AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040518.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040518.01.T01 MTR_7g091990 93.981 216 13 0 1 216 1 216 6.24e-121 346
MsG0780040518.01.T01 MTR_1g052560 55.022 229 71 8 1 216 1 210 5.52e-60 191
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040518.01.T01 AT2G41870 47.489 219 81 7 9 216 13 208 4.02e-48 160
MsG0780040518.01.T01 AT3G57540 43.243 222 112 7 5 216 13 230 5.63e-40 140

Find 267 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTATTTGTTCATCTTCT+TGG 0.075826 7:+78643529 None:intergenic
TTAAAAGTTAAATTCTAATT+AGG 0.116311 7:+78638263 None:intergenic
TATGAGAAAATATATATTTA+TGG 0.130951 7:-78640699 MsG0780040518.01.T01:three_prime_UTR
AACCCCTTGGGAAGAAATTT+AGG 0.161955 7:-78640250 MsG0780040518.01.T01:three_prime_UTR
TTGAAGGAATAGTTAATTTA+AGG 0.166499 7:+78641855 None:intergenic
AGACCTGATGAAGTATATTT+TGG 0.178076 7:-78640551 MsG0780040518.01.T01:three_prime_UTR
CACTCTTTAACTAATTAAAA+AGG 0.214979 7:+78636844 None:intergenic
GATCAATGATTATGTTATTT+TGG 0.223624 7:-78641170 MsG0780040518.01.T01:three_prime_UTR
GAGTCAATCACATGCTAATT+TGG 0.238122 7:-78641385 MsG0780040518.01.T01:three_prime_UTR
ATGATTACCATAAGCCCTTA+TGG 0.240368 7:-78640017 MsG0780040518.01.T01:three_prime_UTR
ATGCATGCCAAAATAAAATT+TGG 0.245820 7:-78641407 MsG0780040518.01.T01:three_prime_UTR
TGTAGTTTGTAATGGCTAAT+TGG 0.252985 7:+78638306 None:intergenic
TTTGGGTATTGTTATGTCTA+AGG 0.255050 7:-78642028 MsG0780040518.01.T01:CDS
AAAACTGTGGCAATATTAAT+AGG 0.255261 7:+78641075 None:intergenic
CCACCACGTAATGAGGTTAT+TGG 0.256877 7:+78637405 None:intergenic
GATTTACATCATAGAGAAAA+TGG 0.260514 7:+78641447 None:intergenic
TAACTAACACATCTATAAAA+TGG 0.266269 7:-78637873 MsG0780040518.01.T01:three_prime_UTR
TCACGCCTCATGTTATATAA+TGG 0.268847 7:-78639059 MsG0780040518.01.T01:three_prime_UTR
TGTAGCATTGAAAATTTAAT+TGG 0.269662 7:-78641194 MsG0780040518.01.T01:three_prime_UTR
ACTGATGTATTGAAACTAAA+AGG 0.279796 7:+78639304 None:intergenic
TTGACTTGGTCTAATTCTTT+AGG 0.279827 7:-78639540 MsG0780040518.01.T01:three_prime_UTR
TATATTAATACTAAGATAAA+AGG 0.281746 7:-78638595 MsG0780040518.01.T01:three_prime_UTR
CAAATACAACAGAGTTATAA+AGG 0.282772 7:+78638435 None:intergenic
CTAGTTATCATATTGATATA+TGG 0.288235 7:-78641000 MsG0780040518.01.T01:three_prime_UTR
TAAAAGTTAAATTCTAATTA+GGG 0.291783 7:+78638264 None:intergenic
ACCCCTTGGGAAGAAATTTA+GGG 0.305224 7:-78640249 MsG0780040518.01.T01:three_prime_UTR
TCATGAGGACTTATGTTGTT+AGG 0.306493 7:+78643327 None:intergenic
TATGGTGTGGTCATATATTA+TGG 0.307768 7:-78640982 MsG0780040518.01.T01:three_prime_UTR
ATGAGAAAATATATATTTAT+GGG 0.309508 7:-78640698 MsG0780040518.01.T01:three_prime_UTR
ACTTATAGATTTATTCTCAT+TGG 0.317245 7:+78640439 None:intergenic
ATCAGTCTAATATACAATCT+TGG 0.336278 7:-78639218 MsG0780040518.01.T01:three_prime_UTR
GCTAAATAATATAAAATTGA+TGG 0.342342 7:-78640060 MsG0780040518.01.T01:three_prime_UTR
TGCTGATGCTTTCCTCTCTT+CGG 0.348171 7:+78637026 None:intergenic
CCTCTGATGTGATTTATATC+AGG 0.351009 7:-78639152 MsG0780040518.01.T01:three_prime_UTR
TTGCCTAGCTTGAGTTACTA+TGG 0.356323 7:-78638671 MsG0780040518.01.T01:three_prime_UTR
GAATTGTGTAGGAGAGGTTT+GGG 0.359593 7:-78638237 MsG0780040518.01.T01:three_prime_UTR
TTTCCTATAGTGTATGATAA+TGG 0.364364 7:-78640092 MsG0780040518.01.T01:three_prime_UTR
TGGTTGTTGAGGAACCTAAC+TGG 0.375552 7:-78638554 MsG0780040518.01.T01:three_prime_UTR
TTTCCAAAATATACTTCATC+AGG 0.380857 7:+78640548 None:intergenic
AATTTCACAAGTTGGCTTAG+TGG 0.381560 7:+78640378 None:intergenic
ATCCTTTGTCAAGTATTGAT+TGG 0.381569 7:+78638731 None:intergenic
CCGGCCCCTACACCCCAGTT+AGG 0.383642 7:+78638540 None:intergenic
TGATTACCATAAGCCCTTAT+GGG 0.385314 7:-78640016 MsG0780040518.01.T01:three_prime_UTR
TTTGTTGGTGGTGGAGGAGG+TGG 0.385999 7:+78643468 None:intergenic
ATGCTGTGGTAATAATTAGT+AGG 0.388778 7:-78638793 MsG0780040518.01.T01:three_prime_UTR
TATAGACTTGATGAAATAAG+AGG 0.388980 7:-78640330 MsG0780040518.01.T01:three_prime_UTR
ACACCACCCATAAGGGCTTA+TGG 0.388981 7:+78640010 None:intergenic
TAATAGGCCGTGCGCATGCC+TGG 0.391217 7:+78639891 None:intergenic
CCTAACTGGGGTGTAGGGGC+CGG 0.393853 7:-78638540 MsG0780040518.01.T01:three_prime_UTR
TGATTTAGACGTTAAACCTT+TGG 0.395798 7:+78638375 None:intergenic
CGGTTTGTTGGTGGTGGAGG+AGG 0.395935 7:+78643465 None:intergenic
AGACTTAACACACAGTGAAT+TGG 0.396236 7:+78639772 None:intergenic
TACCCATTGAACCTTCTTCA+TGG 0.396343 7:+78640163 None:intergenic
TCAGTTCTAACTGATTAATC+AGG 0.397208 7:+78641549 None:intergenic
AATTAACTATTCCTTCAAAC+AGG 0.403563 7:-78641850 MsG0780040518.01.T01:three_prime_UTR
ATTATTTCATTGAATAATGA+AGG 0.404500 7:+78638472 None:intergenic
TGGATATGTTAGATTATTAA+CGG 0.404527 7:-78637587 MsG0780040518.01.T01:three_prime_UTR
CTACTTACTAGCTAGTTTCC+CGG 0.406158 7:+78638521 None:intergenic
CATGAGGACTTATGTTGTTA+GGG 0.407701 7:+78643328 None:intergenic
TTATATAATGGATTACTGTT+TGG 0.408737 7:-78639047 MsG0780040518.01.T01:three_prime_UTR
CAAGTCTATAATAATAAACT+TGG 0.409424 7:+78640343 None:intergenic
TTACGCGGTTGTGCGCTAAT+AGG 0.409981 7:+78639875 None:intergenic
GGAATTGTGTAGGAGAGGTT+TGG 0.410296 7:-78638238 MsG0780040518.01.T01:three_prime_UTR
CCACGGTTTGTTGGTGGTGG+AGG 0.413319 7:+78643462 None:intergenic
GTCAATATTTGTGAATTTAG+CGG 0.413529 7:-78640285 MsG0780040518.01.T01:three_prime_UTR
GGGAACCCAACCTTTGTGAT+TGG 0.413856 7:-78640191 MsG0780040518.01.T01:three_prime_UTR
TCACTTATAAACACTCCAAT+TGG 0.419385 7:+78636735 None:intergenic
GTATTTCATGTTTCCTTACT+CGG 0.419632 7:-78637936 MsG0780040518.01.T01:three_prime_UTR
TGACAAAGTCACTGTCCTTA+AGG 0.420902 7:+78639079 None:intergenic
TCAGTCTAATATACAATCTT+GGG 0.421741 7:-78639217 MsG0780040518.01.T01:three_prime_UTR
TTTACAAATTGACTTTGATC+TGG 0.422074 7:-78640908 MsG0780040518.01.T01:three_prime_UTR
AATAATCAAGGGAGATTTCA+AGG 0.423938 7:+78638938 None:intergenic
TGGTTGTAGCATACGCTAGA+TGG 0.425653 7:-78639986 MsG0780040518.01.T01:three_prime_UTR
AATTTCATTGTAGTTTGTAA+TGG 0.426290 7:+78638298 None:intergenic
CACACTAAAATTTCACAAGT+TGG 0.428898 7:+78640370 None:intergenic
TTGCATACAACAAGTGTCTT+GGG 0.432292 7:-78639812 MsG0780040518.01.T01:three_prime_UTR
CATCCATTATCATACACTAT+AGG 0.433712 7:+78640089 None:intergenic
ATTGGCTATGTTTCCCGTGT+TGG 0.435662 7:+78638324 None:intergenic
CACTCGAAAACGACAAGTAA+TGG 0.438607 7:-78640212 MsG0780040518.01.T01:three_prime_UTR
CTATGGCCGCCACGGTTTGT+TGG 0.439215 7:+78643453 None:intergenic
CGCGTAACAGCAAGAATTGT+GGG 0.439305 7:-78639859 MsG0780040518.01.T01:three_prime_UTR
ACTCGAAAACGACAAGTAAT+GGG 0.441406 7:-78640211 MsG0780040518.01.T01:three_prime_UTR
