AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046208.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046208.01.T01 MTR_4g102790 98.233 679 9 2 1 678 1 677 0.0 1374
MsG0880046208.01.T01 MTR_7g027190 37.722 395 223 7 281 662 288 672 9.33e-81 270
MsG0880046208.01.T01 MTR_7g074650 36.856 369 215 10 297 664 442 793 3.43e-63 224
MsG0880046208.01.T01 MTR_1g069725 33.810 420 247 11 256 663 63 463 1.11e-58 205
MsG0880046208.01.T01 MTR_5g094450 33.418 395 227 10 286 662 155 531 6.79e-58 204
MsG0880046208.01.T01 MTR_4g104020 34.367 387 233 13 287 662 143 519 8.40e-57 201
MsG0880046208.01.T01 MTR_8g442410 29.259 499 317 12 185 662 41 524 4.06e-56 200
MsG0880046208.01.T01 MTR_3g065980 31.328 399 236 8 282 662 161 539 1.10e-55 199
MsG0880046208.01.T01 MTR_3g089055 36.126 382 217 14 293 662 203 569 1.55e-55 199
MsG0880046208.01.T01 MTR_3g089055 36.126 382 217 14 293 662 198 564 2.16e-55 199
MsG0880046208.01.T01 MTR_1g096030 33.088 408 226 14 283 662 70 458 9.47e-55 194
MsG0880046208.01.T01 MTR_4g076140 28.689 488 266 11 236 662 2 468 4.44e-54 192
MsG0880046208.01.T01 MTR_1g029420 35.079 382 221 13 293 662 225 591 4.63e-54 196
MsG0880046208.01.T01 MTR_2g082090 32.282 412 244 13 269 662 184 578 3.48e-53 192
MsG0880046208.01.T01 MTR_5g097480 33.508 382 233 11 290 662 174 543 5.11e-53 191
MsG0880046208.01.T01 MTR_3g056110 30.769 403 249 9 273 662 156 541 8.84e-51 185
MsG0880046208.01.T01 MTR_3g022830 27.725 422 240 9 294 662 26 435 3.42e-47 173
MsG0880046208.01.T01 MTR_4g076020 33.245 376 216 14 297 667 88 433 4.52e-47 172
MsG0880046208.01.T01 MTR_2g097410 28.979 421 274 11 258 664 333 742 5.80e-46 175
MsG0880046208.01.T01 MTR_4g133660 29.610 385 249 9 288 662 170 542 4.84e-45 169
MsG0880046208.01.T01 MTR_2g097310 26.302 384 263 8 289 664 268 639 6.06e-45 171
MsG0880046208.01.T01 MTR_2g026250 28.319 452 299 12 221 662 159 595 1.32e-44 169
MsG0880046208.01.T01 MTR_2g097380 27.763 371 223 9 300 664 231 562 6.55e-44 166
MsG0880046208.01.T01 MTR_4g097080 27.249 389 251 9 292 664 132 504 7.12e-44 165
MsG0880046208.01.T01 MTR_4g077760 31.152 382 237 12 290 662 190 554 9.10e-44 166
MsG0880046208.01.T01 MTR_2g097390 26.684 386 259 9 289 664 271 642 1.92e-43 166
MsG0880046208.01.T01 MTR_4g064160 27.040 429 288 10 250 664 268 685 2.05e-41 160
MsG0880046208.01.T01 MTR_4g064120 27.404 416 274 11 266 664 223 627 6.43e-41 159
MsG0880046208.01.T01 MTR_2g097463 24.031 516 326 12 197 664 159 656 1.61e-40 158
MsG0880046208.01.T01 MTR_4g064150 27.273 407 268 12 274 665 342 735 1.81e-40 158
MsG0880046208.01.T01 MTR_5g009080 32.443 262 166 2 239 500 9 259 1.88e-40 155
MsG0880046208.01.T01 MTR_5g009080 33.333 153 95 5 511 662 331 477 6.12e-19 90.9
MsG0880046208.01.T01 MTR_5g058860 31.785 409 239 16 279 663 105 497 2.49e-40 155
MsG0880046208.01.T01 MTR_3g072710 31.127 408 237 16 283 663 110 500 3.08e-40 155
MsG0880046208.01.T01 MTR_2g097350 25.515 388 261 7 289 664 270 641 3.87e-40 156
MsG0880046208.01.T01 MTR_4g064180 27.525 396 263 10 282 664 243 627 4.58e-40 156
MsG0880046208.01.T01 MTR_5g015490 28.608 388 253 11 292 664 113 491 9.05e-40 153
MsG0880046208.01.T01 MTR_4g064200 26.494 385 261 9 289 664 280 651 1.31e-39 155
MsG0880046208.01.T01 MTR_2g034250 28.109 402 268 10 276 665 195 587 1.98e-39 154
MsG0880046208.01.T01 MTR_2g034260 27.930 401 263 11 276 662 195 583 1.77e-37 148
MsG0880046208.01.T01 MTR_2g034280 27.820 399 264 12 276 662 188 574 2.06e-37 147
MsG0880046208.01.T01 MTR_2g097467 24.936 389 265 9 287 664 283 655 2.82e-37 148
MsG0880046208.01.T01 MTR_7g062120 24.936 389 264 8 289 664 368 741 9.74e-37 147
MsG0880046208.01.T01 MTR_8g093070 29.383 405 241 16 278 666 124 499 2.86e-36 143
MsG0880046208.01.T01 MTR_7g109580 26.992 389 263 10 282 662 178 553 8.58e-36 142
MsG0880046208.01.T01 MTR_2g089100 25.616 406 261 10 293 667 52 447 1.23e-35 140
MsG0880046208.01.T01 MTR_2g097473 24.524 420 279 11 267 664 252 655 3.84e-35 142
MsG0880046208.01.T01 MTR_1g086970 24.510 408 290 11 264 662 79 477 4.13e-34 136
MsG0880046208.01.T01 MTR_2g099110 25.679 405 242 10 293 664 74 452 5.22e-32 130
MsG0880046208.01.T01 MTR_7g057230 34.221 263 160 10 405 662 402 656 2.23e-31 130
MsG0880046208.01.T01 MTR_5g015950 24.048 420 264 13 293 664 35 447 1.76e-25 110
MsG0880046208.01.T01 MTR_3g053270 24.048 420 264 13 293 664 35 447 1.76e-25 110
MsG0880046208.01.T01 MTR_6g047750 32.222 270 162 10 405 662 401 661 1.81e-25 112
MsG0880046208.01.T01 MTR_4g026485 25.526 380 246 11 294 662 270 623 7.76e-25 110
MsG0880046208.01.T01 MTR_0092s0100 24.814 403 277 9 266 662 348 730 2.43e-23 105
MsG0880046208.01.T01 MTR_0092s0100 24.378 402 280 7 266 662 345 727 2.55e-23 105
MsG0880046208.01.T01 MTR_4g095500 22.673 419 269 13 293 664 59 469 4.71e-19 91.3
MsG0880046208.01.T01 MTR_8g077940 27.577 359 218 14 319 662 209 540 3.33e-17 85.9
MsG0880046208.01.T01 MTR_8g020840 23.786 412 237 15 293 662 171 547 1.32e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046208.01.T01 AT1G63100 55.920 701 224 23 1 663 1 654 0.0 690
MsG0880046208.01.T01 AT1G63100 53.780 701 214 21 1 663 1 629 0.0 657
