AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045370.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045370.01.T01 MTR_8g070520 66.667 354 35 6 25 305 116 459 1.21e-155 443
MsG0880045370.01.T01 MTR_8g070520 65.903 349 36 6 25 300 116 454 2.93e-150 430
MsG0880045370.01.T01 MTR_3g010170 51.603 343 82 7 33 300 115 448 6.04e-109 325
MsG0880045370.01.T01 MTR_2g008050 35.664 143 77 4 166 300 217 352 2.25e-19 87.8
MsG0880045370.01.T01 MTR_3g095530 35.461 141 80 4 166 300 217 352 2.98e-19 87.4
MsG0880045370.01.T01 MTR_7g026230 34.043 141 82 4 166 300 217 352 3.55e-19 87.0
MsG0880045370.01.T01 MTR_6g004000 33.333 141 83 4 166 300 217 352 8.72e-19 86.3
MsG0880045370.01.T01 MTR_2g096840 33.333 141 83 4 166 300 217 352 9.25e-19 85.9
MsG0880045370.01.T01 MTR_0015s0130 34.043 141 82 4 166 300 217 352 1.31e-18 85.5
MsG0880045370.01.T01 MTR_7g093260 34.266 143 79 4 166 300 217 352 2.12e-18 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045370.01.T01 AT5G56180 48.084 287 75 5 88 300 32 318 3.53e-82 252
MsG0880045370.01.T01 AT5G56180 42.522 341 113 8 34 300 119 450 6.93e-78 245
MsG0880045370.01.T01 AT5G56180 40.154 259 72 6 30 214 115 364 3.27e-49 168
MsG0880045370.01.T01 AT2G42100 35.461 141 80 4 166 300 218 353 7.84e-21 92.0
MsG0880045370.01.T01 AT5G09810 36.364 143 76 4 166 300 217 352 2.16e-19 87.8
MsG0880045370.01.T01 AT3G12110 34.043 141 82 4 166 300 217 352 4.51e-19 87.0
MsG0880045370.01.T01 AT3G53750 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT3G53750 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT2G37620 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT2G37620 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT2G37620 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT2G37620 33.333 141 83 4 166 300 217 352 1.12e-18 85.9
MsG0880045370.01.T01 AT2G42090 32.624 141 84 4 166 300 206 341 1.03e-17 82.8
MsG0880045370.01.T01 AT3G18780 32.624 141 84 4 166 300 217 352 7.30e-17 80.5
MsG0880045370.01.T01 AT3G18780 32.624 141 84 4 166 300 217 352 8.27e-17 80.5
MsG0880045370.01.T01 AT3G18780 32.624 141 84 4 166 300 217 352 8.27e-17 80.5
MsG0880045370.01.T01 AT1G49240 32.624 141 84 4 166 300 217 352 8.67e-17 80.5
MsG0880045370.01.T01 AT2G42170 32.394 142 77 5 169 300 74 206 1.12e-16 78.2
MsG0880045370.01.T01 AT3G46520 32.624 141 84 4 166 300 217 352 1.33e-16 79.7
MsG0880045370.01.T01 AT3G46520 32.624 141 84 4 166 300 217 352 1.33e-16 79.7
MsG0880045370.01.T01 AT5G59370 31.915 141 85 4 166 300 217 352 4.54e-16 78.2
MsG0880045370.01.T01 AT5G59370 31.915 141 85 4 166 300 217 352 4.54e-16 78.2
MsG0880045370.01.T01 AT2G42170 31.724 145 80 5 166 300 169 304 5.44e-16 77.4
MsG0880045370.01.T01 AT2G42170 31.724 145 80 5 166 300 169 304 5.44e-16 77.4
MsG0880045370.01.T01 AT2G42170 31.724 145 80 5 166 300 169 304 6.25e-16 77.4
MsG0880045370.01.T01 AT2G42170 31.724 145 80 5 166 300 169 304 6.25e-16 77.4

Find 72 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCTGGATATTGCAAATT+TGG 0.188453 8:-58290414 MsG0880045370.01.T01:CDS
GAATTTGGTTTGCAGGAATT+TGG 0.205364 8:-58290152 MsG0880045370.01.T01:intron
TGTTATTGTGTAGGTGGTTC+TGG 0.261206 8:-58290429 MsG0880045370.01.T01:CDS
CTGATTCCATTTGACATATA+AGG 0.264725 8:+58286242 None:intergenic
TTATTCCAGCCACGTCTTGC+TGG 0.298378 8:-58286967 MsG0880045370.01.T01:CDS
AGCAATTAATCTTACCAAAA+AGG 0.303580 8:+58290353 None:intergenic
TATGCTGCAAATCAAACTTC+TGG 0.329129 8:-58288282 MsG0880045370.01.T01:CDS
GTTTAGGACTGTTGTCTTAT+CGG 0.346654 8:-58286455 MsG0880045370.01.T01:CDS
CAAGTGGCAGTGATTGGTTT+AGG 0.361848 8:-58286471 MsG0880045370.01.T01:CDS
ACAACAACCGCTTGAGAACT+TGG 0.367770 8:+58289849 None:intergenic
TGGTTTGGTGCAAAGCTTAT+TGG 0.372016 8:-58286185 MsG0880045370.01.T01:CDS
CTAACTCCATAGTGGCATAA+TGG 0.400216 8:+58289819 None:intergenic
TATTCCAGCCACGTCTTGCT+GGG 0.404356 8:-58286966 MsG0880045370.01.T01:CDS
TGTCGAAGCCTAGTATATAT+TGG 0.407667 8:+58290116 None:intergenic
CTTCCACCTTATATGTCAAA+TGG 0.419636 8:-58286248 MsG0880045370.01.T01:CDS
TCTTTGCCATTATGCCACTA+TGG 0.421080 8:-58289825 MsG0880045370.01.T01:CDS
GGAGGGTCTGCATGTTTACC+AGG 0.423295 8:-58286433 MsG0880045370.01.T01:CDS
TTCTGGAATAGCTGTAATAT+AGG 0.425238 8:-58288265 MsG0880045370.01.T01:CDS
AATTAGCAAGTGGCAGTGAT+TGG 0.430589 8:-58286477 MsG0880045370.01.T01:CDS
GTGAATGTTTAAGAGTTAAG+TGG 0.436769 8:+58286149 None:intergenic
TTTAGGACTGTTGTCTTATC+GGG 0.439760 8:-58286454 MsG0880045370.01.T01:CDS
TCAAAGGAGCGGTTTCAAAC+AGG 0.459948 8:-58286997 MsG0880045370.01.T01:CDS
CTGGATATTGCAAATTTGGA+TGG 0.460239 8:-58290410 MsG0880045370.01.T01:CDS
TAGCTCAGCTTCATAGTCAT+AGG 0.474195 8:+58287071 None:intergenic
GCATCATTTGAAGCCGTTGA+AGG 0.476455 8:-58287033 MsG0880045370.01.T01:CDS
GCATGTTTACCAGGGTTAGC+AGG 0.487442 8:-58286424 MsG0880045370.01.T01:intron
AGCAAAGAGGATCGTCCATT+GGG 0.490700 8:-58290387 MsG0880045370.01.T01:CDS
TGGAAACGCCAATATATACT+AGG 0.492118 8:-58290124 MsG0880045370.01.T01:CDS
GTATCTGCACCGTGTGGAGG+AGG 0.492978 8:+58286212 None:intergenic
CCATGCCATAGCTCTCTGTA+TGG 0.504884 8:-58286518 MsG0880045370.01.T01:CDS
GAGCAAAGAGGATCGTCCAT+TGG 0.508028 8:-58290388 MsG0880045370.01.T01:CDS
GCAAAATCATAAAACATACT+TGG 0.512981 8:+58288220 None:intergenic