AGGAACCTAACTGGGGTGTA+GGG 0.443501 7:-78638545 MsG0780040518.01.T01:three_prime_UTR
CTAACTGGGGTGTAGGGGCC+GGG 0.443599 7:-78638539 MsG0780040518.01.T01:three_prime_UTR
TGGCAGGTTATCTCCTTCCA+TGG 0.443773 7:-78639027 MsG0780040518.01.T01:three_prime_UTR
CCGCCACGGTTTGTTGGTGG+TGG 0.444525 7:+78643459 None:intergenic
CATATATTATATACAATCAA+TGG 0.445451 7:+78637965 None:intergenic
CGATGATCATCAATGGACTA+TGG 0.448327 7:-78641885 MsG0780040518.01.T01:three_prime_UTR
ATCAACCGCTAGGCCGAGTA+AGG 0.448965 7:+78637923 None:intergenic
GGGAAGAACATGTTGTATCC+TGG 0.454090 7:-78639131 MsG0780040518.01.T01:three_prime_UTR
TATACTTAATGAAAACCAAT+TGG 0.455251 7:-78636750 MsG0780040518.01.T01:three_prime_UTR
CTCATTCTCTAACACGCTGC+AGG 0.457495 7:-78638070 MsG0780040518.01.T01:three_prime_UTR
TTCAATGCTCTTGTTCTAGC+AGG 0.458326 7:-78643363 MsG0780040518.01.T01:CDS
CAATGGATGGGAGAGTGAAC+AGG 0.460888 7:-78642989 MsG0780040518.01.T01:CDS
AAACAAAGAATATGAAGAAA+AGG 0.466466 7:+78641825 None:intergenic
ATTTCAAAAGTTATAACAAA+AGG 0.467921 7:+78639664 None:intergenic
GGAGACGGAACAGGATCAAA+AGG 0.469993 7:+78643189 None:intergenic
ATAATGGATTACTGTTTGGC+AGG 0.472568 7:-78639043 MsG0780040518.01.T01:three_prime_UTR
ACAACAGACTCCTATAGCTT+TGG 0.473058 7:-78637372 MsG0780040518.01.T01:three_prime_UTR
CTTGCATACAACAAGTGTCT+TGG 0.473259 7:-78639813 MsG0780040518.01.T01:three_prime_UTR
ATGACATATGTTAGTGTTGA+GGG 0.473567 7:+78637786 None:intergenic
TCATCAATGGACTATGGTAT+TGG 0.473673 7:-78641879 MsG0780040518.01.T01:three_prime_UTR
ATAATGCAGGCCAAAGCTAT+AGG 0.473764 7:+78637362 None:intergenic
AGGTTCAGAAAGCTACTTCA+TGG 0.476454 7:-78642969 MsG0780040518.01.T01:CDS
CTCTAACAATCTGCGCGTCC+TGG 0.476867 7:-78637896 MsG0780040518.01.T01:three_prime_UTR
TCCCATGAAGAAGGTTCAAT+GGG 0.478344 7:-78640165 MsG0780040518.01.T01:three_prime_UTR
AACAAACCCTTTGGCGATTG+TGG 0.479682 7:-78643223 MsG0780040518.01.T01:CDS
TTTCCAATGCAATGCAAAAG+AGG 0.481092 7:+78637442 None:intergenic
GTCGGTGGATAGAGTGAAGA+AGG 0.481158 7:-78643097 MsG0780040518.01.T01:CDS
CTTTGTATTAAAATAATACA+AGG 0.481695 7:-78640481 MsG0780040518.01.T01:three_prime_UTR
GAGTTATATTTACTCAATGT+GGG 0.482040 7:-78640601 MsG0780040518.01.T01:three_prime_UTR
GGATCTCCAATCACAAAGGT+TGG 0.482878 7:+78640185 None:intergenic
ACCCATTGAACCTTCTTCAT+GGG 0.483198 7:+78640164 None:intergenic
TCTTATACAATTGAATTGAC+AGG 0.483802 7:-78640809 MsG0780040518.01.T01:three_prime_UTR
TTCCCTAAATTTCTTCCCAA+GGG 0.484325 7:+78640247 None:intergenic
CAACCATACACCACCCATAA+GGG 0.484608 7:+78640003 None:intergenic
GAGATGACGAACGGTGGCTA+TGG 0.485036 7:+78643436 None:intergenic
TTGTTAAACAAAATGCTAGA+TGG 0.489431 7:+78637271 None:intergenic
GAGGAACCTAACTGGGGTGT+AGG 0.492162 7:-78638546 MsG0780040518.01.T01:three_prime_UTR
GTGAAATAAATAAATGATTG+TGG 0.496279 7:+78637486 None:intergenic
AGAGAAAAGAGCAAGAGCCT+TGG 0.496303 7:-78637088 MsG0780040518.01.T01:three_prime_UTR
TGAATTGGTTTAGCAAGCTA+TGG 0.496911 7:+78639787 None:intergenic
CTTGTTGCGATGATCATCAA+TGG 0.498700 7:-78641892 MsG0780040518.01.T01:three_prime_UTR
GATGGAAGAAACAAACCCTT+TGG 0.499116 7:-78643232 MsG0780040518.01.T01:CDS
CGCTTGCATGAGACCGTGGC+GGG 0.499465 7:-78639935 MsG0780040518.01.T01:three_prime_UTR
ATCCCATGAAGAAGGTTCAA+TGG 0.501369 7:-78640166 MsG0780040518.01.T01:three_prime_UTR
GGTGGAGGAGGTGGAAGTCG+AGG 0.504511 7:+78643477 None:intergenic
AAGAAAAGGAACCTGTTTGA+AGG 0.505364 7:+78641839 None:intergenic
CTGCTAGTAGGAGACGGAAC+AGG 0.505373 7:+78643180 None:intergenic
TGGGAGGATATGCGCTTATG+AGG 0.505380 7:-78639111 MsG0780040518.01.T01:three_prime_UTR
AGAGTTATATTTACTCAATG+TGG 0.507914 7:-78640602 MsG0780040518.01.T01:three_prime_UTR
GCCCCACTTGACACTCATAT+AGG 0.508387 7:+78639958 None:intergenic
GGAAGAACATGTTGTATCCT+GGG 0.509627 7:-78639130 MsG0780040518.01.T01:three_prime_UTR
GCTAATCTTATGAGAGCAGT+TGG 0.511217 7:-78636961 MsG0780040518.01.T01:three_prime_UTR
ATTAGTTAAAGAGTGCAAGA+TGG 0.512460 7:-78636836 MsG0780040518.01.T01:three_prime_UTR
TAGAGAAGAGGATCATATGA+TGG 0.513673 7:-78643250 MsG0780040518.01.T01:CDS
AAGTTGCTAAAATTAACAAC+AGG 0.513840 7:-78643035 MsG0780040518.01.T01:CDS
CTAGAGCACTCATGAATACC+AGG 0.516503 7:-78639909 MsG0780040518.01.T01:three_prime_UTR
ACAATAACAATAACAATTTG+AGG 0.516591 7:-78643278 MsG0780040518.01.T01:CDS
ACAACCATACACCACCCATA+AGG 0.517284 7:+78640002 None:intergenic
ATGAGGCGGATAAATCCTTA+AGG 0.518492 7:-78639094 MsG0780040518.01.T01:three_prime_UTR
TTTCCCTAAATTTCTTCCCA+AGG 0.521166 7:+78640246 None:intergenic
TTCACTATCTGTGCTAGCCA+TGG 0.524133 7:+78643410 None:intergenic
CCGTTCGTCATCTCTATCCA+TGG 0.526877 7:-78643427 MsG0780040518.01.T01:CDS
TGGCCGCCACGGTTTGTTGG+TGG 0.527737 7:+78643456 None:intergenic
CAAAGCATTGACTAACAACT+CGG 0.528849 7:-78637189 MsG0780040518.01.T01:three_prime_UTR
AGTATTGATTGGTTCGAAGT+TGG 0.529886 7:+78638742 None:intergenic
AAATACAACAGAGTTATAAA+GGG 0.530062 7:+78638436 None:intergenic
AGTAAATGTATTATTTGCTG+TGG 0.530358 7:-78641254 MsG0780040518.01.T01:three_prime_UTR
AGAGATGATGCTGTCATCAA+TGG 0.530421 7:-78643006 MsG0780040518.01.T01:CDS
ATTAATACTAATATTTGACT+TGG 0.533255 7:-78639554 MsG0780040518.01.T01:three_prime_UTR
AATTGTGTAGGAGAGGTTTG+GGG 0.534119 7:-78638236 MsG0780040518.01.T01:three_prime_UTR
AAGTCTCATTAGTCTAGGAC+GGG 0.534585 7:-78639755 MsG0780040518.01.T01:three_prime_UTR
CTCTGATGTGATTTATATCA+GGG 0.537108 7:-78639151 MsG0780040518.01.T01:three_prime_UTR
TAACCAAAACAAAATAAAGA+AGG 0.537929 7:-78639436 MsG0780040518.01.T01:three_prime_UTR
GATCTCCAATCACAAAGGTT+GGG 0.539620 7:+78640186 None:intergenic
AAGCCCTTATGGGTGGTGTA+TGG 0.540452 7:-78640006 MsG0780040518.01.T01:three_prime_UTR
GATTGGAGATCCCATGAAGA+AGG 0.541046 7:-78640174 MsG0780040518.01.T01:three_prime_UTR
TTATAGATGTGTTAGTTACC+AGG 0.542201 7:+78637878 None:intergenic
ATTAATTTATTATTCTCGAA+TGG 0.542942 7:-78638632 MsG0780040518.01.T01:three_prime_UTR
ATTAGCAATCTCAAGAACTC+TGG 0.548796 7:+78636978 None:intergenic
TCTCTAACACGCTGCAGGGA+CGG 0.549481 7:-78638065 MsG0780040518.01.T01:three_prime_UTR
ATCCGTATATAAAACCCCTT+GGG 0.549611 7:-78640262 MsG0780040518.01.T01:three_prime_UTR
GATCCGTATATAAAACCCCT+TGG 0.550163 7:-78640263 MsG0780040518.01.T01:three_prime_UTR
AACATACTAGATTATCATAG+TGG 0.552307 7:+78641591 None:intergenic
ATTGTCTTACTCTAATACAA+TGG 0.552994 7:+78640742 None:intergenic
TAAGTCTCATTAGTCTAGGA+CGG 0.553745 7:-78639756 MsG0780040518.01.T01:three_prime_UTR
TCCTACTAGCAGAAGAACTA+CGG 0.555436 7:-78643169 MsG0780040518.01.T01:CDS
TTGTTATGTGTTTCATGCTG+TGG 0.556156 7:-78638807 MsG0780040518.01.T01:three_prime_UTR
CGGAACGGTGTAGCAAGCTA+TGG 0.556254 7:+78639730 None:intergenic
GTATTGTTATGTCTAAGGAA+TGG 0.556443 7:-78642023 MsG0780040518.01.T01:CDS
