AlfalfaGEDB | MsG0480018106.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018106.01

KEGG: -
GO: -
PFAM: PF07891

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018106.01.T01	XP_013454490.1	97.647	425	10	0	1	425	1	425	0	855
MsG0480018106.01.T02	XP_013454490.1	97.647	425	10	0	1	425	1	425	0	855

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018106.01.T01	A0A072UGG4	97.647	425	10	0	1	425	1	425	0.0	855
MsG0480018106.01.T02	A0A072UGG4	97.647	425	10	0	1	425	1	425	0.0	855

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048258.01	MsG0480018106.01	0.828799	7.354446e-55	7.386733e-52
MsG0080048781.01	MsG0480018106.01	0.813097	3.040773e-51	1.967268e-48
MsG0180000111.01	MsG0480018106.01	0.810067	1.386140e-50	8.274600e-48
MsG0180001588.01	MsG0480018106.01	0.808436	3.100467e-50	1.772749e-47
MsG0180002218.01	MsG0480018106.01	0.818332	2.072013e-52	1.546467e-49
MsG0180002583.01	MsG0480018106.01	0.831026	2.108150e-55	2.259853e-52
MsG0180003485.01	MsG0480018106.01	0.824371	8.371090e-54	7.400194e-51
MsG0180004120.01	MsG0480018106.01	0.823365	1.440539e-53	1.237675e-50
MsG0180004471.01	MsG0480018106.01	0.835730	1.415196e-56	1.745844e-53
MsG0180004538.01	MsG0480018106.01	0.832405	9.633939e-56	1.075763e-52
MsG0180004583.01	MsG0480018106.01	0.809803	1.579453e-50	9.364017e-48
MsG0180004661.01	MsG0480018106.01	0.817163	3.801689e-52	2.747855e-49
MsG0180004972.01	MsG0480018106.01	0.802746	4.846430e-49	2.392777e-46
MsG0180004994.01	MsG0480018106.01	0.820534	6.519580e-53	5.172275e-50
MsG0180004995.01	MsG0480018106.01	0.833064	6.610364e-56	7.528442e-53
MsG0180005002.01	MsG0480018106.01	0.821601	3.702210e-53	3.025597e-50
MsG0180005048.01	MsG0480018106.01	0.852891	3.428154e-61	7.271141e-58
MsG0180006062.01	MsG0480018106.01	0.843679	1.208266e-58	1.904883e-55
MsG0180006133.01	MsG0480018106.01	0.873038	2.003730e-67	8.569773e-64
MsG0380014666.01	MsG0480018106.01	0.831715	1.426499e-55	1.560973e-52
MsG0380015189.01	MsG0480018106.01	0.849765	2.620509e-60	5.021009e-57
MsG0380015340.01	MsG0480018106.01	0.813800	2.130756e-51	1.405200e-48
MsG0380015825.01	MsG0480018106.01	0.845802	3.234566e-59	5.454820e-56
MsG0380016027.01	MsG0480018106.01	0.814016	1.909319e-51	1.266575e-48
MsG0380016225.01	MsG0480018106.01	0.859441	4.126524e-63	1.090001e-59
MsG0380017150.01	MsG0480018106.01	0.814440	1.539103e-51	1.032803e-48
MsG0380017164.01	MsG0480018106.01	0.805308	1.421224e-49	7.493850e-47
MsG0380017181.01	MsG0480018106.01	0.855675	5.380037e-62	1.251980e-58
MsG0380017282.01	MsG0480018106.01	0.860205	2.429809e-63	6.589427e-60
MsG0380017332.01	MsG0480018106.01	0.802565	5.281863e-49	2.595619e-46
MsG0380017440.01	MsG0480018106.01	0.811435	7.012479e-51	4.340504e-48
MsG0380017761.01	MsG0480018106.01	0.819580	1.077854e-52	8.327610e-50
MsG0480018106.01	MsG0480018397.01	0.801772	7.689914e-49	3.703499e-46
MsG0480018106.01	MsG0480018526.01	0.808645	2.796820e-50	1.607761e-47
MsG0480018106.01	MsG0480018785.01	0.817459	3.262093e-52	2.377122e-49
MsG0480018106.01	MsG0480020366.01	0.827714	1.342980e-54	1.306974e-51
MsG0480018106.01	MsG0480021301.01	0.804811	1.805591e-49	9.400465e-47
MsG0480018106.01	MsG0480021456.01	0.829276	5.634356e-55	5.740373e-52
MsG0480018106.01	MsG0480021902.01	0.823518	1.326898e-53	1.145098e-50
MsG0480018106.01	MsG0480022307.01	0.809522	1.815386e-50	1.068235e-47
MsG0480018106.01	MsG0480022320.01	0.803213	3.880338e-49	1.938710e-46
MsG0480018106.01	MsG0480022784.01	0.829728	4.376954e-55	4.518173e-52
MsG0480018106.01	MsG0480022998.01	0.819207	1.311109e-52	1.002467e-49
MsG0480018106.01	MsG0480023003.01	0.815020	1.145178e-51	7.805595e-49
MsG0480018106.01	MsG0480023424.01	0.827377	1.618384e-54	1.559851e-51
MsG0480018106.01	MsG0480023426.01	0.821609	3.685789e-53	3.012935e-50
MsG0480018106.01	MsG0480023532.01	0.801179	1.017295e-48	4.826653e-46
MsG0480018106.01	MsG0480023626.01	0.804438	2.160060e-49	1.113706e-46
MsG0480018106.01	MsG0480023653.01	0.815952	7.099802e-52	4.964367e-49
MsG0480018106.01	MsG0480023706.01	0.827380	1.615682e-54	1.557370e-51
MsG0480018106.01	MsG0580024158.01	0.827341	1.650580e-54	1.589183e-51
MsG0480018106.01	MsG0580024276.01	0.820639	6.167548e-53	4.906861e-50
MsG0480018106.01	MsG0580024388.01	0.812254	4.651272e-51	2.942847e-48
MsG0480018106.01	MsG0580024787.01	0.807645	4.568535e-50	2.558255e-47
MsG0480018106.01	MsG0580024835.01	0.809574	1.769301e-50	1.042601e-47
MsG0480018106.01	MsG0580024954.01	0.861525	9.648481e-64	2.738474e-60
MsG0480018106.01	MsG0580025177.01	0.822212	2.672760e-53	2.222676e-50
MsG0480018106.01	MsG0580025186.01	0.823332	1.466658e-53	1.258993e-50
MsG0480018106.01	MsG0580025203.01	0.873102	1.907135e-67	8.175777e-64
MsG0480018106.01	MsG0580025504.01	0.839337	1.683434e-57	2.317642e-54
MsG0480018106.01	MsG0580025506.01	0.866311	3.128662e-65	1.049791e-61
MsG0480018106.01	MsG0580028756.01	0.804143	2.488463e-49	1.273377e-46
MsG0480018106.01	MsG0580028955.01	0.805084	1.583088e-49	8.299644e-47
MsG0480018106.01	MsG0580029591.01	0.830244	3.276322e-55	3.432650e-52
