Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044835.01.T01 | XP_013445800.1 | 99.023 | 307 | 3 | 0 | 1 | 307 | 19 | 325 | 0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044835.01.T01 | P49730 | 83.28 | 311 | 48 | 2 | 1 | 307 | 19 | 329 | 0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044835.01.T01 | A0A072TRK2 | 99.023 | 307 | 3 | 0 | 1 | 307 | 19 | 325 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048781.01 | MsG0880044835.01 | 0.829132 | 6.108074e-55 | 6.195522e-52 |
| MsG0180000111.01 | MsG0880044835.01 | 0.803617 | 3.200108e-49 | 1.615548e-46 |
| MsG0180000348.01 | MsG0880044835.01 | 0.804267 | 2.345375e-49 | 1.203926e-46 |
| MsG0180002429.01 | MsG0880044835.01 | 0.812776 | 3.576324e-51 | 2.294088e-48 |
| MsG0880044835.01 | MsG0880046208.01 | 0.839278 | 1.744012e-57 | 2.396514e-54 |
| MsG0880044835.01 | MsG0880046646.01 | 0.833299 | 5.776628e-56 | 6.625083e-53 |
| MsG0880044835.01 | MsG0880046885.01 | 0.857026 | 2.159755e-62 | 5.256612e-59 |
| MsG0880044835.01 | MsG0880047226.01 | 0.805031 | 1.624493e-49 | 8.504770e-47 |
| MsG0880044835.01 | MsG0880047640.01 | 0.800694 | 1.277919e-48 | 5.989003e-46 |
| MsG0180003485.01 | MsG0880044835.01 | 0.824688 | 7.048713e-54 | 6.289403e-51 |
| MsG0180003796.01 | MsG0880044835.01 | 0.828981 | 6.644713e-55 | 6.709037e-52 |
| MsG0180004126.01 | MsG0880044835.01 | 0.802723 | 4.899350e-49 | 2.417554e-46 |
| MsG0180006133.01 | MsG0880044835.01 | 0.817150 | 3.828104e-52 | 2.765939e-49 |
| MsG0780040307.01 | MsG0880044835.01 | 0.804301 | 2.307176e-49 | 1.185403e-46 |
| MsG0780040533.01 | MsG0880044835.01 | 0.812157 | 4.882447e-51 | 3.080985e-48 |
| MsG0780040620.01 | MsG0880044835.01 | 0.837144 | 6.181571e-57 | 7.957362e-54 |
| MsG0780041063.01 | MsG0880044835.01 | 0.811989 | 5.313594e-51 | 3.337584e-48 |
| MsG0780041132.01 | MsG0880044835.01 | 0.815402 | 9.418480e-52 | 6.487085e-49 |
| MsG0780041141.01 | MsG0880044835.01 | 0.806282 | 8.874662e-50 | 4.797759e-47 |
| MsG0780041143.01 | MsG0880044835.01 | 0.849911 | 2.386420e-60 | 4.595045e-57 |
| MsG0780041340.01 | MsG0880044835.01 | 0.838083 | 3.549222e-57 | 4.702282e-54 |
| MsG0280010579.01 | MsG0880044835.01 | 0.812781 | 3.567149e-51 | 2.288505e-48 |
| MsG0280011154.01 | MsG0880044835.01 | 0.810128 | 1.344480e-50 | 8.038585e-48 |
| MsG0380012788.01 | MsG0880044835.01 | 0.820776 | 5.735221e-53 | 4.580686e-50 |
| MsG0380012808.01 | MsG0880044835.01 | 0.821413 | 4.091387e-53 | 3.326274e-50 |