AACGGTGGCTATGGCCGCCA+CGG 0.556481 7:+78643445 None:intergenic
AAAACCACCACCACGTAATG+AGG 0.557435 7:+78637398 None:intergenic
ACTCATACATACACATGTCA+AGG 0.558317 7:+78640852 None:intergenic
TTTGAGGAGGATTAGAGAAG+AGG 0.558611 7:-78643262 MsG0780040518.01.T01:CDS
TAAAGGGAATTGTGTAGGAG+AGG 0.559882 7:-78638243 MsG0780040518.01.T01:three_prime_UTR
CCACAATTCTTGCTGTTACG+CGG 0.560391 7:+78639860 None:intergenic
TTATCTACCACAATCGCCAA+AGG 0.563144 7:+78643216 None:intergenic
GTGTTAAGTCTCATTAGTCT+AGG 0.563886 7:-78639760 MsG0780040518.01.T01:three_prime_UTR
TTCATCTGATATATGGCTGG+TGG 0.565413 7:+78643554 None:intergenic
CCGCGTAACAGCAAGAATTG+TGG 0.565887 7:-78639860 MsG0780040518.01.T01:three_prime_UTR
GTCGAGGTGGTGTTAAAGCA+TGG 0.566949 7:+78643493 None:intergenic
CACCTATATGAGTGTCAAGT+GGG 0.567684 7:-78639960 MsG0780040518.01.T01:three_prime_UTR
TTAGCTGTTTCATGTTCATG+AGG 0.567830 7:+78643312 None:intergenic
GCCGTAGTTCTTCTGCTAGT+AGG 0.572201 7:+78643168 None:intergenic
TATCTACCACAATCGCCAAA+GGG 0.572915 7:+78643217 None:intergenic
GGTTGTTGAGGAACCTAACT+GGG 0.574097 7:-78638553 MsG0780040518.01.T01:three_prime_UTR
AACAAACACAAAACCATGGA+AGG 0.575102 7:+78639014 None:intergenic
AGCAGAAGAACTACGGCTGG+TGG 0.576648 7:-78643162 MsG0780040518.01.T01:CDS
TTACCATAGTAACTCAAGCT+AGG 0.579610 7:+78638668 None:intergenic
ATAACCTCATTACGTGGTGG+TGG 0.581063 7:-78637402 MsG0780040518.01.T01:three_prime_UTR
TCATAAGCGCATATCCTCCC+AGG 0.581600 7:+78639113 None:intergenic
TACATCTACGATGTTTACCC+AGG 0.584068 7:-78639701 MsG0780040518.01.T01:three_prime_UTR
ACTAGCAGAAGAACTACGGC+TGG 0.586567 7:-78643165 MsG0780040518.01.T01:CDS
CAATAATTAGACAATAATGC+AGG 0.586780 7:+78637349 None:intergenic
GGAGGAGGTGGAAGTCGAGG+TGG 0.587365 7:+78643480 None:intergenic
GTTATATTTACTCAATGTGG+GGG 0.590411 7:-78640599 MsG0780040518.01.T01:three_prime_UTR
CTCGAAGAAAAGCCGAAGAG+AGG 0.591953 7:-78637038 MsG0780040518.01.T01:three_prime_UTR
AGACACTTGTTGTATGCAAG+AGG 0.592804 7:+78639816 None:intergenic
ATGATGCTGTCATCAATGGA+TGG 0.593521 7:-78643002 MsG0780040518.01.T01:CDS
AGTTATATTTACTCAATGTG+GGG 0.595620 7:-78640600 MsG0780040518.01.T01:three_prime_UTR
TAGATGGTGAGAAACATGTT+TGG 0.596061 7:+78637287 None:intergenic
ATTGTGTAGGAGAGGTTTGG+GGG 0.597255 7:-78638235 MsG0780040518.01.T01:three_prime_UTR
GTGCTCTGATATTGCTAACA+TGG 0.599524 7:-78641772 MsG0780040518.01.T01:three_prime_UTR
TATAAGTATATAACAAAACA+TGG 0.600109 7:-78637607 MsG0780040518.01.T01:three_prime_UTR
CTCATACATACACATGTCAA+GGG 0.601615 7:+78640853 None:intergenic
AAAATGATGTTAAGCCAACA+CGG 0.602176 7:-78638338 MsG0780040518.01.T01:three_prime_UTR
GCTTGATAACATAAAACCAA+AGG 0.606758 7:-78638391 MsG0780040518.01.T01:three_prime_UTR
ACATAACATCTCTGTATGTG+TGG 0.609110 7:+78639333 None:intergenic
AATTTGAGTATTTAACGTAG+AGG 0.614587 7:+78637243 None:intergenic
AGTACTCGTTCAAGTGGTCA+AGG 0.616828 7:-78643138 MsG0780040518.01.T01:CDS
GGAACCTAACTGGGGTGTAG+GGG 0.617172 7:-78638544 MsG0780040518.01.T01:three_prime_UTR
TCACCTATATGAGTGTCAAG+TGG 0.619417 7:-78639961 MsG0780040518.01.T01:three_prime_UTR
TTAGTCAAGTCAAAATGATG+TGG 0.619692 7:+78639517 None:intergenic
TTAGTCAAGTCAAAATGATG+TGG 0.619692 7:+78642779 None:intergenic
ATGAATACCAGGCATGCGCA+CGG 0.619816 7:-78639898 MsG0780040518.01.T01:three_prime_UTR
TCCCTAAATTTCTTCCCAAG+GGG 0.620393 7:+78640248 None:intergenic
ACATCGTAGATGTAATGCAT+CGG 0.620706 7:+78639710 None:intergenic
TATCATATTGATATATGGTG+TGG 0.622529 7:-78640995 MsG0780040518.01.T01:three_prime_UTR
TTAGAGTACAATCAACCGCT+AGG 0.622895 7:+78637913 None:intergenic
AACCAATCAATACTTGACAA+AGG 0.628794 7:-78638733 MsG0780040518.01.T01:three_prime_UTR
GAGACGGAACAGGATCAAAA+GGG 0.628833 7:+78643190 None:intergenic
GGTGGAAGTACTCGTTCAAG+TGG 0.633101 7:-78643144 MsG0780040518.01.T01:CDS
CTATTGTTAGTACTTACCGA+TGG 0.633988 7:-78641359 MsG0780040518.01.T01:three_prime_UTR
AGTAAACAAACACAAAACCA+TGG 0.635148 7:+78639010 None:intergenic
CATGACATATGTTAGTGTTG+AGG 0.636347 7:+78637785 None:intergenic
GTTCTTCTGCTAGTAGGAGA+CGG 0.637966 7:+78643174 None:intergenic
TGATGCTGTCATCAATGGAT+GGG 0.638726 7:-78643001 MsG0780040518.01.T01:CDS
AGCCACACACATCATACAGT+GGG 0.640951 7:+78638041 None:intergenic
GGGCCGCTTGCATGAGACCG+TGG 0.644989 7:-78639939 MsG0780040518.01.T01:three_prime_UTR
CCGCCACGGTCTCATGCAAG+CGG 0.645960 7:+78639936 None:intergenic
TCATTCTCTAACACGCTGCA+GGG 0.647385 7:-78638069 MsG0780040518.01.T01:three_prime_UTR
ATAACAATAACAATTTGAGG+AGG 0.648714 7:-78643275 MsG0780040518.01.T01:CDS
AAATGATGTTAAGCCAACAC+GGG 0.651028 7:-78638337 MsG0780040518.01.T01:three_prime_UTR
CATTAACTAGATATAACCAT+CGG 0.651746 7:+78641343 None:intergenic
AGAGAGGAAAGCATCAGCAG+AGG 0.652381 7:-78637022 MsG0780040518.01.T01:three_prime_UTR
CCTGATATAAATCACATCAG+AGG 0.652894 7:+78639152 None:intergenic
GTAATCCATTATATAACATG+AGG 0.653232 7:+78639054 None:intergenic
ACCTATATGAGTGTCAAGTG+GGG 0.653292 7:-78639959 MsG0780040518.01.T01:three_prime_UTR
TTGATGCAAAGATATCAGCT+TGG 0.653643 7:-78643068 MsG0780040518.01.T01:CDS
GAGGATATGCGCTTATGAGG+CGG 0.659542 7:-78639108 MsG0780040518.01.T01:three_prime_UTR
AGCTTGAATCTGATAAACAC+AGG 0.664979 7:+78639184 None:intergenic
AAAGCATTGACTAACAACTC+GGG 0.665684 7:-78637188 MsG0780040518.01.T01:three_prime_UTR
CCGCTTGCATGAGACCGTGG+CGG 0.668519 7:-78639936 MsG0780040518.01.T01:three_prime_UTR
TGACATATGTTAGTGTTGAG+GGG 0.669219 7:+78637787 None:intergenic
GCGTAACAGCAAGAATTGTG+GGG 0.670409 7:-78639858 MsG0780040518.01.T01:three_prime_UTR
AGTGCTCTAGAGACCCGCCA+CGG 0.673653 7:+78639922 None:intergenic
TGTTTCCTTACTCGGCCTAG+CGG 0.674993 7:-78637928 MsG0780040518.01.T01:three_prime_UTR
TGGTAGTGAAGAACATGTGT+CGG 0.675585 7:-78643115 MsG0780040518.01.T01:CDS
CGTAACAGCAAGAATTGTGG+GGG 0.685277 7:-78639857 MsG0780040518.01.T01:three_prime_UTR
CATGGGATCTCCAATCACAA+AGG 0.685618 7:+78640181 None:intergenic
CCTCCACCACCAACAAACCG+TGG 0.687594 7:-78643462 MsG0780040518.01.T01:CDS
TAGTGAAGAACATGTGTCGG+TGG 0.696232 7:-78643112 MsG0780040518.01.T01:CDS
TTCATGGATGAAGAAAGTTG+AGG 0.696748 7:-78642953 MsG0780040518.01.T01:CDS
CCATGGATAGAGATGACGAA+CGG 0.697357 7:+78643427 None:intergenic
GACCCACTGTATGATGTGTG+TGG 0.700369 7:-78638043 MsG0780040518.01.T01:three_prime_UTR
TTACCATAAGCCCTTATGGG+TGG 0.705582 7:-78640013 MsG0780040518.01.T01:three_prime_UTR
AAGCCAATAACCTCATTACG+TGG 0.706884 7:-78637408 MsG0780040518.01.T01:three_prime_UTR
TGGATAGAGATGACGAACGG+TGG 0.707481 7:+78643430 None:intergenic
TAGCCACACACATCATACAG+TGG 0.707497 7:+78638040 None:intergenic
ACTCGTTCAAGTGGTCAAGG+TGG 0.708848 7:-78643135 MsG0780040518.01.T01:CDS