CAGTGGGAGGAAGTCGCTCC+CGG 0.513199 8:+58290645 None:intergenic
ACACCCCAGCAAGACGTGGC+TGG 0.522679 8:+58286962 None:intergenic
TTTGCAGGAATTTGGTAATG+TGG 0.530792 8:-58290144 MsG0880045370.01.T01:intron
GCAAAACAAGGTGTGTGCAT+GGG 0.532146 8:-58291988 MsG0880045370.01.T01:CDS
CATCATTTGAAGCCGTTGAA+GGG 0.539680 8:-58287032 MsG0880045370.01.T01:CDS
GAGTGTAAACTTCCCTTCAA+CGG 0.540008 8:+58287020 None:intergenic
AGCAAAACAAGGTGTGTGCA+TGG 0.540947 8:-58291989 MsG0880045370.01.T01:CDS
TTGTTGTTTCTGCAGGATGA+AGG 0.547264 8:-58289877 MsG0880045370.01.T01:intron
GGACTGTTGTCTTATCGGGA+GGG 0.556421 8:-58286450 MsG0880045370.01.T01:CDS
AAGGTAGCAATTCGTCCCAA+TGG 0.561399 8:+58290372 None:intergenic
GGTGCAGATACTGCATGGTT+TGG 0.569726 8:-58286200 MsG0880045370.01.T01:CDS
ATTCCATTTGACATATAAGG+TGG 0.570415 8:+58286245 None:intergenic
AGGACTGTTGTCTTATCGGG+AGG 0.571888 8:-58286451 MsG0880045370.01.T01:CDS
AGGGAAGTTTACACTCTCAA+AGG 0.574977 8:-58287013 MsG0880045370.01.T01:CDS
ATAACTAACTAACTCCATAG+TGG 0.584030 8:+58289811 None:intergenic
CAAAACAAGGTGTGTGCATG+GGG 0.587270 8:-58291987 MsG0880045370.01.T01:CDS
ACTAACCGTCGATGATACAG+TGG 0.588325 8:+58290628 None:intergenic
ATTCCAGCCACGTCTTGCTG+GGG 0.595400 8:-58286965 MsG0880045370.01.T01:CDS
GCAGTATCTGCACCGTGTGG+AGG 0.600623 8:+58286209 None:intergenic
GAGCAATGATCAAAAGTGCA+AGG 0.606030 8:-58292019 None:intergenic
CAAATTTGGATGGAGCAAAG+AGG 0.606757 8:-58290400 MsG0880045370.01.T01:CDS
CTAATTCTGCAGAATGACAA+TGG 0.607049 8:+58286494 None:intergenic
TACTTCAGAGAGGTTAGAGA+AGG 0.607073 8:-58286285 MsG0880045370.01.T01:intron
ATGGTCCATACAGAGAGCTA+TGG 0.609311 8:+58286513 None:intergenic
TATCTGCACCGTGTGGAGGA+GGG 0.612373 8:+58286213 None:intergenic
TCCTCCCACTGTATCATCGA+CGG 0.613116 8:-58290633 MsG0880045370.01.T01:intron
CATTCTGCAGAATTAGCAAG+TGG 0.616376 8:-58286487 MsG0880045370.01.T01:CDS
CACACGGTGCAGATACTGCA+TGG 0.632974 8:-58286205 MsG0880045370.01.T01:CDS
GGAAGTTTACCTGCTAACCC+TGG 0.636739 8:+58286415 None:intergenic
CCATACAGAGAGCTATGGCA+TGG 0.645435 8:+58286518 None:intergenic
GAGGGTCTGCATGTTTACCA+GGG 0.648864 8:-58286432 MsG0880045370.01.T01:CDS
GGTGAAACCAAGTTCTCAAG+CGG 0.653510 8:-58289856 MsG0880045370.01.T01:CDS
AGTTTACACTCTCAAAGGAG+CGG 0.669684 8:-58287008 MsG0880045370.01.T01:CDS
AGAGTCATCCCTCCTCCACA+CGG 0.670384 8:-58286221 MsG0880045370.01.T01:CDS
ACTTACACCCCAGCAAGACG+TGG 0.673994 8:+58286958 None:intergenic
ACATGCTTAAACGACACGTG+TGG 0.676406 8:+58290677 None:intergenic
CTAACCGTCGATGATACAGT+GGG 0.690093 8:+58290629 None:intergenic
AAGGATAGAAGAGCAAAACA+AGG 0.701098 8:-58292000 MsG0880045370.01.T01:CDS
CATGCAGTATCTGCACCGTG+TGG 0.712978 8:+58286206 None:intergenic
ACCGTCGATGATACAGTGGG+AGG 0.731255 8:+58290632 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATCTTAATGATATAT+GGG + Chr8:58291847-58291866 None:intergenic 10.0%
!! TTAAAAATCTTAATGATATA+TGG + Chr8:58291848-58291867 None:intergenic 10.0%
!! AAATTAGTTACAAGATAAAT+AGG + Chr8:58290214-58290233 None:intergenic 15.0%
!! ATAACAAAATGTGATAAATA+TGG + Chr8:58291613-58291632 None:intergenic 15.0%
!! ATATATATTTCCAATTGTAT+TGG - Chr8:58286921-58286940 MsG0880045370.01.T01:intron 15.0%
!! ATATTAATGATTATATATGC+TGG - Chr8:58288920-58288939 MsG0880045370.01.T01:intron 15.0%
!! GAAAATATAAACAAATACTA+TGG + Chr8:58291581-58291600 None:intergenic 15.0%
!! TATTAATGATTATATATGCT+GGG - Chr8:58288921-58288940 MsG0880045370.01.T01:intron 15.0%
!! TTAAATAAATAAGCAATGTA+GGG + Chr8:58290960-58290979 None:intergenic 15.0%
!!! ATATTTATTAACATTGGTTA+AGG + Chr8:58288697-58288716 None:intergenic 15.0%
!!! ATTTTAACTCACAATTTTTT+TGG - Chr8:58289041-58289060 MsG0880045370.01.T01:intron 15.0%
!!! TATTTATCACATTTTGTTAT+AGG - Chr8:58291613-58291632 MsG0880045370.01.T01:intron 15.0%
!!! TCTTATTTATTTTGCTTTAA+TGG - Chr8:58287970-58287989 MsG0880045370.01.T01:intron 15.0%
!!! TGATTTGAACTAATAATTTT+AGG + Chr8:58289635-58289654 None:intergenic 15.0%
!!! TTGAATTTAAAGTTTGTATT+AGG - Chr8:58288973-58288992 MsG0880045370.01.T01:intron 15.0%
!!! TTTTAACTCACAATTTTTTT+GGG - Chr8:58289042-58289061 MsG0880045370.01.T01:intron 15.0%
!!! TTTTTTATATTGTTGGAATA+AGG - Chr8:58291397-58291416 MsG0880045370.01.T01:intron 15.0%
!! AAAATTAAGAAGTTAGACAA+AGG + Chr8:58287845-58287864 None:intergenic 20.0%
!! AACCTATGATAAATAAGATT+TGG - Chr8:58289473-58289492 MsG0880045370.01.T01:intron 20.0%
!! AATCGAAAACAAATAAGTTA+AGG + Chr8:58289833-58289852 None:intergenic 20.0%
!! ACCATACAGTATTATATATA+TGG - Chr8:58291501-58291520 MsG0880045370.01.T01:intron 20.0%
!! ACCATATATATAATACTGTA+TGG + Chr8:58291505-58291524 None:intergenic 20.0%
!! AGAAAATAGCAAATTTAGAA+AGG - Chr8:58289713-58289732 MsG0880045370.01.T01:intron 20.0%
!! AGAGTTACTAAGATTTAATT+AGG + Chr8:58286990-58287009 None:intergenic 20.0%
!! ATAAACAAATACTATGGAAT+GGG + Chr8:58291575-58291594 None:intergenic 20.0%
!! CTTAAATAAATAAGCAATGT+AGG + Chr8:58290961-58290980 None:intergenic 20.0%
!! CTTAGAAAAAAGCAAATATT+GGG + Chr8:58291011-58291030 None:intergenic 20.0%
!! GATAATTAGAAAAGACATAA+TGG - Chr8:58289543-58289562 MsG0880045370.01.T01:intron 20.0%
!! TAATTAAAGAACAAAGAGAA+TGG + Chr8:58289523-58289542 None:intergenic 20.0%
!! TATAAACAAATACTATGGAA+TGG + Chr8:58291576-58291595 None:intergenic 20.0%