| MsG0680031701.01 | MsG0880044835.01 | 0.803098 | 4.098723e-49 | 2.041711e-46 |
| MsG0680032773.01 | MsG0880044835.01 | 0.817444 | 3.287756e-52 | 2.394771e-49 |
| MsG0480018785.01 | MsG0880044835.01 | 0.813065 | 3.091044e-51 | 1.998122e-48 |
| MsG0480020965.01 | MsG0880044835.01 | 0.823819 | 1.128068e-53 | 9.818913e-51 |
| MsG0480021013.01 | MsG0880044835.01 | 0.811835 | 5.738707e-51 | 3.589675e-48 |
| MsG0480022982.01 | MsG0880044835.01 | 0.829522 | 4.911305e-55 | 5.038869e-52 |
| MsG0480022991.01 | MsG0880044835.01 | 0.806162 | 9.404027e-50 | 5.068682e-47 |
| MsG0480023194.01 | MsG0880044835.01 | 0.830169 | 3.416357e-55 | 3.571656e-52 |
| MsG0480023262.01 | MsG0880044835.01 | 0.815016 | 1.147161e-51 | 7.818455e-49 |
| MsG0480023296.01 | MsG0880044835.01 | 0.858008 | 1.106413e-62 | 2.783402e-59 |
| MsG0480023672.01 | MsG0880044835.01 | 0.844808 | 6.009165e-59 | 9.815816e-56 |
| MsG0580024489.01 | MsG0880044835.01 | 0.813471 | 2.517317e-51 | 1.645472e-48 |
| MsG0580024787.01 | MsG0880044835.01 | 0.850093 | 2.121869e-60 | 4.109876e-57 |
| MsG0580024813.01 | MsG0880044835.01 | 0.838838 | 2.267140e-57 | 3.073787e-54 |
| MsG0580025177.01 | MsG0880044835.01 | 0.823929 | 1.062981e-53 | 9.280735e-51 |
| MsG0580025775.01 | MsG0880044835.01 | 0.823721 | 1.189106e-53 | 1.032249e-50 |
| MsG0380017164.01 | MsG0880044835.01 | 0.827808 | 1.275313e-54 | 1.244401e-51 |
| MsG0380017361.01 | MsG0880044835.01 | 0.841974 | 3.431506e-58 | 5.127329e-55 |
| MsG0580026142.01 | MsG0880044835.01 | 0.805361 | 1.385362e-49 | 7.314965e-47 |
| MsG0580028756.01 | MsG0880044835.01 | 0.847484 | 1.123356e-59 | 1.999644e-56 |
| MsG0580028923.01 | MsG0880044835.01 | 0.804862 | 1.762023e-49 | 9.185603e-47 |
| MsG0580029123.01 | MsG0880044835.01 | 0.810239 | 1.272600e-50 | 7.630886e-48 |
| MsG0580029261.01 | MsG0880044835.01 | 0.851060 | 1.134720e-60 | 2.268437e-57 |
| MsG0280006540.01 | MsG0880044835.01 | 0.870634 | 1.257966e-66 | 4.927741e-63 |
| MsG0280006563.01 | MsG0880044835.01 | 0.839224 | 1.800855e-57 | 2.470714e-54 |
| MsG0280007359.01 | MsG0880044835.01 | 0.835604 | 1.522958e-56 | 1.871620e-53 |
| MsG0680035878.01 | MsG0880044835.01 | 0.845508 | 3.888669e-59 | 6.494896e-56 |
| MsG0780037158.01 | MsG0880044835.01 | 0.900000 | 1.134207e-77 | 1.437616e-73 |
| MsG0780039861.01 | MsG0880044835.01 | 0.845558 | 3.768180e-59 | 6.303752e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044835.01.T01 | MTR_8g469010 | 99.023 | 307 | 3 | 0 | 1 | 307 | 19 | 325 | 0.0 | 629 |