MsG0880046208.01.T01 AT1G66350 34.961 389 218 11 282 662 144 505 5.29e-67 229
MsG0880046208.01.T01 AT2G01570 35.990 389 220 11 282 662 213 580 2.12e-65 226
MsG0880046208.01.T01 AT1G50420 32.360 445 231 10 279 662 43 478 5.25e-65 223
MsG0880046208.01.T01 AT1G14920 35.219 389 223 11 282 662 161 528 7.92e-65 224
MsG0880046208.01.T01 AT3G54220 34.949 392 238 8 273 664 277 651 1.50e-64 226
MsG0880046208.01.T01 AT3G03450 33.162 389 236 11 282 662 172 544 1.63e-61 215
MsG0880046208.01.T01 AT5G17490 33.073 384 233 11 284 662 151 515 7.50e-60 210
MsG0880046208.01.T01 AT5G41920 35.641 390 228 13 278 662 28 399 3.76e-59 205
MsG0880046208.01.T01 AT1G55580 35.036 411 222 12 290 662 41 444 3.85e-53 189
MsG0880046208.01.T01 AT5G48150 32.225 391 229 13 289 662 118 489 1.18e-48 178
MsG0880046208.01.T01 AT5G48150 32.225 391 229 13 289 662 118 489 1.18e-48 178
MsG0880046208.01.T01 AT5G48150 32.225 391 229 13 289 662 118 489 1.18e-48 178
MsG0880046208.01.T01 AT5G48150 32.225 391 229 13 289 662 118 489 1.18e-48 178
MsG0880046208.01.T01 AT5G66770 32.172 373 217 12 302 662 235 583 1.35e-48 180
MsG0880046208.01.T01 AT2G04890 32.540 378 237 12 289 662 49 412 5.59e-48 174
MsG0880046208.01.T01 AT1G50600 31.552 393 242 12 285 662 145 525 9.79e-48 176
MsG0880046208.01.T01 AT1G50600 31.980 394 239 13 285 662 216 596 2.92e-47 176
MsG0880046208.01.T01 AT1G50600 31.980 394 239 13 285 662 220 600 3.91e-47 176
MsG0880046208.01.T01 AT4G17230 32.041 387 240 10 288 664 153 526 2.09e-46 173
MsG0880046208.01.T01 AT4G17230 32.041 387 240 10 288 664 153 526 2.09e-46 173
MsG0880046208.01.T01 AT1G21450 30.900 411 256 11 268 662 194 592 1.49e-45 171
MsG0880046208.01.T01 AT3G50650 32.609 368 209 14 313 662 195 541 1.73e-42 162
MsG0880046208.01.T01 AT2G29065 31.026 390 241 13 292 664 251 629 1.79e-42 163
MsG0880046208.01.T01 AT2G29060 27.619 420 265 12 258 665 265 657 2.64e-41 160
MsG0880046208.01.T01 AT2G29060 27.619 420 265 12 258 665 302 694 3.24e-41 160
MsG0880046208.01.T01 AT1G07530 27.979 386 257 10 289 664 392 766 1.85e-40 159
MsG0880046208.01.T01 AT1G07520 28.536 403 253 16 282 664 143 530 3.32e-40 155
MsG0880046208.01.T01 AT1G07520 28.536 403 253 16 282 664 143 530 3.32e-40 155
MsG0880046208.01.T01 AT1G07520 28.536 403 253 16 282 664 307 694 8.78e-40 156
MsG0880046208.01.T01 AT1G07520 28.536 403 253 16 282 664 308 695 9.52e-40 156
MsG0880046208.01.T01 AT5G59450 25.887 479 310 14 220 666 136 601 1.77e-39 154
MsG0880046208.01.T01 AT4G37650 27.481 393 258 9 292 664 145 530 3.71e-39 152
MsG0880046208.01.T01 AT4G08250 28.856 402 250 14 279 662 93 476 4.17e-39 151
MsG0880046208.01.T01 AT3G46600 26.877 413 269 10 261 664 192 580 1.44e-36 145
MsG0880046208.01.T01 AT3G46600 28.010 382 254 9 292 664 3 372 2.28e-36 141
MsG0880046208.01.T01 AT3G46600 27.119 413 273 10 268 664 148 548 4.58e-36 143
MsG0880046208.01.T01 AT2G37650 25.700 393 254 11 289 664 331 702 3.77e-32 133
MsG0880046208.01.T01 AT2G37650 25.700 393 254 11 289 664 343 714 4.43e-32 133
MsG0880046208.01.T01 AT5G52510 29.283 321 193 10 367 662 328 639 2.68e-27 117
MsG0880046208.01.T01 AT3G49950 26.700 397 251 12 293 665 30 410 4.50e-26 111
MsG0880046208.01.T01 AT4G00150 28.011 357 222 12 312 662 226 553 2.99e-25 110
MsG0880046208.01.T01 AT3G60630 27.036 307 199 10 369 662 327 621 6.18e-24 107
MsG0880046208.01.T01 AT2G45160 27.302 315 185 11 369 662 347 638 1.16e-21 100
MsG0880046208.01.T01 AT4G36710 23.650 389 261 12 287 662 119 484 1.83e-18 89.4
MsG0880046208.01.T01 AT3G13840 24.939 413 250 18 275 662 132 509 3.22e-17 85.9

Find 171 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCATTTCATTGCAAAAT+TGG 0.138280 8:-70573187 MsG0880046208.01.T01:CDS
CCTTTCTCTTTGAATTGTTC+TGG 0.202054 8:-70573585 MsG0880046208.01.T01:CDS
ACTGGTTGTGTTGATGCTAT+TGG 0.221753 8:-70573231 MsG0880046208.01.T01:CDS
GTAACAAAGATCACCAATTT+TGG 0.231391 8:-70573477 MsG0880046208.01.T01:CDS
CTGCTGCTGTTCTTGACTTC+AGG 0.245846 8:+70573909 None:intergenic
AGATCAAGGATGAGGAGTTT+TGG 0.247813 8:-70573818 MsG0880046208.01.T01:CDS
AGTTTCAGTTTGGCACAATT+TGG 0.253074 8:-70573669 MsG0880046208.01.T01:CDS
TTGGAGAGGCACCAGAGTTT+TGG 0.253860 8:-70572346 MsG0880046208.01.T01:CDS
CTCTCTACACAGTATCTTCT+TGG 0.270369 8:-70572150 MsG0880046208.01.T01:CDS
TGTCACCAACTCACAGATTA+AGG 0.272810 8:-70574082 MsG0880046208.01.T01:CDS
AACCATTTCATTGCAAAATT+GGG 0.272931 8:-70573186 MsG0880046208.01.T01:CDS
CTGGTTGTGTTGATGCTATT+GGG 0.293519 8:-70573230 MsG0880046208.01.T01:CDS
AAATAGAGCTAAGAGGAAAA+AGG 0.307901 8:-70573733 MsG0880046208.01.T01:CDS
ATAAGCACAAATTCGGCTTA+TGG 0.317498 8:+70573137 None:intergenic
GCTTGCAGAACATGGATCTT+TGG 0.333074 8:-70573769 MsG0880046208.01.T01:CDS
CAATCCTACAATTGTTGTTA+TGG 0.340164 8:-70572560 MsG0880046208.01.T01:CDS
TGGACACCGGTTGACGTTGC+TGG 0.348429 8:-70572130 MsG0880046208.01.T01:CDS
CATGAAGAGGGTAATGGTTC+GGG 0.351755 8:-70573345 MsG0880046208.01.T01:CDS
TGCCTTTGTCTAACAATCCT+TGG 0.358700 8:-70573512 MsG0880046208.01.T01:CDS
AATACATCTTCAACAGAAAC+TGG 0.362646 8:+70572248 None:intergenic
