Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046885.01.T01 | XP_003609510.1 | 96.701 | 485 | 15 | 1 | 1 | 484 | 1 | 485 | 0 | 966 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046885.01.T01 | G7JHS8 | 96.701 | 485 | 15 | 1 | 1 | 484 | 1 | 485 | 0.0 | 966 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048311.01 | MsG0880046885.01 | 0.826609 | 2.469781e-54 | 2.327389e-51 |
| MsG0080048775.01 | MsG0880046885.01 | 0.831184 | 1.927403e-55 | 2.075798e-52 |
| MsG0080048781.01 | MsG0880046885.01 | 0.852424 | 4.660241e-61 | 9.732763e-58 |
| MsG0080049140.01 | MsG0880046885.01 | 0.837210 | 5.946631e-57 | 7.670020e-54 |
| MsG0180000111.01 | MsG0880046885.01 | 0.817752 | 2.802230e-52 | 2.058458e-49 |
| MsG0180000348.01 | MsG0880046885.01 | 0.800512 | 1.391920e-48 | 6.493326e-46 |
| MsG0180001293.01 | MsG0880046885.01 | 0.813355 | 2.669180e-51 | 1.739213e-48 |
| MsG0180002218.01 | MsG0880046885.01 | 0.803841 | 2.875532e-49 | 1.460122e-46 |
| MsG0180002397.01 | MsG0880046885.01 | 0.848792 | 4.889105e-60 | 9.076442e-57 |
| MsG0180002421.01 | MsG0880046885.01 | 0.822302 | 2.547562e-53 | 2.124122e-50 |
| MsG0180002429.01 | MsG0880046885.01 | 0.826099 | 3.267122e-54 | 3.034473e-51 |
| MsG0180002583.01 | MsG0880046885.01 | 0.807069 | 6.050555e-50 | 3.337867e-47 |
| MsG0880044340.01 | MsG0880046885.01 | 0.826138 | 3.197044e-54 | 2.972789e-51 |
| MsG0880044835.01 | MsG0880046885.01 | 0.857026 | 2.159755e-62 | 5.256612e-59 |
| MsG0880045430.01 | MsG0880046885.01 | 0.831218 | 1.890541e-55 | 2.038151e-52 |
| MsG0880045552.01 | MsG0880046885.01 | 0.827475 | 1.533221e-54 | 1.481796e-51 |
| MsG0880045612.01 | MsG0880046885.01 | 0.849687 | 2.754976e-60 | 5.265431e-57 |
| MsG0880046208.01 | MsG0880046885.01 | 0.848492 | 5.919949e-60 | 1.088438e-56 |
| MsG0880046431.01 | MsG0880046885.01 | 0.829281 | 5.618807e-55 | 5.725441e-52 |
| MsG0880046618.01 | MsG0880046885.01 | 0.813612 | 2.343260e-51 | 1.537565e-48 |
| MsG0880046646.01 | MsG0880046885.01 | 0.860957 | 1.437226e-63 | 3.999309e-60 |
| MsG0880046672.01 | MsG0880046885.01 | 0.830142 | 3.469106e-55 | 3.623883e-52 |
| MsG0880046885.01 | MsG0880046904.01 | 0.815543 | 8.759468e-52 | 6.056790e-49 |
| MsG0880046885.01 | MsG0880047223.01 | 0.810832 | 9.473245e-51 | 5.770934e-48 |
| MsG0880046885.01 | MsG0880047226.01 | 0.879289 | 1.406768e-69 | 7.585341e-66 |
| MsG0880046885.01 | MsG0880047447.01 | 0.824187 | 9.248008e-54 | 8.133038e-51 |
| MsG0880046885.01 | MsG0880047466.01 | 0.820191 | 7.814433e-53 | 6.141324e-50 |
| MsG0880046885.01 | MsG0880047640.01 | 0.819830 | 9.449884e-53 | 7.352088e-50 |
| MsG0880046885.01 | MsG0880047649.01 | 0.851326 | 9.547751e-61 | 1.925718e-57 |
| MsG0180003427.01 | MsG0880046885.01 | 0.830582 | 2.708161e-55 | 2.865141e-52 |
| MsG0180003485.01 | MsG0880046885.01 | 0.855024 | 8.323078e-62 | 1.895240e-58 |
| MsG0180003658.01 | MsG0880046885.01 | 0.865492 | 5.678633e-65 | 1.851039e-61 |
| MsG0180003698.01 | MsG0880046885.01 | 0.805672 | 1.192277e-49 | 6.345913e-47 |
| MsG0180003796.01 | MsG0880046885.01 | 0.850625 | 1.504530e-60 | 2.965223e-57 |
| MsG0180003857.01 | MsG0880046885.01 | 0.815961 | 7.069129e-52 | 4.944120e-49 |
| MsG0180004126.01 | MsG0880046885.01 | 0.872857 | 2.303425e-67 | 9.786585e-64 |
| MsG0180004299.01 | MsG0880046885.01 | 0.809546 | 1.793410e-50 | 1.056019e-47 |
| MsG0180004538.01 | MsG0880046885.01 | 0.824342 | 8.502100e-54 | 7.509643e-51 |
| MsG0180004583.01 | MsG0880046885.01 | 0.802963 | 4.371835e-49 | 2.170335e-46 |
| MsG0180004806.01 | MsG0880046885.01 | 0.822167 | 2.738711e-53 | 2.274503e-50 |
| MsG0180004995.01 | MsG0880046885.01 | 0.806405 | 8.358641e-50 | 4.532911e-47 |
| MsG0180005002.01 | MsG0880046885.01 | 0.822564 | 2.214924e-53 | 1.860675e-50 |
| MsG0180005435.01 | MsG0880046885.01 | 0.802755 | 4.825566e-49 | 2.383043e-46 |
| MsG0180005835.01 | MsG0880046885.01 | 0.812242 | 4.678006e-51 | 2.958817e-48 |
| MsG0180006000.01 | MsG0880046885.01 | 0.807618 | 4.628297e-50 | 2.589949e-47 |
| MsG0180006133.01 | MsG0880046885.01 | 0.841941 | 3.499918e-58 | 5.224073e-55 |
| MsG0780040307.01 | MsG0880046885.01 | 0.815297 | 9.937565e-52 | 6.824815e-49 |
| MsG0780040364.01 | MsG0880046885.01 | 0.846533 | 2.046671e-59 | 3.533689e-56 |
| MsG0780040533.01 | MsG0880046885.01 | 0.841575 | 4.373678e-58 | 6.454003e-55 |
| MsG0780040543.01 | MsG0880046885.01 | 0.807077 | 6.027071e-50 | 3.325506e-47 |
| MsG0780040620.01 | MsG0880046885.01 | 0.833590 | 4.885810e-56 | 5.652245e-53 |
| MsG0780040641.01 | MsG0880046885.01 | 0.824997 | 5.960027e-54 | 5.364996e-51 |
| MsG0780040828.01 | MsG0880046885.01 | 0.821988 | 3.012543e-53 | 2.489225e-50 |
| MsG0780041063.01 | MsG0880046885.01 | 0.850545 | 1.584370e-60 | 3.114307e-57 |
| MsG0780041132.01 | MsG0880046885.01 | 0.874144 | 8.492976e-68 | 3.781088e-64 |