CCAATAACCTCATTACGTGG+TGG 0.709849 7:-78637405 MsG0780040518.01.T01:three_prime_UTR
CCACCACCAACAAACCGTGG+CGG 0.715624 7:-78643459 MsG0780040518.01.T01:CDS
GTAGATGTAATGCATCGGAA+CGG 0.723090 7:+78639715 None:intergenic
AGAACATGTTGTATCCTGGG+AGG 0.725373 7:-78639127 MsG0780040518.01.T01:three_prime_UTR
CAGCATGAAACACATAACAA+CGG 0.730460 7:+78638810 None:intergenic
GTTGTTGAGGAACCTAACTG+GGG 0.800759 7:-78638552 MsG0780040518.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTTTAAAAAAAAA+TGG + Chr7:78642480-78642499 None:intergenic 0.0%
!! AAATTATGAAAAATATATTG+TGG - Chr7:78639546-78639565 MsG0780040518.01.T01:three_prime_UTR 10.0%
!! AATATTAAAAAGAATAATCA+AGG + Chr7:78638131-78638150 None:intergenic 10.0%
!! AATTATGAAAAATATATTGT+GGG - Chr7:78639547-78639566 MsG0780040518.01.T01:three_prime_UTR 10.0%
!! ATATTAAAAAGAATAATCAA+GGG + Chr7:78638130-78638149 None:intergenic 10.0%
!! ATGAGAAAATATATATTTAT+GGG - Chr7:78639618-78639637 MsG0780040518.01.T01:three_prime_UTR 10.0%
!! ATTATATGAAGAAAAAAAAT+TGG + Chr7:78642322-78642341 None:intergenic 10.0%
!! TAAAAGTTAAATTCTAATTA+GGG + Chr7:78642055-78642074 None:intergenic 10.0%
!! TATATTAATACTAAGATAAA+AGG - Chr7:78641721-78641740 MsG0780040518.01.T01:three_prime_UTR 10.0%
!! TATGAGAAAATATATATTTA+TGG - Chr7:78639617-78639636 MsG0780040518.01.T01:three_prime_UTR 10.0%
!! TTAAAAGTTAAATTCTAATT+AGG + Chr7:78642056-78642075 None:intergenic 10.0%
!! TTATATGAAGAAAAAAAATT+GGG + Chr7:78642321-78642340 None:intergenic 10.0%
!!! AATTAGAATTTAACTTTTAA+AGG - Chr7:78642056-78642075 MsG0780040518.01.T01:intron 10.0%
!!! ATTAGAATTTAACTTTTAAA+GGG - Chr7:78642057-78642076 MsG0780040518.01.T01:intron 10.0%
!!! TTAATATTGAAAACTTTTTT+AGG - Chr7:78643424-78643443 MsG0780040518.01.T01:CDS 10.0%
!!! TTTTGTTATATACTTATATA+TGG + Chr7:78642707-78642726 None:intergenic 10.0%
!! ATTAATACTAATATTTGACT+TGG - Chr7:78637500-78637519 MsG0780040518.01.T01:three_prime_UTR 15.0%
!! ATTAATTTATTATTCTCGAA+TGG - Chr7:78641684-78641703 MsG0780040518.01.T01:three_prime_UTR 15.0%
!! ATTATTTCATTGAATAATGA+AGG + Chr7:78641847-78641866 None:intergenic 15.0%
!! ATTTCAAAAGTTATAACAAA+AGG + Chr7:78640655-78640674 None:intergenic 15.0%
!! CATATATTATATACAATCAA+TGG + Chr7:78642354-78642373 None:intergenic 15.0%
!! CTTTGTATTAAAATAATACA+AGG - Chr7:78639835-78639854 MsG0780040518.01.T01:three_prime_UTR 15.0%
!! GCTAAATAATATAAAATTGA+TGG - Chr7:78640256-78640275 MsG0780040518.01.T01:three_prime_UTR 15.0%
!! TATAAGTATATAACAAAACA+TGG - Chr7:78642709-78642728 MsG0780040518.01.T01:intron 15.0%
!! TATATAAAAATAGCATGATA+AGG - Chr7:78643517-78643536 MsG0780040518.01.T01:CDS 15.0%
!! TTAAGATTGTTGTAAAAATT+AGG + Chr7:78638206-78638225 None:intergenic 15.0%
!!! AAAAAAGTAATATCAAGTTT+TGG - Chr7:78642614-78642633 MsG0780040518.01.T01:intron 15.0%
!!! AGATTTTCTTATTTGTTATT+TGG - Chr7:78638689-78638708 MsG0780040518.01.T01:three_prime_UTR 15.0%
!!! ATTTATTCTCTCTTTTAAAA+CGG - Chr7:78637568-78637587 MsG0780040518.01.T01:three_prime_UTR 15.0%
!!! CTTGTATTATTTTAATACAA+AGG + Chr7:78639837-78639856 None:intergenic 15.0%
!!! GTATTTTTTAAACATATTTG+TGG - Chr7:78638825-78638844 MsG0780040518.01.T01:three_prime_UTR 15.0%
!!! TAATTTTTACAACAATCTTA+AGG - Chr7:78638205-78638224 MsG0780040518.01.T01:three_prime_UTR 15.0%
!!! TATGTATAGATTTATTTTAC+AGG + Chr7:78639695-78639714 None:intergenic 15.0%
!!! TTATAACTTTTGAAATATGT+GGG - Chr7:78640659-78640678 MsG0780040518.01.T01:three_prime_UTR 15.0%
!!! TTTTTAAAAAAAAATGGCTT+AGG + Chr7:78642474-78642493 None:intergenic 15.0%
!!! TTTTTTTTAGACAAACATTA+GGG + Chr7:78642600-78642619 None:intergenic 15.0%
!! AAACAAAGAATATGAAGAAA+AGG + Chr7:78638494-78638513 None:intergenic 20.0%
!! AAATACAACAGAGTTATAAA+GGG + Chr7:78641883-78641902 None:intergenic 20.0%
!! ACAATAACAATAACAATTTG+AGG - Chr7:78637038-78637057 MsG0780040518.01.T01:three_prime_UTR 20.0%
!! ACTTATAGATTTATTCTCAT+TGG + Chr7:78639880-78639899 None:intergenic 20.0%
!! CAAGTCTATAATAATAAACT+TGG + Chr7:78639976-78639995 None:intergenic 20.0%
!! CACTCTTTAACTAATTAAAA+AGG + Chr7:78643475-78643494 None:intergenic 20.0%
!! CTAGTTATCATATTGATATA+TGG - Chr7:78639316-78639335 MsG0780040518.01.T01:three_prime_UTR 20.0%
!! GTGAAATAAATAAATGATTG+TGG + Chr7:78642833-78642852 None:intergenic 20.0%
!! TAACCAAAACAAAATAAAGA+AGG - Chr7:78637618-78637637 MsG0780040518.01.T01:three_prime_UTR 20.0%
!! TAACTAACACATCTATAAAA+TGG - Chr7:78642443-78642462 MsG0780040518.01.T01:intron 20.0%
!! TATACTTAATGAAAACCAAT+TGG - Chr7:78643566-78643585 MsG0780040518.01.T01:CDS 20.0%
!! TGCAAATTGTTGTAAAAATT+AGG + Chr7:78641468-78641487 None:intergenic 20.0%
!! TGGATATGTTAGATTATTAA+CGG - Chr7:78642729-78642748 MsG0780040518.01.T01:intron 20.0%
!! TTGAAGGAATAGTTAATTTA+AGG + Chr7:78638464-78638483 None:intergenic 20.0%
!!! AACTTAGAAGAAAGATTTTT+TGG + Chr7:78643392-78643411 None:intergenic 20.0%
!!! AATTTCATTGTAGTTTGTAA+TGG + Chr7:78642021-78642040 None:intergenic 20.0%
!!! AGACAAATTTTAGTTTGTTA+GGG - Chr7:78642208-78642227 MsG0780040518.01.T01:intron 20.0%
!!! ATATTTTTTTGTTAGGGATT+TGG - Chr7:78638270-78638289 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! ATTGACTCCAAATTTTATTT+TGG + Chr7:78638919-78638938 None:intergenic 20.0%
!!! CTTTTTTTTAGACAAACATT+AGG + Chr7:78642601-78642620 None:intergenic 20.0%
!!! GATCAATGATTATGTTATTT+TGG - Chr7:78639146-78639165 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! GTTATAACTTTTGAAATATG+TGG - Chr7:78640658-78640677 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! GTTTTTATACGAAAGAAAAA+CGG + Chr7:78637780-78637799 None:intergenic 20.0%
!!! TAGACAAATTTTAGTTTGTT+AGG - Chr7:78642207-78642226 MsG0780040518.01.T01:intron 20.0%
!!! TATAACTTTTGAAATATGTG+GGG - Chr7:78640660-78640679 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TATTTTTTTGTTAGGGATTT+GGG - Chr7:78638271-78638290 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TCGATAAAAACATGAATTTT+AGG + Chr7:78638577-78638596 None:intergenic 20.0%
!!! TCTTTGAAAAGTATTTTCTA+GGG - Chr7:78638606-78638625 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TGGGATTTATTTTTCAATTA+TGG - Chr7:78639637-78639656 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TGTAGCATTGAAAATTTAAT+TGG - Chr7:78639122-78639141 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TGTAGCATTTTTTTTTTTGA+GGG - Chr7:78639090-78639109 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TTATATAATGGATTACTGTT+TGG - Chr7:78638007-78638026 MsG0780040518.01.T01:three_prime_UTR 20.0%
!!! TTTTTTTAGACAAACATTAG+GGG + Chr7:78642599-78642618 None:intergenic 20.0%
! AAAAAAATTGGGTAATCTTC+TGG + Chr7:78642310-78642329 None:intergenic 25.0%
! AAAACTGTGGCAATATTAAT+AGG + Chr7:78639244-78639263 None:intergenic 25.0%