TCAGTTCCTTCATGCTGATA+AGG 0.365523 8:+70573318 None:intergenic
CGATGTGAAATGAATAAACT+TGG 0.365817 8:+70572969 None:intergenic
TCTGCCATAACAACAATTGT+AGG 0.376086 8:+70572556 None:intergenic
GTGGCTACCCTCACCAAAAT+TGG 0.379531 8:+70573464 None:intergenic
AATCTCTGTGTGCTCATTGA+TGG 0.381588 8:+70574017 None:intergenic
AATTTGGAGCTGGAAACTTT+TGG 0.382164 8:-70573653 MsG0880046208.01.T01:CDS
TGAAAGGGAAAGTTTCAGTT+TGG 0.386013 8:-70573679 MsG0880046208.01.T01:CDS
CGGTAAAATAAGCACAAATT+CGG 0.394214 8:+70573130 None:intergenic
GGAGCAACAGCACTTACTTT+GGG 0.396486 8:-70572187 MsG0880046208.01.T01:CDS
ATCAATGAGCACACAGAGAT+TGG 0.409860 8:-70574015 MsG0880046208.01.T01:CDS
GATGCATGGGAGTCACTGAT+AGG 0.410356 8:-70572285 MsG0880046208.01.T01:CDS
GACTTGAAGATGTAAGGCTT+TGG 0.411643 8:-70572702 MsG0880046208.01.T01:CDS
TGTTCCAAAGTTTAGCTTCA+AGG 0.419556 8:-70572858 MsG0880046208.01.T01:CDS
CCATCAGAGTCACTAGGCTT+TGG 0.420891 8:-70573098 MsG0880046208.01.T01:CDS
AGCAACAACTGCTCAGACAT+TGG 0.422074 8:-70573844 MsG0880046208.01.T01:CDS
TCTTCAAGTCTGTCGACTAC+TGG 0.429762 8:+70572715 None:intergenic
TCGAACATGGCTTGGAGGAT+TGG 0.430304 8:+70572834 None:intergenic
ACATGAAGAGGGTAATGGTT+CGG 0.431411 8:-70573346 MsG0880046208.01.T01:CDS
TTCGCAGCAGCCGTTGAGGC+CGG 0.436828 8:-70573952 MsG0880046208.01.T01:CDS
AGGAGCAACAGCACTTACTT+TGG 0.437760 8:-70572188 MsG0880046208.01.T01:CDS
AGAGTCAGAGTTTGAGCCTA+AGG 0.440522 8:-70573389 MsG0880046208.01.T01:CDS
GACTCTGATGGCTAAGGCTT+CGG 0.442125 8:+70573110 None:intergenic
GCAACAACTGCTCAGACATT+GGG 0.444891 8:-70573843 MsG0880046208.01.T01:CDS
AGATGTTAGCTAGGGAGATA+AGG 0.446179 8:-70572399 MsG0880046208.01.T01:CDS
AAGCAAGAGCTGAATGAAAC+CGG 0.462075 8:-70572790 MsG0880046208.01.T01:CDS
AAATGAATAAACTTGGGAAT+TGG 0.465517 8:+70572976 None:intergenic
GTTCTCTGCAGCAGAACATT+CGG 0.465680 8:-70573878 MsG0880046208.01.T01:CDS
TGGCCCTTGAAGCTAAACTT+TGG 0.467104 8:+70572854 None:intergenic
CCAGAACAATTCAAAGAGAA+AGG 0.469406 8:+70573585 None:intergenic
GAGCTTCCAGCAACGTCAAC+CGG 0.470552 8:+70572124 None:intergenic
TTGTTCTGGAGATGAGGAAA+GGG 0.476638 8:-70573571 MsG0880046208.01.T01:CDS
GAAACCGGAGACAGACTTGC+TGG 0.481646 8:-70572775 MsG0880046208.01.T01:CDS
CATAACAACAATTGTAGGAT+TGG 0.483005 8:+70572561 None:intergenic
AGATAGAGGAGATGTTAGCT+AGG 0.487005 8:-70572408 MsG0880046208.01.T01:CDS
CCAAGCCATGTTCGAATCAC+GGG 0.489720 8:-70572826 MsG0880046208.01.T01:CDS
TGATCACAGTGGCCTTCCAC+TGG 0.491665 8:-70572449 MsG0880046208.01.T01:CDS
TCAGACATTGGGAGAGATCA+AGG 0.493655 8:-70573832 MsG0880046208.01.T01:CDS
CCATGTTCGAATCACGGGTG+TGG 0.493749 8:-70572821 MsG0880046208.01.T01:CDS
TCCGATGAGGATCAAGATAG+AGG 0.495969 8:-70572422 MsG0880046208.01.T01:CDS
TGCATTGAGGCTTCTAAACC+AGG 0.497162 8:-70573004 MsG0880046208.01.T01:CDS
CACAGTATCTTCTTGGACAC+CGG 0.497435 8:-70572143 MsG0880046208.01.T01:CDS
CATGTTCGAATCACGGGTGT+GGG 0.498098 8:-70572820 MsG0880046208.01.T01:CDS
TCGACAGACTTGAAGATGTA+AGG 0.499051 8:-70572708 MsG0880046208.01.T01:CDS
ACTTGGGAATTGGTGTAACC+TGG 0.499850 8:+70572986 None:intergenic
ATGCATTCTCATTCAACCTT+AGG 0.503609 8:+70573373 None:intergenic
CGGCTTATGGAAGTTCCCCT+TGG 0.503709 8:+70573150 None:intergenic
GTTCCAAAGTTTAGCTTCAA+GGG 0.504136 8:-70572857 MsG0880046208.01.T01:CDS
GAAGGAACTGAAGTGGAGAC+AGG 0.505317 8:-70573306 MsG0880046208.01.T01:CDS
ATCGAATGAGATGCTGTTGA+GGG 0.506115 8:-70572950 MsG0880046208.01.T01:CDS
CCCGTGATTCGAACATGGCT+TGG 0.506282 8:+70572826 None:intergenic
TTGAAGAGGCTTGCAGAACA+TGG 0.509151 8:-70573777 MsG0880046208.01.T01:CDS
ACCATTTCATTGCAAAATTG+GGG 0.509402 8:-70573185 MsG0880046208.01.T01:CDS
TTCTCCAATTCCCAAAACTC+TGG 0.510256 8:+70572335 None:intergenic
CAACAGCACTTACTTTGGGT+TGG 0.512066 8:-70572183 MsG0880046208.01.T01:CDS
TCCTCTATCTTGATCCTCAT+CGG 0.513315 8:+70572421 None:intergenic
CGCGAAGAACCGTCTTTACG+AGG 0.513686 8:+70573975 None:intergenic
CATCGAATGAGATGCTGTTG+AGG 0.514579 8:-70572951 MsG0880046208.01.T01:CDS
AGTTTGGCACAATTTGGAGC+TGG 0.514639 8:-70573663 MsG0880046208.01.T01:CDS
GGTGCAGAAATCACTTCAGC+AGG 0.516593 8:+70573537 None:intergenic
GCAGCAGCCGTTGAGGCCGG+TGG 0.517483 8:-70573949 MsG0880046208.01.T01:CDS
GCATGGAGGGTTCAGATGCA+TGG 0.518052 8:-70572299 MsG0880046208.01.T01:CDS
CATGATGATGTTGATGTTGG+TGG 0.518083 8:+70573445 None:intergenic
AGGAGAAGAGGACGAAGAAG+AGG 0.523774 8:-70573286 MsG0880046208.01.T01:CDS
TTTGAATTGTTCTGGAGATG+AGG 0.524360 8:-70573577 MsG0880046208.01.T01:CDS
CAGTGTTCACAAGCAGGAGC+AGG 0.525223 8:-70572212 MsG0880046208.01.T01:CDS
CAACATCATCATGTCAATGA+AGG 0.526407 8:-70573435 MsG0880046208.01.T01:CDS
AGGGTGGGAGGAGTTTGAAG+AGG 0.527118 8:-70573791 MsG0880046208.01.T01:CDS
GACTACTGGATGAAAATCAA+AGG 0.528709 8:+70572729 None:intergenic
CAGCAGCCGTTGAGGCCGGT+GGG 0.533021 8:-70573948 MsG0880046208.01.T01:CDS
GTTACAGCAGATTCAAGCCA+AGG 0.534387 8:+70573495 None:intergenic
CTGACTCTCTGATGAACCAT+TGG 0.536463 8:+70573404 None:intergenic
TTCAAAGAGAAAGGAATCGA+AGG 0.539186 8:+70573594 None:intergenic
TCCAAGCCATGTTCGAATCA+CGG 0.544215 8:-70572827 MsG0880046208.01.T01:CDS
ACATCGTTGCTTGCGAAGGA+AGG 0.546146 8:-70572375 MsG0880046208.01.T01:CDS
