AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010807.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010807.01.T01 MTR_2g091015 91.609 870 63 4 2 863 1 868 0.0 1486
MsG0280010807.01.T01 MTR_2g091280 61.898 748 210 8 2 703 1 719 0.0 724
MsG0280010807.01.T01 MTR_2g093010 45.089 896 382 15 1 863 1 819 0.0 563
MsG0280010807.01.T01 MTR_2g093010 45.118 891 380 14 6 863 4 818 0.0 562
MsG0280010807.01.T01 MTR_7g056313 78.426 394 60 2 2 395 1 369 0.0 543
MsG0280010807.01.T01 MTR_7g056313 46.835 237 82 4 300 532 173 369 8.42e-36 140
MsG0280010807.01.T01 MTR_7g056313 50.510 196 96 1 422 616 174 369 2.78e-35 138
MsG0280010807.01.T01 MTR_7g056313 38.194 288 138 7 404 682 113 369 5.26e-28 117
MsG0280010807.01.T01 MTR_7g056313 35.124 242 116 7 486 698 114 343 3.82e-15 78.6
MsG0280010807.01.T01 MTR_2g091250 51.719 727 267 11 210 863 476 1191 1.17e-178 550
MsG0280010807.01.T01 MTR_2g091250 42.327 808 326 17 8 716 19 785 3.32e-132 427
MsG0280010807.01.T01 MTR_2g091110 48.652 779 316 14 132 863 457 1198 3.54e-158 496
MsG0280010807.01.T01 MTR_2g091110 42.657 715 322 11 68 702 42 748 8.49e-114 377
MsG0280010807.01.T01 MTR_2g091110 43.192 639 251 12 148 696 280 896 2.65e-97 332
MsG0280010807.01.T01 MTR_2g091110 43.344 616 245 11 149 698 349 926 1.46e-93 321
MsG0280010807.01.T01 MTR_2g091080 41.383 882 326 19 38 866 18 761 6.89e-148 454
MsG0280010807.01.T01 MTR_2g091335 57.303 445 169 6 5 436 3 439 2.06e-142 435
MsG0280010807.01.T01 MTR_2g091335 56.557 488 151 12 393 866 167 607 5.07e-135 416
MsG0280010807.01.T01 MTR_2g091325 49.728 551 224 8 2 503 1 547 1.47e-139 427
MsG0280010807.01.T01 MTR_2g091325 47.368 456 139 10 314 719 167 571 3.07e-85 284
MsG0280010807.01.T01 MTR_3g110385 41.104 815 342 15 68 863 34 729 1.23e-129 409
MsG0280010807.01.T01 MTR_2g091285 57.568 403 150 4 2 384 1 402 2.31e-123 385
MsG0280010807.01.T01 MTR_2g091285 52.000 475 162 12 413 864 159 590 2.03e-116 367
MsG0280010807.01.T01 MTR_2g091285 39.326 267 130 8 232 474 153 411 2.65e-22 102
MsG0280010807.01.T01 MTR_2g091260 49.825 572 213 12 343 863 225 773 5.53e-120 385
MsG0280010807.01.T01 MTR_2g091260 38.916 609 246 15 6 504 4 596 4.36e-73 258
MsG0280010807.01.T01 MTR_2g091260 30.400 250 145 5 133 357 368 613 4.29e-12 70.5
MsG0280010807.01.T01 MTR_5g078510 52.796 447 155 7 466 863 3 442 1.62e-118 371
MsG0280010807.01.T01 MTR_5g078510 44.713 331 150 4 243 570 1 301 4.41e-47 177
MsG0280010807.01.T01 MTR_5g078510 41.083 314 148 5 199 511 2 279 1.66e-28 121
MsG0280010807.01.T01 MTR_5g078510 38.870 301 143 9 148 448 3 262 6.35e-22 101
MsG0280010807.01.T01 MTR_5g078510 33.808 281 141 10 102 366 20 271 2.07e-13 74.3
MsG0280010807.01.T01 MTR_2g091315 46.745 599 193 14 6 521 4 559 1.97e-116 366
MsG0280010807.01.T01 MTR_2g091315 37.971 345 175 10 372 698 193 516 8.43e-29 122
MsG0280010807.01.T01 MTR_2g091315 43.258 178 91 2 525 702 278 445 2.42e-14 77.4
MsG0280010807.01.T01 MTR_2g091030 54.783 460 160 10 413 863 168 588 3.52e-115 363
MsG0280010807.01.T01 MTR_2g091030 55.882 408 136 7 6 378 4 402 1.39e-102 330
MsG0280010807.01.T01 MTR_2g010420 36.706 850 390 19 23 863 27 737 4.25e-115 371
MsG0280010807.01.T01 MTR_2g010420 46.139 518 235 9 373 866 243 740 2.98e-109 352
MsG0280010807.01.T01 MTR_2g010420 34.811 609 309 12 23 604 27 574 8.09e-62 223
MsG0280010807.01.T01 MTR_2g010420 38.828 273 149 2 448 702 236 508 5.53e-33 137
MsG0280010807.01.T01 MTR_2g091290 41.531 614 307 15 281 863 142 734 1.24e-104 342
MsG0280010807.01.T01 MTR_2g091290 40.370 540 253 9 54 548 53 568 1.04e-77 269
MsG0280010807.01.T01 MTR_2g091290 30.345 580 320 13 96 635 23 558 2.89e-31 132
MsG0280010807.01.T01 MTR_6g045183 50.644 466 202 7 422 863 203 664 4.62e-104 340
MsG0280010807.01.T01 MTR_6g045183 37.649 502 223 13 1 431 1 483 2.45e-59 216
MsG0280010807.01.T01 MTR_2g091105 56.136 383 129 9 497 865 229 586 1.59e-95 315
MsG0280010807.01.T01 MTR_2g091105 44.820 444 179 11 6 419 4 411 1.86e-78 268
MsG0280010807.01.T01 MTR_2g091105 34.191 272 168 4 314 582 146 409 9.88e-19 91.7
MsG0280010807.01.T01 MTR_2g091240 54.427 384 138 7 494 863 127 487 3.49e-92 303
MsG0280010807.01.T01 MTR_2g091240 35.075 268 140 4 146 409 73 310 1.33e-23 106
MsG0280010807.01.T01 MTR_2g091240 32.410 361 166 9 54 413 44 327 1.85e-21 100
MsG0280010807.01.T01 MTR_2g091240 38.996 259 103 7 207 447 78 299 2.19e-19 93.6
MsG0280010807.01.T01 MTR_2g091240 39.189 222 73 7 318 532 144 310 1.26e-13 75.1
MsG0280010807.01.T01 MTR_2g091240 33.161 193 85 2 393 573 149 309 5.04e-12 70.1
MsG0280010807.01.T01 MTR_2g091370 45.701 442 164 8 490 865 307 738 1.53e-91 308
MsG0280010807.01.T01 MTR_2g091370 37.778 585 261 10 8 507 6 572 8.10e-71 251
MsG0280010807.01.T01 MTR_2g091025 48.214 392 173 6 495 863 131 515 9.30e-89 293
MsG0280010807.01.T01 MTR_2g091025 40.092 217 110 3 228 442 126 324 1.84e-26 115
MsG0280010807.01.T01 MTR_2g091025 40.206 194 103 2 222 413 150 332 1.13e-21 100
MsG0280010807.01.T01 MTR_2g091245 51.654 393 128 8 485 863 214 558 2.49e-86 289
MsG0280010807.01.T01 MTR_2g091245 36.910 466 252 8 34 485 4 441 4.51e-55 202