! AACATACTAGATTATCATAG+TGG + Chr7:78638728-78638747 None:intergenic 25.0%
! AAGTTGCTAAAATTAACAAC+AGG - Chr7:78637281-78637300 MsG0780040518.01.T01:three_prime_UTR 25.0%
! AATTAACTATTCCTTCAAAC+AGG - Chr7:78638466-78638485 MsG0780040518.01.T01:three_prime_UTR 25.0%
! AATTTGAGTATTTAACGTAG+AGG + Chr7:78643076-78643095 None:intergenic 25.0%
! ACTGATGTATTGAAACTAAA+AGG + Chr7:78637753-78637772 None:intergenic 25.0%
! AGAGTTATATTTACTCAATG+TGG - Chr7:78639714-78639733 MsG0780040518.01.T01:three_prime_UTR 25.0%
! AGTTATATTTACTCAATGTG+GGG - Chr7:78639716-78639735 MsG0780040518.01.T01:three_prime_UTR 25.0%
! ATAACAATAACAATTTGAGG+AGG - Chr7:78637041-78637060 MsG0780040518.01.T01:three_prime_UTR 25.0%
! ATCAGTCTAATATACAATCT+TGG - Chr7:78637836-78637855 MsG0780040518.01.T01:three_prime_UTR 25.0%
! ATGCATGCCAAAATAAAATT+TGG - Chr7:78638909-78638928 MsG0780040518.01.T01:three_prime_UTR 25.0%
! ATTGTCTTACTCTAATACAA+TGG + Chr7:78639577-78639596 None:intergenic 25.0%
! ATTTGCATCATAAAAAACTG+TGG + Chr7:78639257-78639276 None:intergenic 25.0%
! CAAATACAACAGAGTTATAA+AGG + Chr7:78641884-78641903 None:intergenic 25.0%
! CAATAATTAGACAATAATGC+AGG + Chr7:78642970-78642989 None:intergenic 25.0%
! CATTAACTAGATATAACCAT+CGG + Chr7:78638976-78638995 None:intergenic 25.0%
! GAAAAAAAATGCTAGTAATG+AGG + Chr7:78642114-78642133 None:intergenic 25.0%
! GAGTTATATTTACTCAATGT+GGG - Chr7:78639715-78639734 MsG0780040518.01.T01:three_prime_UTR 25.0%
! GATTTACATCATAGAGAAAA+TGG + Chr7:78638872-78638891 None:intergenic 25.0%
! GTAATCCATTATATAACATG+AGG + Chr7:78638003-78638022 None:intergenic 25.0%
! GTCAATATTTGTGAATTTAG+CGG - Chr7:78640031-78640050 MsG0780040518.01.T01:three_prime_UTR 25.0%
! TATAGACTTGATGAAATAAG+AGG - Chr7:78639986-78640005 MsG0780040518.01.T01:three_prime_UTR 25.0%
! TATCATATTGATATATGGTG+TGG - Chr7:78639321-78639340 MsG0780040518.01.T01:three_prime_UTR 25.0%
! TCAGTCTAATATACAATCTT+GGG - Chr7:78637837-78637856 MsG0780040518.01.T01:three_prime_UTR 25.0%
! TCTTATACAATTGAATTGAC+AGG - Chr7:78639507-78639526 MsG0780040518.01.T01:three_prime_UTR 25.0%
! TTGTTAAACAAAATGCTAGA+TGG + Chr7:78643048-78643067 None:intergenic 25.0%
! TTTCCAAAATATACTTCATC+AGG + Chr7:78639771-78639790 None:intergenic 25.0%
! TTTCCTATAGTGTATGATAA+TGG - Chr7:78640224-78640243 MsG0780040518.01.T01:three_prime_UTR 25.0%
!! AGTAAATGTATTATTTGCTG+TGG - Chr7:78639062-78639081 MsG0780040518.01.T01:three_prime_UTR 25.0%
!! GGTGAAGAATTATTTTCTAA+TGG - Chr7:78641742-78641761 MsG0780040518.01.T01:three_prime_UTR 25.0%
!! TTATTTTCTAATGGTTGTTG+AGG - Chr7:78641751-78641770 MsG0780040518.01.T01:three_prime_UTR 25.0%
!! TTTACAAATTGACTTTGATC+TGG - Chr7:78639408-78639427 MsG0780040518.01.T01:three_prime_UTR 25.0%
!! TTTTACAACAATTTGCATGT+AGG - Chr7:78641471-78641490 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! AATGCTTTGTTTTACTACAA+TGG + Chr7:78643116-78643135 None:intergenic 25.0%
!!! ATAACTTTTGAAATATGTGG+GGG - Chr7:78640661-78640680 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! CATGACATGTGATTTTTTTT+GGG + Chr7:78643194-78643213 None:intergenic 25.0%
!!! CTCTTTGAAAAGTATTTTCT+AGG - Chr7:78638605-78638624 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! CTTTGAAAAGTATTTTCTAG+GGG - Chr7:78638607-78638626 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! CTTTTTTAGGCACAAAAAAA+AGG - Chr7:78643437-78643456 MsG0780040518.01.T01:CDS 25.0%
!!! GACAAATTTTAGTTTGTTAG+GGG - Chr7:78642209-78642228 MsG0780040518.01.T01:intron 25.0%
!!! GCAATATTAATAGGTTTTGT+AGG + Chr7:78639235-78639254 None:intergenic 25.0%
!!! GTGTAGCATTTTTTTTTTTG+AGG - Chr7:78639089-78639108 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! TATTATTTTTGAGAAGTAGG+TGG - Chr7:78637666-78637685 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! TTTGAAAAGTATTTTCTAGG+GGG - Chr7:78638608-78638627 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! TTTTTTCGATAGAAAGATAG+TGG - Chr7:78639033-78639052 MsG0780040518.01.T01:three_prime_UTR 25.0%
!!! TTTTTTCTTCTTCTTTCTCA+CGG - Chr7:78637392-78637411 MsG0780040518.01.T01:three_prime_UTR 25.0%
AAAATGATGTTAAGCCAACA+CGG - Chr7:78641978-78641997 MsG0780040518.01.T01:three_prime_UTR 30.0%
AACCAATCAATACTTGACAA+AGG - Chr7:78641583-78641602 MsG0780040518.01.T01:three_prime_UTR 30.0%
AATAATCAAGGGAGATTTCA+AGG + Chr7:78638119-78638138 None:intergenic 30.0%
AGTAAACAAACACAAAACCA+TGG + Chr7:78638047-78638066 None:intergenic 30.0%
ATGCTGTGGTAATAATTAGT+AGG - Chr7:78641523-78641542 MsG0780040518.01.T01:three_prime_UTR 30.0%
CACACTAAAATTTCACAAGT+TGG + Chr7:78639949-78639968 None:intergenic 30.0%
CATCCATTATCATACACTAT+AGG + Chr7:78640230-78640249 None:intergenic 30.0%
CTCTGATGTGATTTATATCA+GGG - Chr7:78637903-78637922 MsG0780040518.01.T01:three_prime_UTR 30.0%
GAAATGAAAGCGAAAAATTG+TGG - Chr7:78638330-78638349 MsG0780040518.01.T01:three_prime_UTR 30.0%
GTATTGTTATGTCTAAGGAA+TGG - Chr7:78638293-78638312 MsG0780040518.01.T01:three_prime_UTR 30.0%
GTATTTCATGTTTCCTTACT+CGG - Chr7:78642380-78642399 MsG0780040518.01.T01:intron 30.0%
GTTATATTTACTCAATGTGG+GGG - Chr7:78639717-78639736 MsG0780040518.01.T01:three_prime_UTR 30.0%
TATGGTGTGGTCATATATTA+TGG - Chr7:78639334-78639353 MsG0780040518.01.T01:three_prime_UTR 30.0%
TGATTTAGACGTTAAACCTT+TGG + Chr7:78641944-78641963 None:intergenic 30.0%
TTAGTCAAGTCAAAATGATG+TGG + Chr7:78637540-78637559 None:intergenic 30.0%
TTATAGATGTGTTAGTTACC+AGG + Chr7:78642441-78642460 None:intergenic 30.0%
TTTATACGAAAGAAAAACGG+TGG + Chr7:78637777-78637796 None:intergenic 30.0%
! AAGAAGGCAGTTATATTTTG+AGG - Chr7:78637634-78637653 MsG0780040518.01.T01:three_prime_UTR 30.0%
! AAGGTTAAAAAGAGTTTTCC+TGG + Chr7:78640636-78640655 None:intergenic 30.0%
! AGACCTGATGAAGTATATTT+TGG - Chr7:78639765-78639784 MsG0780040518.01.T01:three_prime_UTR 30.0%
! AGGTTAAAAAGAGTTTTCCT+GGG + Chr7:78640635-78640654 None:intergenic 30.0%
! ATGACATATGTTAGTGTTGA+GGG + Chr7:78642533-78642552 None:intergenic 30.0%
! ATTAGTTAAAGAGTGCAAGA+TGG - Chr7:78643480-78643499 MsG0780040518.01.T01:CDS 30.0%
! CTGTTATTTGTTCATCTTCT+TGG + Chr7:78636790-78636809 None:intergenic 30.0%
! GCTTGATAACATAAAACCAA+AGG - Chr7:78641925-78641944 MsG0780040518.01.T01:three_prime_UTR 30.0%
! TCAGTTCTAACTGATTAATC+AGG + Chr7:78638770-78638789 None:intergenic 30.0%
! TGTAGTTTGTAATGGCTAAT+TGG + Chr7:78642013-78642032 None:intergenic 30.0%
! TTTGGGTATTGTTATGTCTA+AGG - Chr7:78638288-78638307 MsG0780040518.01.T01:three_prime_UTR 30.0%
! TTTTCCAATGACAGCAAAAA+GGG - Chr7:78643004-78643023 MsG0780040518.01.T01:CDS 30.0%
!! ACTTTTAAAGGGAATTGTGT+AGG - Chr7:78642068-78642087 MsG0780040518.01.T01:intron 30.0%
