGG 0.550516 8:+86278777 MsG0880047435.01.T01:CDS
GTGTCCCGAGGAGAGGAGAA+AGG 0.555600 8:-86277888 None:intergenic
TCATCTGTATTACTAAGGTA+AGG 0.557379 8:+86277599 MsG0880047435.01.T01:five_prime_UTR
TTCCCGCCAAAACCAATCCA+TGG 0.558777 8:-86278843 None:intergenic
CTCGACGAGGAAATTGAAGA+AGG 0.561335 8:+86278759 MsG0880047435.01.T01:CDS
ATTGGCGAAGAAATGAGGTT+AGG 0.566324 8:-86278168 None:intergenic
ATATAGCCAAAACAAGCGTT+AGG 0.568478 8:-86280435 None:intergenic
CGGTTAGGATTACAGAGAGG+TGG 0.569382 8:+86278876 MsG0880047435.01.T01:CDS
TTCTTTGTAACGCAGCACGC+TGG 0.571082 8:-86280062 None:intergenic
TTCCGGAAGCATCGGAGACA+GGG 0.571094 8:-86279178 None:intergenic
AGATCGACGGCCAAGAATGA+AGG 0.572545 8:+86280144 MsG0880047435.01.T01:CDS
GTGAAACCATGTCAGAGTCC+CGG 0.575623 8:+86278657 MsG0880047435.01.T01:five_prime_UTR
AATTAAGAATTGCATATGAG+TGG 0.578762 8:-86278193 None:intergenic
AATCAGATATCAAGTTAGGA+AGG 0.579412 8:+86280114 MsG0880047435.01.T01:CDS
TAAGACGGCGGCGCCGGTGA+CGG 0.581889 8:+86278995 MsG0880047435.01.T01:CDS
GGAACAGGAGGAAGAACCAT+CGG 0.583201 8:+86278259 MsG0880047435.01.T01:five_prime_UTR
GAACAGGAGGAAGAACCATC+GGG 0.586253 8:+86278260 MsG0880047435.01.T01:five_prime_UTR
TAAGGGAAAAGCGAGGGGCA+GGG 0.591220 8:-86277947 None:intergenic
ATCTCTCCGGGACTCTGACA+TGG 0.592091 8:-86278663 None:intergenic
GACCAACGCAACAACCACAA+AGG 0.593303 8:-86280288 None:intergenic
GAAATTGGTGTCCCGAGGAG+AGG 0.598463 8:-86277895 None:intergenic
AGGAGGAAGAACCATCGGGT+TGG 0.598540 8:+86278264 MsG0880047435.01.T01:five_prime_UTR
ACAGGGCTGTCATCGGCGAA+CGG 0.603353 8:-86279161 None:intergenic
CATAAAGAAAACCTAAACAT+TGG 0.606506 8:-86280382 None:intergenic
ACAAATGAAGATAAAGCCAA+AGG 0.607641 8:-86278070 None:intergenic
CCCAAAATATGCAGTGTCGG+TGG 0.613838 8:+86278972 MsG0880047435.01.T01:CDS
CTATCTACACACTCTCTCAA+CGG 0.619721 8:+86277728 MsG0880047435.01.T01:five_prime_UTR
CATCATGGGAGGTAGAATTG+AGG 0.620329 8:+86278791 MsG0880047435.01.T01:CDS
TCGCCCAAAATATGCAGTGT+CGG 0.623873 8:+86278969 MsG0880047435.01.T01:CDS
GATTTGTTATGGGAGAATGG+AGG 0.628311 8:+86280019 MsG0880047435.01.T01:CDS
AACATACACTTGCAGAGTGG+AGG 0.630945 8:-86277627 None:intergenic
CTTAGTAATACAGATGAGAA+CGG 0.632156 8:-86277593 None:intergenic
GGAAGGTCAATGCAGATCGA+CGG 0.632746 8:+86280131 MsG0880047435.01.T01:CDS
CTAATCTAAATCCAACCCGA+TGG 0.633265 8:-86278275 None:intergenic
CGGCAAGCCCGATTTCCAGT+CGG 0.636352 8:+86278623 MsG0880047435.01.T01:five_prime_UTR
AGGGGCAGGGCATTGCAAAG+TGG 0.639064 8:-86277934 None:intergenic
ATAAGTGAGATGGAGACAGG+GGG 0.645251 8:-86277806 None:intergenic
CGCGGAATCAATACTCGACG+AGG 0.646026 8:+86278746 MsG0880047435.01.T01:CDS
AAAAGGAAATTGGTGTCCCG+AGG 0.657558 8:-86277900 None:intergenic
CGGAAAGCTTGGTCTGACCG+AGG 0.657705 8:+86279134 MsG0880047435.01.T01:CDS
TATGAATTAAGGGAAAAGCG+AGG 0.659203 8:-86277954 None:intergenic
TGAATGGTAGTGTCCCACAA+CGG 0.671105 8:+86277540 None:intergenic
AAATGAAGATAAAGCCAAAG+GGG 0.671572 8:-86278068 None:intergenic
TTTGTGGTGTAGATTGCAAG+CGG 0.673936 8:-86278384 None:intergenic
GATGTTCGACTCCATGAACA+TGG 0.682341 8:-86278312 None:intergenic
TTGTTGAAATTGAATTACGA+CGG 0.684346 8:+86279107 MsG0880047435.01.T01:CDS