GTGATTCGAACATGGCTTGG+AGG 0.550236 8:+70572829 None:intergenic
TAATTACAGTGTTCACAAGC+AGG 0.552347 8:-70572218 MsG0880046208.01.T01:CDS
TCACTCCTTAATCTGTGAGT+TGG 0.553015 8:+70574077 None:intergenic
AAAACCAGCAAGTCTGTCTC+CGG 0.554388 8:+70572771 None:intergenic
TTGCTTGCGAAGGAAGGGAC+AGG 0.554464 8:-70572369 MsG0880046208.01.T01:CDS
ATTGTTCTGGAGATGAGGAA+AGG 0.554859 8:-70573572 MsG0880046208.01.T01:CDS
CATGGAGGGTTCAGATGCAT+GGG 0.555361 8:-70572298 MsG0880046208.01.T01:CDS
AGAAAGATGATAGTGGAGCA+TGG 0.555422 8:-70572316 MsG0880046208.01.T01:CDS
GGAACACAATGAGGCGAGGT+TGG 0.556078 8:-70572524 MsG0880046208.01.T01:CDS
GCTTTGGATGCTTCATGTGA+AGG 0.557282 8:-70572686 MsG0880046208.01.T01:CDS
GATAGAGGAGATGTTAGCTA+GGG 0.557387 8:-70572407 MsG0880046208.01.T01:CDS
AAAGGGAAGGTTCAATGCCT+CGG 0.557666 8:+70572747 None:intergenic
ATTGGGAGAGATCAAGGATG+AGG 0.561558 8:-70573826 MsG0880046208.01.T01:CDS
TCAGAACATGAAGAGGGTAA+TGG 0.563710 8:-70573351 MsG0880046208.01.T01:CDS
TCATCGGACTCTCCAGTGGA+AGG 0.563830 8:+70572437 None:intergenic
GCTAAACTTTGGAACAAGCT+AGG 0.565024 8:+70572865 None:intergenic
AAACCATAGACGATGTTGGC+TGG 0.565074 8:-70574125 None:intergenic
CCTTAGCCATCAGAGTCACT+AGG 0.567717 8:-70573104 MsG0880046208.01.T01:CDS
GAATTGGAGAAAGATGATAG+TGG 0.568946 8:-70572323 MsG0880046208.01.T01:CDS
TGACATGATGATGTTGATGT+TGG 0.569622 8:+70573442 None:intergenic
ACTACTGGATGAAAATCAAA+GGG 0.570042 8:+70572730 None:intergenic
CCACACCCGTGATTCGAACA+TGG 0.572154 8:+70572821 None:intergenic
TGAAGTGGAGACAGGAGAAG+AGG 0.572761 8:-70573298 MsG0880046208.01.T01:CDS
GTCTGAGCAGTTGTTGCTAA+AGG 0.573475 8:+70573849 None:intergenic
CCTAGTGACTCTGATGGCTA+AGG 0.575424 8:+70573104 None:intergenic
AGATGATAGTGGAGCATGGA+GGG 0.575789 8:-70572312 MsG0880046208.01.T01:CDS
GGCAATGAATGAATTCAAGC+TGG 0.576427 8:+70572085 None:intergenic
GAAATCCCCACCGGCCTCAA+CGG 0.577034 8:+70573942 None:intergenic
AAGACACTTCATGATGGTAG+TGG 0.578818 8:-70572622 MsG0880046208.01.T01:CDS
TCAGCATGAAGGAACTGAAG+TGG 0.582854 8:-70573313 MsG0880046208.01.T01:CDS
TAGGATTGGTGCTACGAATG+AGG 0.584060 8:+70572575 None:intergenic
AGCAGCCGTTGAGGCCGGTG+GGG 0.586757 8:-70573947 MsG0880046208.01.T01:CDS
ATCCTCATCGGACTCTCCAG+TGG 0.587086 8:+70572433 None:intergenic
TGTAGCTTCCCTCGTAAAGA+CGG 0.588273 8:-70573984 MsG0880046208.01.T01:CDS
ATGCATGGGAGTCACTGATA+GGG 0.590517 8:-70572284 MsG0880046208.01.T01:CDS
AGCCAAGGATTGTTAGACAA+AGG 0.592331 8:+70573510 None:intergenic
AGGAACATCGTTGCTTGCGA+AGG 0.592848 8:-70572379 MsG0880046208.01.T01:CDS
CATCGTTGCTTGCGAAGGAA+GGG 0.593672 8:-70572374 MsG0880046208.01.T01:CDS
CCATTTCATTGCAAAATTGG+GGG 0.595375 8:-70573184 MsG0880046208.01.T01:CDS
TCTTTACGAGGGAAGCTACA+AGG 0.595626 8:+70573987 None:intergenic
TGTTCGAATCACGGGTGTGG+GGG 0.596570 8:-70572818 MsG0880046208.01.T01:CDS
ATGTTCGAATCACGGGTGTG+GGG 0.598829 8:-70572819 MsG0880046208.01.T01:CDS
CCAAAGCCTAGTGACTCTGA+TGG 0.602086 8:+70573098 None:intergenic
GCAAGAAGCGGAACACAATG+AGG 0.609256 8:-70572533 MsG0880046208.01.T01:CDS
CTGGATGAAAATCAAAGGGA+AGG 0.609858 8:+70572734 None:intergenic
CGCGTTCGCAGCAGCCGTTG+AGG 0.611606 8:-70573956 MsG0880046208.01.T01:CDS
GATGTGAAATGAATAAACTT+GGG 0.612838 8:+70572970 None:intergenic
GTGTTGATGCTATTGGGTCA+AGG 0.614329 8:-70573224 MsG0880046208.01.T01:CDS
GGGAATCCTTATCAGCATGA+AGG 0.614596 8:-70573324 MsG0880046208.01.T01:CDS
TCAAAGAGAAAGGAATCGAA+GGG 0.615189 8:+70573595 None:intergenic
TTGCGAAGGAAGGGACAGGT+TGG 0.618359 8:-70572365 MsG0880046208.01.T01:CDS
GAATGCATCAGAACATGAAG+AGG 0.618408 8:-70573358 MsG0880046208.01.T01:CDS
TATTAAACCCTCCAAAACTG+TGG 0.620782 8:+70573625 None:intergenic
AATGAAGGTTCAGTCTCCAA+TGG 0.621452 8:-70573420 MsG0880046208.01.T01:CDS
ACACTTCATGATGGTAGTGG+AGG 0.624635 8:-70572619 MsG0880046208.01.T01:CDS
TGCTATTGGGTCAAGGAATG+TGG 0.631345 8:-70573217 MsG0880046208.01.T01:CDS
CAAGAAGATACTGTGTAGAG+AGG 0.631657 8:+70572151 None:intergenic
ATGAAACTGTCACTGCATTG+AGG 0.631836 8:-70573017 MsG0880046208.01.T01:CDS
AAGGAAGGGACAGGTTGGAG+AGG 0.635039 8:-70572360 MsG0880046208.01.T01:CDS
ATCGACTTCGACATAAAGCA+AGG 0.635920 8:-70572898 MsG0880046208.01.T01:CDS
AAGATGATAGTGGAGCATGG+AGG 0.636506 8:-70572313 MsG0880046208.01.T01:CDS
TTCTCAACTGAAATCCCCAC+CGG 0.637454 8:+70573933 None:intergenic
GCGAAGAACCGTCTTTACGA+GGG 0.645378 8:+70573976 None:intergenic
GTTCACAAGCAGGAGCAGGA+AGG 0.645596 8:-70572208 MsG0880046208.01.T01:CDS
AATGCATCAGAACATGAAGA+GGG 0.650132 8:-70573357 MsG0880046208.01.T01:CDS
TGAGCAGTTGTTGCTAAAGG+TGG 0.661906 8:+70573852 None:intergenic
CTTCACAAGACACTTCATGA+TGG 0.664343 8:-70572628 MsG0880046208.01.T01:CDS
GGATTGTTAGACAAAGGCAA+AGG 0.667360 8:+70573516 None:intergenic
ATGAAGAGGGTAATGGTTCG+GGG 0.669794 8:-70573344 MsG0880046208.01.T01:CDS
TGTTATGGCAGAGCAAGAAG+CGG 0.671377 8:-70572545 MsG0880046208.01.T01:CDS
ACATAAAGCAAGGACTACAA+TGG 0.673543 8:-70572888 MsG0880046208.01.T01:CDS
GGGGATCTTGCATCTCCAAG+GGG 0.674372 8:-70573165 MsG0880046208.01.T01:CDS
AAGCGGAACACAATGAGGCG+AGG 0.682806 8:-70572528 MsG0880046208.01.T01:CDS
TTCCACTGGAGAGTCCGATG+AGG 0.697132 8:-70572435 MsG0880046208.01.T01:CDS