!! TATATAATACTGTATGGTTT+AGG + Chr8:58291499-58291518 None:intergenic 20.0%
!! TATCATAGGTTAAAAGTTAA+GGG + Chr8:58289464-58289483 None:intergenic 20.0%
!! TTAACTCTTAAGAACTAATT+TGG - Chr8:58288618-58288637 MsG0880045370.01.T01:intron 20.0%
!! TTACTTACTTAGTTTATGTT+TGG - Chr8:58287574-58287593 MsG0880045370.01.T01:intron 20.0%
!! TTATCATAGGTTAAAAGTTA+AGG + Chr8:58289465-58289484 None:intergenic 20.0%
!!! AAACCATTTTCAATAATTAG+TGG - Chr8:58291372-58291391 MsG0880045370.01.T01:intron 20.0%
!!! AAAGTTGTAGAGTTTAAAAT+TGG + Chr8:58291431-58291450 None:intergenic 20.0%
!!! ATCCAAATCTTATTTATCAT+AGG + Chr8:58289478-58289497 None:intergenic 20.0%
!!! ATTAACTTGTGTTGTTTAAT+TGG - Chr8:58287416-58287435 MsG0880045370.01.T01:intron 20.0%
!!! CTAATAATTTTAGGAGAATA+CGG + Chr8:58289626-58289645 None:intergenic 20.0%
!!! GAAAAGTGTCAAAATAAAAA+GGG + Chr8:58291780-58291799 None:intergenic 20.0%
!!! GTAATTGTGATTTTCAAATA+TGG + Chr8:58288396-58288415 None:intergenic 20.0%
!!! TATTTTGAAAGACCAATTTA+GGG - Chr8:58288549-58288568 MsG0880045370.01.T01:intron 20.0%
!!! TGAAATCTGAGTAATTTTTT+TGG - Chr8:58288651-58288670 MsG0880045370.01.T01:intron 20.0%
!!! TGTTACTTTATGATTACTTA+CGG + Chr8:58287389-58287408 None:intergenic 20.0%
!!! TTCAATTTTACTGTTATGAT+AGG + Chr8:58288754-58288773 None:intergenic 20.0%
!!! TTGTAATTTTGATTCGTTTA+GGG - Chr8:58290491-58290510 MsG0880045370.01.T01:intron 20.0%
!!! TTGTGATTTACAGTTTTAAA+TGG - Chr8:58290727-58290746 MsG0880045370.01.T01:intron 20.0%
!!! TTTGTAATTTTGATTCGTTT+AGG - Chr8:58290490-58290509 MsG0880045370.01.T01:intron 20.0%
!!! TTTGTGAAATTTTGTAATGT+AGG - Chr8:58289852-58289871 MsG0880045370.01.T01:CDS 20.0%
! AAAATTGTTCATCAACAAGA+AGG + Chr8:58288127-58288146 None:intergenic 25.0%
! AAATTCTATGTCTAATGGAA+AGG - Chr8:58288263-58288282 MsG0880045370.01.T01:CDS 25.0%
! AAGTATCTAAATTACCACTA+TGG + Chr8:58287632-58287651 None:intergenic 25.0%
! AATGCATATATGCTCAATAA+GGG + Chr8:58290709-58290728 None:intergenic 25.0%
! ACTGGGATATTTATTAACAT+TGG + Chr8:58288703-58288722 None:intergenic 25.0%
! ACTTGAGAAATTAGATCTTT+AGG - Chr8:58288481-58288500 MsG0880045370.01.T01:intron 25.0%
! AGCAATTAATCTTACCAAAA+AGG + Chr8:58287821-58287840 None:intergenic 25.0%
! ATCATAGGTTAAAAGTTAAG+GGG + Chr8:58289463-58289482 None:intergenic 25.0%
! ATGATAAAATCAGTTACTTG+TGG - Chr8:58287889-58287908 MsG0880045370.01.T01:intron 25.0%
! ATGCCACTAATTATTGAAAA+TGG + Chr8:58291378-58291397 None:intergenic 25.0%
! CAAAAATTTACTTATGCACA+CGG + Chr8:58286219-58286238 None:intergenic 25.0%
! CCAGAAAAACATAACTAAAA+GGG + Chr8:58287998-58288017 None:intergenic 25.0%
! CTTGAGAAATTAGATCTTTA+GGG - Chr8:58288482-58288501 MsG0880045370.01.T01:intron 25.0%
! GCAAAATCATAAAACATACT+TGG + Chr8:58289954-58289973 None:intergenic 25.0%
! GCTTAGAAAAAAGCAAATAT+TGG + Chr8:58291012-58291031 None:intergenic 25.0%
! TAAAAGCTTAAGAAAAATGC+AGG + Chr8:58286584-58286603 None:intergenic 25.0%
! TAAACAAATACTATGGAATG+GGG + Chr8:58291574-58291593 None:intergenic 25.0%
! TAGTTACAAGATAAATAGGA+GGG + Chr8:58290210-58290229 None:intergenic 25.0%
! TATAAACCAGATAATTGCAA+AGG + Chr8:58286444-58286463 None:intergenic 25.0%
! TATATTTCCAATTGTATTGG+CGG - Chr8:58286924-58286943 MsG0880045370.01.T01:intron 25.0%
! TCCTTATGTTAAAATTGATG+AGG + Chr8:58286784-58286803 None:intergenic 25.0%
! TTAACATAAGGAACAAAAGA+AGG - Chr8:58286792-58286811 MsG0880045370.01.T01:intron 25.0%
! TTAGTTACAAGATAAATAGG+AGG + Chr8:58290211-58290230 None:intergenic 25.0%
! TTATGTTAAAATTGATGAGG+TGG + Chr8:58286781-58286800 None:intergenic 25.0%
! TTCATATTTGCACAAATCAT+CGG + Chr8:58288157-58288176 None:intergenic 25.0%
! TTCTGTTGAATACTGATATT+AGG - Chr8:58290087-58290106 MsG0880045370.01.T01:intron 25.0%
!! AAGATGATTTTGTGTTTGTT+GGG - Chr8:58288826-58288845 MsG0880045370.01.T01:intron 25.0%
!! AAGCATTTTCATTTATCAAC+TGG + Chr8:58288721-58288740 None:intergenic 25.0%
!! AATTCTTTGGAGAAATAATG+CGG - Chr8:58288520-58288539 MsG0880045370.01.T01:intron 25.0%
!! AGCATTTTCATTTATCAACT+GGG + Chr8:58288720-58288739 None:intergenic 25.0%
!! ATTGTGATTTTCAAATATGG+AGG + Chr8:58288393-58288412 None:intergenic 25.0%
!! CAACTTTTGTAATATTCTTC+TGG - Chr8:58291444-58291463 MsG0880045370.01.T01:intron 25.0%
!! TAATTTGGTGACAAATTCTT+TGG - Chr8:58288507-58288526 MsG0880045370.01.T01:intron 25.0%
!! TTGTGATTTTCAAATATGGA+GGG + Chr8:58288392-58288411 None:intergenic 25.0%
!!! ACCTCATCAATTTTAACATA+AGG - Chr8:58286780-58286799 MsG0880045370.01.T01:intron 25.0%
!!! AGAAAAGACATAATGGATTT+AGG - Chr8:58289550-58289569 MsG0880045370.01.T01:intron 25.0%
!!! AGTGGCATTTTTTATATTGT+TGG - Chr8:58291390-58291409 MsG0880045370.01.T01:intron 25.0%
!!! AGTTGATAAATGAAAATGCT+TGG - Chr8:58288720-58288739 MsG0880045370.01.T01:intron 25.0%
!!! ATAAACTCATTGATTCGTTT+AGG + Chr8:58290664-58290683 None:intergenic 25.0%
!!! ATTTTGAAAGACCAATTTAG+GGG - Chr8:58288550-58288569 MsG0880045370.01.T01:intron 25.0%
!!! CCTTTTAGTTATGTTTTTCT+GGG - Chr8:58287996-58288015 MsG0880045370.01.T01:intron 25.0%
!!! CGAAAAGTGTCAAAATAAAA+AGG + Chr8:58291781-58291800 None:intergenic 25.0%
!!! CTATTTTGAAAGACCAATTT+AGG - Chr8:58288548-58288567 MsG0880045370.01.T01:intron 25.0%
!!! CTTTTAGTTATGTTTTTCTG+GGG - Chr8:58287997-58288016 MsG0880045370.01.T01:intron 25.0%