MsG0280010807.01.T01 MTR_2g091010 39.213 635 231 17 4 532 2 587 9.23e-85 287
MsG0280010807.01.T01 MTR_2g091010 35.676 555 247 14 232 755 165 640 1.25e-53 199
MsG0280010807.01.T01 MTR_5g038810 48.731 394 157 9 484 863 120 482 6.73e-84 283
MsG0280010807.01.T01 MTR_5g038810 50.313 320 130 3 54 363 21 321 1.46e-71 249
MsG0280010807.01.T01 MTR_5g038810 55.414 157 66 1 424 580 165 317 1.83e-36 147
MsG0280010807.01.T01 MTR_5g038810 35.918 245 89 7 270 475 109 324 2.27e-18 90.5
MsG0280010807.01.T01 MTR_2g091330 39.369 602 248 14 6 504 4 591 1.07e-77 265
MsG0280010807.01.T01 MTR_2g091330 38.344 459 222 11 265 696 167 591 1.90e-51 191
MsG0280010807.01.T01 MTR_2g091330 44.601 213 108 1 490 702 262 464 1.44e-27 119
MsG0280010807.01.T01 MTR_2g103620 48.493 365 107 10 508 866 92 381 2.27e-74 248
MsG0280010807.01.T01 MTR_2g103620 36.364 286 97 7 54 324 8 223 5.37e-21 96.7
MsG0280010807.01.T01 MTR_2g091090 48.930 374 146 7 495 858 201 539 2.87e-74 256
MsG0280010807.01.T01 MTR_2g091090 40.976 410 185 11 1 399 1 364 5.40e-51 191
MsG0280010807.01.T01 MTR_2g091090 36.598 194 119 1 448 637 188 381 9.18e-20 95.1
MsG0280010807.01.T01 MTR_2g090980 58.577 239 87 3 627 863 288 516 9.73e-74 252
MsG0280010807.01.T01 MTR_2g103640 48.696 345 116 10 496 836 66 353 4.61e-66 225
MsG0280010807.01.T01 MTR_2g103640 34.884 301 132 7 58 357 2 239 2.10e-23 103
MsG0280010807.01.T01 MTR_2g104190 46.779 357 143 8 508 862 296 607 2.25e-65 231
MsG0280010807.01.T01 MTR_2g104190 39.506 405 170 9 23 389 82 449 3.49e-50 187
MsG0280010807.01.T01 MTR_2g091005 38.760 516 255 12 8 478 6 505 2.84e-64 227
MsG0280010807.01.T01 MTR_2g091005 34.058 414 224 11 314 704 138 525 1.37e-28 122
MsG0280010807.01.T01 MTR_2g090640 46.814 361 129 7 171 495 100 433 1.07e-58 210
MsG0280010807.01.T01 MTR_2g090640 40.056 357 155 6 369 683 106 445 1.53e-42 164
MsG0280010807.01.T01 MTR_2g090640 36.119 371 179 8 431 754 126 485 2.60e-35 142
MsG0280010807.01.T01 MTR_2g090640 34.564 298 123 8 118 414 207 433 6.44e-19 91.7
MsG0280010807.01.T01 MTR_2g090640 33.542 319 149 8 125 397 147 448 3.61e-17 86.3
MsG0280010807.01.T01 MTR_2g091040 40.976 410 185 11 1 399 1 364 4.81e-52 191
MsG0280010807.01.T01 MTR_2g091040 44.574 258 100 5 495 744 201 423 4.79e-34 138
MsG0280010807.01.T01 MTR_2g091040 36.598 194 119 1 448 637 188 381 1.33e-19 94.0
MsG0280010807.01.T01 MTR_5g078500 38.968 349 157 12 2 339 1 304 3.28e-44 162
MsG0280010807.01.T01 MTR_5g078500 36.154 130 79 1 487 616 179 304 8.99e-11 64.3
MsG0280010807.01.T01 MTR_2g091070 61.905 147 46 3 727 863 2 148 8.99e-38 140
MsG0280010807.01.T01 MTR_8g107320 44.292 219 79 7 649 866 36 212 7.28e-36 135
MsG0280010807.01.T01 MTR_2g091360 60.769 130 43 2 482 607 30 155 1.13e-32 129
MsG0280010807.01.T01 MTR_2g091360 56.296 135 59 0 197 331 22 156 1.99e-32 129
MsG0280010807.01.T01 MTR_2g091360 42.759 145 82 1 422 565 25 169 3.75e-19 90.1
MsG0280010807.01.T01 MTR_2g091360 42.553 141 72 3 514 650 21 156 2.52e-17 84.7
MsG0280010807.01.T01 MTR_2g091360 44.056 143 70 2 298 430 35 177 2.33e-15 78.6
MsG0280010807.01.T01 MTR_2g091360 38.158 152 86 3 372 523 26 169 1.25e-12 70.5
MsG0280010807.01.T01 MTR_4g046660 34.902 510 255 17 420 863 78 576 6.14e-32 134
MsG0280010807.01.T01 MTR_7g056317 89.535 86 9 0 781 866 1 86 7.20e-31 117
MsG0280010807.01.T01 MTR_8g467200 39.373 287 143 11 592 863 32 302 2.84e-29 123
MsG0280010807.01.T01 MTR_4g084920 35.461 282 164 6 535 802 17 294 7.81e-27 112
MsG0280010807.01.T01 MTR_4g084920 30.942 223 117 7 116 305 3 221 2.43e-14 75.5
MsG0280010807.01.T01 MTR_8g106540 28.617 311 168 9 555 863 26 284 5.14e-22 97.8
MsG0280010807.01.T01 MTR_8g106540 43.689 103 47 2 502 604 29 120 7.22e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010807.01.T01 AT5G27220 27.979 747 439 30 182 860 85 800 1.59e-15 82.0
MsG0280010807.01.T01 AT5G27220 27.979 747 439 30 182 860 85 800 1.59e-15 82.0
MsG0280010807.01.T01 AT5G27220 27.979 747 439 30 182 860 85 800 2.67e-15 81.3
MsG0280010807.01.T01 AT5G27220 27.979 747 439 30 182 860 85 800 2.67e-15 81.3

Find 162 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTCAATATCTTTCTTTA+TGG 0.078584 2:-75303365 None:intergenic
TCGTTACACCGTGGAATAAT+TGG 0.186276 2:-75305698 None:intergenic
AAAATAAGAGAAAGGAAATT+AGG 0.204823 2:+75303404 MsG0280010807.01.T01:CDS
TCGACTCAAGCTCCTTAATA+TGG 0.246214 2:-75303678 None:intergenic
AGATCCAGCAAAAGTTGTTT+TGG 0.284507 2:+75305661 MsG0280010807.01.T01:CDS
GCATTTCGAAAGCCATATTA+AGG 0.298255 2:+75303666 MsG0280010807.01.T01:CDS
ATTCAGTTGCTTCTCTTTAG+AGG 0.311695 2:-75303863 None:intergenic
TTGATTTAAACCCCTTCATT+TGG 0.326386 2:-75304098 None:intergenic
TCAATACCATTTCCTTCAAT+TGG 0.340155 2:-75304140 None:intergenic
GGAAGGGCAGCTCGGTTTGA+TGG 0.363511 2:+75303504 MsG0280010807.01.T01:CDS
CATTTCAAAACAAAAGGAAT+TGG 0.366413 2:+75303597 MsG0280010807.01.T01:CDS
TTTCGATGAAGATGAAATCT+TGG 0.373847 2:+75305922 MsG0280010807.01.T01:CDS
CAATTAAGTCCAACCATTGA+TGG 0.384832 2:+75305575 MsG0280010807.01.T01:CDS
AAATAAGAGAAAGGAAATTA+GGG 0.395303 2:+75303405 MsG0280010807.01.T01:CDS