| MsG0780041141.01 | MsG0880046885.01 | 0.857822 | 1.255780e-62 | 3.139485e-59 |
| MsG0780041142.01 | MsG0880046885.01 | 0.825931 | 3.581676e-54 | 3.310945e-51 |
| MsG0780041143.01 | MsG0880046885.01 | 0.890931 | 6.300962e-74 | 5.409569e-70 |
| MsG0780041340.01 | MsG0880046885.01 | 0.887555 | 1.287368e-72 | 9.618189e-69 |
| MsG0780041359.01 | MsG0880046885.01 | 0.820312 | 7.329043e-53 | 5.778884e-50 |
| MsG0780041756.01 | MsG0880046885.01 | 0.815194 | 1.047601e-51 | 7.174060e-49 |
| MsG0880041930.01 | MsG0880046885.01 | 0.820367 | 7.122283e-53 | 5.624487e-50 |
| MsG0880042773.01 | MsG0880046885.01 | 0.833551 | 4.997693e-56 | 5.775075e-53 |
| MsG0880042791.01 | MsG0880046885.01 | 0.808991 | 2.359711e-50 | 1.368952e-47 |
| MsG0880042845.01 | MsG0880046885.01 | 0.804661 | 1.940697e-49 | 1.006413e-46 |
| MsG0880042906.01 | MsG0880046885.01 | 0.813794 | 2.136938e-51 | 1.409043e-48 |
| MsG0880042929.01 | MsG0880046885.01 | 0.808261 | 3.378666e-50 | 1.922962e-47 |
| MsG0880043516.01 | MsG0880046885.01 | 0.831775 | 1.378474e-55 | 1.511203e-52 |
| MsG0880043637.01 | MsG0880046885.01 | 0.823893 | 1.084075e-53 | 9.455317e-51 |
| MsG0280010579.01 | MsG0880046885.01 | 0.874903 | 4.693107e-68 | 2.149862e-64 |
| MsG0280010977.01 | MsG0880046885.01 | 0.841265 | 5.276921e-58 | 7.711563e-55 |
| MsG0280011154.01 | MsG0880046885.01 | 0.855934 | 4.521405e-62 | 1.061269e-58 |
| MsG0280011331.01 | MsG0880046885.01 | 0.822754 | 2.000164e-53 | 1.689348e-50 |
| MsG0380012788.01 | MsG0880046885.01 | 0.832672 | 8.268494e-56 | 9.306847e-53 |
| MsG0380012808.01 | MsG0880046885.01 | 0.824244 | 8.963039e-54 | 7.894999e-51 |
| MsG0680031616.01 | MsG0880046885.01 | 0.842161 | 3.061245e-58 | 4.600936e-55 |
| MsG0680031701.01 | MsG0880046885.01 | 0.809124 | 2.209377e-50 | 1.286396e-47 |
| MsG0680032772.01 | MsG0880046885.01 | 0.829608 | 4.680848e-55 | 4.814611e-52 |
| MsG0680032773.01 | MsG0880046885.01 | 0.843885 | 1.063780e-58 | 1.688119e-55 |
| MsG0680033696.01 | MsG0880046885.01 | 0.856194 | 3.792488e-62 | 8.978402e-59 |
| MsG0680035350.01 | MsG0880046885.01 | 0.831122 | 1.996000e-55 | 2.145770e-52 |
| MsG0480018526.01 | MsG0880046885.01 | 0.881803 | 1.771029e-70 | 1.052166e-66 |
| MsG0480018785.01 | MsG0880046885.01 | 0.848803 | 4.857207e-60 | 9.019910e-57 |
| MsG0480018885.01 | MsG0880046885.01 | 0.834058 | 3.732529e-56 | 4.379164e-53 |
| MsG0480018918.01 | MsG0880046885.01 | 0.828751 | 7.553907e-55 | 7.576190e-52 |
| MsG0480020847.01 | MsG0880046885.01 | 0.820323 | 7.289278e-53 | 5.748977e-50 |
| MsG0480020856.01 | MsG0880046885.01 | 0.812289 | 4.569804e-51 | 2.894009e-48 |
| MsG0480020965.01 | MsG0880046885.01 | 0.808982 | 2.369301e-50 | 1.374224e-47 |
| MsG0480021013.01 | MsG0880046885.01 | 0.834437 | 2.999018e-56 | 3.559011e-53 |
| MsG0480021450.01 | MsG0880046885.01 | 0.803341 | 3.651818e-49 | 1.830467e-46 |
| MsG0480021901.01 | MsG0880046885.01 | 0.829347 | 5.416949e-55 | 5.530005e-52 |
| MsG0480022331.01 | MsG0880046885.01 | 0.821585 | 3.733145e-53 | 3.049529e-50 |
| MsG0480022559.01 | MsG0880046885.01 | 0.871636 | 5.876385e-67 | 2.387712e-63 |
| MsG0480022784.01 | MsG0880046885.01 | 0.842086 | 3.204554e-58 | 4.805414e-55 |
| MsG0480022931.01 | MsG0880046885.01 | 0.832367 | 9.844055e-56 | 1.097963e-52 |
| MsG0480022982.01 | MsG0880046885.01 | 0.827455 | 1.549574e-54 | 1.496783e-51 |
| MsG0480022991.01 | MsG0880046885.01 | 0.848787 | 4.904341e-60 | 9.103510e-57 |
| MsG0480022998.01 | MsG0880046885.01 | 0.820766 | 5.766485e-53 | 4.604537e-50 |
| MsG0480023003.01 | MsG0880046885.01 | 0.822831 | 1.918737e-53 | 1.624152e-50 |
| MsG0480023158.01 | MsG0880046885.01 | 0.834895 | 2.299769e-56 | 2.766721e-53 |
| MsG0480023194.01 | MsG0880046885.01 | 0.881289 | 2.715240e-70 | 1.581513e-66 |
| MsG0480023262.01 | MsG0880046885.01 | 0.862722 | 4.143270e-64 | 1.225546e-60 |
| MsG0480023296.01 | MsG0880046885.01 | 0.898062 | 7.661295e-77 | 8.910489e-73 |
| MsG0480023458.01 | MsG0880046885.01 | 0.804300 | 2.308353e-49 | 1.185969e-46 |
| MsG0480023484.01 | MsG0880046885.01 | 0.804222 | 2.395472e-49 | 1.228225e-46 |
| MsG0480023620.01 | MsG0880046885.01 | 0.806386 | 8.436471e-50 | 4.572846e-47 |
| MsG0480023653.01 | MsG0880046885.01 | 0.823961 | 1.044844e-53 | 9.130960e-51 |
| MsG0480023672.01 | MsG0880046885.01 | 0.901192 | 3.435287e-78 | 4.589930e-74 |
| MsG0580024109.01 | MsG0880046885.01 | 0.813136 | 2.982601e-51 | 1.931673e-48 |
| MsG0580024489.01 | MsG0880046885.01 | 0.860143 | 2.536761e-63 | 6.864684e-60 |
| MsG0580024657.01 | MsG0880046885.01 | 0.828294 | 9.738259e-55 | 9.638679e-52 |
| MsG0580024742.01 | MsG0880046885.01 | 0.830814 | 2.375149e-55 | 2.530317e-52 |
| MsG0580024748.01 | MsG0880046885.01 | 0.819819 | 9.507833e-53 | 7.394955e-50 |