TTTGATTCGATTGATCACAG+TGG 0.727954 8:-70572460 MsG0880046208.01.T01:CDS
GACGAAGAAGAGGAGCATCG+CGG 0.735685 8:-70573276 MsG0880046208.01.T01:CDS
TGTGAAGGAACATGAAACTG+TGG 0.739109 8:-70572671 MsG0880046208.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAATTTTGATGAATTTGAA+AGG - Chr8:70572517-70572536 MsG0880046208.01.T01:CDS 20.0%
!!! GAATTTTGATGAATTTGAAA+GGG - Chr8:70572518-70572537 MsG0880046208.01.T01:CDS 20.0%
! AAATGAATAAACTTGGGAAT+TGG + Chr8:70573239-70573258 None:intergenic 25.0%
! AACCATTTCATTGCAAAATT+GGG - Chr8:70573026-70573045 MsG0880046208.01.T01:CDS 25.0%
! GATGTGAAATGAATAAACTT+GGG + Chr8:70573245-70573264 None:intergenic 25.0%
AAATAGAGCTAAGAGGAAAA+AGG - Chr8:70572479-70572498 MsG0880046208.01.T01:CDS 30.0%
AATACATCTTCAACAGAAAC+TGG + Chr8:70573967-70573986 None:intergenic 30.0%
AATAGAGCTAAGAGGAAAAA+GGG - Chr8:70572480-70572499 MsG0880046208.01.T01:CDS 30.0%
ACCATTTCATTGCAAAATTG+GGG - Chr8:70573027-70573046 MsG0880046208.01.T01:CDS 30.0%
ACTACTGGATGAAAATCAAA+GGG + Chr8:70573485-70573504 None:intergenic 30.0%
CAACCATTTCATTGCAAAAT+TGG - Chr8:70573025-70573044 MsG0880046208.01.T01:CDS 30.0%
CATAACAACAATTGTAGGAT+TGG + Chr8:70573654-70573673 None:intergenic 30.0%
CGATGTGAAATGAATAAACT+TGG + Chr8:70573246-70573265 None:intergenic 30.0%
CGGTAAAATAAGCACAAATT+CGG + Chr8:70573085-70573104 None:intergenic 30.0%
! CAATCCTACAATTGTTGTTA+TGG - Chr8:70573652-70573671 MsG0880046208.01.T01:CDS 30.0%
! GTAACAAAGATCACCAATTT+TGG - Chr8:70572735-70572754 MsG0880046208.01.T01:CDS 30.0%
AATGCATCAGAACATGAAGA+GGG - Chr8:70572855-70572874 MsG0880046208.01.T01:CDS 35.0%
ACATAAAGCAAGGACTACAA+TGG - Chr8:70573324-70573343 MsG0880046208.01.T01:CDS 35.0%
AGTTTCAGTTTGGCACAATT+TGG - Chr8:70572543-70572562 MsG0880046208.01.T01:CDS 35.0%
ATAAGCACAAATTCGGCTTA+TGG + Chr8:70573078-70573097 None:intergenic 35.0%
ATGCATTCTCATTCAACCTT+AGG + Chr8:70572842-70572861 None:intergenic 35.0%
CAACATCATCATGTCAATGA+AGG - Chr8:70572777-70572796 MsG0880046208.01.T01:CDS 35.0%
CCAGAACAATTCAAAGAGAA+AGG + Chr8:70572630-70572649 None:intergenic 35.0%
CCATTTCATTGCAAAATTGG+GGG - Chr8:70573028-70573047 MsG0880046208.01.T01:CDS 35.0%
CCTTTCTCTTTGAATTGTTC+TGG - Chr8:70572627-70572646 MsG0880046208.01.T01:CDS 35.0%
GAATTGGAGAAAGATGATAG+TGG - Chr8:70573889-70573908 MsG0880046208.01.T01:CDS 35.0%
GACTACTGGATGAAAATCAA+AGG + Chr8:70573486-70573505 None:intergenic 35.0%
TAATTACAGTGTTCACAAGC+AGG - Chr8:70573994-70574013 MsG0880046208.01.T01:CDS 35.0%
TATTAAACCCTCCAAAACTG+TGG + Chr8:70572590-70572609 None:intergenic 35.0%
TCAAAGAGAAAGGAATCGAA+GGG + Chr8:70572620-70572639 None:intergenic 35.0%
TCTGCCATAACAACAATTGT+AGG + Chr8:70573659-70573678 None:intergenic 35.0%
TGAAAGGGAAAGTTTCAGTT+TGG - Chr8:70572533-70572552 MsG0880046208.01.T01:CDS 35.0%
TTCAAAGAGAAAGGAATCGA+AGG + Chr8:70572621-70572640 None:intergenic 35.0%
! CTTTTGCAAATAGAGCTAAG+AGG - Chr8:70572472-70572491 MsG0880046208.01.T01:CDS 35.0%
! GTTCCAAAGTTTAGCTTCAA+GGG - Chr8:70573355-70573374 MsG0880046208.01.T01:CDS 35.0%
! TGACATGATGATGTTGATGT+TGG + Chr8:70572773-70572792 None:intergenic 35.0%
! TGTTCCAAAGTTTAGCTTCA+AGG - Chr8:70573354-70573373 MsG0880046208.01.T01:CDS 35.0%
! TTTGATTCGATTGATCACAG+TGG - Chr8:70573752-70573771 MsG0880046208.01.T01:CDS 35.0%
!! AAAGATCACCAATTTTGGTG+AGG - Chr8:70572740-70572759 MsG0880046208.01.T01:CDS 35.0%
!! AAGATCACCAATTTTGGTGA+GGG - Chr8:70572741-70572760 MsG0880046208.01.T01:CDS 35.0%
!! AATTTGGAGCTGGAAACTTT+TGG - Chr8:70572559-70572578 MsG0880046208.01.T01:CDS 35.0%
!! GCACTGATTTGAAAAACATG+AGG + Chr8:70573140-70573159 None:intergenic 35.0%
!! TACTTCTCGTGATTTTGACA+GGG - Chr8:70573160-70573179 MsG0880046208.01.T01:CDS 35.0%
!! TTTGAATTGTTCTGGAGATG+AGG - Chr8:70572635-70572654 MsG0880046208.01.T01:CDS 35.0%
AAGACACTTCATGATGGTAG+TGG - Chr8:70573590-70573609 MsG0880046208.01.T01:CDS 40.0%
AAGCAAGAGCTGAATGAAAC+CGG - Chr8:70573422-70573441 MsG0880046208.01.T01:CDS 40.0%
AATCTCTGTGTGCTCATTGA+TGG + Chr8:70572198-70572217 None:intergenic 40.0%
AATGAAGGTTCAGTCTCCAA+TGG - Chr8:70572792-70572811 MsG0880046208.01.T01:CDS 40.0%
AGATAGAGGAGATGTTAGCT+AGG - Chr8:70573804-70573823 MsG0880046208.01.T01:CDS 40.0%
AGATGTTAGCTAGGGAGATA+AGG - Chr8:70573813-70573832 MsG0880046208.01.T01:CDS 40.0%
AGCCAAGGATTGTTAGACAA+AGG + Chr8:70572705-70572724 None:intergenic 40.0%
ATCAATGAGCACACAGAGAT+TGG - Chr8:70572197-70572216 MsG0880046208.01.T01:CDS 40.0%
ATCGAATGAGATGCTGTTGA+GGG - Chr8:70573262-70573281 MsG0880046208.01.T01:CDS 40.0%
ATGAAACTGTCACTGCATTG+AGG - Chr8:70573195-70573214 MsG0880046208.01.T01:CDS 40.0%
CAAGAAGATACTGTGTAGAG+AGG + Chr8:70574064-70574083 None:intergenic 40.0%
CTCTCTACACAGTATCTTCT+TGG - Chr8:70574062-70574081 MsG0880046208.01.T01:CDS 40.0%
CTGGATGAAAATCAAAGGGA+AGG + Chr8:70573481-70573500 None:intergenic 40.0%
CTTCACAAGACACTTCATGA+TGG - Chr8:70573584-70573603 MsG0880046208.01.T01:CDS 40.0%
GAATGCATCAGAACATGAAG+AGG - Chr8:70572854-70572873 MsG0880046208.01.T01:CDS 40.0%
GACTTGAAGATGTAAGGCTT+TGG - Chr8:70573510-70573529 MsG0880046208.01.T01:CDS 40.0%