CTTACACCAGGTTTAATCTT+CGG 0.400167 2:-75305785 None:intergenic
GAAAATTCTCTGGTGGTTCT+CGG 0.400209 2:+75305860 MsG0280010807.01.T01:CDS
TTGACTCAAGCTCCTTGATT+CGG 0.400367 2:-75303930 None:intergenic
AGAAAGGAAATTAGGGATGT+TGG 0.404853 2:+75303412 MsG0280010807.01.T01:CDS
CTGATTCATGCTCCTTCAAT+CGG 0.411065 2:-75303720 None:intergenic
TGAAGGCCAATTGAAGGAAA+TGG 0.415380 2:+75304134 MsG0280010807.01.T01:CDS
TCCTTAACTTGTCCTTTCAA+TGG 0.416406 2:-75303835 None:intergenic
CAACTACACTGCCAGTTAAG+AGG 0.420637 2:+75303128 MsG0280010807.01.T01:CDS
CGTTACACCGTGGAATAATT+GGG 0.423380 2:-75305697 None:intergenic
CTGCAAACTTGTTCCATCAA+TGG 0.424369 2:-75305588 None:intergenic
TCATCGAATACCCTCTTAAC+TGG 0.425935 2:-75303139 None:intergenic
GGTTTGATGGAGGACTTGAT+TGG 0.427923 2:+75303517 MsG0280010807.01.T01:CDS
TAGATTGCTGCTCCATCACT+TGG 0.430217 2:-75304014 None:intergenic
TGTGGAACTGTTTCAGACCC+TGG 0.436519 2:+75305979 MsG0280010807.01.T01:CDS
GTGGAACTGTTTCAGACCCT+GGG 0.436738 2:+75305980 MsG0280010807.01.T01:CDS
TCTAAAGAGAAGCAACTTGA+TGG 0.439668 2:+75304528 MsG0280010807.01.T01:CDS
TTGTATGAAGCTCGCTCGCT+TGG 0.445057 2:-75304341 None:intergenic
CATTCACCAGCTCCTTCACT+TGG 0.445431 2:-75303624 None:intergenic
TTGATTCATGCTCCTTCACC+CGG 0.446148 2:-75303972 None:intergenic
GCCATTGAAAGGACAAGTTA+AGG 0.449900 2:+75303834 MsG0280010807.01.T01:CDS
AATCCAAGTCAAGGCGTTAG+AGG 0.450781 2:+75304053 MsG0280010807.01.T01:CDS
GGAATTCAAAGTACACTTGA+AGG 0.453258 2:+75304707 MsG0280010807.01.T01:CDS
GCAACATGAGGGCCGGGTGA+TGG 0.456158 2:+75304371 MsG0280010807.01.T01:CDS
TAGATTCCAGCTCCTTCACT+TGG 0.457595 2:-75303888 None:intergenic
TTTAAATGGCTAGCATCATT+CGG 0.458824 2:+75303028 MsG0280010807.01.T01:CDS
TTGACTCAAGATCCATCATT+CGG 0.459180 2:-75304182 None:intergenic
TTGATTTAAGCTCCTCCACT+TGG 0.460493 2:-75304467 None:intergenic
AGAGAATAAGTTCAAAGTAC+TGG 0.461562 2:+75304911 MsG0280010807.01.T01:CDS
AGAATTTGAAGGTAAAATGA+TGG 0.461821 2:+75304413 MsG0280010807.01.T01:CDS
GGATAACATTTCAAAACAAA+AGG 0.461832 2:+75303591 MsG0280010807.01.T01:CDS
TTGATTTGAAGTCCTCAACT+TGG 0.471741 2:-75304803 None:intergenic
TCAAAGCTGGATGAATTTGA+TGG 0.475303 2:+75304978 MsG0280010807.01.T01:CDS
CAAGGATCCTGGTTCAAAGC+TGG 0.476074 2:+75304965 MsG0280010807.01.T01:CDS
TCATCGTCATAATCATCATA+TGG 0.476502 2:-75303211 None:intergenic
TTGCCTCTAACGCCTTGACT+TGG 0.477996 2:-75304056 None:intergenic
GAAGGAGCTGGTGAATGATT+TGG 0.478296 2:+75303630 MsG0280010807.01.T01:CDS
TCATCACCAACACAAAACTT+TGG 0.480289 2:-75302986 None:intergenic
GGAATTTGAAGGCCAATTGA+AGG 0.481369 2:+75304128 MsG0280010807.01.T01:CDS
GCAGCATGAAGGCCGGGTGA+AGG 0.482203 2:+75303960 MsG0280010807.01.T01:CDS
CACAAGTTCTTCTTTGAGTG+TGG 0.483252 2:-75303278 None:intergenic
CAGATTCGAGCTCCTTCGCC+CGG 0.486316 2:-75304593 None:intergenic
CCTTCATTTGGTCTACAAGT+TGG 0.492877 2:-75304086 None:intergenic
AGAATGACAGTTTCATCACT+TGG 0.496443 2:-75305617 None:intergenic
TTGATTTGTATTCCTCGACT+TGG 0.497249 2:-75304845 None:intergenic
GCAATATGAAGAACAAATGA+AGG 0.497383 2:+75304665 MsG0280010807.01.T01:CDS
GCATTTCAAAAGCGAGGTGG+AGG 0.500038 2:+75303792 MsG0280010807.01.T01:CDS
GGAAATGGTATTGAATCAAA+AGG 0.501363 2:+75304149 MsG0280010807.01.T01:CDS
TTGAAAGAGAAGGAATTTGA+AGG 0.502001 2:+75304222 MsG0280010807.01.T01:CDS
GTGTTTCGAGCTGCTTCTGT+CGG 0.502608 2:-75304635 None:intergenic
TTGATTCATGCTCCATCACC+CGG 0.503709 2:-75304383 None:intergenic
GCAGCTTGAAGGCCGATTGA+AGG 0.506976 2:+75303708 MsG0280010807.01.T01:CDS
TGAAGGCCGACTGAAGGATC+TGG 0.507816 2:+75304281 MsG0280010807.01.T01:CDS
TCGAAAGAGAGGCAGCTTGA+AGG 0.508935 2:+75303697 MsG0280010807.01.T01:CDS
TGAATTTGATGGACAATTGA+AGG 0.510307 2:+75304989 MsG0280010807.01.T01:CDS
GTCCATAAAGAAAGATATTG+AGG 0.511370 2:+75303363 MsG0280010807.01.T01:CDS
GATTAAACCTGGTGTAAGAA+AGG 0.512752 2:+75305790 MsG0280010807.01.T01:CDS
TCAAAAGAGGATGAATTTGA+AGG 0.513855 2:+75304570 MsG0280010807.01.T01:CDS
GGAGCATGAATTGAAAGAGA+AGG 0.517745 2:+75304212 MsG0280010807.01.T01:CDS
GAAGGACAAATCAAGGATCC+TGG 0.517942 2:+75304954 MsG0280010807.01.T01:CDS
GGGGTTTAAATCAAAAGAGA+TGG 0.521802 2:+75304107 MsG0280010807.01.T01:CDS
GGAGACCATTCTGTAATTGA+TGG 0.521988 2:+75305722 MsG0280010807.01.T01:CDS
AAGAGGATGAATTTGAAGGC+CGG 0.522435 2:+75304574 MsG0280010807.01.T01:CDS
AAGAGAAGCAACATGAGGGC+CGG 0.522529 2:+75304364 MsG0280010807.01.T01:CDS
CGAAGCTCGCAAGAAAATGC+AGG 0.523237 2:+75303444 MsG0280010807.01.T01:CDS
GTTAAAAGAAGGACAAATCA+AGG 0.525655 2:+75304947 MsG0280010807.01.T01:CDS
GGGATTTGAAGGCCGACTGA+AGG 0.526976 2:+75304275 MsG0280010807.01.T01:CDS
AAAGAGCTCAAGTTAAAAGA+AGG 0.528411 2:+75304936 MsG0280010807.01.T01:CDS
AGAACTAAAGACAAAAGAGT+TGG 0.528840 2:+75303552 MsG0280010807.01.T01:CDS
AAGAGAAGCAGCATGAAGGC+CGG 0.529945 2:+75303953 MsG0280010807.01.T01:CDS
TCAAAAGAGATGGAATTTGA+AGG 0.530390 2:+75304117 MsG0280010807.01.T01:CDS
ACAAAATTGATGCCATTGAA+AGG 0.531067 2:+75303823 MsG0280010807.01.T01:CDS
AGAGGATGAATTTGAAGGCC+GGG 0.533463 2:+75304575 MsG0280010807.01.T01:CDS
CAGCAAGGTTTCATAAGAAG+AGG 0.534182 2:+75303101 MsG0280010807.01.T01:CDS