| MsG0880044835.01.T01 | MTR_0268s0080 | 91.667 | 312 | 21 | 1 | 1 | 307 | 19 | 330 | 0.0 | 590 |
| MsG0880044835.01.T01 | MTR_1g050472 | 91.987 | 312 | 20 | 1 | 1 | 307 | 19 | 330 | 0.0 | 590 |
| MsG0880044835.01.T01 | MTR_7g029110 | 91.346 | 312 | 22 | 1 | 1 | 307 | 19 | 330 | 0.0 | 568 |
| MsG0880044835.01.T01 | MTR_4g117370 | 77.170 | 311 | 67 | 1 | 1 | 307 | 31 | 341 | 0.0 | 512 |
| MsG0880044835.01.T01 | MTR_6g005270 | 69.767 | 43 | 13 | 0 | 247 | 289 | 25 | 67 | 2.18e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044835.01.T01 | AT3G23580 | 77.492 | 311 | 66 | 1 | 1 | 307 | 31 | 341 | 0.0 | 505 |
| MsG0880044835.01.T01 | AT3G27060 | 80.573 | 314 | 54 | 3 | 1 | 307 | 19 | 332 | 1.06e-179 | 499 |
Find 55 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGATTTGATTTCGCTTC+AGG | 0.266722 | 8:-49939833 | MsG0880044835.01.T01:CDS |
| TCCGAAGCGCGTGCTTTCTA+TGG | 0.277078 | 8:-49940411 | MsG0880044835.01.T01:CDS |
| CACTTCCTTGCGCGTTGGTT+GGG | 0.285926 | 8:-49939960 | MsG0880044835.01.T01:CDS |
| ATTTCTTTGAGAAGCGCGTT+GGG | 0.337568 | 8:-49939801 | MsG0880044835.01.T01:CDS |
| AAGCTGATTGGGCTTTGAAA+TGG | 0.371966 | 8:-49940260 | MsG0880044835.01.T01:CDS |
| TGCTGATTATTGCTTTACTT+TGG | 0.386701 | 8:-49939746 | MsG0880044835.01.T01:CDS |
| AATCGCTTATATACGTTTCA+AGG | 0.387103 | 8:+49940340 | None:intergenic |
| GCACTTCCTTGCGCGTTGGT+TGG | 0.390027 | 8:-49939961 | MsG0880044835.01.T01:CDS |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 8:-49939855 | MsG0880044835.01.T01:CDS |
| GAAAATCGCGCAGAAGCTTC+CGG | 0.409737 | 8:+49940170 | None:intergenic |
| GTTTGTTGCTGATAGGTTGT+TGG | 0.410068 | 8:-49939905 | MsG0880044835.01.T01:CDS |
| ACCATAGAAAGCACGCGCTT+CGG | 0.432842 | 8:+49940410 | None:intergenic |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 8:-49939851 | MsG0880044835.01.T01:CDS |
| GATAGGTTGTTGGGTGAACT+TGG | 0.452257 | 8:-49939895 | MsG0880044835.01.T01:CDS |
| TTTGTTGCTGATAGGTTGTT+GGG | 0.461848 | 8:-49939904 | MsG0880044835.01.T01:CDS |
| TACTTCTTTCATGAATCTCC+CGG | 0.464331 | 8:+49940440 | None:intergenic |
| TATTGCTAAGAAAGCTGATT+GGG | 0.465189 | 8:-49940271 | MsG0880044835.01.T01:CDS |
| GCCTTCTTCGCCGCTTCCGA+CGG | 0.470916 | 8:-49940483 | MsG0880044835.01.T01:CDS |
| ACCGTCGGAAGCGGCGAAGA+AGG | 0.474533 | 8:+49940482 | None:intergenic |
| ATCAAATCCATCCAATCAAA+CGG | 0.489030 | 8:+49939844 | None:intergenic |
| ATGGATTTGATTTCGCTTCA+GGG | 0.493555 | 8:-49939832 | MsG0880044835.01.T01:CDS |