GATAGAGGAGATGTTAGCTA+GGG - Chr8:70573805-70573824 MsG0880046208.01.T01:CDS 40.0%
GCTAAGAGGAAAAAGGGTAA+TGG - Chr8:70572486-70572505 MsG0880046208.01.T01:CDS 40.0%
GGATTGTTAGACAAAGGCAA+AGG + Chr8:70572699-70572718 None:intergenic 40.0%
TCACTCCTTAATCTGTGAGT+TGG + Chr8:70572138-70572157 None:intergenic 40.0%
TCAGAACATGAAGAGGGTAA+TGG - Chr8:70572861-70572880 MsG0880046208.01.T01:CDS 40.0%
TCAGTTCCTTCATGCTGATA+AGG + Chr8:70572897-70572916 None:intergenic 40.0%
TCCTCTATCTTGATCCTCAT+CGG + Chr8:70573794-70573813 None:intergenic 40.0%
TCGACAGACTTGAAGATGTA+AGG - Chr8:70573504-70573523 MsG0880046208.01.T01:CDS 40.0%
TGCCTTTGTCTAACAATCCT+TGG - Chr8:70572700-70572719 MsG0880046208.01.T01:CDS 40.0%
TGTCACCAACTCACAGATTA+AGG - Chr8:70572130-70572149 MsG0880046208.01.T01:CDS 40.0%
TGTGAAGGAACATGAAACTG+TGG - Chr8:70573541-70573560 MsG0880046208.01.T01:CDS 40.0%
TTCTCCAATTCCCAAAACTC+TGG + Chr8:70573880-70573899 None:intergenic 40.0%
! AAGAGGAAAAAGGGTAATGG+TGG - Chr8:70572489-70572508 MsG0880046208.01.T01:CDS 40.0%
! ACATGAAGAGGGTAATGGTT+CGG - Chr8:70572866-70572885 MsG0880046208.01.T01:CDS 40.0%
! ACTGGTTGTGTTGATGCTAT+TGG - Chr8:70572981-70573000 MsG0880046208.01.T01:CDS 40.0%
! AGATCAAGGATGAGGAGTTT+TGG - Chr8:70572394-70572413 MsG0880046208.01.T01:CDS 40.0%
! ATCGACTTCGACATAAAGCA+AGG - Chr8:70573314-70573333 MsG0880046208.01.T01:CDS 40.0%
! CATGATGATGTTGATGTTGG+TGG + Chr8:70572770-70572789 None:intergenic 40.0%
! CCCCCAATTTTGCAATGAAA+TGG + Chr8:70573031-70573050 None:intergenic 40.0%
! CTGGTTGTGTTGATGCTATT+GGG - Chr8:70572982-70573001 MsG0880046208.01.T01:CDS 40.0%
! GATCAAGGATGAGGAGTTTT+GGG - Chr8:70572395-70572414 MsG0880046208.01.T01:CDS 40.0%
! TTTTGGTCTGTCCACAGTTT+TGG - Chr8:70572576-70572595 MsG0880046208.01.T01:CDS 40.0%
!! AGAAAGATGATAGTGGAGCA+TGG - Chr8:70573896-70573915 MsG0880046208.01.T01:CDS 40.0%
!! ATTGTTCTGGAGATGAGGAA+AGG - Chr8:70572640-70572659 MsG0880046208.01.T01:CDS 40.0%
!! CTACTTCTCGTGATTTTGAC+AGG - Chr8:70573159-70573178 MsG0880046208.01.T01:CDS 40.0%
!! GCTAAACTTTGGAACAAGCT+AGG + Chr8:70573350-70573369 None:intergenic 40.0%
!! GGCTTTTGAAGGGAAAGAAA+GGG - Chr8:70573283-70573302 MsG0880046208.01.T01:CDS 40.0%
!! TTGTTCTGGAGATGAGGAAA+GGG - Chr8:70572641-70572660 MsG0880046208.01.T01:CDS 40.0%
!!! AGGAGCATTGAGAGACTTTT+TGG - Chr8:70573613-70573632 MsG0880046208.01.T01:CDS 40.0%
!!! GGAGCATTGAGAGACTTTTT+GGG - Chr8:70573614-70573633 MsG0880046208.01.T01:CDS 40.0%
AAAACCAGCAAGTCTGTCTC+CGG + Chr8:70573444-70573463 None:intergenic 45.0%
AAAGGGAAGGTTCAATGCCT+CGG + Chr8:70573468-70573487 None:intergenic 45.0%
ACTTGGGAATTGGTGTAACC+TGG + Chr8:70573229-70573248 None:intergenic 45.0%
AGAGTCAGAGTTTGAGCCTA+AGG - Chr8:70572823-70572842 MsG0880046208.01.T01:CDS 45.0%
AGCAACAACTGCTCAGACAT+TGG - Chr8:70572368-70572387 MsG0880046208.01.T01:CDS 45.0%
AGGAGCAACAGCACTTACTT+TGG - Chr8:70574024-70574043 MsG0880046208.01.T01:CDS 45.0%
ATGCATGGGAGTCACTGATA+GGG - Chr8:70573928-70573947 MsG0880046208.01.T01:CDS 45.0%
ATTGGGAGAGATCAAGGATG+AGG - Chr8:70572386-70572405 MsG0880046208.01.T01:CDS 45.0%
CAACAGCACTTACTTTGGGT+TGG - Chr8:70574029-70574048 MsG0880046208.01.T01:CDS 45.0%
CACAGTATCTTCTTGGACAC+CGG - Chr8:70574069-70574088 MsG0880046208.01.T01:CDS 45.0%
CATCGAATGAGATGCTGTTG+AGG - Chr8:70573261-70573280 MsG0880046208.01.T01:CDS 45.0%
CTGACTCTCTGATGAACCAT+TGG + Chr8:70572811-70572830 None:intergenic 45.0%
GCAACAACTGCTCAGACATT+GGG - Chr8:70572369-70572388 MsG0880046208.01.T01:CDS 45.0%
GCTTGCAGAACATGGATCTT+TGG - Chr8:70572443-70572462 MsG0880046208.01.T01:CDS 45.0%
GGAGCAACAGCACTTACTTT+GGG - Chr8:70574025-70574044 MsG0880046208.01.T01:CDS 45.0%
GGGAATCCTTATCAGCATGA+AGG - Chr8:70572888-70572907 MsG0880046208.01.T01:CDS 45.0%
GTCTGAGCAGTTGTTGCTAA+AGG + Chr8:70572366-70572385 None:intergenic 45.0%
GTTACAGCAGATTCAAGCCA+AGG + Chr8:70572720-70572739 None:intergenic 45.0%
GTTCTCTGCAGCAGAACATT+CGG - Chr8:70572334-70572353 MsG0880046208.01.T01:CDS 45.0%
TCAAGCTGGCTGAGAAAAAG+AGG + Chr8:70574116-70574135 None:intergenic 45.0%
TCAGACATTGGGAGAGATCA+AGG - Chr8:70572380-70572399 MsG0880046208.01.T01:CDS 45.0%
TCAGCATGAAGGAACTGAAG+TGG - Chr8:70572899-70572918 MsG0880046208.01.T01:CDS 45.0%
TCCAAGCCATGTTCGAATCA+CGG - Chr8:70573385-70573404 MsG0880046208.01.T01:CDS 45.0%
TCCGATGAGGATCAAGATAG+AGG - Chr8:70573790-70573809 MsG0880046208.01.T01:CDS 45.0%
TCTTTACGAGGGAAGCTACA+AGG + Chr8:70572228-70572247 None:intergenic 45.0%
TGAGCAGTTGTTGCTAAAGG+TGG + Chr8:70572363-70572382 None:intergenic 45.0%
TGCATTGAGGCTTCTAAACC+AGG - Chr8:70573208-70573227 MsG0880046208.01.T01:CDS 45.0%
TGCTATTGGGTCAAGGAATG+TGG - Chr8:70572995-70573014 MsG0880046208.01.T01:CDS 45.0%
TGGCCCTTGAAGCTAAACTT+TGG + Chr8:70573361-70573380 None:intergenic 45.0%
TGTAGCTTCCCTCGTAAAGA+CGG - Chr8:70572228-70572247 MsG0880046208.01.T01:CDS 45.0%
TGTTATGGCAGAGCAAGAAG+CGG - Chr8:70573667-70573686 MsG0880046208.01.T01:CDS 45.0%
TTCTCAACTGAAATCCCCAC+CGG + Chr8:70572282-70572301 None:intergenic 45.0%
TTGAAGAGGCTTGCAGAACA+TGG - Chr8:70572435-70572454 MsG0880046208.01.T01:CDS 45.0%
! AGTTTGGCACAATTTGGAGC+TGG - Chr8:70572549-70572568 MsG0880046208.01.T01:CDS 45.0%