!! AGTTATATTTTGAGGATGTG+CGG - Chr7:78637642-78637661 MsG0780040518.01.T01:three_prime_UTR 30.0%
!! ATCCTTTGTCAAGTATTGAT+TGG + Chr7:78641588-78641607 None:intergenic 30.0%
!! CTTGGTTTTCATCTGATATA+TGG + Chr7:78636772-78636791 None:intergenic 30.0%
!! TTGACTTGGTCTAATTCTTT+AGG - Chr7:78637514-78637533 MsG0780040518.01.T01:three_prime_UTR 30.0%
!!! AATATCAAGTTTTGGTGTTG+AGG - Chr7:78642622-78642641 MsG0780040518.01.T01:intron 30.0%
!!! CTGCCTTCTTTATTTTGTTT+TGG + Chr7:78637624-78637643 None:intergenic 30.0%
!!! GCATGACATGTGATTTTTTT+TGG + Chr7:78643195-78643214 None:intergenic 30.0%
!!! GGCTATTATTTTTGAGAAGT+AGG - Chr7:78637663-78637682 MsG0780040518.01.T01:three_prime_UTR 30.0%
!!! TAGAAGAAAGATTTTTTGGC+AGG + Chr7:78643388-78643407 None:intergenic 30.0%
AAATGATGTTAAGCCAACAC+GGG - Chr7:78641979-78641998 MsG0780040518.01.T01:three_prime_UTR 35.0%
AACAAACACAAAACCATGGA+AGG + Chr7:78638043-78638062 None:intergenic 35.0%
AAGAAAAGGAACCTGTTTGA+AGG + Chr7:78638480-78638499 None:intergenic 35.0%
ACATAACATCTCTGTATGTG+TGG + Chr7:78637724-78637743 None:intergenic 35.0%
ACATCGTAGATGTAATGCAT+CGG + Chr7:78640609-78640628 None:intergenic 35.0%
ACTCATACATACACATGTCA+AGG + Chr7:78639467-78639486 None:intergenic 35.0%
ACTCGAAAACGACAAGTAAT+GGG - Chr7:78640105-78640124 MsG0780040518.01.T01:three_prime_UTR 35.0%
AGACTTAACACACAGTGAAT+TGG + Chr7:78640547-78640566 None:intergenic 35.0%
AGCTTGAATCTGATAAACAC+AGG + Chr7:78637873-78637892 None:intergenic 35.0%
ATCCGTATATAAAACCCCTT+GGG - Chr7:78640054-78640073 MsG0780040518.01.T01:three_prime_UTR 35.0%
ATGATTACCATAAGCCCTTA+TGG - Chr7:78640299-78640318 MsG0780040518.01.T01:three_prime_UTR 35.0%
ATTAGCAATCTCAAGAACTC+TGG + Chr7:78643341-78643360 None:intergenic 35.0%
CAGCATGAAACACATAACAA+CGG + Chr7:78641509-78641528 None:intergenic 35.0%
CATGACATATGTTAGTGTTG+AGG + Chr7:78642534-78642553 None:intergenic 35.0%
CATGAGGACTTATGTTGTTA+GGG + Chr7:78636991-78637010 None:intergenic 35.0%
CCTCTGATGTGATTTATATC+AGG - Chr7:78637902-78637921 MsG0780040518.01.T01:three_prime_UTR 35.0%
CCTGATATAAATCACATCAG+AGG + Chr7:78637905-78637924 None:intergenic 35.0%
CTATTGTTAGTACTTACCGA+TGG - Chr7:78638957-78638976 MsG0780040518.01.T01:three_prime_UTR 35.0%
CTCATACATACACATGTCAA+GGG + Chr7:78639466-78639485 None:intergenic 35.0%
GAGTCAATCACATGCTAATT+TGG - Chr7:78638931-78638950 MsG0780040518.01.T01:three_prime_UTR 35.0%
TAGAGAAGAGGATCATATGA+TGG - Chr7:78637066-78637085 MsG0780040518.01.T01:three_prime_UTR 35.0%
TAGATGGTGAGAAACATGTT+TGG + Chr7:78643032-78643051 None:intergenic 35.0%
TCACGCCTCATGTTATATAA+TGG - Chr7:78637995-78638014 MsG0780040518.01.T01:three_prime_UTR 35.0%
TCATGAGGACTTATGTTGTT+AGG + Chr7:78636992-78637011 None:intergenic 35.0%
TGATTACCATAAGCCCTTAT+GGG - Chr7:78640300-78640319 MsG0780040518.01.T01:three_prime_UTR 35.0%
TTACCATAGTAACTCAAGCT+AGG + Chr7:78641651-78641670 None:intergenic 35.0%
TTCATGGATGAAGAAAGTTG+AGG - Chr7:78637363-78637382 MsG0780040518.01.T01:three_prime_UTR 35.0%
TTCCCTAAATTTCTTCCCAA+GGG + Chr7:78640072-78640091 None:intergenic 35.0%
TTGATGCAAAGATATCAGCT+TGG - Chr7:78637248-78637267 MsG0780040518.01.T01:three_prime_UTR 35.0%
TTGCATACAACAAGTGTCTT+GGG - Chr7:78640504-78640523 MsG0780040518.01.T01:three_prime_UTR 35.0%
TTGTTATGTGTTTCATGCTG+TGG - Chr7:78641509-78641528 MsG0780040518.01.T01:three_prime_UTR 35.0%
TTTCCAATGACAGCAAAAAG+GGG - Chr7:78643005-78643024 MsG0780040518.01.T01:CDS 35.0%
TTTCCAATGCAATGCAAAAG+AGG + Chr7:78642877-78642896 None:intergenic 35.0%
TTTCCCTAAATTTCTTCCCA+AGG + Chr7:78640073-78640092 None:intergenic 35.0%
! AATTTCACAAGTTGGCTTAG+TGG + Chr7:78639941-78639960 None:intergenic 35.0%
! CTTTTCCAATGACAGCAAAA+AGG - Chr7:78643003-78643022 MsG0780040518.01.T01:CDS 35.0%
! GTGTTAAGTCTCATTAGTCT+AGG - Chr7:78640556-78640575 MsG0780040518.01.T01:three_prime_UTR 35.0%
! GTTTTCATCTGATATATGGC+TGG + Chr7:78636768-78636787 None:intergenic 35.0%
! TAAGTCTCATTAGTCTAGGA+CGG - Chr7:78640560-78640579 MsG0780040518.01.T01:three_prime_UTR 35.0%
! TCAGACTTTTGATGTTGATG+TGG + Chr7:78642504-78642523 None:intergenic 35.0%
! TGAATTGGTTTAGCAAGCTA+TGG + Chr7:78640532-78640551 None:intergenic 35.0%
! TGACATATGTTAGTGTTGAG+GGG + Chr7:78642532-78642551 None:intergenic 35.0%
! TTAGCTGTTTCATGTTCATG+AGG + Chr7:78637007-78637026 None:intergenic 35.0%
!! AAAGCATTGACTAACAACTC+GGG - Chr7:78643128-78643147 MsG0780040518.01.T01:CDS 35.0%
!! AGAGAGACTGATTTTTGTAG+AGG + Chr7:78637813-78637832 None:intergenic 35.0%
!! AGTATTGATTGGTTCGAAGT+TGG + Chr7:78641577-78641596 None:intergenic 35.0%
!! AGTATTTTCTAGGGGGTTTT+TGG - Chr7:78638615-78638634 MsG0780040518.01.T01:three_prime_UTR 35.0%
!! ATAATGGATTACTGTTTGGC+AGG - Chr7:78638011-78638030 MsG0780040518.01.T01:three_prime_UTR 35.0%
!! CAAAGCATTGACTAACAACT+CGG - Chr7:78643127-78643146 MsG0780040518.01.T01:CDS 35.0%
!! TCATCAATGGACTATGGTAT+TGG - Chr7:78638437-78638456 MsG0780040518.01.T01:three_prime_UTR 35.0%
!! TTCCCAAGGGGTTTTATATA+CGG + Chr7:78640059-78640078 None:intergenic 35.0%
!!! AAGAAAGATTTTTTGGCAGG+AGG + Chr7:78643385-78643404 None:intergenic 35.0%
AACCCCTTGGGAAGAAATTT+AGG - Chr7:78640066-78640085 MsG0780040518.01.T01:three_prime_UTR 40.0%
AAGCCAATAACCTCATTACG+TGG - Chr7:78642908-78642927 MsG0780040518.01.T01:intron 40.0%
AATTGTGTAGGAGAGGTTTG+GGG - Chr7:78642080-78642099 MsG0780040518.01.T01:intron 40.0%
ACAACAGACTCCTATAGCTT+TGG - Chr7:78642944-78642963 MsG0780040518.01.T01:CDS 40.0%
ACCCATTGAACCTTCTTCAT+GGG + Chr7:78640155-78640174 None:intergenic 40.0%
ACCCCTTGGGAAGAAATTTA+GGG - Chr7:78640067-78640086 MsG0780040518.01.T01:three_prime_UTR 40.0%
ACCTATATGAGTGTCAAGTG+GGG - Chr7:78640357-78640376 MsG0780040518.01.T01:three_prime_UTR 40.0%
AGAGATGATGCTGTCATCAA+TGG - Chr7:78637310-78637329 MsG0780040518.01.T01:three_prime_UTR 40.0%
AGGTTCAGAAAGCTACTTCA+TGG - Chr7:78637347-78637366 MsG0780040518.01.T01:three_prime_UTR 40.0%
ATAATGCAGGCCAAAGCTAT+AGG + Chr7:78642957-78642976 None:intergenic 40.0%
ATCCCATGAAGAAGGTTCAA+TGG - Chr7:78640150-78640169 MsG0780040518.01.T01:three_prime_UTR 40.0%
ATGAGGCGGATAAATCCTTA+AGG - Chr7:78637960-78637979 MsG0780040518.01.T01:three_prime_UTR 40.0%
ATGATGCTGTCATCAATGGA+TGG - Chr7:78637314-78637333 MsG0780040518.01.T01:three_prime_UTR 40.0%
CACCTATATGAGTGTCAAGT+GGG - Chr7:78640356-78640375 MsG0780040518.01.T01:three_prime_UTR 40.0%
CACTCGAAAACGACAAGTAA+TGG - Chr7:78640104-78640123 MsG0780040518.01.T01:three_prime_UTR 40.0%
CTTGCATACAACAAGTGTCT+TGG - Chr7:78640503-78640522 MsG0780040518.01.T01:three_prime_UTR 40.0%
CTTGTTGCGATGATCATCAA+TGG - Chr7:78638424-78638443 MsG0780040518.01.T01:three_prime_UTR 40.0%