CAACGCAACAACCACAAAGG+GGG 0.685338 8:-86280285 None:intergenic
AGTAACATACACTTGCAGAG+TGG 0.686837 8:-86277630 None:intergenic
CAGTGTCGGTGGTAAGACGG+CGG 0.687348 8:+86278983 MsG0880047435.01.T01:CDS
TGAATTAAGGGAAAAGCGAG+GGG 0.690437 8:-86277952 None:intergenic
GGAATTGATAGCATCATGGG+AGG 0.697923 8:+86278780 MsG0880047435.01.T01:CDS
ATGTTGATGAAGGAAATTGG+TGG 0.707203 8:+86278916 MsG0880047435.01.T01:CDS
AGTACAGTGAAGAAAGAGGG+TGG 0.717654 8:-86277863 None:intergenic
CCAACGCAACAACCACAAAG+GGG 0.718227 8:-86280286 None:intergenic
AGTAATACAGATGAGAACGG+AGG 0.736322 8:-86277590 None:intergenic
TTCCGGTTAGGATTACAGAG+AGG 0.750478 8:+86278873 MsG0880047435.01.T01:CDS
AAATTGGTGGAATTTCCCGG+CGG 0.816024 8:+86278929 MsG0880047435.01.T01:CDS
GTTCGACTCCATGAACATGG+TGG 0.820791 8:-86278309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAAGTAAAAAATGAA+TGG - Chr8:86279529-86279548 None:intergenic 15.0%
!! AAGTAAAGTAAAAAATGAAT+GGG - Chr8:86279528-86279547 None:intergenic 15.0%
!! ATTCTCTTACAATATTTAAA+TGG + Chr8:86279590-86279609 MsG0880047435.01.T01:intron 15.0%
!! TTCTCTTACAATATTTAAAT+GGG + Chr8:86279591-86279610 MsG0880047435.01.T01:intron 15.0%
!!! ATTTATTATTGTTATTGTTG+GGG - Chr8:86278514-86278533 None:intergenic 15.0%
!!! ATTTTTTGTGAAATAGAAAA+AGG - Chr8:86279564-86279583 None:intergenic 15.0%
!!! GATTTATTATTGTTATTGTT+GGG - Chr8:86278515-86278534 None:intergenic 15.0%
!! AAAAAAAAAAAAAGAGAGAG+AGG - Chr8:86279406-86279425 None:intergenic 20.0%
!! AAAAAAAAAAAAGAGAGAGA+GGG - Chr8:86279405-86279424 None:intergenic 20.0%
!! AACGAATTGAAAAATTGAAA+TGG - Chr8:86280342-86280361 None:intergenic 20.0%
!! AGTAAAGTAAAAAATGAATG+GGG - Chr8:86279527-86279546 None:intergenic 20.0%
!! AGTAGCATATGTTATAATTT+AGG + Chr8:86279851-86279870 MsG0880047435.01.T01:intron 20.0%
!! ATTTAATAGATAGTGAATGA+GGG + Chr8:86279930-86279949 MsG0880047435.01.T01:intron 20.0%
!! TATGATATGGTTATGATAAT+TGG + Chr8:86280224-86280243 MsG0880047435.01.T01:three_prime_UTR 20.0%
!! TATTTAATAGATAGTGAATG+AGG + Chr8:86279929-86279948 MsG0880047435.01.T01:intron 20.0%
!! TTAAAAAACCAATCAATTTC+AGG + Chr8:86278012-86278031 MsG0880047435.01.T01:five_prime_UTR 20.0%
!! TTCCCTTAATTCATATAATT+CGG + Chr8:86277962-86277981 MsG0880047435.01.T01:five_prime_UTR 20.0%
!!! AAATTGTTGATTGATATTGT+GGG + Chr8:86279972-86279991 MsG0880047435.01.T01:intron 20.0%
!!! AAGTAAAAAGATATTTGTTG+TGG + Chr8:86279643-86279662 MsG0880047435.01.T01:intron 20.0%
!!! AATTAGGTAAATTTTGTCTT+GGG + Chr8:86279791-86279810 MsG0880047435.01.T01:intron 20.0%
!!! GGATTTATTATTGTTATTGT+TGG - Chr8:86278516-86278535 None:intergenic 20.0%
!!! GTTTTGTTTTAAAAAAGAGA+TGG - Chr8:86278096-86278115 None:intergenic 20.0%
!!! TTAAGATTTTGTCTTGAATT+AGG + Chr8:86279775-86279794 MsG0880047435.01.T01:intron 20.0%
! AATTAAGAATTGCATATGAG+TGG - Chr8:86278196-86278215 None:intergenic 25.0%
! ACTAGAAGAAATTAGAAAAG+AGG + Chr8:86280191-86280210 MsG0880047435.01.T01:three_prime_UTR 25.0%
! AGAAAATCAGATATCAAGTT+AGG + Chr8:86280110-86280129 MsG0880047435.01.T01:CDS 25.0%
! CAATAATAAATCCACCAAAT+TGG + Chr8:86278523-86278542 MsG0880047435.01.T01:five_prime_UTR 25.0%
! CATAAAGAAAACCTAAACAT+TGG - Chr8:86280385-86280404 None:intergenic 25.0%