AATGCTTCCTTTCTTACACC+AGG 0.534337 2:-75305797 None:intergenic
CCAACTTGTAGACCAAATGA+AGG 0.538367 2:+75304086 MsG0280010807.01.T01:CDS
AAAGTTTATTTGCAAAACCC+AGG 0.539415 2:-75305997 None:intergenic
TCTAAAGAGAAGCAACTGAA+TGG 0.542089 2:+75303865 MsG0280010807.01.T01:CDS
AGATCTTGAAAATAAGAGAA+AGG 0.543045 2:+75303396 MsG0280010807.01.T01:CDS
AGAGAAGCAACATGAGGGCC+GGG 0.544891 2:+75304365 MsG0280010807.01.T01:CDS
TCATAATCATCATATGGTGT+TGG 0.544931 2:-75303205 None:intergenic
TCAAAAGTGAGAGAATTTGA+AGG 0.545064 2:+75304402 MsG0280010807.01.T01:CDS
GATGACAACAATTCCTTGTG+TGG 0.545290 2:+75303157 MsG0280010807.01.T01:CDS
TGAATTTGAAGGCCGGGCGA+AGG 0.546048 2:+75304581 MsG0280010807.01.T01:CDS
AGAATTTGAAAGCCAAGTGA+TGG 0.547092 2:+75304002 MsG0280010807.01.T01:CDS
AGGAGCTTAAATCAAAAGAA+AGG 0.552319 2:+75304475 MsG0280010807.01.T01:CDS
GAAGGAGTTAAAGTCAAAAG+AGG 0.553476 2:+75304557 MsG0280010807.01.T01:CDS
GAATGGCCAAGTGAAGGAGC+TGG 0.554411 2:+75303882 MsG0280010807.01.T01:CDS
AGAGAAGCAGCATGAAGGCC+GGG 0.557189 2:+75303954 MsG0280010807.01.T01:CDS
AATTCATCCAGCTTTGAACC+AGG 0.560711 2:-75304972 None:intergenic
TTGAATGATGGACGTTGTTG+AGG 0.562716 2:+75302952 None:intergenic
ACAGTTTGAGAACCGAATCA+AGG 0.562808 2:+75303918 MsG0280010807.01.T01:CDS
AACTACACTGCCAGTTAAGA+GGG 0.568794 2:+75303129 MsG0280010807.01.T01:CDS
TCAAAAGAGAAGCAGCATGA+AGG 0.569518 2:+75303949 MsG0280010807.01.T01:CDS
GCAACTTGATGGCCGACTGA+AGG 0.570324 2:+75304539 MsG0280010807.01.T01:CDS
GGAGTTGCAGTCAAAAGAAG+AGG 0.570613 2:+75304686 MsG0280010807.01.T01:CDS
GTTGGAACTTCGTCAAGTCA+TGG 0.572370 2:+75303570 MsG0280010807.01.T01:CDS
GGAATTTGAAGGTCGAGTCA+AGG 0.573311 2:+75304233 MsG0280010807.01.T01:CDS
AAACTTGTTCCATCAATGGT+TGG 0.574021 2:-75305584 None:intergenic
ACTCAAAGAAGAACTTGTGC+TGG 0.576644 2:+75303282 MsG0280010807.01.T01:CDS
TTGACTTTAACTCCTTCAGT+CGG 0.577388 2:-75304551 None:intergenic
AGGAGCTTGAGTCGAAAGAG+AGG 0.577870 2:+75303686 MsG0280010807.01.T01:CDS
ATGATGATGCTTTATCAGCA+AGG 0.582356 2:+75303086 MsG0280010807.01.T01:CDS
AGCAAGGTTTCATAAGAAGA+GGG 0.584239 2:+75303102 MsG0280010807.01.T01:CDS
GAATGACAGTTTCATCACTT+GGG 0.585475 2:-75305616 None:intergenic
TTTCTTCATCGAACCACACA+AGG 0.589314 2:-75303170 None:intergenic
GGAGTTCGAAGGTCAAGTTA+AGG 0.589743 2:+75304749 MsG0280010807.01.T01:CDS
ATATGGTGTTGGAGACACCT+TGG 0.590870 2:-75303194 None:intergenic
GCAACTGAATGGCCAAGTGA+AGG 0.595311 2:+75303876 MsG0280010807.01.T01:CDS
GAAGCTCGCAAGAAAATGCA+GGG 0.597595 2:+75303445 MsG0280010807.01.T01:CDS
TGCTACCATCAATTACAGAA+TGG 0.597842 2:-75305727 None:intergenic
AAGTTTATTTGCAAAACCCA+GGG 0.598095 2:-75305996 None:intergenic
TAGATACCAGCTCATTCACT+CGG 0.603896 2:-75303762 None:intergenic
GGAATTGGAAAGCCAAGTGA+AGG 0.609390 2:+75303612 MsG0280010807.01.T01:CDS
CAACTTGTAGACCAAATGAA+GGG 0.609683 2:+75304087 MsG0280010807.01.T01:CDS
GCAAGACACAAGTAGAAGAG+AGG 0.609718 2:+75303332 MsG0280010807.01.T01:CDS
GGAAAGCCAAGTGAAGGAGC+TGG 0.612850 2:+75303618 MsG0280010807.01.T01:CDS
AAATACTGAAAATTCTCTGG+TGG 0.614556 2:+75305853 MsG0280010807.01.T01:CDS
GAAAATTGACGAATGTGTCA+AGG 0.615476 2:+75303468 MsG0280010807.01.T01:CDS
GCTGTTTGAAATCCAAGTCA+AGG 0.615868 2:+75304044 MsG0280010807.01.T01:CDS
TCAAAAGAAAGGCATACTCA+AGG 0.616035 2:+75304486 MsG0280010807.01.T01:CDS
ATCTCACCGAAGATTAAACC+TGG 0.617839 2:+75305779 MsG0280010807.01.T01:CDS
GGATCTTGAGTCAAAAGTGA+AGG 0.619818 2:+75304191 MsG0280010807.01.T01:CDS
TATTCACCAGATCCTTCAGT+CGG 0.619944 2:-75304287 None:intergenic
AATTATTCCACGGTGTAACG+AGG 0.622806 2:+75305700 MsG0280010807.01.T01:CDS
GCAACTTGAACGCCAAGTCG+AGG 0.623834 2:+75304833 MsG0280010807.01.T01:CDS
AGAAGCAAATTGAAGAACGG+TGG 0.627150 2:+75304871 MsG0280010807.01.T01:CDS
GCAGTTTGAAAGCCAAGTGG+AGG 0.629827 2:+75304455 MsG0280010807.01.T01:CDS
GAAGGATCTGGTGAATAACC+TGG 0.636279 2:+75304293 MsG0280010807.01.T01:CDS
TACAGAACCCAATTATTCCA+CGG 0.636407 2:+75305690 MsG0280010807.01.T01:CDS
AAGAGAAGCAAATTGAAGAA+CGG 0.637855 2:+75304868 MsG0280010807.01.T01:CDS
AACTTGTAGACCAAATGAAG+GGG 0.638530 2:+75304088 MsG0280010807.01.T01:CDS
TGAAGGCCGAGTGAATGAGC+TGG 0.640827 2:+75303756 MsG0280010807.01.T01:CDS
TACAAAAGAGAAGCAACATG+AGG 0.643578 2:+75304359 MsG0280010807.01.T01:CDS
ACAAAAGAGAAGCAACATGA+GGG 0.643671 2:+75304360 MsG0280010807.01.T01:CDS
AGGGCAGCTCGGTTTGATGG+AGG 0.644192 2:+75303507 MsG0280010807.01.T01:CDS
TCAAAGGATGAGGAGTTCGA+AGG 0.647608 2:+75304738 MsG0280010807.01.T01:CDS
ATGAGCTGGTATCTAAAGAG+AGG 0.653525 2:+75303770 MsG0280010807.01.T01:CDS
GTAGCAAAGGAAGGGCAGCT+CGG 0.654192 2:+75303496 MsG0280010807.01.T01:CDS
ATTATTCCACGGTGTAACGA+GGG 0.659375 2:+75305701 MsG0280010807.01.T01:CDS
AGAGAGGCATTTCAAAAGCG+AGG 0.662656 2:+75303786 MsG0280010807.01.T01:CDS
TGCTCAGCACAAGACAGCTG+TGG 0.666122 2:+75305961 MsG0280010807.01.T01:CDS
ATATGCAGTTGCATCTAACA+CGG 0.668146 2:+75305547 MsG0280010807.01.T01:intron
GAGGCATTTCAAAAGCGAGG+TGG 0.670941 2:+75303789 MsG0280010807.01.T01:CDS
GCAATTCGAAAACCAAGTTG+AGG 0.673687 2:+75304791 MsG0280010807.01.T01:CDS
GAAGCAGTTTGAAAGCCAAG+TGG 0.692664 2:+75304452 MsG0280010807.01.T01:CDS