GAATTGTGTAGGAGAGGTTT+GGG - Chr7:78642079-78642098 MsG0780040518.01.T01:intron 40.0%
GATCCGTATATAAAACCCCT+TGG - Chr7:78640053-78640072 MsG0780040518.01.T01:three_prime_UTR 40.0%
GATCTCCAATCACAAAGGTT+GGG + Chr7:78640133-78640152 None:intergenic 40.0%
GATGGAAGAAACAAACCCTT+TGG - Chr7:78637084-78637103 MsG0780040518.01.T01:three_prime_UTR 40.0%
GCTAATCTTATGAGAGCAGT+TGG - Chr7:78643355-78643374 MsG0780040518.01.T01:CDS 40.0%
GGAAGAACATGTTGTATCCT+GGG - Chr7:78637924-78637943 MsG0780040518.01.T01:three_prime_UTR 40.0%
GGCAAAAAGAGGAACTAAAG+TGG - Chr7:78643315-78643334 MsG0780040518.01.T01:CDS 40.0%
GTAGATGTAATGCATCGGAA+CGG + Chr7:78640604-78640623 None:intergenic 40.0%
GTGCTCTGATATTGCTAACA+TGG - Chr7:78638544-78638563 MsG0780040518.01.T01:three_prime_UTR 40.0%
TAAAGGGAATTGTGTAGGAG+AGG - Chr7:78642073-78642092 MsG0780040518.01.T01:intron 40.0%
TACATCTACGATGTTTACCC+AGG - Chr7:78640615-78640634 MsG0780040518.01.T01:three_prime_UTR 40.0%
TACCCATTGAACCTTCTTCA+TGG + Chr7:78640156-78640175 None:intergenic 40.0%
TATCTACCACAATCGCCAAA+GGG + Chr7:78637102-78637121 None:intergenic 40.0%
TCACCTATATGAGTGTCAAG+TGG - Chr7:78640355-78640374 MsG0780040518.01.T01:three_prime_UTR 40.0%
TCCCATGAAGAAGGTTCAAT+GGG - Chr7:78640151-78640170 MsG0780040518.01.T01:three_prime_UTR 40.0%
TCCCTAAATTTCTTCCCAAG+GGG + Chr7:78640071-78640090 None:intergenic 40.0%
TCCTACTAGCAGAAGAACTA+CGG - Chr7:78637147-78637166 MsG0780040518.01.T01:three_prime_UTR 40.0%
TGACAAAGTCACTGTCCTTA+AGG + Chr7:78637978-78637997 None:intergenic 40.0%
TGATGCTGTCATCAATGGAT+GGG - Chr7:78637315-78637334 MsG0780040518.01.T01:three_prime_UTR 40.0%
TTAGAGTACAATCAACCGCT+AGG + Chr7:78642406-78642425 None:intergenic 40.0%
TTATCTACCACAATCGCCAA+AGG + Chr7:78637103-78637122 None:intergenic 40.0%
TTCAATGCTCTTGTTCTAGC+AGG - Chr7:78636953-78636972 MsG0780040518.01.T01:three_prime_UTR 40.0%
TTCATCTGATATATGGCTGG+TGG + Chr7:78636765-78636784 None:intergenic 40.0%
TTGCCTAGCTTGAGTTACTA+TGG - Chr7:78641645-78641664 MsG0780040518.01.T01:three_prime_UTR 40.0%
TTTGAGGAGGATTAGAGAAG+AGG - Chr7:78637054-78637073 MsG0780040518.01.T01:three_prime_UTR 40.0%
! AAGTCTCATTAGTCTAGGAC+GGG - Chr7:78640561-78640580 MsG0780040518.01.T01:three_prime_UTR 40.0%
! CTACTTACTAGCTAGTTTCC+CGG + Chr7:78641798-78641817 None:intergenic 40.0%
! GATCCTCTTTTGCATTGCAT+TGG - Chr7:78642871-78642890 MsG0780040518.01.T01:intron 40.0%
! TGGTAGTGAAGAACATGTGT+CGG - Chr7:78637201-78637220 MsG0780040518.01.T01:three_prime_UTR 40.0%
!! AGACACTTGTTGTATGCAAG+AGG + Chr7:78640503-78640522 None:intergenic 40.0%
!! CGATGATCATCAATGGACTA+TGG - Chr7:78638431-78638450 MsG0780040518.01.T01:three_prime_UTR 40.0%
!!! CATTACTTGTCGTTTTCGAG+TGG + Chr7:78640106-78640125 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTTCTCCA+AGG + Chr7:78643248-78643267 None:intergenic 40.0%
AAAACCACCACCACGTAATG+AGG + Chr7:78642921-78642940 None:intergenic 45.0%
AACAAACCCTTTGGCGATTG+TGG - Chr7:78637093-78637112 MsG0780040518.01.T01:three_prime_UTR 45.0%
ACAACCATACACCACCCATA+AGG + Chr7:78640317-78640336 None:intergenic 45.0%
AGAACATGTTGTATCCTGGG+AGG - Chr7:78637927-78637946 MsG0780040518.01.T01:three_prime_UTR 45.0%
AGAGAAAAGAGCAAGAGCCT+TGG - Chr7:78643228-78643247 MsG0780040518.01.T01:CDS 45.0%
AGCCACACACATCATACAGT+GGG + Chr7:78642278-78642297 None:intergenic 45.0%
AGTACTCGTTCAAGTGGTCA+AGG - Chr7:78637178-78637197 MsG0780040518.01.T01:three_prime_UTR 45.0%
ATAACCTCATTACGTGGTGG+TGG - Chr7:78642914-78642933 MsG0780040518.01.T01:intron 45.0%
ATTGGCTATGTTTCCCGTGT+TGG + Chr7:78641995-78642014 None:intergenic 45.0%
ATTGTGTAGGAGAGGTTTGG+GGG - Chr7:78642081-78642100 MsG0780040518.01.T01:intron 45.0%
CAACCATACACCACCCATAA+GGG + Chr7:78640316-78640335 None:intergenic 45.0%
CATGGGATCTCCAATCACAA+AGG + Chr7:78640138-78640157 None:intergenic 45.0%
CCAATAACCTCATTACGTGG+TGG - Chr7:78642911-78642930 MsG0780040518.01.T01:intron 45.0%
CCACCACGTAATGAGGTTAT+TGG + Chr7:78642914-78642933 None:intergenic 45.0%
CCATGGATAGAGATGACGAA+CGG + Chr7:78636892-78636911 None:intergenic 45.0%
CGCGTAACAGCAAGAATTGT+GGG - Chr7:78640457-78640476 MsG0780040518.01.T01:three_prime_UTR 45.0%
CGTAACAGCAAGAATTGTGG+GGG - Chr7:78640459-78640478 MsG0780040518.01.T01:three_prime_UTR 45.0%
GAGACGGAACAGGATCAAAA+GGG + Chr7:78637129-78637148 None:intergenic 45.0%
GATTGGAGATCCCATGAAGA+AGG - Chr7:78640142-78640161 MsG0780040518.01.T01:three_prime_UTR 45.0%
GCGTAACAGCAAGAATTGTG+GGG - Chr7:78640458-78640477 MsG0780040518.01.T01:three_prime_UTR 45.0%
GGAATTGTGTAGGAGAGGTT+TGG - Chr7:78642078-78642097 MsG0780040518.01.T01:intron 45.0%
GGATCTCCAATCACAAAGGT+TGG + Chr7:78640134-78640153 None:intergenic 45.0%
GGGAAGAACATGTTGTATCC+TGG - Chr7:78637923-78637942 MsG0780040518.01.T01:three_prime_UTR 45.0%
GGTTGTTGAGGAACCTAACT+GGG - Chr7:78641763-78641782 MsG0780040518.01.T01:three_prime_UTR 45.0%
GTTCTTCTGCTAGTAGGAGA+CGG + Chr7:78637145-78637164 None:intergenic 45.0%
GTTGTTGAGGAACCTAACTG+GGG - Chr7:78641764-78641783 MsG0780040518.01.T01:three_prime_UTR 45.0%
TAGCCACACACATCATACAG+TGG + Chr7:78642279-78642298 None:intergenic 45.0%
TAGTGAAGAACATGTGTCGG+TGG - Chr7:78637204-78637223 MsG0780040518.01.T01:three_prime_UTR 45.0%
TCATTCTCTAACACGCTGCA+GGG - Chr7:78642247-78642266 MsG0780040518.01.T01:intron 45.0%
TGCTGATGCTTTCCTCTCTT+CGG + Chr7:78643293-78643312 None:intergenic 45.0%
TGGTTGTAGCATACGCTAGA+TGG - Chr7:78640330-78640349 MsG0780040518.01.T01:three_prime_UTR 45.0%
TGGTTGTTGAGGAACCTAAC+TGG - Chr7:78641762-78641781 MsG0780040518.01.T01:three_prime_UTR 45.0%
TTACCATAAGCCCTTATGGG+TGG - Chr7:78640303-78640322 MsG0780040518.01.T01:three_prime_UTR 45.0%
TTCACTATCTGTGCTAGCCA+TGG + Chr7:78636909-78636928 None:intergenic 45.0%
! CTAGAGCACTCATGAATACC+AGG - Chr7:78640407-78640426 MsG0780040518.01.T01:three_prime_UTR 45.0%
!! CCACAATTCTTGCTGTTACG+CGG + Chr7:78640459-78640478 None:intergenic 45.0%
!! ACAAAAAAATATATATAATT+AGG + Chr7:78638262-78638281 None:intergenic 5.0%
!! CAAAAAAATATATATAATTA+GGG + Chr7:78638261-78638280 None:intergenic 5.0%
!!! ATTATATATATTTTTTTGTT+AGG - Chr7:78638263-78638282 MsG0780040518.01.T01:three_prime_UTR 5.0%
!!! TTATATATATTTTTTTGTTA+GGG - Chr7:78638264-78638283 MsG0780040518.01.T01:three_prime_UTR 5.0%
AAGCCCTTATGGGTGGTGTA+TGG - Chr7:78640310-78640329 MsG0780040518.01.T01:three_prime_UTR 50.0%
ACACCACCCATAAGGGCTTA+TGG + Chr7:78640309-78640328 None:intergenic 50.0%
ACTAGCAGAAGAACTACGGC+TGG - Chr7:78637151-78637170 MsG0780040518.01.T01:three_prime_UTR 50.0%
ACTCGTTCAAGTGGTCAAGG+TGG - Chr7:78637181-78637200 MsG0780040518.01.T01:three_prime_UTR 50.0%