! TATAAGAGTTATAAGTGAGA+TGG - Chr8:86277819-86277838 None:intergenic 25.0%
! TCCCGAATTATATGAATTAA+GGG - Chr8:86277967-86277986 None:intergenic 25.0%
! TCCCTTAATTCATATAATTC+GGG + Chr8:86277963-86277982 MsG0880047435.01.T01:five_prime_UTR 25.0%
! TGAATGTGTACTCAATAAAA+AGG + Chr8:86279617-86279636 MsG0880047435.01.T01:intron 25.0%
! TTCCCGAATTATATGAATTA+AGG - Chr8:86277968-86277987 None:intergenic 25.0%
! TTGTTGAAATTGAATTACGA+CGG + Chr8:86279107-86279126 MsG0880047435.01.T01:CDS 25.0%
! TTTCATACTCTTCAATTCAT+TGG + Chr8:86277840-86277859 MsG0880047435.01.T01:five_prime_UTR 25.0%
!! AGGAAATCTAGTTTATGATA+TGG + Chr8:86280211-86280230 MsG0880047435.01.T01:three_prime_UTR 25.0%
!! CAAATTGTTGATTGATATTG+TGG + Chr8:86279971-86279990 MsG0880047435.01.T01:intron 25.0%
!! GAATTAGGTAAATTTTGTCT+TGG + Chr8:86279790-86279809 MsG0880047435.01.T01:intron 25.0%
!! TCATCATCCTTTTTACTTTA+CGG + Chr8:86278603-86278622 MsG0880047435.01.T01:five_prime_UTR 25.0%
!! TTCTTTTACTTTCAGAGTAT+TGG + Chr8:86278575-86278594 MsG0880047435.01.T01:five_prime_UTR 25.0%
!!! ATCATAAGCTTTTTCCAATT+TGG - Chr8:86278540-86278559 None:intergenic 25.0%
!!! GTCACAAATAGATTTGTTAT+GGG + Chr8:86280009-86280028 MsG0880047435.01.T01:CDS 25.0%
!!! TGTCACAAATAGATTTGTTA+TGG + Chr8:86280008-86280027 MsG0880047435.01.T01:CDS 25.0%
!!! TTTCTTTTTAAAGATTACCC+AGG + Chr8:86279426-86279445 MsG0880047435.01.T01:intron 25.0%
AAATGAAGATAAAGCCAAAG+GGG - Chr8:86278071-86278090 None:intergenic 30.0%
AAATGTCGGAAAGGTAATTA+AGG - Chr8:86279276-86279295 None:intergenic 30.0%
AACAAGTACGAAAACAAAAC+AGG - Chr8:86279249-86279268 None:intergenic 30.0%
AATCAGATATCAAGTTAGGA+AGG + Chr8:86280114-86280133 MsG0880047435.01.T01:CDS 30.0%
AATTGACATATGAGGGATTA+AGG - Chr8:86279305-86279324 None:intergenic 30.0%
AATTGCATATGAGTGGAAAT+TGG - Chr8:86278189-86278208 None:intergenic 30.0%
ACAAAGAACCTGAAATTGAT+TGG - Chr8:86278023-86278042 None:intergenic 30.0%
ACAAATGAAGATAAAGCCAA+AGG - Chr8:86278073-86278092 None:intergenic 30.0%
ACATACATTAACATCGTTTC+CGG - Chr8:86279198-86279217 None:intergenic 30.0%
ATTGATCATACCTTCATTCT+TGG - Chr8:86280157-86280176 None:intergenic 30.0%
CAAATGAAGATAAAGCCAAA+GGG - Chr8:86278072-86278091 None:intergenic 30.0%
CTTAGTAATACAGATGAGAA+CGG - Chr8:86277596-86277615 None:intergenic 30.0%
GAATGCAGAATTGAAAGAAA+TGG + Chr8:86279058-86279077 MsG0880047435.01.T01:CDS 30.0%
GAGAGTAAAGAAAAGGAAAT+TGG - Chr8:86277913-86277932 None:intergenic 30.0%
GTTGTTCAATTGACATATGA+GGG - Chr8:86279312-86279331 None:intergenic 30.0%
TCATCTGTATTACTAAGGTA+AGG + Chr8:86277599-86277618 MsG0880047435.01.T01:five_prime_UTR 30.0%
TCTTGTGTAGTTTCAATAAC+CGG + Chr8:86279738-86279757 MsG0880047435.01.T01:intron 30.0%
TGTTGTTCAATTGACATATG+AGG - Chr8:86279313-86279332 None:intergenic 30.0%
TTGGCAAGTGAAATTCAAAA+AGG - Chr8:86278219-86278238 None:intergenic 30.0%
TTTGTCTTGGGTCAAATTAT+GGG + Chr8:86279803-86279822 MsG0880047435.01.T01:intron 30.0%
! ATCTGATTTTCTTAGAGATG+AGG - Chr8:86280102-86280121 None:intergenic 30.0%
! CTAAAACACGAAGACATTTT+TGG - Chr8:86278238-86278257 None:intergenic 30.0%
! TTTTGTCTTGGGTCAAATTA+TGG + Chr8:86279802-86279821 MsG0880047435.01.T01:intron 30.0%