| MsG0580024787.01 | MsG0880046885.01 | 0.877058 | 8.517674e-69 | 4.224180e-65 |
| MsG0580024813.01 | MsG0880046885.01 | 0.885512 | 7.629120e-72 | 5.252031e-68 |
| MsG0580024954.01 | MsG0880046885.01 | 0.853309 | 2.601536e-61 | 5.596575e-58 |
| MsG0580025093.01 | MsG0880046885.01 | 0.879729 | 9.823560e-70 | 5.385573e-66 |
| MsG0580025177.01 | MsG0880046885.01 | 0.844535 | 7.120424e-59 | 1.153063e-55 |
| MsG0580025186.01 | MsG0880046885.01 | 0.811633 | 6.351362e-51 | 3.951560e-48 |
| MsG0580025506.01 | MsG0880046885.01 | 0.807537 | 4.816192e-50 | 2.689402e-47 |
| MsG0580025614.01 | MsG0880046885.01 | 0.821591 | 3.721051e-53 | 3.040180e-50 |
| MsG0580025766.01 | MsG0880046885.01 | 0.808702 | 2.720066e-50 | 1.565968e-47 |
| MsG0580025775.01 | MsG0880046885.01 | 0.854431 | 1.236729e-61 | 2.761297e-58 |
| MsG0380015219.01 | MsG0880046885.01 | 0.836600 | 8.507623e-57 | 1.077315e-53 |
| MsG0380015394.01 | MsG0880046885.01 | 0.852656 | 4.001947e-61 | 8.421138e-58 |
| MsG0380015548.01 | MsG0880046885.01 | 0.846514 | 2.070417e-59 | 3.572693e-56 |
| MsG0380015816.01 | MsG0880046885.01 | 0.814309 | 1.645370e-51 | 1.100235e-48 |
| MsG0380016091.01 | MsG0880046885.01 | 0.810461 | 1.139558e-50 | 6.873125e-48 |
| MsG0380016140.01 | MsG0880046885.01 | 0.817802 | 2.730472e-52 | 2.008446e-49 |
| MsG0380016217.01 | MsG0880046885.01 | 0.850940 | 1.226672e-60 | 2.442978e-57 |
| MsG0380016225.01 | MsG0880046885.01 | 0.824220 | 9.081645e-54 | 7.994137e-51 |
| MsG0380016703.01 | MsG0880046885.01 | 0.837009 | 6.692609e-57 | 8.580647e-54 |
| MsG0380016722.01 | MsG0880046885.01 | 0.815616 | 8.440180e-52 | 5.848091e-49 |
| MsG0380017159.01 | MsG0880046885.01 | 0.827450 | 1.554248e-54 | 1.501082e-51 |
| MsG0380017164.01 | MsG0880046885.01 | 0.857949 | 1.151274e-62 | 2.890739e-59 |
| MsG0380017282.01 | MsG0880046885.01 | 0.816045 | 6.769042e-52 | 4.745469e-49 |
| MsG0380017361.01 | MsG0880046885.01 | 0.861231 | 1.186023e-63 | 3.332290e-60 |
| MsG0380017605.01 | MsG0880046885.01 | 0.832080 | 1.159209e-55 | 1.282032e-52 |
| MsG0380017632.01 | MsG0880046885.01 | 0.832159 | 1.108385e-55 | 1.228593e-52 |
| MsG0480018397.01 | MsG0880046885.01 | 0.802917 | 4.467752e-49 | 2.215434e-46 |
| MsG0580026141.01 | MsG0880046885.01 | 0.812668 | 3.775753e-51 | 2.415289e-48 |
| MsG0580026142.01 | MsG0880046885.01 | 0.825590 | 4.315631e-54 | 3.950625e-51 |
| MsG0580028756.01 | MsG0880046885.01 | 0.911522 | 5.531124e-83 | 1.189563e-78 |
| MsG0580028923.01 | MsG0880046885.01 | 0.840175 | 1.018531e-57 | 1.439147e-54 |
| MsG0580029123.01 | MsG0880046885.01 | 0.826119 | 3.231531e-54 | 3.003127e-51 |
| MsG0580029197.01 | MsG0880046885.01 | 0.813833 | 2.095167e-51 | 1.382937e-48 |
| MsG0580029261.01 | MsG0880046885.01 | 0.869633 | 2.675856e-66 | 1.011207e-62 |
| MsG0580029270.01 | MsG0880046885.01 | 0.827130 | 1.854473e-54 | 1.774208e-51 |
| MsG0580029298.01 | MsG0880046885.01 | 0.842646 | 2.276841e-58 | 3.474408e-55 |
| MsG0580029591.01 | MsG0880046885.01 | 0.854888 | 9.114598e-62 | 2.066044e-58 |
| MsG0280006477.01 | MsG0880046885.01 | 0.806486 | 8.037363e-50 | 4.367767e-47 |
| MsG0280006540.01 | MsG0880046885.01 | 0.890465 | 9.611914e-74 | 8.088484e-70 |
| MsG0280006563.01 | MsG0880046885.01 | 0.875927 | 2.093779e-68 | 9.960312e-65 |
| MsG0280007359.01 | MsG0880046885.01 | 0.886977 | 2.138177e-72 | 1.560803e-68 |
| MsG0280007761.01 | MsG0880046885.01 | 0.826641 | 2.426764e-54 | 2.289058e-51 |
| MsG0280009289.01 | MsG0880046885.01 | 0.804451 | 2.147010e-49 | 1.107349e-46 |
| MsG0280009752.01 | MsG0880046885.01 | 0.847732 | 9.602275e-60 | 1.722830e-56 |
| MsG0680035776.01 | MsG0880046885.01 | 0.816543 | 5.239152e-52 | 3.722899e-49 |
| MsG0680035878.01 | MsG0880046885.01 | 0.870497 | 1.395806e-66 | 5.441386e-63 |
| MsG0780037158.01 | MsG0880046885.01 | 0.863560 | 2.281232e-64 | 6.944587e-61 |
| MsG0780037741.01 | MsG0880046885.01 | 0.825459 | 4.634083e-54 | 4.226136e-51 |
| MsG0780038402.01 | MsG0880046885.01 | 0.859830 | 3.153562e-63 | 8.442760e-60 |
| MsG0780038445.01 | MsG0880046885.01 | 0.830332 | 3.117354e-55 | 3.274366e-52 |
| MsG0780039189.01 | MsG0880046885.01 | 0.808056 | 3.735733e-50 | 2.114540e-47 |
| MsG0780039861.01 | MsG0880046885.01 | 0.864647 | 1.046308e-64 | 3.309844e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046885.01.T01 | MTR_4g116470 | 96.701 | 485 | 15 | 1 | 1 | 484 | 1 | 485 | 0.0 | 966 |
| MsG0880046885.01.T01 | MTR_8g014610 | 80.303 | 66 | 13 | 0 | 137 | 202 | 75 | 140 | 5.46e-23 | 102 |
| MsG0880046885.01.T01 | MTR_4g116465 | 63.462 | 52 | 14 | 3 | 432 | 482 | 21 | 68 | 2.10e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 99 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCTTTCCTTTGCCGGTTT+TGG | 0.132946 | 8:+79508378 | None:intergenic |