AGGAACCTAACTGGGGTGTA+GGG - Chr7:78641771-78641790 MsG0780040518.01.T01:three_prime_UTR 50.0%
ATGAATACCAGGCATGCGCA+CGG - Chr7:78640418-78640437 MsG0780040518.01.T01:three_prime_UTR 50.0%
CAATGGATGGGAGAGTGAAC+AGG - Chr7:78637327-78637346 MsG0780040518.01.T01:three_prime_UTR 50.0%
CCGCGTAACAGCAAGAATTG+TGG - Chr7:78640456-78640475 MsG0780040518.01.T01:three_prime_UTR 50.0%
CCGTTCGTCATCTCTATCCA+TGG - Chr7:78636889-78636908 MsG0780040518.01.T01:three_prime_UTR 50.0%
CTCATTCTCTAACACGCTGC+AGG - Chr7:78642246-78642265 MsG0780040518.01.T01:intron 50.0%
CTCGAAGAAAAGCCGAAGAG+AGG - Chr7:78643278-78643297 MsG0780040518.01.T01:CDS 50.0%
GACCCACTGTATGATGTGTG+TGG - Chr7:78642273-78642292 MsG0780040518.01.T01:intron 50.0%
GAGGATATGCGCTTATGAGG+CGG - Chr7:78637946-78637965 MsG0780040518.01.T01:three_prime_UTR 50.0%
GCATCAGCAGAGGCAAAAAG+AGG - Chr7:78643304-78643323 MsG0780040518.01.T01:CDS 50.0%
GCCCCACTTGACACTCATAT+AGG + Chr7:78640361-78640380 None:intergenic 50.0%
GCCGTAGTTCTTCTGCTAGT+AGG + Chr7:78637151-78637170 None:intergenic 50.0%
GGAGACGGAACAGGATCAAA+AGG + Chr7:78637130-78637149 None:intergenic 50.0%
GGGAACCCAACCTTTGTGAT+TGG - Chr7:78640125-78640144 MsG0780040518.01.T01:three_prime_UTR 50.0%
GTCGGTGGATAGAGTGAAGA+AGG - Chr7:78637219-78637238 MsG0780040518.01.T01:three_prime_UTR 50.0%
TCATAAGCGCATATCCTCCC+AGG + Chr7:78637944-78637963 None:intergenic 50.0%
TGGATAGAGATGACGAACGG+TGG + Chr7:78636889-78636908 None:intergenic 50.0%
TGGCAGGTTATCTCCTTCCA+TGG - Chr7:78638027-78638046 MsG0780040518.01.T01:three_prime_UTR 50.0%
TGGGAGGATATGCGCTTATG+AGG - Chr7:78637943-78637962 MsG0780040518.01.T01:three_prime_UTR 50.0%
TGTTTCCTTACTCGGCCTAG+CGG - Chr7:78642388-78642407 MsG0780040518.01.T01:intron 50.0%
TTACGCGGTTGTGCGCTAAT+AGG + Chr7:78640444-78640463 None:intergenic 50.0%
! GTCGAGGTGGTGTTAAAGCA+TGG + Chr7:78636826-78636845 None:intergenic 50.0%
!! AGAGAGGAAAGCATCAGCAG+AGG - Chr7:78643294-78643313 MsG0780040518.01.T01:CDS 50.0%
!! GGACCCCTTTTTGCTGTCAT+TGG + Chr7:78643011-78643030 None:intergenic 50.0%
!! GGTGGAAGTACTCGTTCAAG+TGG - Chr7:78637172-78637191 MsG0780040518.01.T01:three_prime_UTR 50.0%
AGCAGAAGAACTACGGCTGG+TGG - Chr7:78637154-78637173 MsG0780040518.01.T01:three_prime_UTR 55.0%
ATCAACCGCTAGGCCGAGTA+AGG + Chr7:78642396-78642415 None:intergenic 55.0%
CGGAACGGTGTAGCAAGCTA+TGG + Chr7:78640589-78640608 None:intergenic 55.0%
CTCTAACAATCTGCGCGTCC+TGG - Chr7:78642420-78642439 MsG0780040518.01.T01:intron 55.0%
CTGCTAGTAGGAGACGGAAC+AGG + Chr7:78637139-78637158 None:intergenic 55.0%
GAGATGACGAACGGTGGCTA+TGG + Chr7:78636883-78636902 None:intergenic 55.0%
GAGGAACCTAACTGGGGTGT+AGG - Chr7:78641770-78641789 MsG0780040518.01.T01:three_prime_UTR 55.0%
GGAACCTAACTGGGGTGTAG+GGG - Chr7:78641772-78641791 MsG0780040518.01.T01:three_prime_UTR 55.0%
TCTCTAACACGCTGCAGGGA+CGG - Chr7:78642251-78642270 MsG0780040518.01.T01:intron 55.0%
!! TTTGTTGGTGGTGGAGGAGG+TGG + Chr7:78636851-78636870 None:intergenic 55.0%
CCACCACCAACAAACCGTGG+CGG - Chr7:78636857-78636876 MsG0780040518.01.T01:three_prime_UTR 60.0%
CCTCCACCACCAACAAACCG+TGG - Chr7:78636854-78636873 MsG0780040518.01.T01:three_prime_UTR 60.0%
CTATGGCCGCCACGGTTTGT+TGG + Chr7:78636866-78636885 None:intergenic 60.0%
TAATAGGCCGTGCGCATGCC+TGG + Chr7:78640428-78640447 None:intergenic 60.0%
!! AGTGCTCTAGAGACCCGCCA+CGG + Chr7:78640397-78640416 None:intergenic 60.0%
!! CCACGGTTTGTTGGTGGTGG+AGG + Chr7:78636857-78636876 None:intergenic 60.0%
!! CGGTTTGTTGGTGGTGGAGG+AGG + Chr7:78636854-78636873 None:intergenic 60.0%
AACGGTGGCTATGGCCGCCA+CGG + Chr7:78636874-78636893 None:intergenic 65.0%
CCGCCACGGTCTCATGCAAG+CGG + Chr7:78640383-78640402 None:intergenic 65.0%
CCGCTTGCATGAGACCGTGG+CGG - Chr7:78640380-78640399 MsG0780040518.01.T01:three_prime_UTR 65.0%
CCTAACTGGGGTGTAGGGGC+CGG - Chr7:78641776-78641795 MsG0780040518.01.T01:three_prime_UTR 65.0%
CGCTTGCATGAGACCGTGGC+GGG - Chr7:78640381-78640400 MsG0780040518.01.T01:three_prime_UTR 65.0%
CTAACTGGGGTGTAGGGGCC+GGG - Chr7:78641777-78641796 MsG0780040518.01.T01:three_prime_UTR 65.0%
GGAGGAGGTGGAAGTCGAGG+TGG + Chr7:78636839-78636858 None:intergenic 65.0%
GGTGGAGGAGGTGGAAGTCG+AGG + Chr7:78636842-78636861 None:intergenic 65.0%
!! CCGCCACGGTTTGTTGGTGG+TGG + Chr7:78636860-78636879 None:intergenic 65.0%
!! TGGCCGCCACGGTTTGTTGG+TGG + Chr7:78636863-78636882 None:intergenic 65.0%
CCGGCCCCTACACCCCAGTT+AGG + Chr7:78641779-78641798 None:intergenic 70.0%
GGGCCGCTTGCATGAGACCG+TGG - Chr7:78640377-78640396 MsG0780040518.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78636737 78643601 78636737 ID=MsG0780040518.01;Name=MsG0780040518.01
Chr7 mRNA 78636737 78643601 78636737 ID=MsG0780040518.01.T01;Parent=MsG0780040518.01;Name=MsG0780040518.01.T01;_AED=0.12;_eAED=0.13;_QI=0|0|0.33|1|1|1|3|5265|260
Chr7 exon 78636737 78642053 78636737 ID=MsG0780040518.01.T01:exon:417;Parent=MsG0780040518.01.T01
Chr7 exon 78642749 78642802 78642749 ID=MsG0780040518.01.T01:exon:416;Parent=MsG0780040518.01.T01
Chr7 exon 78642925 78643601 78642925 ID=MsG0780040518.01.T01:exon:415;Parent=MsG0780040518.01.T01
Chr7 CDS 78642925 78643601 78642925 ID=MsG0780040518.01.T01:cds;Parent=MsG0780040518.01.T01
Chr7 CDS 78642749 78642802 78642749 ID=MsG0780040518.01.T01:cds;Parent=MsG0780040518.01.T01
Chr7 CDS 78642002 78642053 78642002 ID=MsG0780040518.01.T01:cds;Parent=MsG0780040518.01.T01
Chr7 three_prime_UTR 78636737 78642001 78636737 ID=MsG0780040518.01.T01:three_prime_utr;Parent=MsG0780040518.01.T01
Gene Sequence

>MsG0780040518.01.T01

ATGTTGAATAATAATCTAAATACTTCCACCAGCCATATATCAGATGAAAACCAAGAAGATGAACAAATAACAGAAATAAGAGAAATCCATGCTTTAACACCACCTCGACTTCCACCTCCTCCACCACCAACAAACCGTGGCGGCCATAGCCACCGTTCGTCATCTCTATCCATGGCTAGCACAGATAGTGAAAACTTCACAACTATAAGCAGAGAATTCAATGCTCTTGTTCTAGCAGGATCAACTGTTGACCCTAACAACATAAGTCCTCATGAACATGAAACAGCTAACAGTAACAATAACAATAACAATAACAATTTGAGGAGGATTAGAGAAGAGGATCATATGATGGAAGAAACAAACCCTTTGGCGATTGTGGTAGATAACAACCCTTTTGATCCTGTTCCGTCTCCTACTAGCAGAAGAACTACGGCTGGTGGAAGTACTCGTTCAAGTGGTCAAGGTGGTAGTGAAGAACATGTGTCGGTGGATAGAGTGAAGAAGGAAGAAGTTGATGCAAAGATATCAGCTTGGCAGAATGCTAAAGTTGCTAAAATTAACAACAGGTTCAAGAGAGATGATGCTGTCATCAATGGATGGGAGAGTGAACAGGTTCAGAAAGCTACTTCATGGATGAAGAAAGTTGAGGTAAGTGTTTTTTCTTCTTCTTTCTCACGGCCACATCATTTTGACTTGACTAAGTCTAAACATTTATTCTCTCTTTTAAAACGGGATTTGGGTATTGTTATGTCTAAGGAATGGACTGTCAATTATGAGAAATGA
Protein sequence

>MsG0780040518.01.T01

MLNNNLNTSTSHISDENQEDEQITEIREIHALTPPRLPPPPPPTNRGGHSHRSSSLSMASTDSENFTTISREFNALVLAGSTVDPNNISPHEHETANSNNNNNNNNLRRIREEDHMMEETNPLAIVVDNNPFDPVPSPTSRRTTAGGSTRSSGQGGSEEHVSVDRVKKEEVDAKISAWQNAKVAKINNRFKRDDAVINGWESEQVQKATSWMKKVEVSVFSSSFSRPHHFDLTKSKHLFSLLKRDLGIVMSKEWTVNYEK*