!! AAAATGTCTTCGTGTTTTAG+TGG + Chr8:86278238-86278257 MsG0880047435.01.T01:five_prime_UTR 30.0%
!! AACAATCCACTTTTCAACTT+TGG - Chr8:86279089-86279108 None:intergenic 30.0%
!! ATAAGCTTTTTCCAATTTGG+TGG - Chr8:86278537-86278556 None:intergenic 30.0%
!! ATAGATTTGTTATGGGAGAA+TGG + Chr8:86280016-86280035 MsG0880047435.01.T01:CDS 30.0%
!! ATTCTAAAACTAAACCCCTT+TGG + Chr8:86278054-86278073 MsG0880047435.01.T01:five_prime_UTR 30.0%
!! GATTAAGGTACTGAAAATGT+CGG - Chr8:86279290-86279309 None:intergenic 30.0%
!! GATTTTAATCACGTGGAATA+TGG + Chr8:86279452-86279471 MsG0880047435.01.T01:intron 30.0%
!!! AACAGGTGTTGAATTTTGAT+TGG - Chr8:86279232-86279251 None:intergenic 30.0%
!!! ACAGGTGTTGAATTTTGATT+GGG - Chr8:86279231-86279250 None:intergenic 30.0%
!!! GCATCGTTCTTTTTTGTTTA+TGG + Chr8:86280254-86280273 MsG0880047435.01.T01:three_prime_UTR 30.0%
!!! TCTTTTTTGTTTATGGAGAG+TGG + Chr8:86280261-86280280 MsG0880047435.01.T01:three_prime_UTR 30.0%
!!! TTTGTTCCCTCTACTTTTTT+GGG + Chr8:86278116-86278135 MsG0880047435.01.T01:five_prime_UTR 30.0%
AATTGAATTACGACGGTGTT+CGG + Chr8:86279114-86279133 MsG0880047435.01.T01:CDS 35.0%
ACCAATTTCCTTCATCAACA+TGG - Chr8:86278917-86278936 None:intergenic 35.0%
AGAGGGAAGTTAAAAAGGAA+AGG - Chr8:86277755-86277774 None:intergenic 35.0%
ATATAGCCAAAACAAGCGTT+AGG - Chr8:86280438-86280457 None:intergenic 35.0%
ATGAATTAAGGGAAAAGCGA+GGG - Chr8:86277956-86277975 None:intergenic 35.0%
ATGGATAGATCCTCAAAAGT+TGG - Chr8:86280323-86280342 None:intergenic 35.0%
CCTAAACCCAAAAAAGTAGA+GGG - Chr8:86278125-86278144 None:intergenic 35.0%
CGTTCTCATCTGTATTACTA+AGG + Chr8:86277594-86277613 MsG0880047435.01.T01:five_prime_UTR 35.0%
CTTAACATGAACATACAGTC+CGG - Chr8:86279760-86279779 None:intergenic 35.0%
GAAAAAGAAGAAGGTTGTTG+CGG + Chr8:86279025-86279044 MsG0880047435.01.T01:CDS 35.0%
GATTCAGAGATTGTTGAAGA+AGG - Chr8:86278354-86278373 None:intergenic 35.0%
GGAGAAGAAGAAAAAGAAGA+AGG + Chr8:86279016-86279035 MsG0880047435.01.T01:CDS 35.0%
TATGAATTAAGGGAAAAGCG+AGG - Chr8:86277957-86277976 None:intergenic 35.0%
TTATAAGTGAGATGGAGACA+GGG - Chr8:86277811-86277830 None:intergenic 35.0%
! AGAAGGAATTGATAGCATCA+TGG + Chr8:86278776-86278795 MsG0880047435.01.T01:CDS 35.0%
! ATGTTGATGAAGGAAATTGG+TGG + Chr8:86278916-86278935 MsG0880047435.01.T01:CDS 35.0%
! ATTTTAAGCATATCAACCGC+CGG - Chr8:86278948-86278967 None:intergenic 35.0%
! GAAAGTACAGTGAAGAAAGA+GGG - Chr8:86277869-86277888 None:intergenic 35.0%
! GAAGGAATTGATAGCATCAT+GGG + Chr8:86278777-86278796 MsG0880047435.01.T01:CDS 35.0%
! GAGAGTGTGTAGATAGATAT+AGG - Chr8:86277724-86277743 None:intergenic 35.0%
!! CACTTTTTGTCCAACTTTTG+AGG + Chr8:86280310-86280329 MsG0880047435.01.T01:three_prime_UTR 35.0%
!! TGATGATGATGATTTTGACG+CGG + Chr8:86278728-86278747 MsG0880047435.01.T01:CDS 35.0%
!! TTTGATTGGGTCGTTTTCTT+GGG - Chr8:86278418-86278437 None:intergenic 35.0%
!!! CCTCTACTTTTTTGGGTTTA+GGG + Chr8:86278123-86278142 MsG0880047435.01.T01:five_prime_UTR 35.0%
!!! CTTTGTTCCCTCTACTTTTT+TGG + Chr8:86278115-86278134 MsG0880047435.01.T01:five_prime_UTR 35.0%
!!! GTTTGTTTTGAGATTGGGAT+TGG - Chr8:86278492-86278511 None:intergenic 35.0%
!!! TTGGGGTTTGTTTTGAGATT+GGG - Chr8:86278497-86278516 None:intergenic 35.0%