!!! TATTGACTCCACATTAAAAA+GGG + Chr8:58286721-58286740 None:intergenic 25.0%
!!! TGTGTATTTTGTTTGTCATT+TGG - Chr8:58290373-58290392 MsG0880045370.01.T01:CDS 25.0%
!!! TGTTTTTGTTGTTATTGTGT+AGG - Chr8:58287733-58287752 MsG0880045370.01.T01:intron 25.0%
!!! TTATATTTTTGATGCCACAA+AGG - Chr8:58290912-58290931 MsG0880045370.01.T01:intron 25.0%
!!! TTATTGACTCCACATTAAAA+AGG + Chr8:58286722-58286741 None:intergenic 25.0%
AAAAAAGCAAATATTGGGAC+TGG + Chr8:58291006-58291025 None:intergenic 30.0%
AATGTCTTGTCTATGATTCT+AGG - Chr8:58286481-58286500 MsG0880045370.01.T01:CDS 30.0%
AGACATTAAATTTGAGCTAC+AGG + Chr8:58286468-58286487 None:intergenic 30.0%
AGGAATGTGAAACATTGAAA+AGG - Chr8:58290031-58290050 MsG0880045370.01.T01:intron 30.0%
AGTTTAATATGATTCAGTGG+TGG - Chr8:58289169-58289188 MsG0880045370.01.T01:intron 30.0%
ATAACTAACTAACTCCATAG+TGG + Chr8:58288363-58288382 None:intergenic 30.0%
ATAAGTTTCAACTATAAGCC+AGG + Chr8:58288791-58288810 None:intergenic 30.0%
ATGCATATATGCTCAATAAG+GGG + Chr8:58290708-58290727 None:intergenic 30.0%
ATTCCATTTGACATATAAGG+TGG + Chr8:58291929-58291948 None:intergenic 30.0%
CAATGCATATATGCTCAATA+AGG + Chr8:58290710-58290729 None:intergenic 30.0%
CATGAAATACACCAATTGTT+AGG - Chr8:58290011-58290030 MsG0880045370.01.T01:intron 30.0%
CCCAGAAAAACATAACTAAA+AGG + Chr8:58287999-58288018 None:intergenic 30.0%
CTATCATTAACATTCTGCAT+CGG - Chr8:58290595-58290614 MsG0880045370.01.T01:intron 30.0%
CTCAAAAGAGAAATTAGTTC+AGG + Chr8:58290269-58290288 None:intergenic 30.0%
CTGATTCCATTTGACATATA+AGG + Chr8:58291932-58291951 None:intergenic 30.0%
GACAAACAAAATACACATTG+AGG + Chr8:58290370-58290389 None:intergenic 30.0%
GACAGTTTAATATGATTCAG+TGG - Chr8:58289166-58289185 MsG0880045370.01.T01:intron 30.0%
GATGCAGAATGTTAATGATA+GGG + Chr8:58290596-58290615 None:intergenic 30.0%
GATTAGTGAGCGTATAATTT+AGG - Chr8:58289664-58289683 MsG0880045370.01.T01:intron 30.0%
GGAGTCAATAAGATTTCAAT+TGG - Chr8:58286731-58286750 MsG0880045370.01.T01:intron 30.0%
GTGATAAATATGGTTAAGCT+AGG + Chr8:58291603-58291622 None:intergenic 30.0%
GTTCTTAAGAGTTAAGAAGA+AGG + Chr8:58288613-58288632 None:intergenic 30.0%
TAAGTTTCAACTATAAGCCA+GGG + Chr8:58288790-58288809 None:intergenic 30.0%
TACAAACCTTTGCAATTATC+TGG - Chr8:58286435-58286454 MsG0880045370.01.T01:CDS 30.0%
TATCATTAACATTCTGCATC+GGG - Chr8:58290596-58290615 MsG0880045370.01.T01:intron 30.0%
TGAGCAAATTCTATGTCTAA+TGG - Chr8:58288258-58288277 MsG0880045370.01.T01:CDS 30.0%
TGTTTCACATTCCTAACAAT+TGG + Chr8:58290025-58290044 None:intergenic 30.0%
TTATGATTACTTACGGAAGA+GGG + Chr8:58287382-58287401 None:intergenic 30.0%
TTTATGATTACTTACGGAAG+AGG + Chr8:58287383-58287402 None:intergenic 30.0%
! AAGGTTTGTAAGAGTCATTT+TGG + Chr8:58286425-58286444 None:intergenic 30.0%
! ACCTCAAATACTTTTGTAGA+AGG + Chr8:58289204-58289223 None:intergenic 30.0%
! AGAATAGAGTGAAAGTGTAT+AGG + Chr8:58287329-58287348 None:intergenic 30.0%
! CAAATGTGTCTTTTGTTAGT+TGG - Chr8:58290400-58290419 MsG0880045370.01.T01:CDS 30.0%
! CAAGATGATTTTGTGTTTGT+TGG - Chr8:58288825-58288844 MsG0880045370.01.T01:intron 30.0%
! CTCAGAACTAATTTAACTTC+TGG - Chr8:58287353-58287372 MsG0880045370.01.T01:intron 30.0%
! CTTTTGTAATATTCTTCTGG+AGG - Chr8:58291447-58291466 MsG0880045370.01.T01:intron 30.0%
! GTAATTTGCACATCAATATG+TGG + Chr8:58288864-58288883 None:intergenic 30.0%
! GTTAATGATAGGGTATTTCT+AGG + Chr8:58290586-58290605 None:intergenic 30.0%
! GTTTGCCATAATTTTCTACA+GGG + Chr8:58286699-58286718 None:intergenic 30.0%
! TAGATCTTTAGGGACTAATT+TGG - Chr8:58288492-58288511 MsG0880045370.01.T01:intron 30.0%
! TCGTTTAGGTTATAACACAA+GGG + Chr8:58290650-58290669 None:intergenic 30.0%
! TGGTCTTTCATTTGTTAGTT+TGG - Chr8:58290425-58290444 MsG0880045370.01.T01:CDS 30.0%
! TGGTTTGAAATCAGAAAGAA+CGG + Chr8:58291358-58291377 None:intergenic 30.0%
! TTCGTTTAGGTTATAACACA+AGG + Chr8:58290651-58290670 None:intergenic 30.0%
! TTTTGTAATGTAGGCAACTT+TGG - Chr8:58289861-58289880 MsG0880045370.01.T01:CDS 30.0%
!! AAACTTTAGAGTCTAGACAA+TGG + Chr8:58289121-58289140 None:intergenic 30.0%
!! AAGATTTTTAACTCGACTCT+TGG - Chr8:58291857-58291876 MsG0880045370.01.T01:intron 30.0%
!! AGATTTTTAACTCGACTCTT+GGG - Chr8:58291858-58291877 MsG0880045370.01.T01:intron 30.0%
!! CAGGAACTTGATTTTAATGT+TGG + Chr8:58286565-58286584 None:intergenic 30.0%
!! CCCTTTTAGTTATGTTTTTC+TGG - Chr8:58287995-58288014 MsG0880045370.01.T01:intron 30.0%
!! TCCTTCTACAAAAGTATTTG+AGG - Chr8:58289200-58289219 MsG0880045370.01.T01:intron 30.0%
!! TGAGTTGAGTTGAGTAATTA+TGG - Chr8:58287014-58287033 MsG0880045370.01.T01:CDS 30.0%
!! TTATGTTTTTCTGGGGAATT+TGG - Chr8:58288004-58288023 MsG0880045370.01.T01:intron 30.0%
!! TTCTGGAATAGCTGTAATAT+AGG - Chr8:58289906-58289925 MsG0880045370.01.T01:intron 30.0%
!! TTTTTCTACATACTGATTGC+TGG + Chr8:58286661-58286680 None:intergenic 30.0%
!!! ATGTTGTTTTTAACTGCAGT+TGG - Chr8:58287693-58287712 MsG0880045370.01.T01:intron 30.0%
!!! TTTTGTTGTTATTGTGTAGG+TGG - Chr8:58287736-58287755 MsG0880045370.01.T01:intron 30.0%
AAGATAAATAGGAGGGTTCA+AGG + Chr8:58290203-58290222 None:intergenic 35.0%
AAGGATAGAAGAGCAAAACA+AGG - Chr8:58286171-58286190 MsG0880045370.01.T01:CDS 35.0%
ACCTGTGTCAAACTCAAAAT+CGG + Chr8:58289234-58289253 None:intergenic 35.0%