| TTCTTCAGCGGTCCAGAAAG+AGG | 0.494376 | 8:+49940581 | None:intergenic |
| AGCGGTCCAGAAAGAGGCTT+CGG | 0.495985 | 8:+49940587 | None:intergenic |
| CGACGCACTTCCTTGCGCGT+TGG | 0.502621 | 8:-49939965 | MsG0880044835.01.T01:CDS |
| TTATTGCTTTACTTTGGATG+AGG | 0.510830 | 8:-49939740 | MsG0880044835.01.T01:CDS |
| TTTCCTCCGATCTTCAACAC+TGG | 0.515193 | 8:-49940551 | MsG0880044835.01.T01:CDS |
| GTATTGCTAAGAAAGCTGAT+TGG | 0.515724 | 8:-49940272 | MsG0880044835.01.T01:CDS |
| TGCGCGTTGGTTGGGATGAA+CGG | 0.518015 | 8:-49939952 | MsG0880044835.01.T01:CDS |
| CAGAAAGCTTCTGTTATGAA+TGG | 0.519026 | 8:-49939772 | MsG0880044835.01.T01:CDS |
| GTGATGCAGTTGAGATTGAA+AGG | 0.522321 | 8:-49939999 | MsG0880044835.01.T01:CDS |
| AATTTCTTTGAGAAGCGCGT+TGG | 0.523856 | 8:-49939802 | MsG0880044835.01.T01:CDS |
| ATCGTCCTCGAAAACCTCGC+CGG | 0.534897 | 8:-49940459 | MsG0880044835.01.T01:CDS |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.535233 | 8:-49939912 | MsG0880044835.01.T01:CDS |
| TCGTCCTCGAAAACCTCGCC+GGG | 0.543275 | 8:-49940458 | MsG0880044835.01.T01:CDS |
| GTTGTTCCAGTGTTGAAGAT+CGG | 0.557909 | 8:+49940545 | None:intergenic |
| GACGAAGTGGCGTTCGCCGT+CGG | 0.563379 | 8:+49940518 | None:intergenic |
| GAGGACGATACCGTCGGAAG+CGG | 0.563447 | 8:+49940473 | None:intergenic |
| TGATGCAGTTGAGATTGAAA+GGG | 0.582117 | 8:-49939998 | MsG0880044835.01.T01:CDS |
| TTCATCCCAACCAACGCGCA+AGG | 0.597180 | 8:+49939955 | None:intergenic |
| TTTCTTTGAGAAGCGCGTTG+GGG | 0.598671 | 8:-49939800 | MsG0880044835.01.T01:CDS |
| CGGAAGCGGCGAAGAAGGCG+AGG | 0.605540 | 8:+49940487 | None:intergenic |
| CTTTCATGAATCTCCCGGCG+AGG | 0.609684 | 8:+49940445 | None:intergenic |
| GAGCTTATTTCGTGTGACGA+AGG | 0.610492 | 8:-49940102 | MsG0880044835.01.T01:CDS |
| GAAGCTGAGTTCAGAGCGAG+TGG | 0.611132 | 8:-49940034 | MsG0880044835.01.T01:CDS |
| CACTGGAACAACCTCACCGA+CGG | 0.611309 | 8:-49940534 | MsG0880044835.01.T01:CDS |
| TCATTTGAGAAAGTTAATCC+CGG | 0.611975 | 8:+49940123 | None:intergenic |
| AGTGGCGTTCGCCGTCGGTG+AGG | 0.618653 | 8:+49940523 | None:intergenic |
| TGGATTTGATTTCGCTTCAG+GGG | 0.620413 | 8:-49939831 | MsG0880044835.01.T01:CDS |
| GTTCCAGTGTTGAAGATCGG+AGG | 0.622372 | 8:+49940548 | None:intergenic |
| CGAGGATGTGAGAGACGAAG+TGG | 0.630959 | 8:+49940505 | None:intergenic |
| TCAGCTTTCTTAGCAATACA+CGG | 0.642160 | 8:+49940276 | None:intergenic |
| AAGGAGAAGAGAATACATCT+CGG | 0.671542 | 8:+49940359 | None:intergenic |
| AAAGCTTCTGTTATGAATGG+TGG | 0.674687 | 8:-49939769 | MsG0880044835.01.T01:CDS |
| GGAAAGATCGACTTCTTCAG+CGG | 0.689628 | 8:+49940569 | None:intergenic |
| GAAGAGAATACATCTCGGAG+TGG | 0.695258 | 8:+49940364 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTCAATACCCAAAAATCT+GGG | - | Chr8:49939740-49939759 | MsG0880044835.01.T01:CDS | 25.0% |
| !!! | AGATTTTTGGGTATTGAATT+GGG | + | Chr8:49939740-49939759 | None:intergenic | 25.0% |
| AATCGCTTATATACGTTTCA+AGG | + | Chr8:49940028-49940047 | None:intergenic | 30.0% | |
| ATCAAATCCATCCAATCAAA+CGG | + | Chr8:49940524-49940543 | None:intergenic | 30.0% | |
| CAATTCAATACCCAAAAATC+TGG | - | Chr8:49939739-49939758 | MsG0880044835.01.T01:CDS | 30.0% | |
| TATTGCTAAGAAAGCTGATT+GGG | - | Chr8:49940094-49940113 | MsG0880044835.01.T01:CDS | 30.0% | |
| TCATTTGAGAAAGTTAATCC+CGG | + | Chr8:49940245-49940264 | None:intergenic | 30.0% | |
| TTATTGCTTTACTTTGGATG+AGG | - | Chr8:49940625-49940644 | MsG0880044835.01.T01:CDS | 30.0% | |
| ! | TGCTGATTATTGCTTTACTT+TGG | - | Chr8:49940619-49940638 | MsG0880044835.01.T01:CDS | 30.0% |
| ! | TGTACATTTCCCAGATTTTT+GGG | + | Chr8:49939752-49939771 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | + | Chr8:49939753-49939772 | None:intergenic | 30.0% |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | - | Chr8:49940453-49940472 | MsG0880044835.01.T01:CDS | 30.0% |
| !!! | ATTTTCTGGTTGAAAAAACG+CGG | - | Chr8:49940212-49940231 | MsG0880044835.01.T01:CDS | 30.0% |
| !!! | CAGATTTTTGGGTATTGAAT+TGG | + | Chr8:49939741-49939760 | None:intergenic | 30.0% |
| AAAGCTTCTGTTATGAATGG+TGG | - | Chr8:49940596-49940615 | MsG0880044835.01.T01:CDS | 35.0% | |
| AAGGAGAAGAGAATACATCT+CGG | + | Chr8:49940009-49940028 | None:intergenic | 35.0% | |
| ATGTTCAGAATCCGTTTGAT+TGG | - | Chr8:49940510-49940529 | MsG0880044835.01.T01:CDS | 35.0% | |
| CAGAAAGCTTCTGTTATGAA+TGG | - | Chr8:49940593-49940612 | MsG0880044835.01.T01:CDS | 35.0% | |
| GTATTGCTAAGAAAGCTGAT+TGG | - | Chr8:49940093-49940112 | MsG0880044835.01.T01:CDS | 35.0% | |
| TACTTCTTTCATGAATCTCC+CGG | + | Chr8:49939928-49939947 | None:intergenic | 35.0% | |
| TCAGCTTTCTTAGCAATACA+CGG | + | Chr8:49940092-49940111 | None:intergenic | 35.0% | |
| TGATGCAGTTGAGATTGAAA+GGG | - | Chr8:49940367-49940386 | MsG0880044835.01.T01:CDS | 35.0% | |
| TTTGTTGCTGATAGGTTGTT+GGG | - | Chr8:49940461-49940480 | MsG0880044835.01.T01:CDS | 35.0% | |
| ! | ATGGATTTGATTTCGCTTCA+GGG | - | Chr8:49940533-49940552 | MsG0880044835.01.T01:CDS | 35.0% |
| ! | GTTGAAGGAATTTTCTTCTC+CGG | - | Chr8:49940176-49940195 | MsG0880044835.01.T01:CDS | 35.0% |
| AAAAAACGCGGTTTAATGCC+GGG | - | Chr8:49940224-49940243 | MsG0880044835.01.T01:CDS | 40.0% | |
| GAAAAAACGCGGTTTAATGC+CGG | - | Chr8:49940223-49940242 | MsG0880044835.01.T01:CDS | 40.0% | |
| GTGATGCAGTTGAGATTGAA+AGG | - | Chr8:49940366-49940385 | MsG0880044835.01.T01:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | - | Chr8:49940514-49940533 | MsG0880044835.01.T01:CDS | 40.0% | |
| ! | AATTTCTTTGAGAAGCGCGT+TGG | - | Chr8:49940563-49940582 | MsG0880044835.01.T01:CDS | 40.0% |
| ! | ATTTCTTTGAGAAGCGCGTT+GGG | - | Chr8:49940564-49940583 | MsG0880044835.01.T01:CDS | 40.0% |
| ! | GATGGATTTGATTTCGCTTC+AGG | - | Chr8:49940532-49940551 | MsG0880044835.01.T01:CDS | 40.0% |
| ! | GGATGTTTTCAATAGCGATC+TGG | + | Chr8:49939983-49940002 | None:intergenic | 40.0% |
| ! | GTTGTTCCAGTGTTGAAGAT+CGG | + | Chr8:49939823-49939842 | None:intergenic | 40.0% |
| ! | GTTTGTTGCTGATAGGTTGT+TGG | - | Chr8:49940460-49940479 | MsG0880044835.01.T01:CDS | 40.0% |
| ! | TGGATTTGATTTCGCTTCAG+GGG | - | Chr8:49940534-49940553 | MsG0880044835.01.T01:CDS | 40.0% |
| !! | AAGCTGATTGGGCTTTGAAA+TGG | - | Chr8:49940105-49940124 | MsG0880044835.01.T01:CDS | 40.0% |
| !!! | GTTGCTTTTGCTTGTGTTGA+AGG | - | Chr8:49940161-49940180 | MsG0880044835.01.T01:CDS | 40.0% |
| AAAAAGCCGAAGCCTCTTTC+TGG | - | Chr8:49939772-49939791 | MsG0880044835.01.T01:CDS | 45.0% | |
| GAAGAGAATACATCTCGGAG+TGG | + | Chr8:49940004-49940023 | None:intergenic | 45.0% | |
| GAGCTTATTTCGTGTGACGA+AGG | - | Chr8:49940263-49940282 | MsG0880044835.01.T01:CDS | 45.0% | |
| GATAGGTTGTTGGGTGAACT+TGG | - | Chr8:49940470-49940489 | MsG0880044835.01.T01:CDS | 45.0% | |
| TTTCCTCCGATCTTCAACAC+TGG | - | Chr8:49939814-49939833 | MsG0880044835.01.T01:CDS | 45.0% | |
| ! | GGAAAGATCGACTTCTTCAG+CGG | + | Chr8:49939799-49939818 | None:intergenic | 45.0% |
| ! | TTTCTTTGAGAAGCGCGTTG+GGG | - | Chr8:49940565-49940584 | MsG0880044835.01.T01:CDS | 45.0% |
| GAAAATCGCGCAGAAGCTTC+CGG | + | Chr8:49940198-49940217 | None:intergenic | 50.0% | |
| TTCTTCAGCGGTCCAGAAAG+AGG | + | Chr8:49939787-49939806 | None:intergenic | 50.0% | |
| ! | ACCATAGAAAGCACGCGCTT+CGG | + | Chr8:49939958-49939977 | None:intergenic | 50.0% |
| ! | GAAGCTTCTGCGCGATTTTC+TGG | - | Chr8:49940198-49940217 | MsG0880044835.01.T01:CDS | 50.0% |
| ! | GTTCCAGTGTTGAAGATCGG+AGG | + | Chr8:49939820-49939839 | None:intergenic | 50.0% |
| !! | GTTTTCGAGGACGATACCGT+CGG | + | Chr8:49939901-49939920 | None:intergenic | 50.0% |
| AGCGGTCCAGAAAGAGGCTT+CGG | + | Chr8:49939781-49939800 | None:intergenic | 55.0% | |
| ATCGTCCTCGAAAACCTCGC+CGG | - | Chr8:49939906-49939925 | MsG0880044835.01.T01:CDS | 55.0% | |
| CACTGGAACAACCTCACCGA+CGG | - | Chr8:49939831-49939850 | MsG0880044835.01.T01:CDS | 55.0% | |
| CGAGGATGTGAGAGACGAAG+TGG | + | Chr8:49939863-49939882 | None:intergenic | 55.0% | |
| CTTTCATGAATCTCCCGGCG+AGG | + | Chr8:49939923-49939942 | None:intergenic | 55.0% | |
| GAAGCTGAGTTCAGAGCGAG+TGG | - | Chr8:49940331-49940350 | MsG0880044835.01.T01:CDS | 55.0% | |
| TCCGAAGCGCGTGCTTTCTA+TGG | - | Chr8:49939954-49939973 | MsG0880044835.01.T01:CDS | 55.0% | |
| TTCATCCCAACCAACGCGCA+AGG | + | Chr8:49940413-49940432 | None:intergenic | 55.0% | |
| !! | CACTTCCTTGCGCGTTGGTT+GGG | - | Chr8:49940405-49940424 | MsG0880044835.01.T01:CDS | 55.0% |
| !! | TGCGCGTTGGTTGGGATGAA+CGG | - | Chr8:49940413-49940432 | MsG0880044835.01.T01:CDS | 55.0% |
| GAGGACGATACCGTCGGAAG+CGG | + | Chr8:49939895-49939914 | None:intergenic | 60.0% | |
| TCGTCCTCGAAAACCTCGCC+GGG | - | Chr8:49939907-49939926 | MsG0880044835.01.T01:CDS | 60.0% | |
| ! | ATCTCCCGGCGAGGTTTTCG+AGG | + | Chr8:49939914-49939933 | None:intergenic | 60.0% |
| ! | GCACTTCCTTGCGCGTTGGT+TGG | - | Chr8:49940404-49940423 | MsG0880044835.01.T01:CDS | 60.0% |
| ACCGTCGGAAGCGGCGAAGA+AGG | + | Chr8:49939886-49939905 | None:intergenic | 65.0% | |
| CGACGCACTTCCTTGCGCGT+TGG | - | Chr8:49940400-49940419 | MsG0880044835.01.T01:CDS | 65.0% | |
| GACGAAGTGGCGTTCGCCGT+CGG | + | Chr8:49939850-49939869 | None:intergenic | 65.0% | |
| GCCTTCTTCGCCGCTTCCGA+CGG | - | Chr8:49939882-49939901 | MsG0880044835.01.T01:CDS | 65.0% | |
| AGTGGCGTTCGCCGTCGGTG+AGG | + | Chr8:49939845-49939864 | None:intergenic | 70.0% | |
| CGGAAGCGGCGAAGAAGGCG+AGG | + | Chr8:49939881-49939900 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 49939732 | 49940655 | 49939732 | ID=MsG0880044835.01;Name=MsG0880044835.01 |
| Chr8 | mRNA | 49939732 | 49940655 | 49939732 | ID=MsG0880044835.01.T01;Parent=MsG0880044835.01;Name=MsG0880044835.01.T01;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|307 |
| Chr8 | exon | 49939732 | 49940655 | 49939732 | ID=MsG0880044835.01.T01:exon:20911;Parent=MsG0880044835.01.T01 |
| Chr8 | CDS | 49939732 | 49940655 | 49939732 | ID=MsG0880044835.01.T01:cds;Parent=MsG0880044835.01.T01 |
| Gene Sequence |
| Protein sequence |