AAGTGGCGAGAGTAAAGAAA+AGG - Chr8:86277920-86277939 None:intergenic 40.0%
AATCATCACCACCATGTTCA+TGG + Chr8:86278301-86278320 MsG0880047435.01.T01:five_prime_UTR 40.0%
ACCATTGAACTAATCTCTCC+GGG - Chr8:86278678-86278697 None:intergenic 40.0%
ACGTGATTAAAATCTCGCCT+GGG - Chr8:86279446-86279465 None:intergenic 40.0%
AGCTTCGTTGTAGGTTTGAT+TGG - Chr8:86278432-86278451 None:intergenic 40.0%
AGGAAATTGGTGGAATTTCC+CGG + Chr8:86278926-86278945 MsG0880047435.01.T01:CDS 40.0%
AGTAACATACACTTGCAGAG+TGG - Chr8:86277633-86277652 None:intergenic 40.0%
AGTAATACAGATGAGAACGG+AGG - Chr8:86277593-86277612 None:intergenic 40.0%
ATTGGCGAAGAAATGAGGTT+AGG - Chr8:86278171-86278190 None:intergenic 40.0%
CACCATTGAACTAATCTCTC+CGG - Chr8:86278679-86278698 None:intergenic 40.0%
CCCTAAACCCAAAAAAGTAG+AGG - Chr8:86278126-86278145 None:intergenic 40.0%
CTAATCTAAATCCAACCCGA+TGG - Chr8:86278278-86278297 None:intergenic 40.0%
CTATCTACACACTCTCTCAA+CGG + Chr8:86277728-86277747 MsG0880047435.01.T01:five_prime_UTR 40.0%
GAATCGCCAAAGTTGAAAAG+TGG + Chr8:86279080-86279099 MsG0880047435.01.T01:CDS 40.0%
GCTTCGTTGTAGGTTTGATT+GGG - Chr8:86278431-86278450 None:intergenic 40.0%
GTTATAAGTGAGATGGAGAC+AGG - Chr8:86277812-86277831 None:intergenic 40.0%
TATAAGTGAGATGGAGACAG+GGG - Chr8:86277810-86277829 None:intergenic 40.0%
TCTTCTTCTCATCCATGGAT+TGG + Chr8:86278831-86278850 MsG0880047435.01.T01:CDS 40.0%
TGAATTAAGGGAAAAGCGAG+GGG - Chr8:86277955-86277974 None:intergenic 40.0%
TGATTGATATTGTGGGAGAC+AGG + Chr8:86279979-86279998 MsG0880047435.01.T01:intron 40.0%
TGGAAATTGGCGAAGAAATG+AGG - Chr8:86278176-86278195 None:intergenic 40.0%
TTTGTGGTGTAGATTGCAAG+CGG - Chr8:86278387-86278406 None:intergenic 40.0%
! AACAAGCCTAACGCTTGTTT+TGG + Chr8:86280429-86280448 MsG0880047435.01.T01:three_prime_UTR 40.0%
! GCCATGTTGATGAAGGAAAT+TGG + Chr8:86278913-86278932 MsG0880047435.01.T01:CDS 40.0%
! GGAAAGTACAGTGAAGAAAG+AGG - Chr8:86277870-86277889 None:intergenic 40.0%
! TTTTAAGCATATCAACCGCC+GGG - Chr8:86278947-86278966 None:intergenic 40.0%
! TTTTTCTTCTTCTCCGTCAC+CGG - Chr8:86279011-86279030 None:intergenic 40.0%
!! AGGTACTGAAAATGTCGGAA+AGG - Chr8:86279285-86279304 None:intergenic 40.0%
!! GATTTGTTATGGGAGAATGG+AGG + Chr8:86280019-86280038 MsG0880047435.01.T01:CDS 40.0%
!! GTTTGATTGGGTCGTTTTCT+TGG - Chr8:86278419-86278438 None:intergenic 40.0%
!! TTACTCTCTCTCTCTAGAGT+CGG + Chr8:86277648-86277667 MsG0880047435.01.T01:five_prime_UTR 40.0%
!! TTGATTGGGTCGTTTTCTTG+GGG - Chr8:86278417-86278436 None:intergenic 40.0%
!!! CCCTCTACTTTTTTGGGTTT+AGG + Chr8:86278122-86278141 MsG0880047435.01.T01:five_prime_UTR 40.0%
!!! GTTGGGGTTTGTTTTGAGAT+TGG - Chr8:86278498-86278517 None:intergenic 40.0%
!!! TCTCATCCATGGATTGGTTT+TGG + Chr8:86278837-86278856 MsG0880047435.01.T01:CDS 40.0%
!!! TCTTCGTGTTTTAGTGGAAC+AGG + Chr8:86278244-86278263 MsG0880047435.01.T01:five_prime_UTR 40.0%
AAAGAAGAAGGTTGTTGCGG+TGG + Chr8:86279028-86279047 MsG0880047435.01.T01:CDS 45.0%
AAATTGGTGGAATTTCCCGG+CGG + Chr8:86278929-86278948 MsG0880047435.01.T01:CDS 45.0%
AACATACACTTGCAGAGTGG+AGG - Chr8:86277630-86277649 None:intergenic 45.0%
ACCAACGCAACAACCACAAA+GGG - Chr8:86280290-86280309 None:intergenic 45.0%