MsG0480018106.01	MsG0680035776.01	0.819035	1.434426e-52	1.091649e-49
MsG0480018106.01	MsG0680035792.01	0.872807	2.394965e-67	1.015672e-63
MsG0480018106.01	MsG0780035954.01	0.808755	2.649391e-50	1.527448e-47
MsG0480018106.01	MsG0780038736.01	0.828012	1.138784e-54	1.118019e-51
MsG0480018106.01	MsG0780039303.01	0.846268	2.415817e-59	4.135177e-56
MsG0480018106.01	MsG0780039578.01	0.811422	7.056297e-51	4.366140e-48
MsG0480018106.01	MsG0780039861.01	0.814416	1.557788e-51	1.044694e-48
MsG0480018106.01	MsG0780040364.01	0.801626	8.238570e-49	3.953016e-46
MsG0480018106.01	MsG0780040620.01	0.850869	1.284383e-60	2.551642e-57
MsG0480018106.01	MsG0780040641.01	0.848965	4.379160e-60	8.175583e-57
MsG0480018106.01	MsG0780040799.01	0.816659	4.935447e-52	3.518434e-49
MsG0480018106.01	MsG0780041008.01	0.824852	6.447984e-54	5.780282e-51
MsG0480018106.01	MsG0780041273.01	0.822260	2.605674e-53	2.169929e-50
MsG0480018106.01	MsG0780041359.01	0.825479	4.582989e-54	4.182070e-51
MsG0480018106.01	MsG0780041546.01	0.804608	1.991195e-49	1.031153e-46
MsG0480018106.01	MsG0780041660.01	0.827514	1.500540e-54	1.451754e-51
MsG0480018106.01	MsG0780041775.01	0.805095	1.574711e-49	8.258004e-47
MsG0480018106.01	MsG0880043637.01	0.824018	1.013094e-53	8.866450e-51
MsG0480018106.01	MsG0880045015.01	0.826217	3.062794e-54	2.854330e-51
MsG0480018106.01	MsG0880045612.01	0.811395	7.151872e-51	4.422154e-48
MsG0480018106.01	MsG0880045679.01	0.814873	1.234103e-51	8.378038e-49
MsG0480018106.01	MsG0880045775.01	0.811767	5.937584e-51	3.707435e-48
MsG0480018106.01	MsG0880045890.01	0.815803	7.667845e-52	5.339847e-49
MsG0480018106.01	MsG0880045989.01	0.807884	4.065044e-50	2.290507e-47
MsG0480018106.01	MsG0880046529.01	0.856456	3.178042e-62	7.590548e-59
MsG0480018106.01	MsG0880046904.01	0.800425	1.449716e-48	6.748420e-46
MsG0480018106.01	MsG0880046905.01	0.843736	1.166279e-58	1.841935e-55
MsG0480018106.01	MsG0880046993.01	0.836072	1.159511e-56	1.445267e-53
MsG0480018106.01	MsG0880047059.01	0.802042	6.769678e-49	3.282760e-46
MsG0480018106.01	MsG0880047649.01	0.826650	2.414969e-54	2.278479e-51
MsG0280007092.01	MsG0480018106.01	0.825529	4.459925e-54	4.075658e-51
MsG0280009866.01	MsG0480018106.01	0.812954	3.269573e-51	2.107170e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018106.01.T01	MTR_4g005350	97.647	425	10	0	1	425	1	425	0.0	855
MsG0480018106.01.T01	MTR_8g104270	39.571	326	163	13	115	424	254	561	3.47e-47	170
MsG0480018106.01.T01	MTR_6g084440	40.379	317	166	10	115	424	300	600	1.43e-46	169
MsG0480018106.01.T01	MTR_6g084440	40.439	319	165	11	115	424	300	602	9.00e-46	167
MsG0480018106.01.T01	MTR_7g010160	34.535	333	178	12	122	424	422	744	5.04e-39	149
MsG0480018106.01.T01	MTR_5g040600	31.231	333	181	11	121	425	597	909	3.13e-29	121
MsG0480018106.01.T01	MTR_8g467380	31.667	240	140	6	194	410	587	825	6.60e-20	92.8
MsG0480018106.01.T01	MTR_8g467390	42.045	88	43	2	194	277	206	289	1.62e-14	75.1
MsG0480018106.01.T02	MTR_4g005350	97.647	425	10	0	1	425	1	425	0.0	855
MsG0480018106.01.T02	MTR_8g104270	39.571	326	163	13	115	424	254	561	3.47e-47	170
MsG0480018106.01.T02	MTR_6g084440	40.379	317	166	10	115	424	300	600	1.43e-46	169
MsG0480018106.01.T02	MTR_6g084440	40.439	319	165	11	115	424	300	602	9.00e-46	167
MsG0480018106.01.T02	MTR_7g010160	34.535	333	178	12	122	424	422	744	5.04e-39	149
MsG0480018106.01.T02	MTR_5g040600	31.231	333	181	11	121	425	597	909	3.13e-29	121
MsG0480018106.01.T02	MTR_8g467380	31.667	240	140	6	194	410	587	825	6.60e-20	92.8
MsG0480018106.01.T02	MTR_8g467390	42.045	88	43	2	194	277	206	289	1.62e-14	75.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018106.01.T01	AT3G20260	59.729	442	156	10	1	425	1	437	2.08e-156	449
MsG0480018106.01.T01	AT1G73850	36.446	332	179	10	115	424	312	633	1.92e-46	169
MsG0480018106.01.T01	AT1G73850	36.446	332	179	10	115	424	312	633	1.92e-46	169
MsG0480018106.01.T01	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T01	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T01	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T01	AT5G39785	29.762	336	197	6	125	425	276	607	2.20e-35	138
MsG0480018106.01.T01	AT5G39785	29.412	357	195	8	125	425	276	631	1.21e-33	133
MsG0480018106.01.T01	AT1G69610	28.571	399	224	10	60	425	222	592	1.01e-30	124
MsG0480018106.01.T01	AT1G69610	28.535	396	228	10	60	425	266	636	1.02e-30	125
MsG0480018106.01.T01	AT1G69610	28.535	396	228	10	60	425	267	637	1.08e-30	125
MsG0480018106.01.T01	AT3G01175	27.536	345	182	11	119	424	260	575	1.76e-19	91.3
MsG0480018106.01.T02	AT3G20260	59.729	442	156	10	1	425	1	437	2.08e-156	449
MsG0480018106.01.T02	AT1G73850	36.446	332	179	10	115	424	312	633	1.92e-46	169
MsG0480018106.01.T02	AT1G73850	36.446	332	179	10	115	424	312	633	1.92e-46	169
MsG0480018106.01.T02	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T02	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T02	AT5G39785	31.024	332	197	5	125	425	276	606	5.19e-37	142
MsG0480018106.01.T02	AT5G39785	29.762	336	197	6	125	425	276	607	2.20e-35	138