| AAGATTACCATTCTTCTAAA+AGG | 0.245256 | 8:-79508725 | MsG0880046885.01.T01:CDS |
| CCACCACCGCTTTCCTTTGC+CGG | 0.246066 | 8:+79508372 | None:intergenic |
| CTTACGAAAATTTAAGATTA+GGG | 0.253367 | 8:+79507667 | None:intergenic |
| TTCAATCCGACAACATTAAA+TGG | 0.266143 | 8:-79509054 | MsG0880046885.01.T01:CDS |
| GTTCTGGAGGAGAAGAAATA+AGG | 0.277590 | 8:+79508927 | None:intergenic |
| TCAGCATAACCATGCGAAAA+TGG | 0.289824 | 8:+79507139 | None:intergenic |
| TTCTTGATCAACTTGGTATC+TGG | 0.293414 | 8:+79508099 | None:intergenic |
| CAGCTTAATTAGTTTCTTAG+AGG | 0.294912 | 8:+79507073 | None:intergenic |
| CGGCGAAGAGGAAACCGTTT+AGG | 0.307611 | 8:-79508347 | MsG0880046885.01.T01:CDS |
| TCAGCTTTGAAACAGATTAA+AGG | 0.321217 | 8:-79508522 | MsG0880046885.01.T01:CDS |
| GGCGAAGAGGAAACCGTTTA+GGG | 0.325643 | 8:-79508346 | MsG0880046885.01.T01:CDS |
| ATGATGGGGTGTTCTTGTTC+TGG | 0.330881 | 8:+79508911 | None:intergenic |
| ACTTACGAAAATTTAAGATT+AGG | 0.331559 | 8:+79507666 | None:intergenic |
| TGAAGGGAAAACTATTCTTA+TGG | 0.353653 | 8:-79508415 | MsG0880046885.01.T01:CDS |
| TGTCCACCGCTTTGAGTTGC+CGG | 0.357167 | 8:+79507237 | None:intergenic |
| TTGTGCTGCTAAGTTCTGTC+TGG | 0.376695 | 8:+79507691 | None:intergenic |
| TGTGCTGGATGTGGTGAAAA+AGG | 0.400048 | 8:-79507323 | MsG0880046885.01.T01:CDS |
| GAAATGGAAGAGAAATGAAT+TGG | 0.404831 | 8:-79508220 | MsG0880046885.01.T01:CDS |
| ATGAAGAGTTGAGTAGTAAG+TGG | 0.408973 | 8:+79509165 | None:intergenic |
| AAGCTTGTCTCTTATTATGA+TGG | 0.411561 | 8:+79508895 | None:intergenic |
| TTTGAAGTTGAAAGGAAGAA+TGG | 0.411584 | 8:+79509117 | None:intergenic |
| TTGTTGCCATTTAATGTTGT+CGG | 0.414582 | 8:+79509048 | None:intergenic |
| GGTTTGATGGATTGAAGAAA+TGG | 0.418072 | 8:-79508236 | MsG0880046885.01.T01:CDS |
| GTTTAGGGCTTTGTTTCATA+AGG | 0.429995 | 8:-79508331 | MsG0880046885.01.T01:CDS |
| AAAGGAAAGCGGTGGTGGTT+CGG | 0.434529 | 8:-79508367 | MsG0880046885.01.T01:CDS |
| GGAAAGTGAGCCTCCAAAAC+CGG | 0.441069 | 8:-79508391 | MsG0880046885.01.T01:CDS |
| AGACCATGGTGTGACAAATA+TGG | 0.442042 | 8:-79507352 | MsG0880046885.01.T01:CDS |
| TTGTTTGATGAAATTGTTTG+AGG | 0.445526 | 8:+79509212 | None:intergenic |
| CAACTTCTTCTTGATCAACT+TGG | 0.448682 | 8:+79508092 | None:intergenic |
| ACAGATTAAAGGAGCAGCTT+CGG | 0.449986 | 8:-79508511 | MsG0880046885.01.T01:CDS |
| TTATGAAACAAAGCCCTAAA+CGG | 0.451909 | 8:+79508333 | None:intergenic |
| TTCTGGAGGAGAAGAAATAA+GGG | 0.465428 | 8:+79508928 | None:intergenic |
| CAGAGAGAGGGAAATGGTGG+TGG | 0.465482 | 8:-79508306 | MsG0880046885.01.T01:CDS |
| AGCTTGTCTCTTATTATGAT+GGG | 0.465581 | 8:+79508896 | None:intergenic |
| CAAATATGGCGACGTTGTGC+TGG | 0.467153 | 8:-79507338 | MsG0880046885.01.T01:CDS |
| ACTGCTAACCTTTGCACCAA+TGG | 0.474150 | 8:+79508702 | None:intergenic |
| TTCAAATCAGCTTTATCCAC+AGG | 0.475350 | 8:+79507493 | None:intergenic |
| CCATTCTTCTAAAAGGCCAT+TGG | 0.477565 | 8:-79508718 | MsG0880046885.01.T01:CDS |
| GTAGTAAGTGGGTGTGTAGT+TGG | 0.482252 | 8:+79509177 | None:intergenic |
| CTAAAAGGCCATTGGTGCAA+AGG | 0.490692 | 8:-79508710 | MsG0880046885.01.T01:CDS |
| TTTGGGAAACAACATAAAGA+AGG | 0.496221 | 8:-79507727 | MsG0880046885.01.T01:CDS |
| TTTGCAAGAGCAGTTGGTGA+TGG | 0.503060 | 8:-79508123 | MsG0880046885.01.T01:CDS |
| GACCCATCAAGTTCAAAACT+TGG | 0.504455 | 8:+79509014 | None:intergenic |
| GAGCAGAGAGAGGGAAATGG+TGG | 0.505233 | 8:-79508309 | MsG0880046885.01.T01:CDS |
| GTGGTCTGTGATTGATTTGA+AGG | 0.508732 | 8:-79508604 | MsG0880046885.01.T01:CDS |
| TCACTTTGTTGTTTATGCAA+AGG | 0.511656 | 8:+79508435 | None:intergenic |
| AAGGAGCAGAGAGAGGGAAA+TGG | 0.511826 | 8:-79508312 | MsG0880046885.01.T01:CDS |
| GGGAAATGGTGGTGGGTCTG+AGG | 0.512456 | 8:-79508298 | MsG0880046885.01.T01:CDS |
| CCGGCAAAGGAAAGCGGTGG+TGG | 0.520086 | 8:-79508372 | MsG0880046885.01.T01:CDS |
| TGTAAAAGAAAATTCTGAAG+AGG | 0.523097 | 8:-79508628 | MsG0880046885.01.T01:CDS |
| CTATCAGATCTCTGATTCAA+AGG | 0.527892 | 8:+79508174 | None:intergenic |
| CAAGGAAAATTCGAATTCGA+AGG | 0.532203 | 8:-79508562 | MsG0880046885.01.T01:CDS |
| TGAAGAGTTGAGTAGTAAGT+GGG | 0.543506 | 8:+79509166 | None:intergenic |
| CTTTGTTGTTTATGCAAAGG+AGG | 0.546200 | 8:+79508438 | None:intergenic |
| AAGTGGTTGAACACATTCAA+AGG | 0.549264 | 8:+79506925 | None:intergenic |
| ATGGTTATGCTGAGAGTACA+TGG | 0.553105 | 8:-79507129 | MsG0880046885.01.T01:CDS |
| TTGATGGGTCTTCACAAAGA+AGG | 0.556368 | 8:-79509001 | MsG0880046885.01.T01:CDS |
| TGAGCCTCCAAAACCGGCAA+AGG | 0.556752 | 8:-79508385 | MsG0880046885.01.T01:CDS |
| GTGCAAAGGTTAGCAGTACA+AGG | 0.558986 | 8:-79508696 | MsG0880046885.01.T01:CDS |
| GACAATCTATGTTCTGCAGA+AGG | 0.562579 | 8:+79509082 | None:intergenic |
| GATGCTAGAGATGTGATCGC+GGG | 0.563989 | 8:-79508663 | MsG0880046885.01.T01:CDS |
| TTGCATAAACAACAAAGTGA+AGG | 0.566433 | 8:-79508432 | MsG0880046885.01.T01:CDS |