ACGGGAGAGGGAAGTTAAAA+AGG - Chr8:86277760-86277779 None:intergenic 45.0%
ACGTCTCTTCTTCTCATCCA+TGG + Chr8:86278826-86278845 MsG0880047435.01.T01:CDS 45.0%
ACTTTCCTTTCTCCTCTCCT+CGG + Chr8:86277883-86277902 MsG0880047435.01.T01:five_prime_UTR 45.0%
AGTACAGTGAAGAAAGAGGG+TGG - Chr8:86277866-86277885 None:intergenic 45.0%
AGTTCTTTCTTGCCCGTTGT+GGG - Chr8:86277556-86277575 None:intergenic 45.0%
ATAAGTGAGATGGAGACAGG+GGG - Chr8:86277809-86277828 None:intergenic 45.0%
CACCTCTCTGTAATCCTAAC+CGG - Chr8:86278878-86278897 None:intergenic 45.0%
CACGTGATTAAAATCTCGCC+TGG - Chr8:86279447-86279466 None:intergenic 45.0%
CATCATGGGAGGTAGAATTG+AGG + Chr8:86278791-86278810 MsG0880047435.01.T01:CDS 45.0%
CTCGACGAGGAAATTGAAGA+AGG + Chr8:86278759-86278778 MsG0880047435.01.T01:CDS 45.0%
GATGTTCGACTCCATGAACA+TGG - Chr8:86278315-86278334 None:intergenic 45.0%
GGGCTTGCCGTAAAGTAAAA+AGG - Chr8:86278613-86278632 None:intergenic 45.0%
GGTTTGGGTATGCAGTGTTA+AGG - Chr8:86278463-86278482 None:intergenic 45.0%
TCGCCCAAAATATGCAGTGT+CGG + Chr8:86278969-86278988 MsG0880047435.01.T01:CDS 45.0%
TGAGATTGGGATTGGAGAAG+AGG - Chr8:86278484-86278503 None:intergenic 45.0%
TGCAGTCTGCACCAATGTTT+AGG + Chr8:86280371-86280390 MsG0880047435.01.T01:three_prime_UTR 45.0%
TGGGATTGGAGAAGAGGTTT+GGG - Chr8:86278478-86278497 None:intergenic 45.0%
TTCCGGTTAGGATTACAGAG+AGG + Chr8:86278873-86278892 MsG0880047435.01.T01:CDS 45.0%
TTGGGATTGGAGAAGAGGTT+TGG - Chr8:86278479-86278498 None:intergenic 45.0%
TTGTTATGGGAGAATGGAGG+AGG + Chr8:86280022-86280041 MsG0880047435.01.T01:CDS 45.0%
! AAAAGGAAATTGGTGTCCCG+AGG - Chr8:86277903-86277922 None:intergenic 45.0%
! AACATCGTTTCCGGAAGCAT+CGG - Chr8:86279189-86279208 None:intergenic 45.0%
! ACCACCGACACTGCATATTT+TGG - Chr8:86278976-86278995 None:intergenic 45.0%
! CCACCGACACTGCATATTTT+GGG - Chr8:86278975-86278994 None:intergenic 45.0%
! GGAATTGATAGCATCATGGG+AGG + Chr8:86278780-86278799 MsG0880047435.01.T01:CDS 45.0%
! TCCCGGAGAGATTAGTTCAA+TGG + Chr8:86278674-86278693 MsG0880047435.01.T01:exon 45.0%
!! CAGGCGAGATTTTAATCACG+TGG + Chr8:86279445-86279464 MsG0880047435.01.T01:intron 45.0%
!!! ATCCATGGATTGGTTTTGGC+GGG + Chr8:86278841-86278860 MsG0880047435.01.T01:CDS 45.0%
!!! CATCCATGGATTGGTTTTGG+CGG + Chr8:86278840-86278859 MsG0880047435.01.T01:CDS 45.0%
!!! TCGTGTTTTAGTGGAACAGG+AGG + Chr8:86278247-86278266 MsG0880047435.01.T01:five_prime_UTR 45.0%
!!! TGACATGGTTTCACCGGTTT+TGG - Chr8:86278651-86278670 None:intergenic 45.0%
!!! TTCTTGGGGTTCTGGTTTTG+TGG - Chr8:86278403-86278422 None:intergenic 45.0%
!!! TTTTGGCTCCGACTGGAAAT+CGG - Chr8:86278634-86278653 None:intergenic 45.0%
AGATCGACGGCCAAGAATGA+AGG + Chr8:86280144-86280163 MsG0880047435.01.T01:CDS 50.0%
CAACGCAACAACCACAAAGG+GGG - Chr8:86280288-86280307 None:intergenic 50.0%
CAGTTCTTTCTTGCCCGTTG+TGG - Chr8:86277557-86277576 None:intergenic 50.0%
CCAACGCAACAACCACAAAG+GGG - Chr8:86280289-86280308 None:intergenic 50.0%
CGGTTAGGATTACAGAGAGG+TGG + Chr8:86278876-86278895 MsG0880047435.01.T01:CDS 50.0%
CTTTCCTTTCTCCTCTCCTC+GGG + Chr8:86277884-86277903 MsG0880047435.01.T01:five_prime_UTR 50.0%
GAACAGGAGGAAGAACCATC+GGG + Chr8:86278260-86278279 MsG0880047435.01.T01:five_prime_UTR 50.0%