MsG0480018106.01.T02	AT5G39785	29.412	357	195	8	125	425	276	631	1.21e-33	133
MsG0480018106.01.T02	AT1G69610	28.571	399	224	10	60	425	222	592	1.01e-30	124
MsG0480018106.01.T02	AT1G69610	28.535	396	228	10	60	425	266	636	1.02e-30	125
MsG0480018106.01.T02	AT1G69610	28.535	396	228	10	60	425	267	637	1.08e-30	125
MsG0480018106.01.T02	AT3G01175	27.536	345	182	11	119	424	260	575	1.76e-19	91.3

Find 52 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGCAGCATCTTAGTGAAAT+TGG	0.249862	4:-288303	MsG0480018106.01.T01:CDS
CAAAGCCTCGCCACCATTGC+TGG	0.272542	4:+288379	None:intergenic
GTAGTATTGGGCTGTGGCTT+AGG	0.278993	4:-288767	MsG0480018106.01.T01:five_prime_UTR
AATCTAAGCTAAGCTAAGTT+AGG	0.286315	4:-289720	MsG0480018106.01.T01:five_prime_UTR
TAACTTAGCTTAGCTTAGAT+TGG	0.325718	4:+289722	None:intergenic
TCGAGACATGAATCTTCTTC+AGG	0.336685	4:+288471	None:intergenic
TCCACATCCCTCCATTCATT+TGG	0.357529	4:+288411	None:intergenic
GGCTTTGATTCCTCAGGCTC+AGG	0.371626	4:+288633	None:intergenic
GAGCCTCCTCTTTACCTCAT+TGG	0.400140	4:+288530	None:intergenic
GAAGAGGAAGAGGGAGAGAC+AGG	0.409837	4:-288435	MsG0480018106.01.T01:CDS
ATAATCTTCTCTCTTATTCA+AGG	0.416061	4:-289654	MsG0480018106.01.T01:intron
AAACTCTTTGTTGGTTGGGT+TGG	0.420305	4:-288893	MsG0480018106.01.T01:intron
TAGTATTGGGCTGTGGCTTA+GGG	0.421544	4:-288766	MsG0480018106.01.T01:five_prime_UTR
GATAATACAGTATGAGGAAA+AGG	0.436537	4:+289689	None:intergenic
AGGGGAGGATGAAGAGGAAG+AGG	0.437173	4:-288445	MsG0480018106.01.T01:CDS
GATGAAGATAATACAGTATG+AGG	0.442165	4:+289683	None:intergenic
GTGTTGGGCTTTGATTCCTC+AGG	0.443162	4:+288627	None:intergenic
ACTGTCTATTAGTATTACTT+TGG	0.454341	4:-288861	MsG0480018106.01.T01:intron
AAAGGTGAGGTGGTAAAGCA+TGG	0.463682	4:-288730	MsG0480018106.01.T01:exon
TACTGTATTATCTTCATCAA+TGG	0.469957	4:-289678	MsG0480018106.01.T01:five_prime_UTR
CATCTTAGTGAAATTGGAAA+AGG	0.480151	4:-288297	MsG0480018106.01.T01:intron
ATCTAAGCTAAGCTAAGTTA+GGG	0.488915	4:-289719	MsG0480018106.01.T01:five_prime_UTR
GGGGAGGATGAAGAGGAAGA+GGG	0.491674	4:-288444	MsG0480018106.01.T01:CDS
TTATTACCAATGAGGTAAAG+AGG	0.499834	4:-288536	MsG0480018106.01.T01:CDS
TGATCAGGACCACCAGTGTT+GGG	0.502702	4:+288612	None:intergenic
GAGAGACAGGACCAAATGAA+TGG	0.508991	4:-288422	MsG0480018106.01.T01:CDS
GCTTAGCTTAGATTGGAGCT+TGG	0.527021	4:+289729	None:intergenic
GAAGATTCATGTCTCGAGGA+AGG	0.531829	4:-288465	MsG0480018106.01.T01:CDS
AGGCAGAAGGCCAGCAATGG+TGG	0.534428	4:-288389	MsG0480018106.01.T01:CDS
CGAGGAAGGGGAGGATGAAG+AGG	0.537283	4:-288451	MsG0480018106.01.T01:CDS
AGATTCATGTCTCGAGGAAG+GGG	0.539571	4:-288463	MsG0480018106.01.T01:CDS
TTTAGGAAATCTCAGAAAGC+AGG	0.542506	4:-288687	MsG0480018106.01.T01:CDS
GACAGGACCAAATGAATGGA+GGG	0.543843	4:-288418	MsG0480018106.01.T01:CDS
CTGATCAGGACCACCAGTGT+TGG	0.545402	4:+288611	None:intergenic
AAAGAATGTTATTCTTTGAT+CGG	0.546997	4:-288332	MsG0480018106.01.T01:CDS
AAGATTCATGTCTCGAGGAA+GGG	0.547261	4:-288464	MsG0480018106.01.T01:CDS
TTGGAGAGTGAAGTGAAGTG+AGG	0.556883	4:+289748	None:intergenic
ACCAAATGAATGGAGGGATG+TGG	0.560503	4:-288412	MsG0480018106.01.T01:CDS
TGGAGGGATGTGGAGGCAGA+AGG	0.569588	4:-288402	MsG0480018106.01.T01:CDS
GAAGGCCAGCAATGGTGGCG+AGG	0.595275	4:-288384	MsG0480018106.01.T01:CDS
GAAATCTCAGAAAGCAGGTG+TGG	0.595844	4:-288682	MsG0480018106.01.T01:CDS
CGATTCTTGTGCTGATGCTG+AGG	0.602958	4:-288571	MsG0480018106.01.T01:CDS
CAAGGCAGTGCCTGAGCCTG+AGG	0.607834	4:-288643	MsG0480018106.01.T01:CDS
TGAGGTAAAGAGGAGGCTCA+AGG	0.611185	4:-288526	MsG0480018106.01.T01:CDS
TGGAGGCAGAAGGCCAGCAA+TGG	0.611341	4:-288392	MsG0480018106.01.T01:CDS
GAGGAATCAAAGCCCAACAC+TGG	0.613144	4:-288624	MsG0480018106.01.T01:CDS
AAATGAATGGAGGGATGTGG+AGG	0.617932	4:-288409	MsG0480018106.01.T01:CDS
AGACAGGACCAAATGAATGG+AGG	0.620870	4:-288419	MsG0480018106.01.T01:CDS
TTCATGTCTCGAGGAAGGGG+AGG	0.621507	4:-288460	MsG0480018106.01.T01:CDS
GAATCAAAGCCCAACACTGG+TGG	0.626423	4:-288621	MsG0480018106.01.T01:CDS
TGAAGAAGATTCATGTCTCG+AGG	0.629329	4:-288469	MsG0480018106.01.T01:CDS
TTACCAATGAGGTAAAGAGG+AGG	0.699801	4:-288533	MsG0480018106.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTAGTATAAAAGAAATAT+TGG	-	Chr4:288387-288406	MsG0480018106.01.T01:CDS	10.0%
!!	TTTATCAAATGTATTATATT+TGG	-	Chr4:287771-287790	MsG0480018106.01.T01:intron	10.0%
!!!	TTTTGAAGATTAAAAAATTT+AGG	-	Chr4:286979-286998	MsG0480018106.01.T01:intron	10.0%
!!	ATAATATAAAATTCCAAAGT+TGG	+	Chr4:288720-288739	None:intergenic	15.0%
!!	TCAATTTATTAATAACTTTG+AGG	-	Chr4:287637-287656	MsG0480018106.01.T01:CDS	15.0%
!!!	ATCTAATTTTTTTGTAGTAT+TGG	-	Chr4:286903-286922	MsG0480018106.01.T01:intron	15.0%
!!!	TCTAATTTTTTTGTAGTATT+GGG	-	Chr4:286904-286923	MsG0480018106.01.T01:intron	15.0%
!!	AAAGAATGTTATTCTTTGAT+CGG	-	Chr4:287351-287370	MsG0480018106.01.T01:intron	20.0%
!!	AAATTAAAGAAACATGTTTG+TGG	-	Chr4:289710-289729	MsG0480018106.01.T01:five_prime_UTR	20.0%
!!	AACAATAGAAAAGTAAATTC+TGG	+	Chr4:289119-289138	None:intergenic	20.0%
!!	AACTTGATTTATCGAATAAT+AGG	-	Chr4:289424-289443	MsG0480018106.01.T01:intron	20.0%
!!	AATTAAAATCAGGATTATGT+TGG	+	Chr4:287693-287712	None:intergenic	20.0%