! ATGAAGAGGGTAATGGTTCG+GGG - Chr8:70572868-70572887 MsG0880046208.01.T01:CDS 45.0%
! ATGCTGTTGAGGGCTTTTGA+AGG - Chr8:70573272-70573291 MsG0880046208.01.T01:CDS 45.0%
! CATGAAGAGGGTAATGGTTC+GGG - Chr8:70572867-70572886 MsG0880046208.01.T01:CDS 45.0%
! GCTTTGGATGCTTCATGTGA+AGG - Chr8:70573526-70573545 MsG0880046208.01.T01:CDS 45.0%
! GTGTTGATGCTATTGGGTCA+AGG - Chr8:70572988-70573007 MsG0880046208.01.T01:CDS 45.0%
! TCTTCAAGTCTGTCGACTAC+TGG + Chr8:70573500-70573519 None:intergenic 45.0%
! TGCTGTTGAGGGCTTTTGAA+GGG - Chr8:70573273-70573292 MsG0880046208.01.T01:CDS 45.0%
!! AAGATGATAGTGGAGCATGG+AGG - Chr8:70573899-70573918 MsG0880046208.01.T01:CDS 45.0%
!! ACACTTCATGATGGTAGTGG+AGG - Chr8:70573593-70573612 MsG0880046208.01.T01:CDS 45.0%
!! AGATGATAGTGGAGCATGGA+GGG - Chr8:70573900-70573919 MsG0880046208.01.T01:CDS 45.0%
!! GAGCTTTTGAGCTTGCTTAC+TGG - Chr8:70572963-70572982 MsG0880046208.01.T01:CDS 45.0%
!! GGGCTTTTGAAGGGAAAGAA+AGG - Chr8:70573282-70573301 MsG0880046208.01.T01:CDS 45.0%
!! TAGGATTGGTGCTACGAATG+AGG + Chr8:70573640-70573659 None:intergenic 45.0%
!! TTCTCGTGATTTTGACAGGG+TGG - Chr8:70573163-70573182 MsG0880046208.01.T01:CDS 45.0%
!!! GATGAGGAGTTTTGGGAGAA+GGG - Chr8:70572402-70572421 MsG0880046208.01.T01:CDS 45.0%
ACATCGTTGCTTGCGAAGGA+AGG - Chr8:70573837-70573856 MsG0880046208.01.T01:CDS 50.0%
AGGAACATCGTTGCTTGCGA+AGG - Chr8:70573833-70573852 MsG0880046208.01.T01:CDS 50.0%
AGGAGAAGAGGACGAAGAAG+AGG - Chr8:70572926-70572945 MsG0880046208.01.T01:CDS 50.0%
ATGTTCGAATCACGGGTGTG+GGG - Chr8:70573393-70573412 MsG0880046208.01.T01:CDS 50.0%
CATCGTTGCTTGCGAAGGAA+GGG - Chr8:70573838-70573857 MsG0880046208.01.T01:CDS 50.0%
CATGGAGGGTTCAGATGCAT+GGG - Chr8:70573914-70573933 MsG0880046208.01.T01:CDS 50.0%
CATGTTCGAATCACGGGTGT+GGG - Chr8:70573392-70573411 MsG0880046208.01.T01:CDS 50.0%
CCAAAGCCTAGTGACTCTGA+TGG + Chr8:70573117-70573136 None:intergenic 50.0%
CCAAGCCATGTTCGAATCAC+GGG - Chr8:70573386-70573405 MsG0880046208.01.T01:CDS 50.0%
CCATCAGAGTCACTAGGCTT+TGG - Chr8:70573114-70573133 MsG0880046208.01.T01:CDS 50.0%
CCTAGTGACTCTGATGGCTA+AGG + Chr8:70573111-70573130 None:intergenic 50.0%
CCTTAGCCATCAGAGTCACT+AGG - Chr8:70573108-70573127 MsG0880046208.01.T01:CDS 50.0%
CTGCTGCTGTTCTTGACTTC+AGG + Chr8:70572306-70572325 None:intergenic 50.0%
GAAGGAACTGAAGTGGAGAC+AGG - Chr8:70572906-70572925 MsG0880046208.01.T01:CDS 50.0%
GACTCTGATGGCTAAGGCTT+CGG + Chr8:70573105-70573124 None:intergenic 50.0%
GATGCATGGGAGTCACTGAT+AGG - Chr8:70573927-70573946 MsG0880046208.01.T01:CDS 50.0%
GCAAGAAGCGGAACACAATG+AGG - Chr8:70573679-70573698 MsG0880046208.01.T01:CDS 50.0%
GCGAAGAACCGTCTTTACGA+GGG + Chr8:70572239-70572258 None:intergenic 50.0%
GGTGCAGAAATCACTTCAGC+AGG + Chr8:70572678-70572697 None:intergenic 50.0%
GTGGCTACCCTCACCAAAAT+TGG + Chr8:70572751-70572770 None:intergenic 50.0%
TGAAGTGGAGACAGGAGAAG+AGG - Chr8:70572914-70572933 MsG0880046208.01.T01:CDS 50.0%
! GTGATTCGAACATGGCTTGG+AGG + Chr8:70573386-70573405 None:intergenic 50.0%
! TCGAACATGGCTTGGAGGAT+TGG + Chr8:70573381-70573400 None:intergenic 50.0%
!! TCGTGATTTTGACAGGGTGG+TGG - Chr8:70573166-70573185 MsG0880046208.01.T01:CDS 50.0%
!! TGGTCTGTCCACAGTTTTGG+AGG - Chr8:70572579-70572598 MsG0880046208.01.T01:CDS 50.0%
!!! AGGAGTTTTGGGAGAAGGGT+GGG - Chr8:70572406-70572425 MsG0880046208.01.T01:CDS 50.0%
!!! GGATGAGGAGTTTTGGGAGA+AGG - Chr8:70572401-70572420 MsG0880046208.01.T01:CDS 50.0%
!!! GGCACCAGAGTTTTGGGAAT+TGG - Chr8:70573873-70573892 MsG0880046208.01.T01:CDS 50.0%
!!! GGTCTGTCCACAGTTTTGGA+GGG - Chr8:70572580-70572599 MsG0880046208.01.T01:CDS 50.0%
!!! TGGAGAGGCACCAGAGTTTT+GGG - Chr8:70573867-70573886 MsG0880046208.01.T01:CDS 50.0%
!!! TTGGAGAGGCACCAGAGTTT+TGG - Chr8:70573866-70573885 MsG0880046208.01.T01:CDS 50.0%
AAGCGGAACACAATGAGGCG+AGG - Chr8:70573684-70573703 MsG0880046208.01.T01:CDS 55.0%
AGGGTGGGAGGAGTTTGAAG+AGG - Chr8:70572421-70572440 MsG0880046208.01.T01:CDS 55.0%
ATCCTCATCGGACTCTCCAG+TGG + Chr8:70573782-70573801 None:intergenic 55.0%
CAGTGTTCACAAGCAGGAGC+AGG - Chr8:70574000-70574019 MsG0880046208.01.T01:CDS 55.0%
CCACACCCGTGATTCGAACA+TGG + Chr8:70573394-70573413 None:intergenic 55.0%
CCATGTTCGAATCACGGGTG+TGG - Chr8:70573391-70573410 MsG0880046208.01.T01:CDS 55.0%
CCCGTGATTCGAACATGGCT+TGG + Chr8:70573389-70573408 None:intergenic 55.0%
CGCGAAGAACCGTCTTTACG+AGG + Chr8:70572240-70572259 None:intergenic 55.0%
CGGCTTATGGAAGTTCCCCT+TGG + Chr8:70573065-70573084 None:intergenic 55.0%
GAAACCGGAGACAGACTTGC+TGG - Chr8:70573437-70573456 MsG0880046208.01.T01:CDS 55.0%
GAGCTTCCAGCAACGTCAAC+CGG + Chr8:70574091-70574110 None:intergenic 55.0%
GCATGGAGGGTTCAGATGCA+TGG - Chr8:70573913-70573932 MsG0880046208.01.T01:CDS 55.0%
GGAACACAATGAGGCGAGGT+TGG - Chr8:70573688-70573707 MsG0880046208.01.T01:CDS 55.0%
GGGGATCTTGCATCTCCAAG+GGG - Chr8:70573047-70573066 MsG0880046208.01.T01:CDS 55.0%
GGGGGATCTTGCATCTCCAA+GGG - Chr8:70573046-70573065 MsG0880046208.01.T01:CDS 55.0%
GTTCACAAGCAGGAGCAGGA+AGG - Chr8:70574004-70574023 MsG0880046208.01.T01:CDS 55.0%