GACCAACGCAACAACCACAA+AGG - Chr8:86280291-86280310 None:intergenic 50.0%
GATATTGTGGGAGACAGGCA+CGG + Chr8:86279984-86280003 MsG0880047435.01.T01:intron 50.0%
GGAACAGGAGGAAGAACCAT+CGG + Chr8:86278259-86278278 MsG0880047435.01.T01:five_prime_UTR 50.0%
GGAAGGTCAATGCAGATCGA+CGG + Chr8:86280131-86280150 MsG0880047435.01.T01:CDS 50.0%
GGACTCTGACATGGTTTCAC+CGG - Chr8:86278657-86278676 None:intergenic 50.0%
GGGAAATTCGACTTCCGGTT+AGG + Chr8:86278861-86278880 MsG0880047435.01.T01:CDS 50.0%
GTGAAACCATGTCAGAGTCC+CGG + Chr8:86278657-86278676 MsG0880047435.01.T01:five_prime_UTR 50.0%
GTTCGACTCCATGAACATGG+TGG - Chr8:86278312-86278331 None:intergenic 50.0%
TTCCCGCCAAAACCAATCCA+TGG - Chr8:86278846-86278865 None:intergenic 50.0%
TTCTTTGTAACGCAGCACGC+TGG - Chr8:86280065-86280084 None:intergenic 50.0%
TTGGCGGGAAATTCGACTTC+CGG + Chr8:86278856-86278875 MsG0880047435.01.T01:CDS 50.0%
TTTCCAGTCGGAGCCAAAAC+CGG + Chr8:86278635-86278654 MsG0880047435.01.T01:five_prime_UTR 50.0%
! CCCAAAATATGCAGTGTCGG+TGG + Chr8:86278972-86278991 MsG0880047435.01.T01:CDS 50.0%
! GAATGGTAGTGTCCCACAAC+GGG + Chr8:86277541-86277560 MsG0880047435.01.T01:five_prime_UTR 50.0%
! GAGTGTTGCAGCTTCGTTGT+AGG - Chr8:86278441-86278460 None:intergenic 50.0%
! GCTCTTCGCCATGTTGATGA+AGG + Chr8:86278906-86278925 MsG0880047435.01.T01:CDS 50.0%
! TTTGGCTCCGACTGGAAATC+GGG - Chr8:86278633-86278652 None:intergenic 50.0%
!! ATGCAGTGTCGGTGGTAAGA+CGG + Chr8:86278980-86278999 MsG0880047435.01.T01:CDS 50.0%
ACGACGGTGTTCGGAAAGCT+TGG + Chr8:86279123-86279142 MsG0880047435.01.T01:CDS 55.0%
AGGAGAGAGAGGAAGAGAGG+GGG - Chr8:86277786-86277805 None:intergenic 55.0%
AGGAGGAAGAACCATCGGGT+TGG + Chr8:86278264-86278283 MsG0880047435.01.T01:five_prime_UTR 55.0%
ATCGGAGACAGGGCTGTCAT+CGG - Chr8:86279171-86279190 None:intergenic 55.0%
ATCTCTCCGGGACTCTGACA+TGG - Chr8:86278666-86278685 None:intergenic 55.0%
CCCCTTTGTGGTTGTTGCGT+TGG + Chr8:86280286-86280305 MsG0880047435.01.T01:three_prime_UTR 55.0%
CGCGGAATCAATACTCGACG+AGG + Chr8:86278746-86278765 MsG0880047435.01.T01:CDS 55.0%
GAGGAGAGAGAGGAAGAGAG+GGG - Chr8:86277787-86277806 None:intergenic 55.0%
GGAGGAGAGAGAGGAAGAGA+GGG - Chr8:86277788-86277807 None:intergenic 55.0%
TAAGGGAAAAGCGAGGGGCA+GGG - Chr8:86277950-86277969 None:intergenic 55.0%
TGGGAGAATGGAGGAGGAAG+TGG + Chr8:86280028-86280047 MsG0880047435.01.T01:CDS 55.0%
TTAAGGGAAAAGCGAGGGGC+AGG - Chr8:86277951-86277970 None:intergenic 55.0%
! GAAATTGGTGTCCCGAGGAG+AGG - Chr8:86277898-86277917 None:intergenic 55.0%
!! CTCTCTCTCTCTAGAGTCGG+TGG + Chr8:86277651-86277670 MsG0880047435.01.T01:five_prime_UTR 55.0%
!! GGGTCGTTTTCTTGGGGTTC+TGG - Chr8:86278411-86278430 None:intergenic 55.0%
!! TTCCGGAAGCATCGGAGACA+GGG - Chr8:86279181-86279200 None:intergenic 55.0%
!! TTTCCGGAAGCATCGGAGAC+AGG - Chr8:86279182-86279201 None:intergenic 55.0%
ACAGGGCTGTCATCGGCGAA+CGG - Chr8:86279164-86279183 None:intergenic 60.0%
AGAGGAAGAGAGGGGGGTCA+CGG - Chr8:86277779-86277798 None:intergenic 60.0%
AGCCCTGTCTCCGATGCTTC+CGG + Chr8:86279176-86279195 MsG0880047435.01.T01:CDS 60.0%
AGTGAGATGGAGACAGGGGG+AGG - Chr8:86277806-86277825 None:intergenic 60.0%