TGGTTCGATGAAGAAATCCA+AGG 0.694789 2:+75303177 MsG0280010807.01.T01:CDS
AAGCTCGCAAGAAAATGCAG+GGG 0.717186 2:+75303446 MsG0280010807.01.T01:CDS
TGGTCTCCCTCGTTACACCG+TGG 0.726233 2:-75305707 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATACTACATTTTTTTT+TGG - Chr2:75305190-75305209 None:intergenic 10.0%
!!! AAGATCACTTAAATTTTAAA+TGG + Chr2:75303014-75303033 MsG0280010807.01.T01:CDS 15.0%
!!! ATTAATAAACTATTTTGATG+AGG + Chr2:75305043-75305062 MsG0280010807.01.T01:CDS 15.0%
!! AAAATAAGAGAAAGGAAATT+AGG + Chr2:75303404-75303423 MsG0280010807.01.T01:CDS 20.0%
!! AAATAAGAGAAAGGAAATTA+GGG + Chr2:75303405-75303424 MsG0280010807.01.T01:CDS 20.0%
!! AATCAATTTAACACTATCTT+TGG + Chr2:75305376-75305395 MsG0280010807.01.T01:intron 20.0%
!!! AATAGGATTTTTTGAATGTA+TGG - Chr2:75305467-75305486 None:intergenic 20.0%
! AGAATTTGAAGGTAAAATGA+TGG + Chr2:75304413-75304432 MsG0280010807.01.T01:CDS 25.0%
! AGATCTTGAAAATAAGAGAA+AGG + Chr2:75303396-75303415 MsG0280010807.01.T01:CDS 25.0%
! CATTTCAAAACAAAAGGAAT+TGG + Chr2:75303597-75303616 MsG0280010807.01.T01:CDS 25.0%
! GAAAAATACTGAAAATTCTC+TGG + Chr2:75305850-75305869 MsG0280010807.01.T01:CDS 25.0%
! GAGTTTGAATCAAAAAAGAA+GGG + Chr2:75304255-75304274 MsG0280010807.01.T01:CDS 25.0%
! GGATAACATTTCAAAACAAA+AGG + Chr2:75303591-75303610 MsG0280010807.01.T01:CDS 25.0%
! TCAGAAGAAAAAGAATTTGA+AGG + Chr2:75303739-75303758 MsG0280010807.01.T01:CDS 25.0%
!! CAGTTTTTATATCACACATA+CGG + Chr2:75305289-75305308 MsG0280010807.01.T01:intron 25.0%
!! TTTTGATGAGGAAAAAGAAT+CGG + Chr2:75305055-75305074 MsG0280010807.01.T01:CDS 25.0%
!! TTTTTATAGTGTGTCTGTAT+GGG - Chr2:75305219-75305238 None:intergenic 25.0%
!!! ATACTACATTTTTTTTTGGC+AGG - Chr2:75305186-75305205 None:intergenic 25.0%
!!! TTTTTTATAGTGTGTCTGTA+TGG - Chr2:75305220-75305239 None:intergenic 25.0%
AAAGAGCTCAAGTTAAAAGA+AGG + Chr2:75304936-75304955 MsG0280010807.01.T01:CDS 30.0%
AAAGTTTATTTGCAAAACCC+AGG - Chr2:75306000-75306019 None:intergenic 30.0%
AAATACTGAAAATTCTCTGG+TGG + Chr2:75305853-75305872 MsG0280010807.01.T01:CDS 30.0%
AAGAGAAGCAAATTGAAGAA+CGG + Chr2:75304868-75304887 MsG0280010807.01.T01:CDS 30.0%
AAGTTTATTTGCAAAACCCA+GGG - Chr2:75305999-75306018 None:intergenic 30.0%
ACAAAATTGATGCCATTGAA+AGG + Chr2:75303823-75303842 MsG0280010807.01.T01:CDS 30.0%
AGAACTAAAGACAAAAGAGT+TGG + Chr2:75303552-75303571 MsG0280010807.01.T01:CDS 30.0%
AGAGAATAAGTTCAAAGTAC+TGG + Chr2:75304911-75304930 MsG0280010807.01.T01:CDS 30.0%
AGGAGCTTAAATCAAAAGAA+AGG + Chr2:75304475-75304494 MsG0280010807.01.T01:CDS 30.0%
CGTATGTGTGATATAAAAAC+TGG - Chr2:75305291-75305310 None:intergenic 30.0%
CTCCTCAATATCTTTCTTTA+TGG - Chr2:75303368-75303387 None:intergenic 30.0%
GCAATATGAAGAACAAATGA+AGG + Chr2:75304665-75304684 MsG0280010807.01.T01:CDS 30.0%
GGAGTTTGAATCAAAAAAGA+AGG + Chr2:75304254-75304273 MsG0280010807.01.T01:CDS 30.0%
GTCCATAAAGAAAGATATTG+AGG + Chr2:75303363-75303382 MsG0280010807.01.T01:CDS 30.0%
GTTAAAAGAAGGACAAATCA+AGG + Chr2:75304947-75304966 MsG0280010807.01.T01:CDS 30.0%
TCAAAAAAGAAGGGATTTGA+AGG + Chr2:75304264-75304283 MsG0280010807.01.T01:CDS 30.0%
TCAAAAGAGATGGAATTTGA+AGG + Chr2:75304117-75304136 MsG0280010807.01.T01:CDS 30.0%
TCAAAAGAGGATGAATTTGA+AGG + Chr2:75304570-75304589 MsG0280010807.01.T01:CDS 30.0%
TCAAAAGTGAGAGAATTTGA+AGG + Chr2:75304402-75304421 MsG0280010807.01.T01:CDS 30.0%
TCAATACCATTTCCTTCAAT+TGG - Chr2:75304143-75304162 None:intergenic 30.0%
TCATAATCATCATATGGTGT+TGG - Chr2:75303208-75303227 None:intergenic 30.0%
TCATCGTCATAATCATCATA+TGG - Chr2:75303214-75303233 None:intergenic 30.0%
TTGAAAGAGAAGGAATTTGA+AGG + Chr2:75304222-75304241 MsG0280010807.01.T01:CDS 30.0%
TTGATTTAAACCCCTTCATT+TGG - Chr2:75304101-75304120 None:intergenic 30.0%
TTTAAATGGCTAGCATCATT+CGG + Chr2:75303028-75303047 MsG0280010807.01.T01:CDS 30.0%
TTTCGATGAAGATGAAATCT+TGG + Chr2:75305922-75305941 MsG0280010807.01.T01:CDS 30.0%
TTTGATGAGGAAAAAGAATC+GGG + Chr2:75305056-75305075 MsG0280010807.01.T01:CDS 30.0%
! ATATCCAAAACAACTTTTGC+TGG - Chr2:75305668-75305687 None:intergenic 30.0%
! CTTGAAGGATTTTGAATCAA+AGG + Chr2:75304722-75304741 MsG0280010807.01.T01:CDS 30.0%
! GCTTTTGTCAGTTTATGAAT+TGG + Chr2:75305892-75305911 MsG0280010807.01.T01:CDS 30.0%
! GGAAATGGTATTGAATCAAA+AGG + Chr2:75304149-75304168 MsG0280010807.01.T01:CDS 30.0%
! GGTTTTGCAAATAAACTTTC+AGG + Chr2:75306001-75306020 MsG0280010807.01.T01:CDS 30.0%
! TCAATGGCATCAATTTTGTA+TGG - Chr2:75303822-75303841 None:intergenic 30.0%
! TGAATTTGATGGACAATTGA+AGG + Chr2:75304989-75305008 MsG0280010807.01.T01:CDS 30.0%
! TGTTGCTTCTAAAAGTATGA+GGG + Chr2:75305502-75305521 MsG0280010807.01.T01:intron 30.0%
!! AATGCTTTTGTTTAGATACC+AGG - Chr2:75304314-75304333 None:intergenic 30.0%
AACTTGTAGACCAAATGAAG+GGG + Chr2:75304088-75304107 MsG0280010807.01.T01:CDS 35.0%
ACAAAAGAGAAGCAACATGA+GGG + Chr2:75304360-75304379 MsG0280010807.01.T01:CDS 35.0%
AGAAAGGAAATTAGGGATGT+TGG + Chr2:75303412-75303431 MsG0280010807.01.T01:CDS 35.0%
AGAATGACAGTTTCATCACT+TGG - Chr2:75305620-75305639 None:intergenic 35.0%
AGAATTTGAAAGCCAAGTGA+TGG + Chr2:75304002-75304021 MsG0280010807.01.T01:CDS 35.0%