ACTTGAAGAAGAAAACTGCA+TGG + Chr8:58288893-58288912 None:intergenic 35.0%
AGAAGAAAGGGATCTCTAAA+TGG + Chr8:58289303-58289322 None:intergenic 35.0%
AGATAAATAGGAGGGTTCAA+GGG + Chr8:58290202-58290221 None:intergenic 35.0%
CACACTTTCAAGGAACAAAA+GGG + Chr8:58290299-58290318 None:intergenic 35.0%
CACATCAATATGTGGTTTCT+TGG + Chr8:58288856-58288875 None:intergenic 35.0%
CGATGCAGAATGTTAATGAT+AGG + Chr8:58290597-58290616 None:intergenic 35.0%
CTAATTCTGCAGAATGACAA+TGG + Chr8:58291680-58291699 None:intergenic 35.0%
CTGGATATTGCAAATTTGGA+TGG - Chr8:58287761-58287780 MsG0880045370.01.T01:intron 35.0%
CTTCCACCTTATATGTCAAA+TGG - Chr8:58291923-58291942 MsG0880045370.01.T01:intron 35.0%
GACATCTCATCACATGTTTA+GGG - Chr8:58290520-58290539 MsG0880045370.01.T01:intron 35.0%
GAGTGAGTCAAATAAACCAA+AGG + Chr8:58287169-58287188 None:intergenic 35.0%
GCAAGAGATATATGTTAAGC+AGG + Chr8:58289992-58290011 None:intergenic 35.0%
GTCAAATAAACCAAAGGACT+AGG + Chr8:58287163-58287182 None:intergenic 35.0%
TAAATGGTAAAGTGATGCGA+AGG - Chr8:58290743-58290762 MsG0880045370.01.T01:intron 35.0%
TAAGATTTGGATCTGAGTGT+TGG - Chr8:58289486-58289505 MsG0880045370.01.T01:intron 35.0%
TACCATGTATGTCCTTATGT+AGG + Chr8:58288460-58288479 None:intergenic 35.0%
TATGCTGCAAATCAAACTTC+TGG - Chr8:58289889-58289908 MsG0880045370.01.T01:intron 35.0%
TCACACTTTCAAGGAACAAA+AGG + Chr8:58290300-58290319 None:intergenic 35.0%
TCAGAAATGAGGTCTATTTC+TGG + Chr8:58286507-58286526 None:intergenic 35.0%
TGAAATTCTGCTTCGTATGA+TGG + Chr8:58286341-58286360 None:intergenic 35.0%
TGACATCTCATCACATGTTT+AGG - Chr8:58290519-58290538 MsG0880045370.01.T01:intron 35.0%
TGGAAACGCCAATATATACT+AGG - Chr8:58288047-58288066 MsG0880045370.01.T01:intron 35.0%
TGTCGAAGCCTAGTATATAT+TGG + Chr8:58288058-58288077 None:intergenic 35.0%
TGTGTTAAGGATCAAGATCA+GGG + Chr8:58289600-58289619 None:intergenic 35.0%
TTAAGAAGAAGGCCATCAAT+GGG + Chr8:58288602-58288621 None:intergenic 35.0%
TTGCATCTGAGCATATAAAG+TGG - Chr8:58291804-58291823 MsG0880045370.01.T01:intron 35.0%
! AATACTCCTAAAGAGGTACA+AGG + Chr8:58289577-58289596 None:intergenic 35.0%
! ATACAGTAGCAATTGAGTTG+TGG - Chr8:58288192-58288211 MsG0880045370.01.T01:intron 35.0%
! ATGGCAAACCCTTTTTAATG+TGG - Chr8:58286710-58286729 MsG0880045370.01.T01:intron 35.0%
! CTAATAGTCGTGTGATTTTG+AGG + Chr8:58287208-58287227 None:intergenic 35.0%
! CTGTTTTCATGTAACCAACA+AGG + Chr8:58291064-58291083 None:intergenic 35.0%
! GGTTTGCCATAATTTTCTAC+AGG + Chr8:58286700-58286719 None:intergenic 35.0%
! GTGTCTTTTGTTAGTTGGTT+TGG - Chr8:58290405-58290424 MsG0880045370.01.T01:CDS 35.0%
! GTTTAGGACTGTTGTCTTAT+CGG - Chr8:58291716-58291735 MsG0880045370.01.T01:intron 35.0%
! GTTTTGCATACATGATCATC+AGG - Chr8:58289137-58289156 MsG0880045370.01.T01:intron 35.0%
! TAGCAATTGAGTTGTGGAAA+GGG - Chr8:58288198-58288217 MsG0880045370.01.T01:intron 35.0%
! TGTCTTTTGCATCAGAAATG+AGG + Chr8:58286518-58286537 None:intergenic 35.0%
! TTTAGGACTGTTGTCTTATC+GGG - Chr8:58291717-58291736 MsG0880045370.01.T01:intron 35.0%
! TTTAGGTTATAACACAAGGG+CGG + Chr8:58290647-58290666 None:intergenic 35.0%
! TTTTTGGATGCATTTCCATG+TGG - Chr8:58288667-58288686 MsG0880045370.01.T01:intron 35.0%
!! AAGCTGTGTTAAGTTGAATG+TGG - Chr8:58291028-58291047 MsG0880045370.01.T01:intron 35.0%
!! ATTTTAGTGAAGCCCATTGA+TGG - Chr8:58288587-58288606 MsG0880045370.01.T01:intron 35.0%
!! ATTTTGAGGAGTATATCAGG+AGG + Chr8:58287194-58287213 None:intergenic 35.0%
!! GAATTTGGTTTGCAGGAATT+TGG - Chr8:58288019-58288038 MsG0880045370.01.T01:intron 35.0%
!! GAGTAGTTAGCTTGTTAGTT+AGG + Chr8:58290239-58290258 None:intergenic 35.0%
!! GGTTCTGGATATTGCAAATT+TGG - Chr8:58287757-58287776 MsG0880045370.01.T01:intron 35.0%
!! GTGATTTTGAGGAGTATATC+AGG + Chr8:58287197-58287216 None:intergenic 35.0%
!! TTTGCAGGAATTTGGTAATG+TGG - Chr8:58288027-58288046 MsG0880045370.01.T01:intron 35.0%
!! TTTTGTTCCTTGAAAGTGTG+AGG - Chr8:58290299-58290318 MsG0880045370.01.T01:intron 35.0%
!!! ACCAGGTAGCATATTTTAGT+GGG - Chr8:58289422-58289441 MsG0880045370.01.T01:intron 35.0%
!!! CATTTTTTCGCAACTGTCTA+TGG - Chr8:58288076-58288095 MsG0880045370.01.T01:intron 35.0%
!!! GTGTCGTTTAAGCATGTTTT+TGG - Chr8:58287500-58287519 MsG0880045370.01.T01:intron 35.0%
!!! TTAAGCATGTTTTTGGTCAC+CGG - Chr8:58287507-58287526 MsG0880045370.01.T01:intron 35.0%
AAAATTACCACGTGCCATAG+TGG - Chr8:58287615-58287634 MsG0880045370.01.T01:intron 40.0%
AAACCCTTCAGTCCTACATA+AGG - Chr8:58288445-58288464 MsG0880045370.01.T01:intron 40.0%
AAATTGATGAGGTGGAGTCT+TGG + Chr8:58286773-58286792 None:intergenic 40.0%
AACGGAAGTGAAAAGGTAAC+AGG + Chr8:58291340-58291359 None:intergenic 40.0%
AATTAGCAAGTGGCAGTGAT+TGG - Chr8:58291694-58291713 MsG0880045370.01.T01:intron 40.0%
ACCCTCCCTGTAGAAAATTA+TGG - Chr8:58286691-58286710 MsG0880045370.01.T01:intron 40.0%
AGGGAAGTTTACACTCTCAA+AGG - Chr8:58291158-58291177 MsG0880045370.01.T01:intron 40.0%
AGTTTACACTCTCAAAGGAG+CGG - Chr8:58291163-58291182 MsG0880045370.01.T01:intron 40.0%
ATCAGGGAATACTCCTAAAG+AGG + Chr8:58289584-58289603 None:intergenic 40.0%
ATGTCCTTATGTAGGACTGA+AGG + Chr8:58288452-58288471 None:intergenic 40.0%
ATTGGTTAAGGTTTGCCACA+TGG + Chr8:58288685-58288704 None:intergenic 40.0%