| TTTCATAAGGAGCAGAGAGA+GGG | 0.566517 | 8:-79508318 | MsG0880046885.01.T01:CDS |
| AAGAAGAAGTTGCATTCTGA+TGG | 0.578184 | 8:-79508081 | MsG0880046885.01.T01:CDS |
| GTTTCAAGAGGCAGTTCAAG+TGG | 0.578231 | 8:+79506908 | None:intergenic |
| GATCTCTGATTCAAAGGCAA+AGG | 0.579771 | 8:+79508180 | None:intergenic |
| ACTGCCTCTTGAAACCTCAC+TGG | 0.580555 | 8:-79506900 | MsG0880046885.01.T01:three_prime_UTR |
| GGCAAACAGGAATGATCAGA+TGG | 0.583641 | 8:-79507536 | MsG0880046885.01.T01:intron |
| TCGAAGGGAAAATCAAGTCA+TGG | 0.583879 | 8:-79508546 | MsG0880046885.01.T01:CDS |
| TGCATAAACAACAAAGTGAA+GGG | 0.586261 | 8:-79508431 | MsG0880046885.01.T01:CDS |
| TGGCGACGTTGTGCTGGATG+TGG | 0.588738 | 8:-79507332 | MsG0880046885.01.T01:CDS |
| GTTTCATAAGGAGCAGAGAG+AGG | 0.594442 | 8:-79508319 | MsG0880046885.01.T01:CDS |
| ATGGGGTGTTCTTGTTCTGG+AGG | 0.602140 | 8:+79508914 | None:intergenic |
| CCATCAAGTTCAAAACTTGG+TGG | 0.605099 | 8:+79509017 | None:intergenic |
| TGACAAGAGTTTGATGAACA+AGG | 0.607590 | 8:-79508580 | MsG0880046885.01.T01:CDS |
| AAGAAAATTCTGAAGAGGAG+TGG | 0.610006 | 8:-79508623 | MsG0880046885.01.T01:CDS |
| GCTTGTCTCTTATTATGATG+GGG | 0.610177 | 8:+79508897 | None:intergenic |
| AAGGAAAATTCGAATTCGAA+GGG | 0.610585 | 8:-79508561 | MsG0880046885.01.T01:CDS |
| GCGGTGGTGGTTCGGCGAAG+AGG | 0.615543 | 8:-79508359 | MsG0880046885.01.T01:CDS |
| TCCTCCAGTGAGGTTTCAAG+AGG | 0.617533 | 8:+79506896 | None:intergenic |
| CTAAGAAACTAATTAAGCTG+AGG | 0.620665 | 8:-79507070 | MsG0880046885.01.T01:three_prime_UTR |
| CCAAAACCGGCAAAGGAAAG+CGG | 0.625068 | 8:-79508378 | MsG0880046885.01.T01:CDS |
| GCCTCTTGAAACCTCACTGG+AGG | 0.628048 | 8:-79506897 | MsG0880046885.01.T01:three_prime_UTR |
| AGAGAGAGGGAAATGGTGGT+GGG | 0.632074 | 8:-79508305 | MsG0880046885.01.T01:CDS |
| ACATGGAACTGAATAAGTTG+AGG | 0.637297 | 8:-79507112 | MsG0880046885.01.T01:exon |
| AGGGAAAACTATTCTTATGG+AGG | 0.639054 | 8:-79508412 | MsG0880046885.01.T01:CDS |
| GAATCAGAGATCTGATAGTG+AGG | 0.639484 | 8:-79508169 | MsG0880046885.01.T01:CDS |
| TGATGCTAGAGATGTGATCG+CGG | 0.643364 | 8:-79508664 | MsG0880046885.01.T01:CDS |
| ACAATTTCATCAAACAACAA+TGG | 0.645515 | 8:-79509206 | MsG0880046885.01.T01:exon |
| TGTCCGGCAACTCAAAGCGG+TGG | 0.659512 | 8:-79507240 | MsG0880046885.01.T01:CDS |
| AATTTCTACAAGAATTCCTG+TGG | 0.672196 | 8:-79507509 | MsG0880046885.01.T01:CDS |
| ATTATTAGACTCCTCCAGTG+AGG | 0.679789 | 8:+79506886 | None:intergenic |
| GGGTCTGAGGTAGAACAAAG+AGG | 0.684452 | 8:-79508285 | MsG0880046885.01.T01:CDS |
| ATGCTAGAGATGTGATCGCG+GGG | 0.686114 | 8:-79508662 | MsG0880046885.01.T01:CDS |
| TCGCCATATTTGTCACACCA+TGG | 0.686208 | 8:+79507349 | None:intergenic |
| AAACCGGCAAAGGAAAGCGG+TGG | 0.686736 | 8:-79508375 | MsG0880046885.01.T01:CDS |
| ATTTGTCCGGCAACTCAAAG+CGG | 0.701595 | 8:-79507243 | MsG0880046885.01.T01:CDS |
| TCTGAGGTAGAACAAAGAGG+AGG | 0.733285 | 8:-79508282 | MsG0880046885.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGCAAAAAGTTAAAAA+TGG | + | Chr8:79507258-79507277 | None:intergenic | 15.0% |
| !! | CAGTAGTTAAAAAAAAATTA+TGG | + | Chr8:79509228-79509247 | None:intergenic | 15.0% |
| !! | TTTGTTTGTGATTTATTAAT+AGG | - | Chr8:79508316-79508335 | MsG0880046885.01.T01:CDS | 15.0% |
| !!! | ACAAACTTTCATATATTTTA+GGG | - | Chr8:79508177-79508196 | MsG0880046885.01.T01:CDS | 15.0% |
| !!! | GTTTTTGGTTTTTTATTTTT+TGG | - | Chr8:79507278-79507297 | MsG0880046885.01.T01:CDS | 15.0% |
| !! | AAAATGGTTTAATAGTTCAT+TGG | + | Chr8:79507242-79507261 | None:intergenic | 20.0% |
| !! | GTATACTTTATGAACTAAAT+CGG | - | Chr8:79508218-79508237 | MsG0880046885.01.T01:CDS | 20.0% |
| !! | TTATCTATGAAAAAATCAGA+TGG | + | Chr8:79508016-79508035 | None:intergenic | 20.0% |
| !!! | AACTTTTTGCTTATTGTTTT+TGG | - | Chr8:79507263-79507282 | MsG0880046885.01.T01:CDS | 20.0% |
| !!! | ACTTACGAAAATTTAAGATT+AGG | + | Chr8:79508404-79508423 | None:intergenic | 20.0% |
| !!! | ATCTGATTTTTTCATAGATA+AGG | - | Chr8:79508015-79508034 | MsG0880046885.01.T01:intron | 20.0% |
| !!! | CACAAACTTTCATATATTTT+AGG | - | Chr8:79508176-79508195 | MsG0880046885.01.T01:CDS | 20.0% |
| !!! | CTTACGAAAATTTAAGATTA+GGG | + | Chr8:79508403-79508422 | None:intergenic | 20.0% |
| !!! | GTGATTTATTAATAGGTTTT+GGG | - | Chr8:79508323-79508342 | MsG0880046885.01.T01:CDS | 20.0% |
| !!! | TGTGATTTATTAATAGGTTT+TGG | - | Chr8:79508322-79508341 | MsG0880046885.01.T01:CDS | 20.0% |
| !!! | TTTATTTTTTGGACCTTATT+AGG | - | Chr8:79507289-79507308 | MsG0880046885.01.T01:CDS | 20.0% |
| ! | AAGATTACCATTCTTCTAAA+AGG | - | Chr8:79507342-79507361 | MsG0880046885.01.T01:CDS | 25.0% |
| ! | ACAATTTCATCAAACAACAA+TGG | - | Chr8:79506861-79506880 | MsG0880046885.01.T01:three_prime_UTR | 25.0% |
| ! | ATATAATGTGGTTTCAACTT+TGG | - | Chr8:79508628-79508647 | MsG0880046885.01.T01:CDS | 25.0% |