!!	ACACTTAAAAGATCTAAATA+TGG	+	Chr4:287492-287511	None:intergenic	20.0%
!!	ACATACATAGTTTCTATTAT+GGG	+	Chr4:286625-286644	None:intergenic	20.0%
!!	ACTTAAAAGATCTAAATATG+GGG	+	Chr4:287490-287509	None:intergenic	20.0%
!!	AGCAAATATATGTTAACTAT+TGG	-	Chr4:288924-288943	MsG0480018106.01.T01:intron	20.0%
!!	ATATGAGTTATAAGATATCT+TGG	-	Chr4:288130-288149	MsG0480018106.01.T01:intron	20.0%
!!	ATTATGAGATTTGATAAATG+TGG	+	Chr4:287877-287896	None:intergenic	20.0%
!!	ATTCCAAAAAGAAAAGATAA+TGG	+	Chr4:286259-286278	None:intergenic	20.0%
!!	CACTTAAAAGATCTAAATAT+GGG	+	Chr4:287491-287510	None:intergenic	20.0%
!!	CTTTATGTTATGAATGTTTA+GGG	-	Chr4:289501-289520	MsG0480018106.01.T01:intron	20.0%
!!	TAATAAATTGAAATGAATCC+AGG	+	Chr4:287628-287647	None:intergenic	20.0%
!!	TCTATTGTTAAAGATGAAAT+TGG	-	Chr4:289130-289149	MsG0480018106.01.T01:intron	20.0%
!!	TCTTTATGTTATGAATGTTT+AGG	-	Chr4:289500-289519	MsG0480018106.01.T01:intron	20.0%
!!	TGATCTATATCAATTTGAAA+GGG	-	Chr4:286380-286399	MsG0480018106.01.T01:CDS	20.0%
!!!	CAAGTTTTTTTTTTTGTTTC+AGG	-	Chr4:286322-286341	MsG0480018106.01.T01:CDS	20.0%
!!!	CTGATTTTAATTGAAGTTAA+GGG	-	Chr4:287701-287720	MsG0480018106.01.T01:CDS	20.0%
!!!	CTTTTATACTAAATAACTTC+AGG	+	Chr4:288381-288400	None:intergenic	20.0%
!!!	TGCTATATGATTAACTTTTA+AGG	-	Chr4:288834-288853	MsG0480018106.01.T01:intron	20.0%
!!!	TTATTAATAACTTTGAGGAT+AGG	-	Chr4:287642-287661	MsG0480018106.01.T01:CDS	20.0%
!!!	TTCTTTAATTTTCCAAACAT+AGG	+	Chr4:289701-289720	None:intergenic	20.0%
!	AAAATGAAAATGGGAAAGAA+AGG	+	Chr4:286069-286088	None:intergenic	25.0%
!	AAATTATCTAAACCCATATG+TGG	-	Chr4:288338-288357	MsG0480018106.01.T01:CDS	25.0%
!	ACTGACATTATATTCAGATT+AGG	+	Chr4:287752-287771	None:intergenic	25.0%
!	ACTGTCTATTAGTATTACTT+TGG	-	Chr4:286822-286841	MsG0480018106.01.T01:intron	25.0%
!	ATAATCTTCTCTCTTATTCA+AGG	-	Chr4:286029-286048	MsG0480018106.01.T01:three_prime_UTR	25.0%
!	CATATTAAAGAAGAACCATT+TGG	+	Chr4:288866-288885	None:intergenic	25.0%
!	CCTTAACTTCAATTAAAATC+AGG	+	Chr4:287703-287722	None:intergenic	25.0%
!	CTTTCCTTGAAAAAATTTGA+AGG	-	Chr4:287988-288007	MsG0480018106.01.T01:intron	25.0%
!	GACATACATAGTTTCTATTA+TGG	+	Chr4:286626-286645	None:intergenic	25.0%
!	GTGATCTATATCAATTTGAA+AGG	-	Chr4:286379-286398	MsG0480018106.01.T01:CDS	25.0%
!	TAAGTGTTTAAGCTAATGAA+TGG	-	Chr4:288464-288483	MsG0480018106.01.T01:CDS	25.0%
!	TACTGTATTATCTTCATCAA+TGG	-	Chr4:286005-286024	MsG0480018106.01.T01:three_prime_UTR	25.0%
!	TGCATAAAACTTTAGATCAT+GGG	+	Chr4:289070-289089	None:intergenic	25.0%
!	TGTAATATTTGTGAGTTTCT+AGG	-	Chr4:289598-289617	MsG0480018106.01.T01:intron	25.0%
!	TTTCATTTAAATGCAGAAAG+TGG	-	Chr4:289230-289249	MsG0480018106.01.T01:intron	25.0%
!!	AGTCCATTATCTTTTCTTTT+TGG	-	Chr4:286253-286272	MsG0480018106.01.T01:CDS	25.0%
!!	ATTGAGAAGAAACAGTTTTA+TGG	-	Chr4:287181-287200	MsG0480018106.01.T01:CDS	25.0%
!!	GTGAATCAATTTAAAGCAAA+AGG	+	Chr4:286109-286128	None:intergenic	25.0%
!!	TAACTATTGGTTATACTTTG+AGG	-	Chr4:288937-288956	MsG0480018106.01.T01:intron	25.0%
!!	TGAATCTACTTTCTTTTAAG+AGG	-	Chr4:286278-286297	MsG0480018106.01.T01:CDS	25.0%
!!!	AAACAACCTTTTAACTTGAA+AGG	+	Chr4:286724-286743	None:intergenic	25.0%
!!!	CCTGATTTTAATTGAAGTTA+AGG	-	Chr4:287700-287719	MsG0480018106.01.T01:CDS	25.0%
!!!	TAGGGTAGTTTGTTTTTTAA+AGG	-	Chr4:286935-286954	MsG0480018106.01.T01:intron	25.0%
!!!	TAGTTTGTTTTTTAAAGGTG+AGG	-	Chr4:286940-286959	MsG0480018106.01.T01:intron	25.0%
!!!	TGTTTTGACGAAATAGAATT+AGG	-	Chr4:289020-289039	MsG0480018106.01.T01:intron	25.0%
	AATCTAAGCTAAGCTAAGTT+AGG	-	Chr4:285963-285982	MsG0480018106.01.T01:three_prime_UTR	30.0%
	ATCGAATAATAGGTTAGAGA+GGG	-	Chr4:289434-289453	MsG0480018106.01.T01:intron	30.0%
	ATCTAAGCTAAGCTAAGTTA+GGG	-	Chr4:285964-285983	MsG0480018106.01.T01:three_prime_UTR	30.0%
	ATGTTATGAATGTTTAGGGA+AGG	-	Chr4:289505-289524	MsG0480018106.01.T01:intron	30.0%
	CATCTTAGTGAAATTGGAAA+AGG	-	Chr4:287386-287405	MsG0480018106.01.T01:CDS	30.0%
	CTTTAATATGCTTGTTCCAA+TGG	-	Chr4:288876-288895	MsG0480018106.01.T01:intron	30.0%
	CTTTCGTTTATTCCTGAAAA+GGG	-	Chr4:288578-288597	MsG0480018106.01.T01:CDS	30.0%
	GAAAATTCACCTCGTATATT+TGG	+	Chr4:288315-288334	None:intergenic	30.0%
	GATAATACAGTATGAGGAAA+AGG	+	Chr4:285997-286016	None:intergenic	30.0%
	GATGAAGATAATACAGTATG+AGG	+	Chr4:286003-286022	None:intergenic	30.0%
	GATTATGTATGAGTATGACA+GGG	-	Chr4:289534-289553	MsG0480018106.01.T01:intron	30.0%
	GTGCATAAAACTTTAGATCA+TGG	+	Chr4:289071-289090	None:intergenic	30.0%
	GTTAAGCAAAAACTCTTTGT+TGG	-	Chr4:286781-286800	MsG0480018106.01.T01:intron	30.0%
	GTTGGATACACATTTGAAAA+GGG	-	Chr4:289809-289828	MsG0480018106.01.T01:five_prime_UTR	30.0%
	TAACTTAGCTTAGCTTAGAT+TGG	+	Chr4:285964-285983	None:intergenic	30.0%
	TAGTGTAACGAAGATCATTA+TGG	-	Chr4:289641-289660	MsG0480018106.01.T01:intron	30.0%
	TATCGAATAATAGGTTAGAG+AGG	-	Chr4:289433-289452	MsG0480018106.01.T01:intron	30.0%
	TCAATTATCCTGATAAGATC+TGG	+	Chr4:288543-288562	None:intergenic	30.0%
	TCATCACTAATGTCTTGTAA+TGG	-	Chr4:286672-286691	MsG0480018106.01.T01:intron	30.0%
	TGATGATTAGTGTGATCTAA+TGG	+	Chr4:286658-286677	None:intergenic	30.0%
	TGTTGGATACACATTTGAAA+AGG	-	Chr4:289808-289827	MsG0480018106.01.T01:five_prime_UTR	30.0%
	TTATTACCAATGAGGTAAAG+AGG	-	Chr4:287147-287166	MsG0480018106.01.T01:CDS	30.0%
	TTTCCATGAGGGTTATTATT+AGG	-	Chr4:286408-286427	MsG0480018106.01.T01:CDS	30.0%
!	AATGGAAGCTGCATTATTTT+TGG	-	Chr4:286690-286709	MsG0480018106.01.T01:intron	30.0%
!	ATAAGATTTTCGCGTCAATA+AGG	+	Chr4:289338-289357	None:intergenic	30.0%
!	CGATGATTTTATTACCAATG+AGG	-	Chr4:287139-287158	MsG0480018106.01.T01:CDS	30.0%
!	GTTATTATTAGGCTCTGATA+TGG	-	Chr4:286419-286438	MsG0480018106.01.T01:CDS	30.0%
!	TAGTACATTTTGTTAGCAAC+AGG	+	Chr4:287837-287856	None:intergenic	30.0%
!	TCATTATGGATTACTCTTGT+TGG	-	Chr4:289655-289674	MsG0480018106.01.T01:five_prime_UTR	30.0%
!	TTAAGCTAATGAATGGATTC+AGG	-	Chr4:288471-288490	MsG0480018106.01.T01:CDS	30.0%
!	TTGAACTTCTTCATGCTTTT+GGG	+	Chr4:289304-289323	None:intergenic	30.0%
!!	AATTTCAGGTTCTATTGCAA+AGG	-	Chr4:288202-288221	MsG0480018106.01.T01:intron	30.0%
!!	ACAACAGAATTTGCTAAAGA+TGG	+	Chr4:289096-289115	None:intergenic	30.0%
!!	TGTTTGATTTTGTCTACCTT+TGG	+	Chr4:286229-286248	None:intergenic	30.0%
!!	TTTAGGCCTTTCAAGTTAAA+AGG	-	Chr4:286715-286734	MsG0480018106.01.T01:intron	30.0%
!!!	AGGTCCTTCAAATTTTTTCA+AGG	+	Chr4:287995-288014	None:intergenic	30.0%
!!!	CTGCATTATTTTTGGCTTTT+AGG	-	Chr4:286698-286717	MsG0480018106.01.T01:intron	30.0%
!!!	CTTTTAAGGTTTGATCCAAA+TGG	-	Chr4:288848-288867	MsG0480018106.01.T01:intron	30.0%
!!!	TGCTTCTTTTTTAGGTGAAA+CGG	-	Chr4:287425-287444	MsG0480018106.01.T01:CDS	30.0%
!!!	TTAGCTCTTGCTTCTTTTTT+AGG	-	Chr4:287417-287436	MsG0480018106.01.T01:CDS	30.0%
!!!	TTCTGTTTTGATGTGATTGT+AGG	-	Chr4:286875-286894	MsG0480018106.01.T01:intron	30.0%
!!!	TTTGTTTTTTAAAGGTGAGG+TGG	-	Chr4:286943-286962	MsG0480018106.01.T01:intron	30.0%
	AAGATCTACATCAAAGAAGC+TGG	-	Chr4:287948-287967	MsG0480018106.01.T01:intron	35.0%
	AATAACTTCAGGAACATCCA+TGG	+	Chr4:288370-288389	None:intergenic	35.0%
	AATCAGGATTATGTTGGTGT+TGG	+	Chr4:287687-287706	None:intergenic	35.0%
	AATTCCAAAGTTGGATCACA+AGG	+	Chr4:288711-288730	None:intergenic	35.0%
	ACTAAAGACTGTGATTAGCA+AGG	+	Chr4:289480-289499	None:intergenic	35.0%
	AGCAAAAACTCTTTGTTGGT+TGG	-	Chr4:286785-286804	MsG0480018106.01.T01:intron	35.0%
	AGCTTCTTTGATGTAGATCT+TGG	+	Chr4:287949-287968	None:intergenic	35.0%
	AGGGTTGGAGAAAAAATTCT+TGG	-	Chr4:289277-289296	MsG0480018106.01.T01:intron	35.0%
	AGGTCAAATATGCTTGACTT+GGG	-	Chr4:288083-288102	MsG0480018106.01.T01:intron	35.0%
	ATAACTTCAGGAACATCCAT+GGG	+	Chr4:288369-288388	None:intergenic	35.0%
	ATTAGCAAGGGAATAGAATG+GGG	+	Chr4:289467-289486	None:intergenic	35.0%
	CAGTTAATCTCACATTCCAA+AGG	+	Chr4:289784-289803	None:intergenic	35.0%
	CCAATGGTTAAATGCTAATC+AGG	-	Chr4:288892-288911	MsG0480018106.01.T01:intron	35.0%
	CCTGATTAGCATTTAACCAT+TGG	+	Chr4:288895-288914	None:intergenic	35.0%
	CCTTTCGTTTATTCCTGAAA+AGG	-	Chr4:288577-288596	MsG0480018106.01.T01:CDS	35.0%
	CTAAAGACTGTGATTAGCAA+GGG	+	Chr4:289479-289498	None:intergenic	35.0%
	CTTGTGATTTAGCCTATGTT+TGG	-	Chr4:289686-289705	MsG0480018106.01.T01:five_prime_UTR	35.0%
	GAAGAAGTTCAACTATTGCT+TGG	-	Chr4:289312-289331	MsG0480018106.01.T01:intron	35.0%
	GAGATTTGATAAATGTGGAC+AGG	+	Chr4:287872-287891	None:intergenic	35.0%
	GAGTTGCATGATGCTTAAAT+GGG	-	Chr4:287575-287594	MsG0480018106.01.T01:CDS	35.0%
	GATATTGAAACGGCATATGT+AGG	-	Chr4:288063-288082	MsG0480018106.01.T01:intron	35.0%
	GATTAGCAAGGGAATAGAAT+GGG	+	Chr4:289468-289487	None:intergenic	35.0%
	GATTAGGCATGTTCAAAATG+TGG	+	Chr4:287736-287755	None:intergenic	35.0%
	GGATTATGTATGAGTATGAC+AGG	-	Chr4:289533-289552	MsG0480018106.01.T01:intron	35.0%
	GTGAGATTAACTGTGTTTGT+TGG	-	Chr4:289791-289810	MsG0480018106.01.T01:five_prime_UTR	35.0%
	GTGTATATAAATGAGTTGCC+CGG	+	Chr4:286461-286480	None:intergenic	35.0%
	TAGGTCAAATATGCTTGACT+TGG	-	Chr4:288082-288101	MsG0480018106.01.T01:intron	35.0%
	TCAGGAATAAACGAAAGGTA+AGG	+	Chr4:288575-288594	None:intergenic	35.0%
	TCCCTACTTGGATATTGAAA+CGG	-	Chr4:288053-288072	MsG0480018106.01.T01:intron	35.0%
	TCTACCTTTGGCATAAAACA+GGG	+	Chr4:286217-286236	None:intergenic	35.0%
	TGAAACATATTCTCTGTGTC+AGG	-	Chr4:287898-287917	MsG0480018106.01.T01:intron	35.0%
	TGACGCGAAAATCTTATCAA+GGG	-	Chr4:289341-289360	MsG0480018106.01.T01:intron	35.0%
	TGAGTTGCATGATGCTTAAA+TGG	-	Chr4:287574-287593	MsG0480018106.01.T01:CDS	35.0%
	TGATTAGCAAGGGAATAGAA+TGG	+	Chr4:289469-289488	None:intergenic	35.0%
	TGATTTAGTGCTTGTCTTCA+TGG	-	Chr4:289171-289190	MsG0480018106.01.T01:intron	35.0%
	TTAACACATCCTTACGAATC+CGG	+	Chr4:286601-286620	None:intergenic	35.0%
	TTGAACATTTAGGAGATCAG+AGG	+	Chr4:286188-286207	None:intergenic	35.0%
	TTGACGCGAAAATCTTATCA+AGG	-	Chr4:289340-289359	MsG0480018106.01.T01:intron	35.0%
	TTTACCTTGTGATCCAACTT+TGG	-	Chr4:288704-288723	MsG0480018106.01.T01:CDS	35.0%
	TTTAGGAAATCTCAGAAAGC+AGG	-	Chr4:286996-287015	MsG0480018106.01.T01:intron	35.0%
	TTTGATGTAGATCTTGGAGA+TGG	+	Chr4:287943-287962	None:intergenic	35.0%
!	AAAGGGATGTTTTTCCATGA+GGG	-	Chr4:286397-286416	MsG0480018106.01.T01:CDS	35.0%
!	AGAAGTCCTATCTTTTCTGT+GGG	+	Chr4:286538-286557	None:intergenic	35.0%
!	ATCAGGATTATGTTGGTGTT+GGG	+	Chr4:287686-287705	None:intergenic	35.0%
!	GAAAATGAACCTTTTGAGCA+GGG	-	Chr4:288231-288250	MsG0480018106.01.T01:intron	35.0%
!	GCAAAAACTCTTTGTTGGTT+GGG	-	Chr4:286786-286805	MsG0480018106.01.T01:intron	35.0%
!	GGAAAAAGATTTGGTAGACA+AGG	-	Chr4:287022-287041	MsG0480018106.01.T01:CDS	35.0%
!	GTTGAACTTCTTCATGCTTT+TGG	+	Chr4:289305-289324	None:intergenic	35.0%
!	TCCAAGTAGGGAATATTTTC+AGG	+	Chr4:288045-288064	None:intergenic	35.0%
!	TGAAAATGAACCTTTTGAGC+AGG	-	Chr4:288230-288249	MsG0480018106.01.T01:intron	35.0%
!	TGAACTTCTTCATGCTTTTG+GGG	+	Chr4:289303-289322	None:intergenic	35.0%
!	TTTGGAACCTGAAGTAGTTT+AGG	+	Chr4:288297-288316	None:intergenic	35.0%
!	TTTTCTGACTTACACTGATC+AGG	+	Chr4:287089-287108	None:intergenic	35.0%
!!	ACTTTTTCTTGTCCCTTTTC+AGG	+	Chr4:288593-288612	None:intergenic	35.0%
!!	AGGGAAAGCATTGAACATTT+AGG	+	Chr4:286198-286217	None:intergenic	35.0%
!!	CCTTTTCAGGAATAAACGAA+AGG	+	Chr4:288580-288599	None:intergenic	35.0%
!!!	GCTTCTTTTTTAGGTGAAAC+GGG	-	Chr4:287426-287445	MsG0480018106.01.T01:CDS	35.0%
!!!	TTTTTTGTAGTATTGGGCTG+TGG	-	Chr4:286910-286929	MsG0480018106.01.T01:intron	35.0%
	AACATTTAGGAGATCAGAGG+CGG	+	Chr4:286185-286204	None:intergenic	40.0%
	AACTTTAGATCATGGGCAGT+AGG	+	Chr4:289063-289082	None:intergenic	40.0%
	AAGATTCATGTCTCGAGGAA+GGG	-	Chr4:287219-287238	MsG0480018106.01.T01:intron	40.0%
	ACATCAAGCCCAATAGTGTT+GGG	-	Chr4:286481-286500	MsG0480018106.01.T01:intron	40.0%
	AGACGCATTAGAATTGCCTT+TGG	-	Chr4:289765-289784	MsG0480018106.01.T01:five_prime_UTR	40.0%
	AGATGTTCAGTCTCATCATC+AGG	+	Chr4:288015-288034	None:intergenic	40.0%
	AGCAGGTGTGGAAAAAGATT+TGG	-	Chr4:287013-287032	MsG0480018106.01.T01:intron	40.0%
	CACTTTGCCTAAACTACTTC+AGG	-	Chr4:288287-288306	MsG0480018106.01.T01:intron	40.0%
	CATGCAATAAAGTTGTGCAG+AGG	+	Chr4:286158-286177	None:intergenic	40.0%
	CTAGAGCGAGCATAAATTTC+AGG	+	Chr4:288264-288283	None:intergenic	40.0%
	CTGAAATTTATGCTCGCTCT+AGG	-	Chr4:288262-288281	MsG0480018106.01.T01:intron	40.0%
	GAATGTTTAGGGAAGGTTTG+TGG	-	Chr4:289512-289531	MsG0480018106.01.T01:intron	40.0%
	GAGCCTAATAATAACCCTCA+TGG	+	Chr4:286414-286433	None:intergenic	40.0%
	GCAGGAGTTTCAACAATTTC+AGG	-	Chr4:288188-288207	MsG0480018106.01.T01:intron	40.0%
	GCCGTTTCAATATCCAAGTA+GGG	+	Chr4:288057-288076	None:intergenic	40.0%
	GCCTGAAAATATTCCCTACT+TGG	-	Chr4:288041-288060	MsG0480018106.01.T01:intron	40.0%
	GTCTACCTTTGGCATAAAAC+AGG	+	Chr4:286218-286237	None:intergenic	40.0%
	GTGCAGCATCTTAGTGAAAT+TGG	-	Chr4:287380-287399	MsG0480018106.01.T01:intron	40.0%
	TAACTTCAGGAACATCCATG+GGG	+	Chr4:288368-288387	None:intergenic	40.0%
	TCAAGCGTTATCAACCTGTT+TGG	-	Chr4:288612-288631	MsG0480018106.01.T01:CDS	40.0%
	TCGAGACATGAATCTTCTTC+AGG	+	Chr4:287215-287234	None:intergenic	40.0%
	TGAAGAAGATTCATGTCTCG+AGG	-	Chr4:287214-287233	MsG0480018106.01.T01:intron	40.0%
	TTACCAATGAGGTAAAGAGG+AGG	-	Chr4:287150-287169	MsG0480018106.01.T01:CDS	40.0%
	TTCTTGCTCCAGATCTTATC+AGG	-	Chr4:288532-288551	MsG0480018106.01.T01:CDS	40.0%
	TTTCAAGGAAAGACACCGAA+GGG	+	Chr4:287980-287999	None:intergenic	40.0%
!	AAACTCTTTGTTGGTTGGGT+TGG	-	Chr4:286790-286809	MsG0480018106.01.T01:intron	40.0%
!	CTATCTTTTCTGTGGGACTT+GGG	+	Chr4:286531-286550	None:intergenic	40.0%
!	CTTCAGGTTCCAAATATACG+AGG	-	Chr4:288303-288322	MsG0480018106.01.T01:CDS	40.0%
!	CTTTCCCTGTTTTATGCCAA+AGG	-	Chr4:286210-286229	MsG0480018106.01.T01:intron	40.0%
!	GAAAGGGATGTTTTTCCATG+AGG	-	Chr4:286396-286415	MsG0480018106.01.T01:CDS	40.0%
!	GAGAAGTCCTATCTTTTCTG+TGG	+	Chr4:286539-286558	None:intergenic	40.0%
!	GAGCATAAATTTCAGGTCGA+GGG	+	Chr4:288257-288276	None:intergenic	40.0%
!	GCTGATTCTGATTTCCAAAC+AGG	+	Chr4:288629-288648	None:intergenic	40.0%
!	TGACTAGAGAACAGCTGTTT+TGG	-	Chr4:289382-289401	MsG0480018106.01.T01:intron	40.0%
!	TGCCGTTTCAATATCCAAGT+AGG	+	Chr4:288058-288077	None:intergenic	40.0%
!!	CAAGGGTTCTAAGAATGACT+AGG	-	Chr4:289358-289377	MsG0480018106.01.T01:intron	40.0%
!!	TCAAATATGCTTGACTTGGG+AGG	-	Chr4:288086-288105	MsG0480018106.01.T01:intron	40.0%
!!	TCTGCTTTTAATCCAAGTGC+AGG	-	Chr4:288974-288993	MsG0480018106.01.T01:intron	40.0%
!!	TTTTCAAGGAAAGACACCGA+AGG	+	Chr4:287981-288000	None:intergenic	40.0%
!!!	CTTTTTTAGGTGAAACGGGA+GGG	-	Chr4:287430-287449	MsG0480018106.01.T01:CDS	40.0%
!!!	TCTTTTTTAGGTGAAACGGG+AGG	-	Chr4:287429-287448	MsG0480018106.01.T01:CDS	40.0%
	AAAGGTGAGGTGGTAAAGCA+TGG	-	Chr4:286953-286972	MsG0480018106.01.T01:intron	45.0%
	AAATGAATGGAGGGATGTGG+AGG	-	Chr4:287274-287293	MsG0480018106.01.T01:intron	45.0%
	AAATGAGTTGCCCGGTCAAT+AGG	+	Chr4:286453-286472	None:intergenic	45.0%
	ACATTTAGGAGATCAGAGGC+GGG	+	Chr4:286184-286203	None:intergenic	45.0%
	ACCAAATGAATGGAGGGATG+TGG	-	Chr4:287271-287290	MsG0480018106.01.T01:intron	45.0%
	ACTGAAGGAGCTAAGGAAGA+AGG	-	Chr4:289257-289276	MsG0480018106.01.T01:intron	45.0%
	AGACAGGACCAAATGAATGG+AGG	-	Chr4:287264-287283	MsG0480018106.01.T01:intron	45.0%
	AGATTCATGTCTCGAGGAAG+GGG	-	Chr4:287220-287239	MsG0480018106.01.T01:intron	45.0%
	CAAGTGCAGGACAGCTTATT+GGG	-	Chr4:288987-289006	MsG0480018106.01.T01:intron	45.0%
	CACATCAAGCCCAATAGTGT+TGG	-	Chr4:286480-286499	MsG0480018106.01.T01:intron	45.0%
	CATCATGCAACTCATGTAGC+AGG	+	Chr4:287568-287587	None:intergenic	45.0%
	CATGATGCTTAAATGGGTGC+TGG	-	Chr4:287581-287600	MsG0480018106.01.T01:CDS	45.0%
	CCAAGTCCCACAGAAAAGAT+AGG	-	Chr4:286529-286548	MsG0480018106.01.T01:intron	45.0%
	CTAACAACTGCAGCTGCAAA+TGG	+	Chr4:289736-289755	None:intergenic	45.0%
	CTGAAGGAGCTAAGGAAGAA+GGG	-	Chr4:289258-289277	MsG0480018106.01.T01:intron	45.0%
	CTGTCACACCCAACACTATT+GGG	+	Chr4:286492-286511	None:intergenic	45.0%
	GAAATCTCAGAAAGCAGGTG+TGG	-	Chr4:287001-287020	MsG0480018106.01.T01:intron	45.0%
	GAAGATTCATGTCTCGAGGA+AGG	-	Chr4:287218-287237	MsG0480018106.01.T01:intron	45.0%
	GACAGGACCAAATGAATGGA+GGG	-	Chr4:287265-287284	MsG0480018106.01.T01:intron	45.0%
	GAGAGACAGGACCAAATGAA+TGG	-	Chr4:287261-287280	MsG0480018106.01.T01:intron	45.0%
	GCAGAAAGTGGTGAAACTGA+AGG	-	Chr4:289242-289261	MsG0480018106.01.T01:intron	45.0%
	GCTTAGCTTAGATTGGAGCT+TGG	+	Chr4:285957-285976	None:intergenic	45.0%
	GGTTCAGTCTACTCTTGAGA+AGG	-	Chr4:288668-288687	MsG0480018106.01.T01:CDS	45.0%
	GTAGACTGAACCTGTTGTAG+AGG	+	Chr4:288660-288679	None:intergenic	45.0%
	TCCACATCCCTCCATTCATT+TGG	+	Chr4:287275-287294	None:intergenic	45.0%
	TGGTATCAGAGCCTATTGAC+CGG	-	Chr4:286439-286458	MsG0480018106.01.T01:CDS	45.0%
	TGGTGAAACTGAAGGAGCTA+AGG	-	Chr4:289250-289269	MsG0480018106.01.T01:intron	45.0%
	TTCAAGGAAAGACACCGAAG+GGG	+	Chr4:287979-287998	None:intergenic	45.0%
	TTGGAGAGTGAAGTGAAGTG+AGG	+	Chr4:285938-285957	None:intergenic	45.0%
!	CAATAGTGTTGGGTGTGACA+GGG	-	Chr4:286491-286510	MsG0480018106.01.T01:intron	45.0%
!	CCTATCTTTTCTGTGGGACT+TGG	+	Chr4:286532-286551	None:intergenic	45.0%
!	CGAGCATAAATTTCAGGTCG+AGG	+	Chr4:288258-288277	None:intergenic	45.0%
!	CTTACGAATCCGGCTTGTAA+GGG	+	Chr4:286591-286610	None:intergenic	45.0%
!	TAGTATTGGGCTGTGGCTTA+GGG	-	Chr4:286917-286936	MsG0480018106.01.T01:intron	45.0%
!	TTACGAATCCGGCTTGTAAG+GGG	+	Chr4:286590-286609	None:intergenic	45.0%
!	TTTGAAACTTGGATGCTGCC+TGG	-	Chr4:287607-287626	MsG0480018106.01.T01:CDS	45.0%
!!!	GGTGCTGGCATTTTGAAACT+TGG	-	Chr4:287596-287615	MsG0480018106.01.T01:CDS	45.0%
!!	AAATTAAAAAAAAATGAAAA+TGG	+	Chr4:286079-286098	None:intergenic	5.0%
!!	AATTAAAAAAAAATGAAAAT+GGG	+	Chr4:286078-286097	None:intergenic	5.0%
	ACAACTCTCCCCTTACAAGC+CGG	-	Chr4:286579-286598	MsG0480018106.01.T01:intron	50.0%
	AGGAGCTAAGGAAGAAGGGT+TGG	-	Chr4:289262-289281	MsG0480018106.01.T01:intron	50.0%
	CAAGGGAATAGAATGGGGCA+TGG	+	Chr4:289462-289481	None:intergenic	50.0%
	CCAAGTGCAGGACAGCTTAT+TGG	-	Chr4:288986-289005	MsG0480018106.01.T01:intron	50.0%
	CCAATAAGCTGTCCTGCACT+TGG	+	Chr4:288989-289008	None:intergenic	50.0%
	CCTGTCACACCCAACACTAT+TGG	+	Chr4:286493-286512	None:intergenic	50.0%
	CCTTACAAGCCGGATTCGTA+AGG	-	Chr4:286589-286608	MsG0480018106.01.T01:intron	50.0%
	CTGAACCTGTTGTAGAGGAG+TGG	+	Chr4:288655-288674	None:intergenic	50.0%
	GAATCAAAGCCCAACACTGG+TGG	-	Chr4:287062-287081	MsG0480018106.01.T01:CDS	50.0%
	GAGCCTCCTCTTTACCTCAT+TGG	+	Chr4:287156-287175	None:intergenic	50.0%
	GAGGAATCAAAGCCCAACAC+TGG	-	Chr4:287059-287078	MsG0480018106.01.T01:CDS	50.0%
	GAGTATGACAGGGCATAGCA+AGG	-	Chr4:289544-289563	MsG0480018106.01.T01:intron	50.0%
	GGTATCAGAGCCTATTGACC+GGG	-	Chr4:286440-286459	MsG0480018106.01.T01:CDS	50.0%
	GTTGAAACTCCTGCGCACTA+CGG	+	Chr4:288182-288201	None:intergenic	50.0%
	TGAGGTAAAGAGGAGGCTCA+AGG	-	Chr4:287157-287176	MsG0480018106.01.T01:CDS	50.0%
	TGATCAGGACCACCAGTGTT+GGG	+	Chr4:287074-287093	None:intergenic	50.0%
	TGCAGGACAGCTTATTGGGA+GGG	-	Chr4:288991-289010	MsG0480018106.01.T01:intron	50.0%
	TGGGTGTGACAGGGTGTATT+GGG	-	Chr4:286500-286519	MsG0480018106.01.T01:intron	50.0%
	TTGGGTGTGACAGGGTGTAT+TGG	-	Chr4:286499-286518	MsG0480018106.01.T01:intron	50.0%
!	CCAATAGTGTTGGGTGTGAC+AGG	-	Chr4:286490-286509	MsG0480018106.01.T01:intron	50.0%
!	CCTTACGAATCCGGCTTGTA+AGG	+	Chr4:286592-286611	None:intergenic	50.0%
!	CGATTCTTGTGCTGATGCTG+AGG	-	Chr4:287112-287131	MsG0480018106.01.T01:CDS	50.0%
!	GTAGTATTGGGCTGTGGCTT+AGG	-	Chr4:286916-286935	MsG0480018106.01.T01:intron	50.0%
!	GTGTTGGGCTTTGATTCCTC+AGG	+	Chr4:287059-287078	None:intergenic	50.0%
	AGAAGCTGGCATCTCCCCTT+CGG	-	Chr4:287962-287981	MsG0480018106.01.T01:intron	55.0%
	AGGGGAGGATGAAGAGGAAG+AGG	-	Chr4:287238-287257	MsG0480018106.01.T01:intron	55.0%
	CTGATCAGGACCACCAGTGT+TGG	+	Chr4:287075-287094	None:intergenic	55.0%
	GAAGAGGAAGAGGGAGAGAC+AGG	-	Chr4:287248-287267	MsG0480018106.01.T01:intron	55.0%
	GCACTACGGCTGTAACAGGT+AGG	+	Chr4:288168-288187	None:intergenic	55.0%
	GCAGGACAGCTTATTGGGAG+GGG	-	Chr4:288992-289011	MsG0480018106.01.T01:intron	55.0%
	GGGGAGGATGAAGAGGAAGA+GGG	-	Chr4:287239-287258	MsG0480018106.01.T01:intron	55.0%
	GTGCAGGACAGCTTATTGGG+AGG	-	Chr4:288990-289009	MsG0480018106.01.T01:intron	55.0%
	TTCAGGAACATCCATGGGGC+AGG	+	Chr4:288364-288383	None:intergenic	55.0%
	TTCATGTCTCGAGGAAGGGG+AGG	-	Chr4:287223-287242	MsG0480018106.01.T01:intron	55.0%
!	GGCTTTGATTCCTCAGGCTC+AGG	+	Chr4:287053-287072	None:intergenic	55.0%
	AGGCAGAAGGCCAGCAATGG+TGG	-	Chr4:287294-287313	MsG0480018106.01.T01:intron	60.0%
	CAAAGCCTCGCCACCATTGC+TGG	+	Chr4:287307-287326	None:intergenic	60.0%
	CCATGGGGCAGGCCACATAT+GGG	+	Chr4:288353-288372	None:intergenic	60.0%
	CGAGGAAGGGGAGGATGAAG+AGG	-	Chr4:287232-287251	MsG0480018106.01.T01:intron	60.0%
	CTGCGCACTACGGCTGTAAC+AGG	+	Chr4:288172-288191	None:intergenic	60.0%
	CTGTTACAGCCGTAGTGCGC+AGG	-	Chr4:288170-288189	MsG0480018106.01.T01:intron	60.0%
	GCTCGCCACTCCTCTACAAC+AGG	-	Chr4:288647-288666	MsG0480018106.01.T01:CDS	60.0%
	TCCATGGGGCAGGCCACATA+TGG	+	Chr4:288354-288373	None:intergenic	60.0%
	TGGAGGCAGAAGGCCAGCAA+TGG	-	Chr4:287291-287310	MsG0480018106.01.T01:intron	60.0%
	TGGAGGGATGTGGAGGCAGA+AGG	-	Chr4:287281-287300	MsG0480018106.01.T01:intron	60.0%
	CAAGGCAGTGCCTGAGCCTG+AGG	-	Chr4:287040-287059	MsG0480018106.01.T01:CDS	65.0%
	CCCATATGTGGCCTGCCCCA+TGG	-	Chr4:288350-288369	MsG0480018106.01.T01:CDS	65.0%
	GGTCGAGGGCCCTGCTCAAA+AGG	+	Chr4:288243-288262	None:intergenic	65.0%
!	GAAGGCCAGCAATGGTGGCG+AGG	-	Chr4:287299-287318	MsG0480018106.01.T01:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	285877	289828	285877	ID=MsG0480018106.01;Name=MsG0480018106.01
Chr4	mRNA	285877	289828	285877	ID=MsG0480018106.01.T01;Parent=MsG0480018106.01;Name=MsG0480018106.01.T01;_AED=0.37;_eAED=0.37;_QI=249\|1\|1\|1\|0.75\|0.6\|5\|343\|425
Chr4	exon	288298	288808	288298	ID=MsG0480018106.01.T01:exon:584;Parent=MsG0480018106.01.T01
Chr4	exon	289655	289828	289655	ID=MsG0480018106.01.T01:exon:583;Parent=MsG0480018106.01.T01
Chr4	five_prime_UTR	289655	289828	289655	ID=MsG0480018106.01.T01:five_prime_utr;Parent=MsG0480018106.01.T01
Chr4	five_prime_UTR	288734	288808	288734	ID=MsG0480018106.01.T01:five_prime_utr;Parent=MsG0480018106.01.T01
Chr4	CDS	288298	288733	288298	ID=MsG0480018106.01.T01:cds;Parent=MsG0480018106.01.T01
Chr4	CDS	287381	287785	287381	ID=MsG0480018106.01.T01:cds;Parent=MsG0480018106.01.T01
Chr4	CDS	287016	287212	287016	ID=MsG0480018106.01.T01:cds;Parent=MsG0480018106.01.T01
Chr4	CDS	286220	286459	286220	ID=MsG0480018106.01.T01:cds;Parent=MsG0480018106.01.T01
Chr4	three_prime_UTR	285877	286219	285877	ID=MsG0480018106.01.T01:three_prime_utr;Parent=MsG0480018106.01.T01
Chr4	mRNA	285877	288906	285877	ID=MsG0480018106.01.T02;Parent=MsG0480018106.01;Name=MsG0480018106.01.T02;_AED=0.38;_eAED=0.38;_QI=173\|1\|1\|1\|1\|1\|4\|343\|425
Chr4	exon	288298	288906	288298	ID=MsG0480018106.01.T02:exon:588;Parent=MsG0480018106.01.T02
Chr4	five_prime_UTR	288734	288906	288734	ID=MsG0480018106.01.T02:five_prime_utr;Parent=MsG0480018106.01.T02
Chr4	CDS	288298	288733	288298	ID=MsG0480018106.01.T02:cds;Parent=MsG0480018106.01.T02
Chr4	CDS	287381	287785	287381	ID=MsG0480018106.01.T02:cds;Parent=MsG0480018106.01.T02
Chr4	CDS	287016	287212	287016	ID=MsG0480018106.01.T02:cds;Parent=MsG0480018106.01.T02
Chr4	CDS	286220	286459	286220	ID=MsG0480018106.01.T02:cds;Parent=MsG0480018106.01.T02
Chr4	three_prime_UTR	285877	286219	285877	ID=MsG0480018106.01.T02:three_prime_utr;Parent=MsG0480018106.01.T02

Gene Sequence

>MsG0480018106.01.T01

ATGGATTTTTTGAAGATTAAAAAATTTAGGAAATCTCAGAAAGCAGGTGTGGAAAAAGATTTGGTAGACAAGGCAGTGCCTGAGCCTGAGGAATCAAAGCCCAACACTGGTGGTCCTGATCAGTGTAAGTCAGAAAATGTCGATTCTTGTGCTGATGCTGAGGACGACGATGATTTTATTACCAATGAGGTAAAGAGGAGGCTCAAGGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCATGTCTCGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACAGGACCAAATGAATGGAGGGATGTGGAGGCAGAAGGCCAGCAATGGTGGCGAGGCTTTGATGCTGTTTTTGAAAAGTACTGTGAAAGAATGTTATTCTTTGATCGGATGAATGTGCAGCATCTTAGTGAAATTGGAAAAGGTTCACAGAACACTTCAACTCCATCTCCAAGATCTACATCAAAGAAGCTGGCATCTCCCCTTCGGTGTCTTTCCTTGAAAAAATTTGAAGGACCTGATGATGAGACTGAACATCTTCAAGAGCCTGAAAATATTCCCTACTTGGATATTGAAACGGCATATGTAGGTCAAATATGCTTGACTTGGGAGGCTCTTCATTGTCAATACTCTCATATGAGTTATAAGATATCTTGGCAACATGAGAATCCTACCTGTTACAGCCGTAGTGCGCAGGAGTTTCAACAATTTCAGGTTCTATTGCAAAGGTTTATTGAAAATGAACCTTTTGAGCAGGGCCCTCGACCTGAAATTTATGCTCGCTCTAGGAACACTTTGCCTAAACTACTTCAGGTTCCAAATATACGAGGTTCAGATCATGAAGTAACAGATGAGTCAGATATCAGAGTTCTTGCTCCAGATCTTATCAGGATAATTGAAAACTCTATCCTTACCTTTCGTTTATTCCTGAAAAGGGACAAGAAAAAGTCAAGCGTTATCAACCTGTTTGGAAATCAGAATCAGCTCGCCACTCCTCTACAACAGGTTCAGTCTACTCTTGAGAAGAAAGTGGTGAAACTGAAGGAGCTAAGGAAGAAGGGTTGGAGAAAAAATTCTTGGCCCCAAAAGCATGAAGAAGTTCAACTATTGCTTGGCCTTATTGACGCGAAAATCTTATCAAGGGTTCTAAGAATGACTAGGATGACTAGAGAACAGCTGTTTTGGTGTGAAGAAAAGATGAAAAAACTTGATTTATCGAATAATAGGTTAGAGAGGGATCCATGCCCCATTCTATTCCCTTGCTAA

>MsG0480018106.01.T02

Protein sequence

>MsG0480018106.01.T01

MDFLKIKKFRKSQKAGVEKDLVDKAVPEPEESKPNTGGPDQCKSENVDSCADAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCLEEGEDEEEEGETGPNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMNVQHLSEIGKGSQNTSTPSPRSTSKKLASPLRCLSLKKFEGPDDETEHLQEPENIPYLDIETAYVGQICLTWEALHCQYSHMSYKISWQHENPTCYSRSAQEFQQFQVLLQRFIENEPFEQGPRPEIYARSRNTLPKLLQVPNIRGSDHEVTDESDIRVLAPDLIRIIENSILTFRLFLKRDKKKSSVINLFGNQNQLATPLQQVQSTLEKKVVKLKELRKKGWRKNSWPQKHEEVQLLLGLIDAKILSRVLRMTRMTREQLFWCEEKMKKLDLSNNRLERDPCPILFPC*

>MsG0480018106.01.T02