TCATCGGACTCTCCAGTGGA+AGG + Chr8:70573778-70573797 None:intergenic 55.0%
TGATCACAGTGGCCTTCCAC+TGG - Chr8:70573763-70573782 MsG0880046208.01.T01:CDS 55.0%
TGGGGGATCTTGCATCTCCA+AGG - Chr8:70573045-70573064 MsG0880046208.01.T01:CDS 55.0%
TGTTCGAATCACGGGTGTGG+GGG - Chr8:70573394-70573413 MsG0880046208.01.T01:CDS 55.0%
TTCCACTGGAGAGTCCGATG+AGG - Chr8:70573777-70573796 MsG0880046208.01.T01:CDS 55.0%
TTGCGAAGGAAGGGACAGGT+TGG - Chr8:70573847-70573866 MsG0880046208.01.T01:CDS 55.0%
TTGCTTGCGAAGGAAGGGAC+AGG - Chr8:70573843-70573862 MsG0880046208.01.T01:CDS 55.0%
! AAGGAAGGGACAGGTTGGAG+AGG - Chr8:70573852-70573871 MsG0880046208.01.T01:CDS 55.0%
!! GACGAAGAAGAGGAGCATCG+CGG - Chr8:70572936-70572955 MsG0880046208.01.T01:CDS 55.0%
!!! AGTTTTGGGAGAAGGGTGGG+AGG - Chr8:70572409-70572428 MsG0880046208.01.T01:CDS 55.0%
!!! CAGACTTGCTGGTTTTGCCG+AGG - Chr8:70573448-70573467 MsG0880046208.01.T01:CDS 55.0%
!!! GAGGAGTTTTGGGAGAAGGG+TGG - Chr8:70572405-70572424 MsG0880046208.01.T01:CDS 55.0%
GAAATCCCCACCGGCCTCAA+CGG + Chr8:70572273-70572292 None:intergenic 60.0%
! TGGACACCGGTTGACGTTGC+TGG - Chr8:70574082-70574101 MsG0880046208.01.T01:CDS 60.0%
TTCGCAGCAGCCGTTGAGGC+CGG - Chr8:70572260-70572279 MsG0880046208.01.T01:CDS 65.0%
AGCAGCCGTTGAGGCCGGTG+GGG - Chr8:70572265-70572284 MsG0880046208.01.T01:CDS 70.0%
CAGCAGCCGTTGAGGCCGGT+GGG - Chr8:70572264-70572283 MsG0880046208.01.T01:CDS 70.0%
CGCGTTCGCAGCAGCCGTTG+AGG - Chr8:70572256-70572275 MsG0880046208.01.T01:CDS 70.0%
GCAGCAGCCGTTGAGGCCGG+TGG - Chr8:70572263-70572282 MsG0880046208.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 70572099 70574135 70572099 ID=MsG0880046208.01;Name=MsG0880046208.01
Chr8 mRNA 70572099 70574135 70572099 ID=MsG0880046208.01.T01;Parent=MsG0880046208.01;Name=MsG0880046208.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|678
Chr8 exon 70572099 70574135 70572099 ID=MsG0880046208.01.T01:exon:27537;Parent=MsG0880046208.01.T01
Chr8 CDS 70572099 70574135 70572099 ID=MsG0880046208.01.T01:cds;Parent=MsG0880046208.01.T01
Gene Sequence

>MsG0880046208.01.T01

ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGATTAAGGAGTGAAGCATCAGCACAGTTTCAAGCTTGTCATTTTCAGTTACCATCAATGAGCACACAGAGATTGGACTTACCTTGTAGCTTCCCTCGTAAAGACGGTTCTTCGCGTTCGCAGCAGCCGTTGAGGCCGGTGGGGATTTCAGTTGAGAAGCCTGAAGTCAAGAACAGCAGCAGCAGTACTTGTTCTCTGCAGCAGAACATTCGGCTACCACCTTTAGCAACAACTGCTCAGACATTGGGAGAGATCAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGTTTGAAGAGGCTTGCAGAACATGGATCTTTGGATGAGTCTTTTGCAAATAGAGCTAAGAGGAAAAAGGGTAATGGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAAAGTTTCAGTTTGGCACAATTTGGAGCTGGAAACTTTTGGTCTGTCCACAGTTTTGGAGGGTTTAATAGTAATAGCCCTTCGATTCCTTTCTCTTTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGATTTCTGCACCTTTGCCTTTGTCTAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAGGGTAGCCACCAACATCAACATCATCATGTCAATGAAGGTTCAGTCTCCAATGGTTCATCAGAGAGTCAGAGTTTGAGCCTAAGGTTGAATGAGAATGCATCAGAACATGAAGAGGGTAATGGTTCGGGGAATCCTTATCAGCATGAAGGAACTGAAGTGGAGACAGGAGAAGAGGACGAAGAAGAGGAGCATCGCGGTTTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGGTCAAGGAATGTGGCTGCAGTCAACCATTTCATTGCAAAATTGGGGGATCTTGCATCTCCAAGGGGAACTTCCATAAGCCGAATTTGTGCTTATTTTACCGAAGCCTTAGCCATCAGAGTCACTAGGCTTTGGCCTCATGTTTTTCAAATCAGTGCTACTTCTCGTGATTTTGACAGGGTGGTGGATGATGATGAAACTGTCACTGCATTGAGGCTTCTAAACCAGGTTACACCAATTCCCAAGTTTATTCATTTCACATCGAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATCGACTTCGACATAAAGCAAGGACTACAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGGCCAATCCTCCAAGCCATGTTCGAATCACGGGTGTGGGGGAATCGAAGCAAGAGCTGAATGAAACCGGAGACAGACTTGCTGGTTTTGCCGAGGCATTGAACCTTCCCTTTGATTTTCATCCAGTAGTCGACAGACTTGAAGATGTAAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTTCACAAGACACTTCATGATGGTAGTGGAGGAGCATTGAGAGACTTTTTGGGCCTCATTCGTAGCACCAATCCTACAATTGTTGTTATGGCAGAGCAAGAAGCGGAACACAATGAGGCGAGGTTGGACTCAAGAGTCTGCAATTCATTGAAATATTACTCAGCGCTGTTTGATTCGATTGATCACAGTGGCCTTCCACTGGAGAGTCCGATGAGGATCAAGATAGAGGAGATGTTAGCTAGGGAGATAAGGAACATCGTTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTTGGGAATTGGAGAAAGATGATAGTGGAGCATGGAGGGTTCAGATGCATGGGAGTCACTGATAGGGAACTGATTCAGAGCCAGTTTCTGTTGAAGATGTATTCTTGTGATAATTACAGTGTTCACAAGCAGGAGCAGGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTACACAGTATCTTCTTGGACACCGGTTGACGTTGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCTTGA

Protein sequence

>MsG0880046208.01.T01

MLAGCSSSTLLSPTHRLRSEASAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQPLRPVGISVEKPEVKNSSSSTCSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRSLKRLAEHGSLDESFANRAKRKKGNGGDENFDEFERESFSLAQFGAGNFWSVHSFGGFNSNSPSIPFSLNCSGDEERVCFAPAEVISAPLPLSNNPWLESAVTKITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRLNENASEHEEGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAVNHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFQISATSRDFDRVVDDDETVTALRLLNQVTPIPKFIHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFDFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIVVMAEQEAEHNEARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMLAREIRNIVACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDRELIQSQFLLKMYSCDNYSVHKQEQEGATALTLGWLDQPLYTVSSWTPVDVAGSSSSFSQPA*