CAAACATTGTCGCACGAAAT+AGG + Chr8:58287659-58287678 None:intergenic 40.0%
CAAATTTGGATGGAGCAAAG+AGG - Chr8:58287771-58287790 MsG0880045370.01.T01:intron 40.0%
CAGAAAGAACGGAAGTGAAA+AGG + Chr8:58291347-58291366 None:intergenic 40.0%
CATATATGCTCAATAAGGGG+AGG + Chr8:58290705-58290724 None:intergenic 40.0%
CATTCTGCAGAATTAGCAAG+TGG - Chr8:58291684-58291703 MsG0880045370.01.T01:intron 40.0%
CGACAATGTTTGTGCTTCAT+AGG - Chr8:58287667-58287686 MsG0880045370.01.T01:intron 40.0%
CTAACTCCATAGTGGCATAA+TGG + Chr8:58288355-58288374 None:intergenic 40.0%
CTGTGTTAAGGATCAAGATC+AGG + Chr8:58289601-58289620 None:intergenic 40.0%
GACTGAGTAAACCCCTAAAT+TGG + Chr8:58288564-58288583 None:intergenic 40.0%
GAGAATACGGAACTGTGTTA+AGG + Chr8:58289613-58289632 None:intergenic 40.0%
GAGTGTAAACTTCCCTTCAA+CGG + Chr8:58291154-58291173 None:intergenic 40.0%
GTCCTACATAAGGACATACA+TGG - Chr8:58288455-58288474 MsG0880045370.01.T01:intron 40.0%
GTTAAGAAGAAGGCCATCAA+TGG + Chr8:58288603-58288622 None:intergenic 40.0%
TAAATTACCACTATGGCACG+TGG + Chr8:58287625-58287644 None:intergenic 40.0%
TACTTCAGAGAGGTTAGAGA+AGG - Chr8:58291886-58291905 MsG0880045370.01.T01:intron 40.0%
TAGCTCAGCTTCATAGTCAT+AGG + Chr8:58291103-58291122 None:intergenic 40.0%
TATATGGGTAGTCTGTGTCA+TGG + Chr8:58291832-58291851 None:intergenic 40.0%
TCCCACTAAAATATGCTACC+TGG + Chr8:58289426-58289445 None:intergenic 40.0%
TCTTGATGCTTTGGCTGATT+CGG + Chr8:58289336-58289355 None:intergenic 40.0%
TCTTTGCCATTATGCCACTA+TGG - Chr8:58288346-58288365 MsG0880045370.01.T01:intron 40.0%
TGTCCTTATGTAGGACTGAA+GGG + Chr8:58288451-58288470 None:intergenic 40.0%
TGTCTCAGATAACGAACTCT+GGG - Chr8:58287280-58287299 MsG0880045370.01.T01:intron 40.0%
TGTTATTGTGTAGGTGGTTC+TGG - Chr8:58287742-58287761 MsG0880045370.01.T01:intron 40.0%
TTAGGTCCTTGTACCTCTTT+AGG - Chr8:58289568-58289587 MsG0880045370.01.T01:intron 40.0%
TTGGGTCATATACTTCAGAG+AGG - Chr8:58291876-58291895 MsG0880045370.01.T01:intron 40.0%
TTGTCTCAGATAACGAACTC+TGG - Chr8:58287279-58287298 MsG0880045370.01.T01:intron 40.0%
! AGGAGATGATGTGATGATGA+TGG + Chr8:58287143-58287162 None:intergenic 40.0%
! ATTTCCAATTGTATTGGCGG+TGG - Chr8:58286927-58286946 MsG0880045370.01.T01:intron 40.0%
! CATCATTTGAAGCCGTTGAA+GGG - Chr8:58291139-58291158 MsG0880045370.01.T01:intron 40.0%
! CATGTAACCAACAAGGTATC+AGG + Chr8:58291057-58291076 None:intergenic 40.0%
! GCCATAATTTTCTACAGGGA+GGG + Chr8:58286695-58286714 None:intergenic 40.0%
! GTAGCAATTGAGTTGTGGAA+AGG - Chr8:58288197-58288216 MsG0880045370.01.T01:intron 40.0%
! TAGAGTGAAAGTGTATAGGC+TGG + Chr8:58287325-58287344 None:intergenic 40.0%
! TCGTGATGATGATGAAGAGT+TGG + Chr8:58287115-58287134 None:intergenic 40.0%
! TGATGATGATGAAGAGTTGG+AGG + Chr8:58287112-58287131 None:intergenic 40.0%
! TGCCATAATTTTCTACAGGG+AGG + Chr8:58286696-58286715 None:intergenic 40.0%
! TTGGTTCTTCACAAGTCACA+CGG + Chr8:58286406-58286425 None:intergenic 40.0%
!! ATCTGAGTGTTGGATTTGGA+GGG - Chr8:58289496-58289515 MsG0880045370.01.T01:intron 40.0%
!! CACCAGGTAGCATATTTTAG+TGG - Chr8:58289421-58289440 MsG0880045370.01.T01:intron 40.0%
!! TCTGGAGGCATTCAACTAAT+TGG - Chr8:58291462-58291481 MsG0880045370.01.T01:intron 40.0%
!! TGAGTGATTGTTGTTTCTGC+AGG - Chr8:58288287-58288306 MsG0880045370.01.T01:CDS 40.0%
!! TGGTTTGGTGCAAAGCTTAT+TGG - Chr8:58291986-58292005 MsG0880045370.01.T01:CDS 40.0%
!! TTGATGCCACAAAGGTACTT+GGG - Chr8:58290920-58290939 MsG0880045370.01.T01:intron 40.0%
!! TTGGATCTGAGTGTTGGATT+TGG - Chr8:58289492-58289511 MsG0880045370.01.T01:intron 40.0%
!! TTGTTGTTTCTGCAGGATGA+AGG - Chr8:58288294-58288313 MsG0880045370.01.T01:CDS 40.0%
!! TTTGATGCCACAAAGGTACT+TGG - Chr8:58290919-58290938 MsG0880045370.01.T01:intron 40.0%
!!! TAAGCATGTTTTTGGTCACC+GGG - Chr8:58287508-58287527 MsG0880045370.01.T01:intron 40.0%
AAGCTGCTGTCTTGATGCTT+TGG + Chr8:58289345-58289364 None:intergenic 45.0%
AAGGTAGCAATTCGTCCCAA+TGG + Chr8:58287802-58287821 None:intergenic 45.0%
ACAACAACCGCTTGAGAACT+TGG + Chr8:58288325-58288344 None:intergenic 45.0%
ACATGCTTAAACGACACGTG+TGG + Chr8:58287497-58287516 None:intergenic 45.0%
ACTAACCGTCGATGATACAG+TGG + Chr8:58287546-58287565 None:intergenic 45.0%
AGAGCTTGGCAGCATGTTTA+GGG + Chr8:58287232-58287251 None:intergenic 45.0%
AGCAAAACAAGGTGTGTGCA+TGG - Chr8:58286182-58286201 MsG0880045370.01.T01:CDS 45.0%
AGCAAAGAGGATCGTCCATT+GGG - Chr8:58287784-58287803 MsG0880045370.01.T01:intron 45.0%
ATGGTAAAGTGATGCGAAGG+TGG - Chr8:58290746-58290765 MsG0880045370.01.T01:intron 45.0%
ATGGTCCATACAGAGAGCTA+TGG + Chr8:58291661-58291680 None:intergenic 45.0%
CAAAACAAGGTGTGTGCATG+GGG - Chr8:58286184-58286203 MsG0880045370.01.T01:CDS 45.0%
CAAGCAAAGCTGCTAAAGAG+TGG + Chr8:58291304-58291323 None:intergenic 45.0%
CACATCATCTCCTAGTCCTT+TGG - Chr8:58287150-58287169 MsG0880045370.01.T01:intron 45.0%
CATCACACCTCACACTTTCA+AGG + Chr8:58290309-58290328 None:intergenic 45.0%
CCAAAACTGTCGTCTACACA+CGG + Chr8:58286261-58286280 None:intergenic 45.0%
CTAACCGTCGATGATACAGT+GGG + Chr8:58287545-58287564 None:intergenic 45.0%
GCAAAACAAGGTGTGTGCAT+GGG - Chr8:58286183-58286202 MsG0880045370.01.T01:CDS 45.0%
GGTGAAACCAAGTTCTCAAG+CGG - Chr8:58288315-58288334 MsG0880045370.01.T01:intron 45.0%
GGTGTCTGCAGAAGAAGAAA+GGG + Chr8:58289315-58289334 None:intergenic 45.0%