AGCAAGGTTTCATAAGAAGA+GGG + Chr2:75303102-75303121 MsG0280010807.01.T01:CDS 35.0%
ATATGCAGTTGCATCTAACA+CGG + Chr2:75305547-75305566 MsG0280010807.01.T01:intron 35.0%
ATTCAGTTGCTTCTCTTTAG+AGG - Chr2:75303866-75303885 None:intergenic 35.0%
CAACTTGTAGACCAAATGAA+GGG + Chr2:75304087-75304106 MsG0280010807.01.T01:CDS 35.0%
CAATTAAGTCCAACCATTGA+TGG + Chr2:75305575-75305594 MsG0280010807.01.T01:CDS 35.0%
CTTACACCAGGTTTAATCTT+CGG - Chr2:75305788-75305807 None:intergenic 35.0%
GAAAATTGACGAATGTGTCA+AGG + Chr2:75303468-75303487 MsG0280010807.01.T01:CDS 35.0%
GAAGGAGTTAAAGTCAAAAG+AGG + Chr2:75304557-75304576 MsG0280010807.01.T01:CDS 35.0%
GAATGACAGTTTCATCACTT+GGG - Chr2:75305619-75305638 None:intergenic 35.0%
GACACACTGTCAAACTAATT+TGG + Chr2:75305311-75305330 MsG0280010807.01.T01:intron 35.0%
GATTAAACCTGGTGTAAGAA+AGG + Chr2:75305790-75305809 MsG0280010807.01.T01:CDS 35.0%
GCATTTCGAAAGCCATATTA+AGG + Chr2:75303666-75303685 MsG0280010807.01.T01:CDS 35.0%
GCTGGTAGAAAAATCATTTG+AGG + Chr2:75303300-75303319 MsG0280010807.01.T01:CDS 35.0%
GGAATTCAAAGTACACTTGA+AGG + Chr2:75304707-75304726 MsG0280010807.01.T01:CDS 35.0%
GGGGTTTAAATCAAAAGAGA+TGG + Chr2:75304107-75304126 MsG0280010807.01.T01:CDS 35.0%
GTTAGATGCAACTGCATATT+TGG - Chr2:75305546-75305565 None:intergenic 35.0%
TACAAAAGAGAAGCAACATG+AGG + Chr2:75304359-75304378 MsG0280010807.01.T01:CDS 35.0%
TACAGAACCCAATTATTCCA+CGG + Chr2:75305690-75305709 MsG0280010807.01.T01:CDS 35.0%
TCAAAGCTGGATGAATTTGA+TGG + Chr2:75304978-75304997 MsG0280010807.01.T01:CDS 35.0%
TCATCACCAACACAAAACTT+TGG - Chr2:75302989-75303008 None:intergenic 35.0%
TCTAAAGAGAAGCAACTGAA+TGG + Chr2:75303865-75303884 MsG0280010807.01.T01:CDS 35.0%
TCTAAAGAGAAGCAACTTGA+TGG + Chr2:75304528-75304547 MsG0280010807.01.T01:CDS 35.0%
TGCTACCATCAATTACAGAA+TGG - Chr2:75305730-75305749 None:intergenic 35.0%
TTGACTCAAGATCCATCATT+CGG - Chr2:75304185-75304204 None:intergenic 35.0%
TTGACTTTAACTCCTTCAGT+CGG - Chr2:75304554-75304573 None:intergenic 35.0%
! AAACTTGTTCCATCAATGGT+TGG - Chr2:75305587-75305606 None:intergenic 35.0%
! AAGGATTTTGTAGCAAAGGA+AGG + Chr2:75303487-75303506 MsG0280010807.01.T01:CDS 35.0%
! AGATCCAGCAAAAGTTGTTT+TGG + Chr2:75305661-75305680 MsG0280010807.01.T01:CDS 35.0%
! AGGATTTTGTAGCAAAGGAA+GGG + Chr2:75303488-75303507 MsG0280010807.01.T01:CDS 35.0%
! ATGATGATGCTTTATCAGCA+AGG + Chr2:75303086-75303105 MsG0280010807.01.T01:CDS 35.0%
! CTGTTGCTTCTAAAAGTATG+AGG + Chr2:75305501-75305520 MsG0280010807.01.T01:intron 35.0%
! GGATTTTGAATCAAAGGATG+AGG + Chr2:75304728-75304747 MsG0280010807.01.T01:CDS 35.0%
! TCAAAAGAAAGGCATACTCA+AGG + Chr2:75304486-75304505 MsG0280010807.01.T01:CDS 35.0%
! TGTCAAGGATTTTGTAGCAA+AGG + Chr2:75303483-75303502 MsG0280010807.01.T01:CDS 35.0%
! TTGATTTGAAGTCCTCAACT+TGG - Chr2:75304806-75304825 None:intergenic 35.0%
!! GATAAGCCAAAGTTTTGTGT+TGG + Chr2:75302980-75302999 MsG0280010807.01.T01:CDS 35.0%
!! TCCTTAACTTGTCCTTTCAA+TGG - Chr2:75303838-75303857 None:intergenic 35.0%
!! TTGATTTGTATTCCTCGACT+TGG - Chr2:75304848-75304867 None:intergenic 35.0%
AACTACACTGCCAGTTAAGA+GGG + Chr2:75303129-75303148 MsG0280010807.01.T01:CDS 40.0%
AAGAGGATGAATTTGAAGGC+CGG + Chr2:75304574-75304593 MsG0280010807.01.T01:CDS 40.0%
AATGCTTCCTTTCTTACACC+AGG - Chr2:75305800-75305819 None:intergenic 40.0%
AATTATTCCACGGTGTAACG+AGG + Chr2:75305700-75305719 MsG0280010807.01.T01:CDS 40.0%
ACAGTTTGAGAACCGAATCA+AGG + Chr2:75303918-75303937 MsG0280010807.01.T01:CDS 40.0%
ACTCAAAGAAGAACTTGTGC+TGG + Chr2:75303282-75303301 MsG0280010807.01.T01:CDS 40.0%
AGAAGCAAATTGAAGAACGG+TGG + Chr2:75304871-75304890 MsG0280010807.01.T01:CDS 40.0%
ATCTCACCGAAGATTAAACC+TGG + Chr2:75305779-75305798 MsG0280010807.01.T01:CDS 40.0%
ATGAGCTGGTATCTAAAGAG+AGG + Chr2:75303770-75303789 MsG0280010807.01.T01:CDS 40.0%
ATTATTCCACGGTGTAACGA+GGG + Chr2:75305701-75305720 MsG0280010807.01.T01:CDS 40.0%
CACAAGTTCTTCTTTGAGTG+TGG - Chr2:75303281-75303300 None:intergenic 40.0%
CAGCAAATGCAGATGACAAT+AGG - Chr2:75305484-75305503 None:intergenic 40.0%
CAGCAAGGTTTCATAAGAAG+AGG + Chr2:75303101-75303120 MsG0280010807.01.T01:CDS 40.0%
CCAACTTGTAGACCAAATGA+AGG + Chr2:75304086-75304105 MsG0280010807.01.T01:CDS 40.0%
CCTTCATTTGGTCTACAAGT+TGG - Chr2:75304089-75304108 None:intergenic 40.0%
CGTTACACCGTGGAATAATT+GGG - Chr2:75305700-75305719 None:intergenic 40.0%
CTGATTCATGCTCCTTCAAT+CGG - Chr2:75303723-75303742 None:intergenic 40.0%
GAAAATTCTCTGGTGGTTCT+CGG + Chr2:75305860-75305879 MsG0280010807.01.T01:CDS 40.0%
GATGACAACAATTCCTTGTG+TGG + Chr2:75303157-75303176 MsG0280010807.01.T01:CDS 40.0%
GCAATTCGAAAACCAAGTTG+AGG + Chr2:75304791-75304810 MsG0280010807.01.T01:CDS 40.0%
GCCATTGAAAGGACAAGTTA+AGG + Chr2:75303834-75303853 MsG0280010807.01.T01:CDS 40.0%
GGAATTTGAAGGCCAATTGA+AGG + Chr2:75304128-75304147 MsG0280010807.01.T01:CDS 40.0%
GGAGACCATTCTGTAATTGA+TGG + Chr2:75305722-75305741 MsG0280010807.01.T01:CDS 40.0%
GGAGCATGAATTGAAAGAGA+AGG + Chr2:75304212-75304231 MsG0280010807.01.T01:CDS 40.0%
GGATCTTGAGTCAAAAGTGA+AGG + Chr2:75304191-75304210 MsG0280010807.01.T01:CDS 40.0%