CGGAAAGCTTGGTCTGACCG+AGG + Chr8:86279134-86279153 MsG0880047435.01.T01:CDS 60.0%
CGGCAAGCCCGATTTCCAGT+CGG + Chr8:86278623-86278642 MsG0880047435.01.T01:five_prime_UTR 60.0%
GGAGAGAGAGGAAGAGAGGG+GGG - Chr8:86277785-86277804 None:intergenic 60.0%
GGGAGGAGAGAGAGGAAGAG+AGG - Chr8:86277789-86277808 None:intergenic 60.0%
GTGTCCCGAGGAGAGGAGAA+AGG - Chr8:86277891-86277910 None:intergenic 60.0%
TGGAGAGTGGACCCCCTTTG+TGG + Chr8:86280274-86280293 MsG0880047435.01.T01:three_prime_UTR 60.0%
!! AGGGGCAGGGCATTGCAAAG+TGG - Chr8:86277937-86277956 None:intergenic 60.0%
!! CAGTGTCGGTGGTAAGACGG+CGG + Chr8:86278983-86279002 MsG0880047435.01.T01:CDS 60.0%
!!! TCACCGGTTTTGGCTCCGAC+TGG - Chr8:86278641-86278660 None:intergenic 60.0%
CATCGGCGAACGGCGTTCCT+CGG - Chr8:86279154-86279173 None:intergenic 65.0%
GAGACAGGGGGAGGAGAGAG+AGG - Chr8:86277797-86277816 None:intergenic 65.0%
GAGGAAGAGAGGGGGGTCAC+GGG - Chr8:86277778-86277797 None:intergenic 65.0%
AGAGAGGGGGGTCACGGGAG+AGG - Chr8:86277773-86277792 None:intergenic 70.0%
GAGAGGGGGGTCACGGGAGA+GGG - Chr8:86277772-86277791 None:intergenic 70.0%
!! TAAGACGGCGGCGCCGGTGA+CGG + Chr8:86278995-86279014 MsG0880047435.01.T01:CDS 70.0%
CGGTGGTAAGACGGCGGCGC+CGG + Chr8:86278989-86279008 MsG0880047435.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 86277541 86280531 86277541 ID=MsG0880047435.01;Name=MsG0880047435.01
Chr8 mRNA 86277541 86280531 86277541 ID=MsG0880047435.01.T01;Parent=MsG0880047435.01;Name=MsG0880047435.01.T01;_AED=0.32;_eAED=0.32;_QI=1152|1|1|1|0|1|2|360|229
Chr8 exon 86277541 86279211 86277541 ID=MsG0880047435.01.T01:exon:17804;Parent=MsG0880047435.01.T01
Chr8 exon 86280001 86280531 86280001 ID=MsG0880047435.01.T01:exon:17805;Parent=MsG0880047435.01.T01
Chr8 five_prime_UTR 86277541 86278692 86277541 ID=MsG0880047435.01.T01:five_prime_utr;Parent=MsG0880047435.01.T01
Chr8 CDS 86278693 86279211 86278693 ID=MsG0880047435.01.T01:cds;Parent=MsG0880047435.01.T01
Chr8 CDS 86280001 86280171 86280001 ID=MsG0880047435.01.T01:cds;Parent=MsG0880047435.01.T01
Chr8 three_prime_UTR 86280172 86280531 86280172 ID=MsG0880047435.01.T01:three_prime_utr;Parent=MsG0880047435.01.T01
Gene Sequence

>MsG0880047435.01.T01

ATGGTGAATTGTCTTGAATTGAACGACGATGATGATGATGATGATGATTTTGACGCGGAATCAATACTCGACGAGGAAATTGAAGAAGGAATTGATAGCATCATGGGAGGTAGAATTGAGGAGAATGAATCTAACGTCTCTTCTTCTCATCCATGGATTGGTTTTGGCGGGAAATTCGACTTCCGGTTAGGATTACAGAGAGGTGGAGTGAGAGCTCTTCGCCATGTTGATGAAGGAAATTGGTGGAATTTCCCGGCGGTTGATATGCTTAAAATTTCGCCCAAAATATGCAGTGTCGGTGGTAAGACGGCGGCGCCGGTGACGGAGAAGAAGAAAAAGAAGAAGGTTGTTGCGGTGGAGAGACTGAATGCAGAATTGAAAGAAATGGAATCGCCAAAGTTGAAAAGTGGATTGTTGTTGAAATTGAATTACGACGGTGTTCGGAAAGCTTGGTCTGACCGAGGAACGCCGTTCGCCGATGACAGCCCTGTCTCCGATGCTTCCGGAAACGATGTTAATGCACGGTTGTCACAAATAGATTTGTTATGGGAGAATGGAGGAGGAAGTGGTGTAAGAGAAGCCAGCGTGCTGCGTTACAAAGAAAAGCGTCGTACACGCCTCATCTCTAAGAAAATCAGATATCAAGTTAGGAAGGTCAATGCAGATCGACGGCCAAGAATGAAGGTATGA

Protein sequence

>MsG0880047435.01.T01

MVNCLELNDDDDDDDDFDAESILDEEIEEGIDSIMGGRIEENESNVSSSHPWIGFGGKFDFRLGLQRGGVRALRHVDEGNWWNFPAVDMLKISPKICSVGGKTAAPVTEKKKKKKVVAVERLNAELKEMESPKLKSGLLLKLNYDGVRKAWSDRGTPFADDSPVSDASGNDVNARLSQIDLLWENGGGSGVREASVLRYKEKRRTRLISKKIRYQVRKVNADRRPRMKV*