GTATATGTGTGCCCATACGT+AGG + Chr8:58288949-58288968 None:intergenic 45.0%
TACCTCTTTCAGTGTGCGAA+CGG + Chr8:58290863-58290882 None:intergenic 45.0%
TCAAAGGAGCGGTTTCAAAC+AGG - Chr8:58291174-58291193 MsG0880045370.01.T01:intron 45.0%
TGAAAATACCATGCAGTCCC+TGG - Chr8:58288770-58288789 MsG0880045370.01.T01:intron 45.0%
TGGTAAAGTGATGCGAAGGT+GGG - Chr8:58290747-58290766 MsG0880045370.01.T01:intron 45.0%
TGGTTCTTCACAAGTCACAC+GGG + Chr8:58286405-58286424 None:intergenic 45.0%
! CAAGCATGATTTGTGCGTTG+AGG - Chr8:58286372-58286391 MsG0880045370.01.T01:intron 45.0%
! GCATCATTTGAAGCCGTTGA+AGG - Chr8:58291138-58291157 MsG0880045370.01.T01:intron 45.0%
! GCTTGGAGCACTAAACTTAC+AGG - Chr8:58290785-58290804 MsG0880045370.01.T01:intron 45.0%
! GGGACGAATTGCTACCTTTT+TGG - Chr8:58287804-58287823 MsG0880045370.01.T01:intron 45.0%
! TGATGATGAAGAGTTGGAGG+AGG + Chr8:58287109-58287128 None:intergenic 45.0%
! TTGAGGAGTATATCAGGAGG+AGG + Chr8:58287191-58287210 None:intergenic 45.0%
! TTTTCGCAACTGTCTATGGC+AGG - Chr8:58288080-58288099 MsG0880045370.01.T01:intron 45.0%
!! CAAGTGGCAGTGATTGGTTT+AGG - Chr8:58291700-58291719 MsG0880045370.01.T01:intron 45.0%
!! GATCTGAGTGTTGGATTTGG+AGG - Chr8:58289495-58289514 MsG0880045370.01.T01:intron 45.0%
!! TTCTGGGGAATTTGGTTTGC+AGG - Chr8:58288012-58288031 MsG0880045370.01.T01:intron 45.0%
!!! GCCGATTTTGAGTTTGACAC+AGG - Chr8:58289230-58289249 MsG0880045370.01.T01:intron 45.0%
ACTATAAGCCAGGGACTGCA+TGG + Chr8:58288781-58288800 None:intergenic 50.0%
AGGACTGTTGTCTTATCGGG+AGG - Chr8:58291720-58291739 MsG0880045370.01.T01:intron 50.0%
ATAGGAGGGTTCAAGGGTAG+AGG + Chr8:58290196-58290215 None:intergenic 50.0%
CAGAGCTTGGCAGCATGTTT+AGG + Chr8:58287233-58287252 None:intergenic 50.0%
CCATACAGAGAGCTATGGCA+TGG + Chr8:58291656-58291675 None:intergenic 50.0%
CCATGCCATAGCTCTCTGTA+TGG - Chr8:58291653-58291672 MsG0880045370.01.T01:intron 50.0%
CGGTGTCTGCAGAAGAAGAA+AGG + Chr8:58289316-58289335 None:intergenic 50.0%
GAGCAAAGAGGATCGTCCAT+TGG - Chr8:58287783-58287802 MsG0880045370.01.T01:intron 50.0%
GAGGGTCTGCATGTTTACCA+GGG - Chr8:58291739-58291758 MsG0880045370.01.T01:intron 50.0%
GGAAGTTTACCTGCTAACCC+TGG + Chr8:58291759-58291778 None:intergenic 50.0%
GGACTGTTGTCTTATCGGGA+GGG - Chr8:58291721-58291740 MsG0880045370.01.T01:intron 50.0%
GGTACTTGGGAGGACAAAAG+TGG - Chr8:58290933-58290952 MsG0880045370.01.T01:intron 50.0%
GGTGCAGATACTGCATGGTT+TGG - Chr8:58291971-58291990 MsG0880045370.01.T01:CDS 50.0%
GTGGTTGCCTGATACCTTGT+TGG - Chr8:58291047-58291066 MsG0880045370.01.T01:intron 50.0%
GTTGGAGGAGGAGTTTGTGT+TGG + Chr8:58287097-58287116 None:intergenic 50.0%
TAGGAGGGTTCAAGGGTAGA+GGG + Chr8:58290195-58290214 None:intergenic 50.0%
TATTCCAGCCACGTCTTGCT+GGG - Chr8:58291205-58291224 MsG0880045370.01.T01:intron 50.0%
TCCTCCCACTGTATCATCGA+CGG - Chr8:58287538-58287557 MsG0880045370.01.T01:intron 50.0%
TCTGCCTCGTTTGCAAGTCA+TGG - Chr8:58287249-58287268 MsG0880045370.01.T01:intron 50.0%
TGTCCTCCCAAGTACCTTTG+TGG + Chr8:58290929-58290948 None:intergenic 50.0%
TTATTCCAGCCACGTCTTGC+TGG - Chr8:58291204-58291223 MsG0880045370.01.T01:intron 50.0%
! ATCGCCATGACTTGCAAACG+AGG + Chr8:58287256-58287275 None:intergenic 50.0%
! CCGTGTGTAGACGACAGTTT+TGG - Chr8:58286258-58286277 MsG0880045370.01.T01:CDS 50.0%
! CGTATGATGGTGCACAAACC+AGG + Chr8:58286328-58286347 None:intergenic 50.0%
! GCATGTTTACCAGGGTTAGC+AGG - Chr8:58291747-58291766 MsG0880045370.01.T01:intron 50.0%
! TCCAATTGTATTGGCGGTGG+CGG - Chr8:58286930-58286949 MsG0880045370.01.T01:intron 50.0%
!! ATGCCACAAAGGTACTTGGG+AGG - Chr8:58290923-58290942 MsG0880045370.01.T01:intron 50.0%
!!! CGACAGTTTTGGCTCGACAT+AGG - Chr8:58286269-58286288 MsG0880045370.01.T01:CDS 50.0%
AAAGCTCAGAGCCATCGCTC+TGG - Chr8:58290127-58290146 MsG0880045370.01.T01:CDS 55.0%
AAGGTGGGTGTGGAGGTTGT+TGG - Chr8:58290762-58290781 MsG0880045370.01.T01:intron 55.0%
AAGTGATGCGAAGGTGGGTG+TGG - Chr8:58290752-58290771 MsG0880045370.01.T01:intron 55.0%
ACCGTCGATGATACAGTGGG+AGG + Chr8:58287542-58287561 None:intergenic 55.0%
ACTTACACCCCAGCAAGACG+TGG + Chr8:58291216-58291235 None:intergenic 55.0%
AGAGTCATCCCTCCTCCACA+CGG - Chr8:58291950-58291969 MsG0880045370.01.T01:intron 55.0%
AGGAGGGTTCAAGGGTAGAG+GGG + Chr8:58290194-58290213 None:intergenic 55.0%
AGGTGGGTGTGGAGGTTGTT+GGG - Chr8:58290763-58290782 MsG0880045370.01.T01:intron 55.0%
ATATGCTGGGCGCCTACGTA+TGG - Chr8:58288934-58288953 MsG0880045370.01.T01:intron 55.0%
ATTCCAGCCACGTCTTGCTG+GGG - Chr8:58291206-58291225 MsG0880045370.01.T01:intron 55.0%
CACACGGTGCAGATACTGCA+TGG - Chr8:58291966-58291985 MsG0880045370.01.T01:CDS 55.0%
CACCGTTCGCACACTGAAAG+AGG - Chr8:58290858-58290877 MsG0880045370.01.T01:intron 55.0%
CATGCAGTATCTGCACCGTG+TGG + Chr8:58291968-58291987 None:intergenic 55.0%
CTTGCAAACGAGGCAGAGCT+TGG + Chr8:58287246-58287265 None:intergenic 55.0%
GGAGGAGGAGTTTGTGTTGG+TGG + Chr8:58287094-58287113 None:intergenic 55.0%
GGAGGGTCTGCATGTTTACC+AGG - Chr8:58291738-58291757 MsG0880045370.01.T01:intron 55.0%
TATCTGCACCGTGTGGAGGA+GGG + Chr8:58291961-58291980 None:intergenic 55.0%
TATGCTGGGCGCCTACGTAT+GGG - Chr8:58288935-58288954 MsG0880045370.01.T01:intron 55.0%
TGGCAGGTGCGAGTCATTCT+TGG - Chr8:58288096-58288115 MsG0880045370.01.T01:intron 55.0%