| ! | CTTCAACATGTTAATAACAA+AGG | + | Chr8:79508154-79508173 | None:intergenic | 25.0% |
| ! | GTCAACTTACTAATATAATG+TGG | - | Chr8:79508616-79508635 | MsG0880046885.01.T01:CDS | 25.0% |
| ! | TATATCCAAAATTAGCTCAA+AGG | + | Chr8:79508285-79508304 | None:intergenic | 25.0% |
| ! | TTGTTTGATGAAATTGTTTG+AGG | + | Chr8:79506858-79506877 | None:intergenic | 25.0% |
| !! | TGTAAAAGAAAATTCTGAAG+AGG | - | Chr8:79507439-79507458 | MsG0880046885.01.T01:intron | 25.0% |
| !!! | AAATTGTTTGAGGTTTTTGT+TGG | + | Chr8:79506848-79506867 | None:intergenic | 25.0% |
| AAAGACAGTGAAAAAGCAAT+GGG | - | Chr8:79507808-79507827 | MsG0880046885.01.T01:intron | 30.0% | |
| AAGCTTGTCTCTTATTATGA+TGG | + | Chr8:79507175-79507194 | None:intergenic | 30.0% | |
| AAGGAAAATTCGAATTCGAA+GGG | - | Chr8:79507506-79507525 | MsG0880046885.01.T01:CDS | 30.0% | |
| AATTTCTACAAGAATTCCTG+TGG | - | Chr8:79508558-79508577 | MsG0880046885.01.T01:CDS | 30.0% | |
| AGCTTGTCTCTTATTATGAT+GGG | + | Chr8:79507174-79507193 | None:intergenic | 30.0% | |
| AGTTCATTGGTGAATTCAAA+GGG | + | Chr8:79507229-79507248 | None:intergenic | 30.0% | |
| CATGCTAGATTGAAACATAA+TGG | + | Chr8:79508057-79508076 | None:intergenic | 30.0% | |
| CTAAGAAACTAATTAAGCTG+AGG | - | Chr8:79508997-79509016 | MsG0880046885.01.T01:CDS | 30.0% | |
| GAAATGGAAGAGAAATGAAT+TGG | - | Chr8:79507847-79507866 | MsG0880046885.01.T01:intron | 30.0% | |
| GCATAAAGTAGTTCCTAATA+AGG | + | Chr8:79507305-79507324 | None:intergenic | 30.0% | |
| TAGTTCATTGGTGAATTCAA+AGG | + | Chr8:79507230-79507249 | None:intergenic | 30.0% | |
| TCAAGAGAAAAACATTTGTC+CGG | - | Chr8:79508811-79508830 | MsG0880046885.01.T01:intron | 30.0% | |
| TGAAGGGAAAACTATTCTTA+TGG | - | Chr8:79507652-79507671 | MsG0880046885.01.T01:intron | 30.0% | |
| TGCATAAACAACAAAGTGAA+GGG | - | Chr8:79507636-79507655 | MsG0880046885.01.T01:intron | 30.0% | |
| TTATCCTGACCAAAAAGATT+TGG | + | Chr8:79508883-79508902 | None:intergenic | 30.0% | |
| TTATGAAACAAAGCCCTAAA+CGG | + | Chr8:79507737-79507756 | None:intergenic | 30.0% | |
| TTCAATCCGACAACATTAAA+TGG | - | Chr8:79507013-79507032 | MsG0880046885.01.T01:three_prime_UTR | 30.0% | |
| TTGCATAAACAACAAAGTGA+AGG | - | Chr8:79507635-79507654 | MsG0880046885.01.T01:intron | 30.0% | |
| TTTGGGAAACAACATAAAGA+AGG | - | Chr8:79508340-79508359 | MsG0880046885.01.T01:CDS | 30.0% | |
| ! | AACGTTCATCCAAATCTTTT+TGG | - | Chr8:79508871-79508890 | MsG0880046885.01.T01:intron | 30.0% |
| ! | ATTAGTAAGTTGACTCACTT+GGG | + | Chr8:79508610-79508629 | None:intergenic | 30.0% |
| ! | CAGCTTAATTAGTTTCTTAG+AGG | + | Chr8:79508997-79509016 | None:intergenic | 30.0% |
| ! | CTAGATTGAAACATAATGGA+AGG | + | Chr8:79508053-79508072 | None:intergenic | 30.0% |
| ! | TATTAGTAAGTTGACTCACT+TGG | + | Chr8:79508611-79508630 | None:intergenic | 30.0% |
| ! | TTGTTGCCATTTAATGTTGT+CGG | + | Chr8:79507022-79507041 | None:intergenic | 30.0% |
| ! | TTTGAAGTTGAAAGGAAGAA+TGG | + | Chr8:79506953-79506972 | None:intergenic | 30.0% |
| !! | TCACTTTGTTGTTTATGCAA+AGG | + | Chr8:79507635-79507654 | None:intergenic | 30.0% |
| !! | TCAGCTTTGAAACAGATTAA+AGG | - | Chr8:79507545-79507564 | MsG0880046885.01.T01:intron | 30.0% |
| !!! | GAACGTTTTTTGAAGTTGAA+AGG | + | Chr8:79506961-79506980 | None:intergenic | 30.0% |
| AAGAAGAAGTTGCATTCTGA+TGG | - | Chr8:79507986-79508005 | MsG0880046885.01.T01:intron | 35.0% | |
| AAGACAGTGAAAAAGCAATG+GGG | - | Chr8:79507809-79507828 | MsG0880046885.01.T01:intron | 35.0% | |
| AAGTGGTTGAACACATTCAA+AGG | + | Chr8:79509145-79509164 | None:intergenic | 35.0% | |
| ACATGGAACTGAATAAGTTG+AGG | - | Chr8:79508955-79508974 | MsG0880046885.01.T01:CDS | 35.0% | |
| AGGGAAAACTATTCTTATGG+AGG | - | Chr8:79507655-79507674 | MsG0880046885.01.T01:intron | 35.0% | |
| ATGAAGAGTTGAGTAGTAAG+TGG | + | Chr8:79506905-79506924 | None:intergenic | 35.0% | |
| CAAAAACCACGTTGAAGAAA+TGG | - | Chr8:79508771-79508790 | MsG0880046885.01.T01:intron | 35.0% | |
| CAACTTCTTCTTGATCAACT+TGG | + | Chr8:79507978-79507997 | None:intergenic | 35.0% | |
| CAAGGAAAATTCGAATTCGA+AGG | - | Chr8:79507505-79507524 | MsG0880046885.01.T01:CDS | 35.0% | |
| CTATCAGATCTCTGATTCAA+AGG | + | Chr8:79507896-79507915 | None:intergenic | 35.0% | |
| GAAAGACAGTGAAAAAGCAA+TGG | - | Chr8:79507807-79507826 | MsG0880046885.01.T01:intron | 35.0% | |
| GCTTGTCTCTTATTATGATG+GGG | + | Chr8:79507173-79507192 | None:intergenic | 35.0% | |
| TGAAGAGTTGAGTAGTAAGT+GGG | + | Chr8:79506904-79506923 | None:intergenic | 35.0% | |
| TGACAAGAGTTTGATGAACA+AGG | - | Chr8:79507487-79507506 | MsG0880046885.01.T01:CDS | 35.0% | |
| TTCTTGATCAACTTGGTATC+TGG | + | Chr8:79507971-79507990 | None:intergenic | 35.0% | |
| ! | AACATCAATCCATTTTCGCA+TGG | - | Chr8:79508919-79508938 | MsG0880046885.01.T01:CDS | 35.0% |
| ! | AAGAAAATTCTGAAGAGGAG+TGG | - | Chr8:79507444-79507463 | MsG0880046885.01.T01:intron | 35.0% |
| ! | CTCATCCTTTGAGCTAATTT+TGG | - | Chr8:79508277-79508296 | MsG0880046885.01.T01:CDS | 35.0% |
| ! | TGTTTTCCATTTCTTCAACG+TGG | + | Chr8:79508780-79508799 | None:intergenic | 35.0% |
| ! | TTAGTAAGTTGACTCACTTG+GGG | + | Chr8:79508609-79508628 | None:intergenic | 35.0% |
| ! | TTCAAATCAGCTTTATCCAC+AGG | + | Chr8:79508577-79508596 | None:intergenic | 35.0% |
| ! | TTCTGGAGGAGAAGAAATAA+GGG | + | Chr8:79507142-79507161 | None:intergenic | 35.0% |
| !! | AAGAATGGTTTTGCAGAAAG+AGG | + | Chr8:79506938-79506957 | None:intergenic | 35.0% |
| !! | AATGTAACATTTGCTGTGTG+TGG | - | Chr8:79508509-79508528 | MsG0880046885.01.T01:CDS | 35.0% |
| !! | ATGTAACATTTGCTGTGTGT+GGG | - | Chr8:79508510-79508529 | MsG0880046885.01.T01:CDS | 35.0% |
| !! | CTTTGTTGTTTATGCAAAGG+AGG | + | Chr8:79507632-79507651 | None:intergenic | 35.0% |
| !! | GGTTTGATGGATTGAAGAAA+TGG | - | Chr8:79507831-79507850 | MsG0880046885.01.T01:intron | 35.0% |
| !! | GTTTAGGGCTTTGTTTCATA+AGG | - | Chr8:79507736-79507755 | MsG0880046885.01.T01:intron | 35.0% |
| !! | TCATCCAAATCTTTTTGGTC+AGG | - | Chr8:79508876-79508895 | MsG0880046885.01.T01:intron | 35.0% |
| !!! | CACCAAGTTTTGAACTTGAT+GGG | - | Chr8:79507051-79507070 | MsG0880046885.01.T01:three_prime_UTR | 35.0% |
| AAAAAGCAATGGGGGTTTGA+TGG | - | Chr8:79507818-79507837 | MsG0880046885.01.T01:intron | 40.0% | |
| ACAGATTAAAGGAGCAGCTT+CGG | - | Chr8:79507556-79507575 | MsG0880046885.01.T01:intron | 40.0% | |
| AGACAGTGAAAAAGCAATGG+GGG | - | Chr8:79507810-79507829 | MsG0880046885.01.T01:intron | 40.0% | |
| AGACCATGGTGTGACAAATA+TGG | - | Chr8:79508715-79508734 | MsG0880046885.01.T01:CDS | 40.0% | |
| ATTATTAGACTCCTCCAGTG+AGG | + | Chr8:79509184-79509203 | None:intergenic | 40.0% | |
| CCATCAAGTTCAAAACTTGG+TGG | + | Chr8:79507053-79507072 | None:intergenic | 40.0% | |
| GACAATCTATGTTCTGCAGA+AGG | + | Chr8:79506988-79507007 | None:intergenic | 40.0% | |
| GACCCATCAAGTTCAAAACT+TGG | + | Chr8:79507056-79507075 | None:intergenic | 40.0% | |
| GATCTCTGATTCAAAGGCAA+AGG | + | Chr8:79507890-79507909 | None:intergenic | 40.0% | |
| GTCTAATGTGTTGAAGACCA+TGG | - | Chr8:79508701-79508720 | MsG0880046885.01.T01:CDS | 40.0% | |
| TCAGCATAACCATGCGAAAA+TGG | + | Chr8:79508931-79508950 | None:intergenic | 40.0% | |
| TCGAAGGGAAAATCAAGTCA+TGG | - | Chr8:79507521-79507540 | MsG0880046885.01.T01:CDS | 40.0% | |
| TTTCATAAGGAGCAGAGAGA+GGG | - | Chr8:79507749-79507768 | MsG0880046885.01.T01:intron | 40.0% | |
| ! | ATGGTTATGCTGAGAGTACA+TGG | - | Chr8:79508938-79508957 | MsG0880046885.01.T01:CDS | 40.0% |
| ! | CCATTCTTCTAAAAGGCCAT+TGG | - | Chr8:79507349-79507368 | MsG0880046885.01.T01:CDS | 40.0% |
| ! | GAATCAGAGATCTGATAGTG+AGG | - | Chr8:79507898-79507917 | MsG0880046885.01.T01:intron | 40.0% |
| ! | TTGATGGGTCTTCACAAAGA+AGG | - | Chr8:79507066-79507085 | MsG0880046885.01.T01:three_prime_UTR | 40.0% |
| !! | CCAATGGCCTTTTAGAAGAA+TGG | + | Chr8:79507352-79507371 | None:intergenic | 40.0% |
| !! | GTGGTCTGTGATTGATTTGA+AGG | - | Chr8:79507463-79507482 | MsG0880046885.01.T01:intron | 40.0% |
| !! | GTTCTGGAGGAGAAGAAATA+AGG | + | Chr8:79507143-79507162 | None:intergenic | 40.0% |
| !!! | AGACAAGCTTCTGTTTTTGC+AGG | - | Chr8:79507185-79507204 | MsG0880046885.01.T01:CDS | 40.0% |
| !!! | CCACCAAGTTTTGAACTTGA+TGG | - | Chr8:79507050-79507069 | MsG0880046885.01.T01:three_prime_UTR | 40.0% |
| ACTGCTAACCTTTGCACCAA+TGG | + | Chr8:79507368-79507387 | None:intergenic | 45.0% | |
| ATTTGTCCGGCAACTCAAAG+CGG | - | Chr8:79508824-79508843 | MsG0880046885.01.T01:intron | 45.0% | |
| CTAAAAGGCCATTGGTGCAA+AGG | - | Chr8:79507357-79507376 | MsG0880046885.01.T01:intron | 45.0% | |
| GGCAAACAGGAATGATCAGA+TGG | - | Chr8:79508531-79508550 | MsG0880046885.01.T01:CDS | 45.0% | |
| GTAGTAAGTGGGTGTGTAGT+TGG | + | Chr8:79506893-79506912 | None:intergenic | 45.0% | |
| GTGCAAAGGTTAGCAGTACA+AGG | - | Chr8:79507371-79507390 | MsG0880046885.01.T01:intron | 45.0% | |
| GTTTCAAGAGGCAGTTCAAG+TGG | + | Chr8:79509162-79509181 | None:intergenic | 45.0% | |
| GTTTCATAAGGAGCAGAGAG+AGG | - | Chr8:79507748-79507767 | MsG0880046885.01.T01:intron | 45.0% | |
| TCGCCATATTTGTCACACCA+TGG | + | Chr8:79508721-79508740 | None:intergenic | 45.0% | |
| TGATGCTAGAGATGTGATCG+CGG | - | Chr8:79507403-79507422 | MsG0880046885.01.T01:intron | 45.0% | |
| TGTGCTGGATGTGGTGAAAA+AGG | - | Chr8:79508744-79508763 | MsG0880046885.01.T01:CDS | 45.0% | |
| ! | AAAGGAGCAGCTTCGGTTTT+CGG | - | Chr8:79507563-79507582 | MsG0880046885.01.T01:intron | 45.0% |
| ! | ATGATGGGGTGTTCTTGTTC+TGG | + | Chr8:79507159-79507178 | None:intergenic | 45.0% |
| ! | CAGTCTTTTGCAAGAGCAGT+TGG | - | Chr8:79507938-79507957 | MsG0880046885.01.T01:intron | 45.0% |
| ! | TCTGAGGTAGAACAAAGAGG+AGG | - | Chr8:79507785-79507804 | MsG0880046885.01.T01:intron | 45.0% |
| ! | TTGTGCTGCTAAGTTCTGTC+TGG | + | Chr8:79508379-79508398 | None:intergenic | 45.0% |
| !! | TTTGCAAGAGCAGTTGGTGA+TGG | - | Chr8:79507944-79507963 | MsG0880046885.01.T01:intron | 45.0% |
| AAGGAGCAGAGAGAGGGAAA+TGG | - | Chr8:79507755-79507774 | MsG0880046885.01.T01:intron | 50.0% | |
| ACTGCCTCTTGAAACCTCAC+TGG | - | Chr8:79509167-79509186 | MsG0880046885.01.T01:CDS | 50.0% | |
| AGAGAGAGGGAAATGGTGGT+GGG | - | Chr8:79507762-79507781 | MsG0880046885.01.T01:intron | 50.0% | |
| ATGCTAGAGATGTGATCGCG+GGG | - | Chr8:79507405-79507424 | MsG0880046885.01.T01:intron | 50.0% | |
| CAAATATGGCGACGTTGTGC+TGG | - | Chr8:79508729-79508748 | MsG0880046885.01.T01:CDS | 50.0% | |
| CCAAAACCGGCAAAGGAAAG+CGG | - | Chr8:79507689-79507708 | MsG0880046885.01.T01:CDS | 50.0% | |
| GATGCTAGAGATGTGATCGC+GGG | - | Chr8:79507404-79507423 | MsG0880046885.01.T01:intron | 50.0% | |
| GGAAAGTGAGCCTCCAAAAC+CGG | - | Chr8:79507676-79507695 | MsG0880046885.01.T01:CDS | 50.0% | |
| GGCGAAGAGGAAACCGTTTA+GGG | - | Chr8:79507721-79507740 | MsG0880046885.01.T01:CDS | 50.0% | |
| TCCTCCAGTGAGGTTTCAAG+AGG | + | Chr8:79509174-79509193 | None:intergenic | 50.0% | |
| ! | AAAGGAAAGCGGTGGTGGTT+CGG | - | Chr8:79507700-79507719 | MsG0880046885.01.T01:CDS | 50.0% |
| ! | ATGGGGTGTTCTTGTTCTGG+AGG | + | Chr8:79507156-79507175 | None:intergenic | 50.0% |
| ! | GGGTCTGAGGTAGAACAAAG+AGG | - | Chr8:79507782-79507801 | MsG0880046885.01.T01:intron | 50.0% |
| ! | TTTGCTGTGTGTGGGCAAAC+AGG | - | Chr8:79508518-79508537 | MsG0880046885.01.T01:CDS | 50.0% |
| !!! | CTTTCCTTTGCCGGTTTTGG+AGG | + | Chr8:79507689-79507708 | None:intergenic | 50.0% |
| AAACCGGCAAAGGAAAGCGG+TGG | - | Chr8:79507692-79507711 | MsG0880046885.01.T01:CDS | 55.0% | |
| CAGAGAGAGGGAAATGGTGG+TGG | - | Chr8:79507761-79507780 | MsG0880046885.01.T01:intron | 55.0% | |
| CGGCGAAGAGGAAACCGTTT+AGG | - | Chr8:79507720-79507739 | MsG0880046885.01.T01:CDS | 55.0% | |
| GAGCAGAGAGAGGGAAATGG+TGG | - | Chr8:79507758-79507777 | MsG0880046885.01.T01:intron | 55.0% | |
| GCCTCTTGAAACCTCACTGG+AGG | - | Chr8:79509170-79509189 | MsG0880046885.01.T01:CDS | 55.0% | |
| TGAGCCTCCAAAACCGGCAA+AGG | - | Chr8:79507682-79507701 | MsG0880046885.01.T01:CDS | 55.0% | |
| !! | TGTCCACCGCTTTGAGTTGC+CGG | + | Chr8:79508833-79508852 | None:intergenic | 55.0% |
| !!! | CCGCTTTCCTTTGCCGGTTT+TGG | + | Chr8:79507692-79507711 | None:intergenic | 55.0% |
| CCACCACCGCTTTCCTTTGC+CGG | + | Chr8:79507698-79507717 | None:intergenic | 60.0% | |
| TGGCGACGTTGTGCTGGATG+TGG | - | Chr8:79508735-79508754 | MsG0880046885.01.T01:CDS | 60.0% | |
| TGTCCGGCAACTCAAAGCGG+TGG | - | Chr8:79508827-79508846 | MsG0880046885.01.T01:intron | 60.0% | |
| !! | GGGAAATGGTGGTGGGTCTG+AGG | - | Chr8:79507769-79507788 | MsG0880046885.01.T01:intron | 60.0% |
| CCGGCAAAGGAAAGCGGTGG+TGG | - | Chr8:79507695-79507714 | MsG0880046885.01.T01:CDS | 65.0% | |
| ! | GCGGTGGTGGTTCGGCGAAG+AGG | - | Chr8:79507708-79507727 | MsG0880046885.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 79506805 | 79509284 | 79506805 | ID=MsG0880046885.01;Name=MsG0880046885.01 |
| Chr8 | mRNA | 79506805 | 79509284 | 79506805 | ID=MsG0880046885.01.T01;Parent=MsG0880046885.01;Name=MsG0880046885.01.T01;_AED=0.15;_eAED=0.15;_QI=75|1|1|1|1|1|5|318|484 |
| Chr8 | exon | 79506805 | 79507372 | 79506805 | ID=MsG0880046885.01.T01:exon:34399;Parent=MsG0880046885.01.T01 |
| Chr8 | exon | 79507478 | 79507549 | 79507478 | ID=MsG0880046885.01.T01:exon:34398;Parent=MsG0880046885.01.T01 |
| Chr8 | exon | 79507672 | 79507751 | 79507672 | ID=MsG0880046885.01.T01:exon:34397;Parent=MsG0880046885.01.T01 |
| Chr8 | exon | 79508053 | 79508778 | 79508053 | ID=MsG0880046885.01.T01:exon:34396;Parent=MsG0880046885.01.T01 |
| Chr8 | exon | 79508883 | 79509284 | 79508883 | ID=MsG0880046885.01.T01:exon:34395;Parent=MsG0880046885.01.T01 |
| Chr8 | five_prime_UTR | 79509210 | 79509284 | 79509210 | ID=MsG0880046885.01.T01:five_prime_utr;Parent=MsG0880046885.01.T01 |
| Chr8 | CDS | 79508883 | 79509209 | 79508883 | ID=MsG0880046885.01.T01:cds;Parent=MsG0880046885.01.T01 |
| Chr8 | CDS | 79508053 | 79508778 | 79508053 | ID=MsG0880046885.01.T01:cds;Parent=MsG0880046885.01.T01 |
| Chr8 | CDS | 79507672 | 79507751 | 79507672 | ID=MsG0880046885.01.T01:cds;Parent=MsG0880046885.01.T01 |
| Chr8 | CDS | 79507478 | 79507549 | 79507478 | ID=MsG0880046885.01.T01:cds;Parent=MsG0880046885.01.T01 |
| Chr8 | CDS | 79507123 | 79507372 | 79507123 | ID=MsG0880046885.01.T01:cds;Parent=MsG0880046885.01.T01 |
| Chr8 | three_prime_UTR | 79506805 | 79507122 | 79506805 | ID=MsG0880046885.01.T01:three_prime_utr;Parent=MsG0880046885.01.T01 |
| Gene Sequence |
| Protein sequence |