TAGATACCAGCTCATTCACT+CGG - Chr2:75303765-75303784 None:intergenic 40.0%
TATTCACCAGATCCTTCAGT+CGG - Chr2:75304290-75304309 None:intergenic 40.0%
TCAAAAGAGAAGCAGCATGA+AGG + Chr2:75303949-75303968 MsG0280010807.01.T01:CDS 40.0%
TCATCGAATACCCTCTTAAC+TGG - Chr2:75303142-75303161 None:intergenic 40.0%
TCGACTCAAGCTCCTTAATA+TGG - Chr2:75303681-75303700 None:intergenic 40.0%
TCGTTACACCGTGGAATAAT+TGG - Chr2:75305701-75305720 None:intergenic 40.0%
TGAAGGCCAATTGAAGGAAA+TGG + Chr2:75304134-75304153 MsG0280010807.01.T01:CDS 40.0%
TGGTTCGATGAAGAAATCCA+AGG + Chr2:75303177-75303196 MsG0280010807.01.T01:CDS 40.0%
TTGACTCAAGCTCCTTGATT+CGG - Chr2:75303933-75303952 None:intergenic 40.0%
TTGATTTAAGCTCCTCCACT+TGG - Chr2:75304470-75304489 None:intergenic 40.0%
TTTCTTCATCGAACCACACA+AGG - Chr2:75303173-75303192 None:intergenic 40.0%
! CTGCAAACTTGTTCCATCAA+TGG - Chr2:75305591-75305610 None:intergenic 40.0%
! GCTGTTTGAAATCCAAGTCA+AGG + Chr2:75304044-75304063 MsG0280010807.01.T01:CDS 40.0%
!! AATTCATCCAGCTTTGAACC+AGG - Chr2:75304975-75304994 None:intergenic 40.0%
!! GGATTTTGATAGCCGAATGA+TGG + Chr2:75304170-75304189 MsG0280010807.01.T01:CDS 40.0%
AAGCTCGCAAGAAAATGCAG+GGG + Chr2:75303446-75303465 MsG0280010807.01.T01:CDS 45.0%
AGAGGATGAATTTGAAGGCC+GGG + Chr2:75304575-75304594 MsG0280010807.01.T01:CDS 45.0%
CAACTACACTGCCAGTTAAG+AGG + Chr2:75303128-75303147 MsG0280010807.01.T01:CDS 45.0%
GAAGCAGTTTGAAAGCCAAG+TGG + Chr2:75304452-75304471 MsG0280010807.01.T01:CDS 45.0%
GAAGCTCGCAAGAAAATGCA+GGG + Chr2:75303445-75303464 MsG0280010807.01.T01:CDS 45.0%
GAAGGACAAATCAAGGATCC+TGG + Chr2:75304954-75304973 MsG0280010807.01.T01:CDS 45.0%
GAAGGAGCTGGTGAATGATT+TGG + Chr2:75303630-75303649 MsG0280010807.01.T01:CDS 45.0%
GAAGGATCTGGTGAATAACC+TGG + Chr2:75304293-75304312 MsG0280010807.01.T01:CDS 45.0%
GCAAGACACAAGTAGAAGAG+AGG + Chr2:75303332-75303351 MsG0280010807.01.T01:CDS 45.0%
GGAATTGGAAAGCCAAGTGA+AGG + Chr2:75303612-75303631 MsG0280010807.01.T01:CDS 45.0%
GGAATTTGAAGGTCGAGTCA+AGG + Chr2:75304233-75304252 MsG0280010807.01.T01:CDS 45.0%
GGAGTTCGAAGGTCAAGTTA+AGG + Chr2:75304749-75304768 MsG0280010807.01.T01:CDS 45.0%
GGAGTTGCAGTCAAAAGAAG+AGG + Chr2:75304686-75304705 MsG0280010807.01.T01:CDS 45.0%
GGTTTGATGGAGGACTTGAT+TGG + Chr2:75303517-75303536 MsG0280010807.01.T01:CDS 45.0%
GTTGGAACTTCGTCAAGTCA+TGG + Chr2:75303570-75303589 MsG0280010807.01.T01:CDS 45.0%
TAGATTCCAGCTCCTTCACT+TGG - Chr2:75303891-75303910 None:intergenic 45.0%
TAGATTGCTGCTCCATCACT+TGG - Chr2:75304017-75304036 None:intergenic 45.0%
TCAAAGGATGAGGAGTTCGA+AGG + Chr2:75304738-75304757 MsG0280010807.01.T01:CDS 45.0%
TTGATTCATGCTCCATCACC+CGG - Chr2:75304386-75304405 None:intergenic 45.0%
TTGATTCATGCTCCTTCACC+CGG - Chr2:75303975-75303994 None:intergenic 45.0%
! AATCCAAGTCAAGGCGTTAG+AGG + Chr2:75304053-75304072 MsG0280010807.01.T01:CDS 45.0%
! ATATGGTGTTGGAGACACCT+TGG - Chr2:75303197-75303216 None:intergenic 45.0%
!! AGAGAGGCATTTCAAAAGCG+AGG + Chr2:75303786-75303805 MsG0280010807.01.T01:CDS 45.0%
AAGAGAAGCAACATGAGGGC+CGG + Chr2:75304364-75304383 MsG0280010807.01.T01:CDS 50.0%
AAGAGAAGCAGCATGAAGGC+CGG + Chr2:75303953-75303972 MsG0280010807.01.T01:CDS 50.0%
AGGAGCTTGAGTCGAAAGAG+AGG + Chr2:75303686-75303705 MsG0280010807.01.T01:CDS 50.0%
CAAGGATCCTGGTTCAAAGC+TGG + Chr2:75304965-75304984 MsG0280010807.01.T01:CDS 50.0%
CATTCACCAGCTCCTTCACT+TGG - Chr2:75303627-75303646 None:intergenic 50.0%
CGAAGCTCGCAAGAAAATGC+AGG + Chr2:75303444-75303463 MsG0280010807.01.T01:CDS 50.0%
GCAACTGAATGGCCAAGTGA+AGG + Chr2:75303876-75303895 MsG0280010807.01.T01:CDS 50.0%
GCAGTTTGAAAGCCAAGTGG+AGG + Chr2:75304455-75304474 MsG0280010807.01.T01:CDS 50.0%
GCATTTCAAAAGCGAGGTGG+AGG + Chr2:75303792-75303811 MsG0280010807.01.T01:CDS 50.0%
GTGGAACTGTTTCAGACCCT+GGG + Chr2:75305980-75305999 MsG0280010807.01.T01:CDS 50.0%
GTGTTTCGAGCTGCTTCTGT+CGG - Chr2:75304638-75304657 None:intergenic 50.0%
TCGAAAGAGAGGCAGCTTGA+AGG + Chr2:75303697-75303716 MsG0280010807.01.T01:CDS 50.0%
TGTGGAACTGTTTCAGACCC+TGG + Chr2:75305979-75305998 MsG0280010807.01.T01:CDS 50.0%
TTGCCTCTAACGCCTTGACT+TGG - Chr2:75304059-75304078 None:intergenic 50.0%
TTGTATGAAGCTCGCTCGCT+TGG - Chr2:75304344-75304363 None:intergenic 50.0%
! GAGGCATTTCAAAAGCGAGG+TGG + Chr2:75303789-75303808 MsG0280010807.01.T01:CDS 50.0%
AGAGAAGCAACATGAGGGCC+GGG + Chr2:75304365-75304384 MsG0280010807.01.T01:CDS 55.0%
AGAGAAGCAGCATGAAGGCC+GGG + Chr2:75303954-75303973 MsG0280010807.01.T01:CDS 55.0%
GAATGGCCAAGTGAAGGAGC+TGG + Chr2:75303882-75303901 MsG0280010807.01.T01:CDS 55.0%
GCAACTTGAACGCCAAGTCG+AGG + Chr2:75304833-75304852 MsG0280010807.01.T01:CDS 55.0%
GCAGCTTGAAGGCCGATTGA+AGG + Chr2:75303708-75303727 MsG0280010807.01.T01:CDS 55.0%
GGAAAGCCAAGTGAAGGAGC+TGG + Chr2:75303618-75303637 MsG0280010807.01.T01:CDS 55.0%
GGGATTTGAAGGCCGACTGA+AGG + Chr2:75304275-75304294 MsG0280010807.01.T01:CDS 55.0%
GTAGCAAAGGAAGGGCAGCT+CGG + Chr2:75303496-75303515 MsG0280010807.01.T01:CDS 55.0%
TGAAGGCCGACTGAAGGATC+TGG + Chr2:75304281-75304300 MsG0280010807.01.T01:CDS 55.0%
TGAAGGCCGAGTGAATGAGC+TGG + Chr2:75303756-75303775 MsG0280010807.01.T01:CDS 55.0%
TGAATTTGAAGGCCGGGCGA+AGG + Chr2:75304581-75304600 MsG0280010807.01.T01:CDS 55.0%
TGCTCAGCACAAGACAGCTG+TGG + Chr2:75305961-75305980 MsG0280010807.01.T01:CDS 55.0%
! GCAACTTGATGGCCGACTGA+AGG + Chr2:75304539-75304558 MsG0280010807.01.T01:CDS 55.0%
CAGATTCGAGCTCCTTCGCC+CGG - Chr2:75304596-75304615 None:intergenic 60.0%
TGGTCTCCCTCGTTACACCG+TGG - Chr2:75305710-75305729 None:intergenic 60.0%
! AGGGCAGCTCGGTTTGATGG+AGG + Chr2:75303507-75303526 MsG0280010807.01.T01:CDS 60.0%
! GGAAGGGCAGCTCGGTTTGA+TGG + Chr2:75303504-75303523 MsG0280010807.01.T01:CDS 60.0%
GCAACATGAGGGCCGGGTGA+TGG + Chr2:75304371-75304390 MsG0280010807.01.T01:CDS 65.0%
GCAGCATGAAGGCCGGGTGA+AGG + Chr2:75303960-75303979 MsG0280010807.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 75302956 75306033 75302956 ID=MsG0280010807.01;Name=MsG0280010807.01
Chr2 mRNA 75302956 75306033 75302956 ID=MsG0280010807.01.T01;Parent=MsG0280010807.01;Name=MsG0280010807.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|2|0|866
Chr2 exon 75302956 75305077 75302956 ID=MsG0280010807.01.T01:exon:11601;Parent=MsG0280010807.01.T01
Chr2 exon 75305555 75306033 75305555 ID=MsG0280010807.01.T01:exon:11602;Parent=MsG0280010807.01.T01
Chr2 CDS 75302956 75305077 75302956 ID=MsG0280010807.01.T01:cds;Parent=MsG0280010807.01.T01
Chr2 CDS 75305555 75306033 75305555 ID=MsG0280010807.01.T01:cds;Parent=MsG0280010807.01.T01
Gene Sequence

>MsG0280010807.01.T01

ATGATGGACGTTGTTGAGGTTTCTGATAAGCCAAAGTTTTGTGTTGGTGATGATGATGAAGATCACTTAAATTTTAAATGGCTAGCATCATTCGGTAAAAATACATCGCAATCAGCTTCTCGTGAAGATGATGATGATGCTTTATCAGCAAGGTTTCATAAGAAGAGGGATACAACTACACTGCCAGTTAAGAGGGTATTCGATGACAACAATTCCTTGTGTGGTTCGATGAAGAAATCCAAGGTGTCTCCAACACCATATGATGATTATGACGATGATGATGCTGATGATGATGATGACATGTCAACTGATAAATCATTTTCCACACTCAAAGAAGAACTTGTGCTGGTAGAAAAATCATTTGAGGATATCAGAAGCAAGACACAAGTAGAAGAGAGGAGATTGCAGTCCATAAAGAAAGATATTGAGGAGTGCTGCGAAGATCTTGAAAATAAGAGAAAGGAAATTAGGGATGTTGGAAGAATTAACGAAGCTCGCAAGAAAATGCAGGGGAAAATTGACGAATGTGTCAAGGATTTTGTAGCAAAGGAAGGGCAGCTCGGTTTGATGGAGGACTTGATTGGAGAGCACAAGAAAGAACTAAAGACAAAAGAGTTGGAACTTCGTCAAGTCATGGATAACATTTCAAAACAAAAGGAATTGGAAAGCCAAGTGAAGGAGCTGGTGAATGATTTGGTATCAAAACAGAAGCATTTCGAAAGCCATATTAAGGAGCTTGAGTCGAAAGAGAGGCAGCTTGAAGGCCGATTGAAGGAGCATGAATCAGAAGAAAAAGAATTTGAAGGCCGAGTGAATGAGCTGGTATCTAAAGAGAGGCATTTCAAAAGCGAGGTGGAGGAGATCCATACAAAATTGATGCCATTGAAAGGACAAGTTAAGGAACTTGCCTCTAAAGAGAAGCAACTGAATGGCCAAGTGAAGGAGCTGGAATCTAAAAAGAAACAGTTTGAGAACCGAATCAAGGAGCTTGAGTCAAAAGAGAAGCAGCATGAAGGCCGGGTGAAGGAGCATGAATCAAAAGAGAGAGAATTTGAAAGCCAAGTGATGGAGCAGCAATCTAAAAAGAAGCTGTTTGAAATCCAAGTCAAGGCGTTAGAGGCAAAAGAAAACCAACTTGTAGACCAAATGAAGGGGTTTAAATCAAAAGAGATGGAATTTGAAGGCCAATTGAAGGAAATGGTATTGAATCAAAAGGATTTTGATAGCCGAATGATGGATCTTGAGTCAAAAGTGAAGGAGCATGAATTGAAAGAGAAGGAATTTGAAGGTCGAGTCAAGGAGTTTGAATCAAAAAAGAAGGGATTTGAAGGCCGACTGAAGGATCTGGTGAATAACCTGGTATCTAAACAAAAGCATTTGAAAAGCCAAGCGAGCGAGCTTCATACAAAAGAGAAGCAACATGAGGGCCGGGTGATGGAGCATGAATCAAAAGTGAGAGAATTTGAAGGTAAAATGATGGATCTAGAATCTAAAATGAAGCAGTTTGAAAGCCAAGTGGAGGAGCTTAAATCAAAAGAAAGGCATACTCAAGGACAAGTTAAAGAACTTGAGTCTAAAGAGAAGCAACTTGATGGCCGACTGAAGGAGTTAAAGTCAAAAGAGGATGAATTTGAAGGCCGGGCGAAGGAGCTCGAATCTGAAAAGAAGCATTTTGAGAGCCGACAGAAGCAGCTCGAAACACAAGAAAAGCAATATGAAGAACAAATGAAGGAGTTGCAGTCAAAAGAAGAGGAATTCAAAGTACACTTGAAGGATTTTGAATCAAAGGATGAGGAGTTCGAAGGTCAAGTTAAGGAGCTCAAATCAAAAAAGAAGCAATTCGAAAACCAAGTTGAGGACTTCAAATCAAAAGAGAAGCAACTTGAACGCCAAGTCGAGGAATACAAATCAAAAGAGAAGCAAATTGAAGAACGGTGGAAAGAACTCGAGTCAAAAGAGAATAAGTTCAAAGTACTGGTCAAAGAGCTCAAGTTAAAAGAAGGACAAATCAAGGATCCTGGTTCAAAGCTGGATGAATTTGATGGACAATTGAAGGAGTCTGAGTTGACAGAGAAACAATTTGAATCATTAATAAACTATTTTGATGAGGAAAAAGAATCGGTTGCATCTAACACGGATGATCAATTAAGTCCAACCATTGATGGAACAAGTTTGCAGTTGCTCCCAAGTGATGAAACTGTCATTCTAGTTAATCTGCAAGAATCATCAGATCCAGCAAAAGTTGTTTTGGATATAATACAGAACCCAATTATTCCACGGTGTAACGAGGGAGACCATTCTGTAATTGATGGTAGCAGCGTCTTTCTGCTAGAACAACTGATGAGAATCTCACCGAAGATTAAACCTGGTGTAAGAAAGGAAGCATTGAAGCTAGCACTTCATCTGAAAGCTAACATGAAAAATACTGAAAATTCTCTGGTGGTTCTCGGTTTTCTACTGCTTTTGTCAGTTTATGAATTGGTTACTTATTTCGATGAAGATGAAATCTTGGAGCTTTTCACATTTGTTGCTCAGCACAAGACAGCTGTGGAACTGTTTCAGACCCTGGGTTTTGCAAATAAACTTTCAGGTATGTTTTAA

Protein sequence

>MsG0280010807.01.T01

MMDVVEVSDKPKFCVGDDDEDHLNFKWLASFGKNTSQSASREDDDDALSARFHKKRDTTTLPVKRVFDDNNSLCGSMKKSKVSPTPYDDYDDDDADDDDDMSTDKSFSTLKEELVLVEKSFEDIRSKTQVEERRLQSIKKDIEECCEDLENKRKEIRDVGRINEARKKMQGKIDECVKDFVAKEGQLGLMEDLIGEHKKELKTKELELRQVMDNISKQKELESQVKELVNDLVSKQKHFESHIKELESKERQLEGRLKEHESEEKEFEGRVNELVSKERHFKSEVEEIHTKLMPLKGQVKELASKEKQLNGQVKELESKKKQFENRIKELESKEKQHEGRVKEHESKEREFESQVMEQQSKKKLFEIQVKALEAKENQLVDQMKGFKSKEMEFEGQLKEMVLNQKDFDSRMMDLESKVKEHELKEKEFEGRVKEFESKKKGFEGRLKDLVNNLVSKQKHLKSQASELHTKEKQHEGRVMEHESKVREFEGKMMDLESKMKQFESQVEELKSKERHTQGQVKELESKEKQLDGRLKELKSKEDEFEGRAKELESEKKHFESRQKQLETQEKQYEEQMKELQSKEEEFKVHLKDFESKDEEFEGQVKELKSKKKQFENQVEDFKSKEKQLERQVEEYKSKEKQIEERWKELESKENKFKVLVKELKLKEGQIKDPGSKLDEFDGQLKESELTEKQFESLINYFDEEKESVASNTDDQLSPTIDGTSLQLLPSDETVILVNLQESSDPAKVVLDIIQNPIIPRCNEGDHSVIDGSSVFLLEQLMRISPKIKPGVRKEALKLALHLKANMKNTENSLVVLGFLLLLSVYELVTYFDEDEILELFTFVAQHKTAVELFQTLGFANKLSGMF*