! CCAATTGTATTGGCGGTGGC+GGG - Chr8:58286931-58286950 MsG0880045370.01.T01:intron 55.0%
! CTGCTGTTTGTGCTCTCACC+AGG - Chr8:58289405-58289424 MsG0880045370.01.T01:intron 55.0%
! CTGGTGAGAGCACAAACAGC+AGG + Chr8:58289407-58289426 None:intergenic 55.0%
! GGAGGAGTTTGTGTTGGTGG+TGG + Chr8:58287091-58287110 None:intergenic 55.0%
!! GTGGAGTCTTGGTGATGACG+TGG + Chr8:58286762-58286781 None:intergenic 55.0%
AAACCAGGTCCCAGGGTGCA+TGG + Chr8:58286313-58286332 None:intergenic 60.0%
AACCAGGTCCCAGGGTGCAT+GGG + Chr8:58286312-58286331 None:intergenic 60.0%
CCCGCCACCGCCAATACAAT+TGG + Chr8:58286934-58286953 None:intergenic 60.0%
GAGGGTTCAAGGGTAGAGGG+GGG + Chr8:58290192-58290211 None:intergenic 60.0%
GCAGTATCTGCACCGTGTGG+AGG + Chr8:58291965-58291984 None:intergenic 60.0%
GGAGGGTTCAAGGGTAGAGG+GGG + Chr8:58290193-58290212 None:intergenic 60.0%
GGTGCACAAACCAGGTCCCA+GGG + Chr8:58286320-58286339 None:intergenic 60.0%
GGTGTGGAGGTTGTTGGGCT+TGG - Chr8:58290768-58290787 MsG0880045370.01.T01:intron 60.0%
GTATCTGCACCGTGTGGAGG+AGG + Chr8:58291962-58291981 None:intergenic 60.0%
TGATGCGAAGGTGGGTGTGG+AGG - Chr8:58290755-58290774 MsG0880045370.01.T01:intron 60.0%
TGGTGCACAAACCAGGTCCC+AGG + Chr8:58286321-58286340 None:intergenic 60.0%
!! GCGATGGCTCTGAGCTTTCG+AGG + Chr8:58290125-58290144 None:intergenic 60.0%
AACCCATGCACCCTGGGACC+TGG - Chr8:58286307-58286326 MsG0880045370.01.T01:intron 65.0%
ACACCCCAGCAAGACGTGGC+TGG + Chr8:58291212-58291231 None:intergenic 65.0%
AGCGCACAACCCATGCACCC+TGG - Chr8:58286300-58286319 MsG0880045370.01.T01:intron 65.0%
CAGTGGGAGGAAGTCGCTCC+CGG + Chr8:58287529-58287548 None:intergenic 65.0%
GCGCACAACCCATGCACCCT+GGG - Chr8:58286301-58286320 MsG0880045370.01.T01:intron 65.0%
!! CGGTGGCGGGTAGTGGTCAA+TGG - Chr8:58286944-58286963 MsG0880045370.01.T01:intron 65.0%
!! GTATTGGCGGTGGCGGGTAG+TGG - Chr8:58286937-58286956 MsG0880045370.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 58286157 58292036 58286157 ID=MsG0880045370.01;Name=MsG0880045370.01
Chr8 mRNA 58286157 58292036 58286157 ID=MsG0880045370.01.T01;Parent=MsG0880045370.01;Name=MsG0880045370.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0.5|0.44|0.88|0.25|0.33|9|0|305
Chr8 exon 58291966 58292036 58291966 ID=MsG0880045370.01.T01:exon:24814;Parent=MsG0880045370.01.T01
Chr8 exon 58290634 58290724 58290634 ID=MsG0880045370.01.T01:exon:24813;Parent=MsG0880045370.01.T01
Chr8 exon 58290368 58290466 58290368 ID=MsG0880045370.01.T01:exon:24812;Parent=MsG0880045370.01.T01
Chr8 exon 58290092 58290159 58290092 ID=MsG0880045370.01.T01:exon:24811;Parent=MsG0880045370.01.T01
Chr8 exon 58289820 58289884 58289820 ID=MsG0880045370.01.T01:exon:24810;Parent=MsG0880045370.01.T01
Chr8 exon 58288219 58288319 58288219 ID=MsG0880045370.01.T01:exon:24809;Parent=MsG0880045370.01.T01
Chr8 exon 58286964 58287109 58286964 ID=MsG0880045370.01.T01:exon:24808;Parent=MsG0880045370.01.T01
Chr8 exon 58286425 58286558 58286425 ID=MsG0880045370.01.T01:exon:24807;Parent=MsG0880045370.01.T01
Chr8 exon 58286157 58286299 58286157 ID=MsG0880045370.01.T01:exon:24806;Parent=MsG0880045370.01.T01
Chr8 CDS 58291966 58292036 58291966 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58290634 58290724 58290634 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58290368 58290466 58290368 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58290092 58290159 58290092 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58289820 58289884 58289820 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58288219 58288319 58288219 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58286964 58287109 58286964 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58286425 58286558 58286425 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Chr8 CDS 58286157 58286299 58286157 ID=MsG0880045370.01.T01:cds;Parent=MsG0880045370.01.T01
Gene Sequence

>MsG0880045370.01.T01

ATGATCAAAAGTGCAAGGATAGAAGAGCAAAACAAGGTGTGTGCATGGGGAAGCACGATCCGTGTGCATAAAATCTTTGATACTCATACGACAACGCCACACGTGTCGTTTAAGCATGTTTTTGGTCACCGGGAGCGACTTCCTCCCACTGTATCATCGACGTTTGTTTGTTTTTGTTGTTATTGTGTAGGTGGTTCTGGATATTGCAAATTTGGATGGAGCAAAGAGGATCGTCCATTGGGACGAATTGCTACCTTTTTGGAATTTGGTAATGTGGAAACGCCAATATATACTAGGCTTCGACATTTTTTCGCAACTGTCTATGGCAGGATGAAGGTGAAACCAAGTTCTCAAGCGGTTGTTGTTTCTTTGCCATTATGCCACTATGGAGTTAGCAACTTTGGCTCTGTATGCTGCAAATCAAACTTCTGGAATAGCTGTAATATAGGCTTTCAAGTTACATCTGTAGTTCCAAGTATGTTTTATGATTTTGCTAAGCTATGCTATGTTGCCTATGACTATGAAGCTGAGCTATTGAAAGATACACATGCATCATTTGAAGCCGTTGAAGGGAAGTTTACACTCTCAAAGGAGCGGTTTCAAACAGGAGAGATTTTATTCCAGCCACGTCTTGCTGGGGTGCGAGCAATGAGTTTGCACCATGCCATAGCTCTCTGTATGGACCATTGTCATTCTGCAGAATTAGCAAGTGGCAGTGATTGGTTTAGGACTGTTGTCTTATCGGGAGGGTCTGCATGTTTACCAGGGTTAGCAGAGAGGTTAGAGAAGGAACTTCATTCATTACTTCCACCTTATATGTCAAATGGAATCAGAGTCATCCCTCCTCCACACGGTGCAGATACTGCATGGTTTGGTGCAAAGCTTATTGGCAGTGTGAGCTATCCACTTAACTCTTAA
Protein sequence

>MsG0880045370.01.T01

MIKSARIEEQNKVCAWGSTIRVHKIFDTHTTTPHVSFKHVFGHRERLPPTVSSTFVCFCCYCVGGSGYCKFGWSKEDRPLGRIATFLEFGNVETPIYTRLRHFFATVYGRMKVKPSSQAVVVSLPLCHYGVSNFGSVCCKSNFWNSCNIGFQVTSVVPSMFYDFAKLCYVAYDYEAELLKDTHASFEAVEGKFTLSKERFQTGEILFQPRLAGVRAMSLHHAIALCMDHCHSAELASGSDWFRTVVLSGGSACLPGLAERLEKELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVSYPLNS*