AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0013970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0013970 MtrunA17_Chr1g0184121 96.139 259 10 0 1 259 1 259 0.0 530
Msa0013970 MtrunA17_Chr1g0184121 90.132 152 15 0 504 655 1 152 1.15e-94 295
Msa0013970 MtrunA17_Chr1g0184111 93.050 259 18 0 1 259 1 259 1.92e-179 513
Msa0013970 MtrunA17_Chr1g0184111 94.079 152 9 0 504 655 1 152 3.51e-98 305
Msa0013970 MtrunA17_Chr1g0184151 67.308 260 83 2 1 259 1 259 1.94e-131 390
Msa0013970 MtrunA17_Chr1g0184151 69.935 153 45 1 504 655 1 153 4.06e-72 236
Msa0013970 MtrunA17_Chr1g0184101 68.077 260 81 2 1 259 1 259 3.38e-130 387
Msa0013970 MtrunA17_Chr1g0184101 71.895 153 42 1 504 655 1 153 8.04e-72 236
Msa0013970 MtrunA17_Chr1g0184161 66.923 260 84 2 1 259 1 259 5.09e-127 379
Msa0013970 MtrunA17_Chr1g0184161 64.052 153 54 1 504 655 1 153 5.64e-66 220
Msa0013970 MtrunA17_Chr6g0455481 44.944 267 140 5 2 265 6 268 1.10e-68 227
Msa0013970 MtrunA17_Chr6g0455481 43.312 157 76 5 505 655 6 155 5.36e-29 118
Msa0013970 MtrunA17_Chr7g0220011 45.669 254 133 3 13 265 15 264 4.27e-68 225
Msa0013970 MtrunA17_Chr7g0220011 40.000 140 81 1 516 655 15 151 2.25e-27 113
Msa0013970 MtrunA17_Chr7g0220001 45.669 254 133 3 13 265 17 266 1.40e-67 224
Msa0013970 MtrunA17_Chr7g0220001 41.429 140 79 1 516 655 17 153 6.46e-27 112
Msa0013970 MtrunA17_Chr1g0184141 70.543 129 37 1 76 204 1 128 7.21e-64 207
Msa0013970 MtrunA17_Chr1g0184141 70.130 77 23 0 579 655 1 77 2.69e-35 129
Msa0013970 MtrunA17_Chr3g0128001 41.923 260 146 3 3 261 4 259 9.06e-61 206
Msa0013970 MtrunA17_Chr3g0128001 35.333 150 93 2 506 655 4 149 1.09e-22 99.8
Msa0013970 MtrunA17_Chr8g0345831 38.760 258 156 2 9 265 13 269 4.28e-57 196
Msa0013970 MtrunA17_Chr8g0345831 35.862 145 91 2 512 655 13 156 9.58e-23 100
Msa0013970 MtrunA17_Chr7g0250511 38.306 248 148 5 11 255 22 267 6.23e-51 180
Msa0013970 MtrunA17_Chr7g0250511 40.972 144 82 3 514 655 22 164 3.66e-31 125
Msa0013970 MtrunA17_Chr5g0412651 38.043 276 155 6 1 265 1 271 4.91e-50 177
Msa0013970 MtrunA17_Chr5g0412651 35.032 157 97 4 504 655 1 157 1.21e-17 85.1
Msa0013970 MtrunA17_Chr5g0412671 37.681 276 156 6 1 265 1 271 2.62e-49 176
Msa0013970 MtrunA17_Chr5g0412671 34.000 150 95 3 504 649 1 150 3.06e-17 83.6
Msa0013970 MtrunA17_Chr1g0179801 33.457 269 165 5 9 265 33 299 1.14e-42 158
Msa0013970 MtrunA17_Chr1g0179801 30.939 181 110 6 485 655 5 180 5.38e-18 86.7
Msa0013970 MtrunA17_Chr5g0412681 38.000 250 134 7 25 265 21 258 1.91e-42 156
Msa0013970 MtrunA17_Chr5g0412681 35.115 131 75 5 528 655 21 144 1.28e-12 69.7
Msa0013970 MtrunA17_Chr7g0225881 34.221 263 161 5 9 265 34 290 7.17e-42 155
Msa0013970 MtrunA17_Chr7g0225881 30.709 127 81 3 512 633 34 158 4.35e-12 68.2
Msa0013970 MtrunA17_Chr1g0162351 32.014 278 168 6 4 261 37 313 4.36e-40 151
Msa0013970 MtrunA17_Chr4g0055591 38.462 247 139 5 36 281 60 294 6.42e-40 150
Msa0013970 MtrunA17_Chr4g0011311 37.555 229 131 4 36 259 66 287 1.11e-39 148
Msa0013970 MtrunA17_Chr1g0162321 31.959 291 173 7 4 274 37 322 1.31e-39 150
Msa0013970 MtrunA17_Chr7g0265221 31.802 283 170 5 3 265 27 306 3.46e-39 148
Msa0013970 MtrunA17_Chr7g0265221 25.000 156 110 2 506 655 27 181 3.42e-12 68.6
Msa0013970 MtrunA17_Chr6g0472861 35.632 261 153 6 9 259 34 289 5.72e-39 147
Msa0013970 MtrunA17_Chr8g0336751 38.793 232 124 7 36 259 93 314 1.25e-38 147
Msa0013970 MtrunA17_Chr8g0364471 35.802 243 140 5 36 273 66 297 1.76e-38 146
Msa0013970 MtrunA17_Chr8g0348081 34.979 243 143 5 25 259 46 281 3.33e-38 145
Msa0013970 MtrunA17_Chr7g0242551 32.576 264 163 6 9 259 21 282 1.81e-37 143
Msa0013970 MtrunA17_Chr7g0242551 28.105 153 99 4 512 655 21 171 8.38e-11 64.3
Msa0013970 MtrunA17_Chr3g0114871 31.559 263 171 5 5 261 7 266 3.24e-37 140
Msa0013970 MtrunA17_Chr3g0114871 28.289 152 102 4 508 655 7 155 2.35e-11 65.1
Msa0013970 MtrunA17_Chr8g0354261 34.884 258 148 7 32 281 63 308 4.54e-37 142
Msa0013970 MtrunA17_Chr8g0336761 33.333 249 151 5 25 265 46 287 1.43e-36 140
Msa0013970 MtrunA17_Chr4g0045411 33.818 275 154 9 18 274 12 276 1.56e-36 140
Msa0013970 MtrunA17_Chr4g0006371 33.333 276 154 9 9 259 20 290 1.87e-36 140
Msa0013970 MtrunA17_Chr4g0006371 31.098 164 89 5 512 655 20 179 4.60e-11 65.1
Msa0013970 MtrunA17_Chr8g0336781 32.296 257 165 4 33 286 91 341 2.26e-36 141
Msa0013970 MtrunA17_Chr5g0426891 31.879 298 182 9 3 290 5 291 1.84e-35 137
Msa0013970 MtrunA17_Chr8g0336851 33.478 230 140 4 36 259 59 281 3.34e-35 137
Msa0013970 MtrunA17_Chr8g0354241 35.060 251 143 7 32 274 63 301 4.26e-35 137
Msa0013970 MtrunA17_Chr2g0311831 30.357 336 206 9 10 334 40 358 6.40e-35 136
Msa0013970 MtrunA17_Chr8g0336861 32.083 240 155 4 25 259 46 282 9.60e-35 135
Msa0013970 MtrunA17_Chr3g0126741 34.874 238 146 3 33 265 55 288 1.02e-34 135
Msa0013970 MtrunA17_Chr8g0362741 37.561 205 121 3 65 267 83 282 1.59e-34 132
Msa0013970 MtrunA17_Chr1g0184241 32.526 289 181 6 9 293 40 318 1.94e-34 134
Msa0013970 MtrunA17_Chr2g0311741 35.686 255 138 8 34 278 24 262 2.30e-34 133
Msa0013970 MtrunA17_Chr5g0424211 29.104 268 179 6 5 265 9 272 3.26e-34 133
Msa0013970 MtrunA17_Chr2g0311701 34.630 257 151 6 36 286 68 313 3.62e-34 134
Msa0013970 MtrunA17_Chr1g0187821 35.652 230 134 5 36 259 66 287 3.86e-34 134
Msa0013970 MtrunA17_Chr4g0050031 32.819 259 161 5 3 252 24 278 3.86e-34 134
Msa0013970 MtrunA17_Chr1g0167911 29.249 253 172 4 9 259 26 273 7.79e-34 132
Msa0013970 MtrunA17_Chr3g0125201 33.610 241 136 9 36 265 2 229 1.24e-33 130
Msa0013970 MtrunA17_Chr5g0424201 28.517 263 181 4 7 265 13 272 1.68e-33 131
Msa0013970 MtrunA17_Chr3g0109041 31.660 259 161 6 8 255 15 268 2.25e-33 131
Msa0013970 MtrunA17_Chr2g0311761 32.028 281 167 7 10 278 40 308 3.56e-33 131
Msa0013970 MtrunA17_Chr5g0437181 33.206 262 161 9 13 264 24 281 5.68e-33 130
Msa0013970 MtrunA17_Chr7g0266651 30.851 282 183 5 9 285 30 304 6.31e-33 130
Msa0013970 MtrunA17_Chr1g0167951 32.246 276 167 7 9 276 26 289 6.69e-33 130
Msa0013970 MtrunA17_Chr3g0102041 33.462 260 157 8 4 255 9 260 9.92e-33 129
Msa0013970 MtrunA17_Chr4g0066121 32.946 258 155 5 10 259 35 282 1.17e-32 129
Msa0013970 MtrunA17_Chr7g0235951 34.513 226 140 4 37 259 67 287 1.55e-32 129
Msa0013970 MtrunA17_Chr2g0311681 32.443 262 163 5 36 290 62 316 2.63e-32 128
Msa0013970 MtrunA17_Chr8g0371931 31.746 252 159 6 12 255 14 260 5.01e-32 127
Msa0013970 MtrunA17_Chr8g0375571 29.389 262 168 6 8 259 16 270 8.61e-32 127
Msa0013970 MtrunA17_Chr8g0336631 31.276 243 153 4 25 259 46 282 9.42e-32 127
Msa0013970 MtrunA17_Chr1g0162361 33.195 241 146 4 37 265 27 264 1.13e-31 126
Msa0013970 MtrunA17_Chr2g0296371 32.331 266 167 7 8 265 22 282 1.13e-31 126
Msa0013970 MtrunA17_Chr2g0311711 34.498 229 138 5 36 259 66 287 1.63e-31 126
Msa0013970 MtrunA17_Chr3g0113641 32.422 256 161 7 13 259 25 277 3.07e-31 125
Msa0013970 MtrunA17_Chr2g0311921 33.186 226 144 4 37 259 54 275 3.16e-31 125
Msa0013970 MtrunA17_Chr1g0187831 34.348 230 135 5 37 259 70 290 3.16e-31 125
Msa0013970 MtrunA17_Chr5g0405411 30.268 261 169 6 3 255 5 260 3.35e-31 125
Msa0013970 MtrunA17_Chr7g0236011 35.443 237 137 4 36 265 66 293 3.39e-31 125
Msa0013970 MtrunA17_Chr8g0335411 36.564 227 136 4 36 259 66 287 3.76e-31 125
Msa0013970 MtrunA17_Chr8g0371921 31.349 252 160 6 12 255 14 260 4.06e-31 125
Msa0013970 MtrunA17_Chr5g0398291 28.897 263 175 5 9 259 14 276 6.86e-31 124
Msa0013970 MtrunA17_Chr2g0311631 31.250 304 168 9 9 294 28 308 7.71e-31 124
Msa0013970 MtrunA17_Chr2g0311691 33.074 257 155 6 36 286 62 307 2.08e-30 123
Msa0013970 MtrunA17_Chr1g0187811 32.895 228 141 4 37 259 188 408 7.90e-30 123
Msa0013970 MtrunA17_Chr5g0423201 31.624 234 142 7 37 261 47 271 1.62e-29 120
Msa0013970 MtrunA17_Chr4g0045441 31.734 271 160 9 23 274 13 277 1.79e-29 120
Msa0013970 MtrunA17_Chr1g0167961 34.052 232 135 6 36 259 68 289 2.56e-29 120
Msa0013970 MtrunA17_Chr1g0162191 32.584 267 146 9 11 259 20 270 2.68e-29 119
Msa0013970 MtrunA17_Chr1g0161041 33.929 280 178 4 9 286 66 340 3.28e-29 120
Msa0013970 MtrunA17_Chr1g0161041 34.965 143 83 4 512 649 66 203 1.02e-13 73.6
Msa0013970 MtrunA17_Chr2g0311861 33.333 234 124 5 37 265 64 270 3.97e-29 119
Msa0013970 MtrunA17_Chr7g0239821 29.658 263 175 7 8 265 34 291 4.29e-29 119
Msa0013970 MtrunA17_Chr4g0066991 32.639 288 146 7 1 273 23 277 5.55e-29 118
Msa0013970 MtrunA17_Chr1g0161111 34.043 282 175 5 9 286 102 376 1.29e-28 119
Msa0013970 MtrunA17_Chr1g0161111 32.168 143 87 4 512 649 102 239 1.18e-11 67.4
Msa0013970 MtrunA17_Chr8g0375701 32.900 231 133 9 35 255 53 271 1.41e-28 117
Msa0013970 MtrunA17_Chr7g0239101 28.627 255 176 5 14 265 31 282 1.53e-28 117
Msa0013970 MtrunA17_Chr8g0375671 29.183 257 175 4 8 259 23 277 1.78e-28 117
Msa0013970 MtrunA17_Chr7g0232161 29.237 236 152 6 37 265 60 287 5.33e-28 115
Msa0013970 MtrunA17_Chr5g0421011 29.921 254 173 4 8 259 18 268 1.01e-27 115
Msa0013970 MtrunA17_Chr7g0239111 28.462 260 170 9 14 265 31 282 1.04e-27 115
Msa0013970 MtrunA17_Chr5g0423221 29.885 261 165 8 8 259 42 293 1.04e-27 115
Msa0013970 MtrunA17_Chr5g0423251 30.556 252 162 7 14 259 24 268 1.60e-27 114
Msa0013970 MtrunA17_Chr1g0161081 32.509 283 178 5 9 286 43 317 1.71e-27 114
Msa0013970 MtrunA17_Chr1g0161081 31.469 143 88 4 512 649 43 180 1.06e-11 67.0
Msa0013970 MtrunA17_Chr5g0420941 28.571 259 170 6 8 259 16 266 2.67e-27 113
Msa0013970 MtrunA17_Chr5g0420981 31.602 231 142 6 37 259 53 275 3.03e-27 113
Msa0013970 MtrunA17_Chr5g0421091 28.626 262 163 8 10 259 18 267 3.04e-27 113
Msa0013970 MtrunA17_Chr4g0064781 32.906 234 133 7 37 259 50 270 3.08e-27 113
Msa0013970 MtrunA17_Chr2g0289341 30.172 232 144 7 35 259 2 222 3.10e-27 112
Msa0013970 MtrunA17_Chr4g0045431 32.114 246 131 11 37 255 26 262 5.13e-27 112
Msa0013970 MtrunA17_Chr4g0068891 32.787 244 139 9 34 265 17 247 1.04e-26 111
Msa0013970 MtrunA17_Chr2g0319491 28.936 235 147 6 35 261 31 253 1.20e-26 111
Msa0013970 MtrunA17_Chr7g0247991 33.735 249 153 5 36 281 66 305 1.42e-26 112
Msa0013970 MtrunA17_Chr3g0121141 31.897 232 138 8 36 259 3 222 1.60e-26 110
Msa0013970 MtrunA17_Chr8g0365241 30.078 256 171 6 8 259 28 279 1.92e-26 111
Msa0013970 MtrunA17_Chr1g0167931 30.078 256 128 4 9 259 26 235 2.25e-26 110
Msa0013970 MtrunA17_Chr3g0114861 29.615 260 176 3 9 265 12 267 3.64e-26 110
Msa0013970 MtrunA17_Chr7g0235981 35.437 206 118 4 71 273 58 251 4.20e-26 109
Msa0013970 MtrunA17_Chr7g0219991 52.336 107 49 2 153 258 249 354 4.65e-26 110
Msa0013970 MtrunA17_Chr7g0219991 38.562 153 88 3 506 655 4 153 1.71e-22 99.8
Msa0013970 MtrunA17_Chr7g0219991 38.028 142 83 2 13 152 15 153 5.99e-22 97.8
Msa0013970 MtrunA17_Chr4g0045451 29.927 274 161 9 23 274 13 277 5.93e-26 109
Msa0013970 MtrunA17_Chr3g0087031 31.579 228 147 7 36 259 59 281 6.29e-26 109
Msa0013970 MtrunA17_Chr8g0375601 28.185 259 177 5 8 259 16 272 1.16e-25 109
Msa0013970 MtrunA17_Chr2g0314401 27.757 263 169 8 8 259 22 274 1.89e-25 108
Msa0013970 MtrunA17_Chr5g0439011 29.825 228 148 6 36 259 4 223 1.99e-25 107
Msa0013970 MtrunA17_Chr5g0423191 30.159 252 163 6 14 259 24 268 2.36e-25 108
Msa0013970 MtrunA17_Chr7g0239121 27.692 260 173 8 14 265 27 279 2.77e-25 107
Msa0013970 MtrunA17_Chr1g0170641 36.552 145 87 4 513 655 20 161 3.12e-25 102
Msa0013970 MtrunA17_Chr1g0170641 36.552 145 87 3 10 152 20 161 8.97e-25 101
Msa0013970 MtrunA17_Chr5g0420951 30.435 230 152 4 34 259 50 275 3.61e-25 107
Msa0013970 MtrunA17_Chr5g0421101 29.167 264 162 10 8 259 18 268 6.44e-25 106
Msa0013970 MtrunA17_Chr4g0045471 27.336 289 182 9 11 278 1 282 1.19e-24 105
Msa0013970 MtrunA17_Chr3g0145171 28.700 223 153 5 37 255 52 272 1.79e-24 105
Msa0013970 MtrunA17_Chr2g0314381 26.744 258 184 4 5 259 45 300 1.84e-24 105
Msa0013970 MtrunA17_Chr8g0364171 42.063 126 70 2 152 275 18 142 3.06e-24 99.0
Msa0013970 MtrunA17_Chr3g0092531 29.762 252 161 5 33 277 2 244 3.48e-24 103
Msa0013970 MtrunA17_Chr5g0421041 29.084 251 157 9 14 255 24 262 4.37e-24 104
Msa0013970 MtrunA17_Chr8g0336831 31.019 216 135 6 9 218 34 241 1.04e-23 100
Msa0013970 MtrunA17_Chr5g0420901 27.027 259 174 6 8 259 17 267 1.05e-23 103
Msa0013970 MtrunA17_Chr1g0191201 27.037 270 171 7 12 265 31 290 1.68e-23 102
Msa0013970 MtrunA17_Chr6g0474391 26.894 264 178 4 13 265 42 301 1.94e-23 102
Msa0013970 MtrunA17_Chr3g0093761 27.515 338 222 10 10 340 25 346 2.64e-23 102
Msa0013970 MtrunA17_Chr2g0332191 26.136 264 161 7 9 255 23 269 2.96e-23 102
Msa0013970 MtrunA17_Chr2g0314371 26.408 284 174 8 5 259 20 297 2.96e-23 101
Msa0013970 MtrunA17_Chr1g0148771 26.354 277 168 7 9 265 25 285 3.19e-23 102
Msa0013970 MtrunA17_Chr8g0370711 30.493 223 149 6 37 255 52 272 6.68e-23 100
Msa0013970 MtrunA17_Chr5g0423211 27.481 262 172 7 8 259 18 271 8.70e-23 100
Msa0013970 MtrunA17_Chr2g0285931 29.317 249 139 9 37 265 28 259 5.09e-22 97.8
Msa0013970 MtrunA17_Chr1g0204181 27.500 240 161 4 37 265 59 296 6.35e-22 98.2
Msa0013970 MtrunA17_Chr2g0314391 26.154 260 177 6 8 259 41 293 1.57e-21 97.1
Msa0013970 MtrunA17_Chr3g0093741 26.331 338 227 10 10 340 25 347 1.68e-21 96.7
Msa0013970 MtrunA17_Chr3g0093751 26.036 338 228 10 10 340 25 347 1.73e-21 96.7
Msa0013970 MtrunA17_Chr8g0375681 29.016 193 133 3 69 259 15 205 3.23e-21 94.7
Msa0013970 MtrunA17_Chr3g0145181 28.761 226 151 6 36 255 51 272 3.68e-21 95.5
Msa0013970 MtrunA17_Chr3g0125421 27.372 274 161 10 14 265 16 273 4.17e-21 95.5
Msa0013970 MtrunA17_Chr8g0370721 30.045 223 150 5 37 255 52 272 5.21e-21 95.1
Msa0013970 MtrunA17_Chr2g0313111 28.016 257 155 8 36 279 27 266 1.55e-20 93.2
Msa0013970 MtrunA17_Chr4g0045461 28.352 261 166 5 35 278 24 280 1.70e-20 94.0
Msa0013970 MtrunA17_Chr8g0351101 26.275 255 174 5 11 255 30 280 3.36e-20 93.2
Msa0013970 MtrunA17_Chr3g0130391 26.446 242 159 4 38 265 67 303 4.49e-20 92.8
Msa0013970 MtrunA17_Chr3g0145201 28.814 236 146 7 36 259 686 911 4.68e-20 95.1
Msa0013970 MtrunA17_Chr7g0265351 31.878 229 144 8 35 259 37 257 6.95e-20 91.7
Msa0013970 MtrunA17_Chr8g0358941 28.358 268 144 9 37 278 27 272 8.45e-20 91.3
Msa0013970 MtrunA17_Chr2g0319521 34.862 109 71 0 151 259 15 123 9.35e-20 86.3
Msa0013970 MtrunA17_Chr7g0239091 28.916 249 155 10 13 255 135 367 5.10e-19 90.5
Msa0013970 MtrunA17_Chr5g0394071 35.577 104 67 0 158 261 8 111 6.52e-19 85.1
Msa0013970 MtrunA17_Chr7g0239071 27.094 203 140 5 67 265 29 227 1.61e-18 87.0
Msa0013970 MtrunA17_Chr1g0194321 28.906 256 139 10 37 265 20 259 4.06e-18 86.3
Msa0013970 MtrunA17_Chr5g0420721 32.584 178 100 8 92 259 3 170 2.12e-17 82.8
Msa0013970 MtrunA17_Chr1g0167921 38.318 107 66 0 157 263 54 160 2.83e-16 77.0
Msa0013970 MtrunA17_Chr7g0233661 41.176 85 50 0 177 261 1 85 4.43e-16 76.3
Msa0013970 MtrunA17_Chr8g0384461 24.125 257 170 7 14 255 26 272 3.35e-15 77.8
Msa0013970 MtrunA17_Chr7g0247741 28.390 236 154 7 37 265 11 238 3.53e-15 77.0
Msa0013970 MtrunA17_Chr3g0126761 37.931 116 70 1 152 265 44 159 3.81e-15 75.5
Msa0013970 MtrunA17_Chr8g0348951 27.848 237 155 8 37 265 10 238 3.83e-15 77.0
Msa0013970 MtrunA17_Chr4g0053251 27.823 248 155 7 36 261 7 252 3.84e-15 77.0
Msa0013970 MtrunA17_Chr8g0375581 50.000 62 30 1 195 255 23 84 7.40e-15 70.5
Msa0013970 MtrunA17_Chr8g0336871 37.778 90 56 0 165 254 3 92 1.05e-14 72.8
Msa0013970 MtrunA17_Chr6g0488511 25.439 228 152 7 36 255 2 219 8.83e-14 72.8
Msa0013970 MtrunA17_Chr4g0004071 25.397 252 171 5 35 277 7 250 1.31e-13 72.4
Msa0013970 MtrunA17_Chr2g0311611 45.714 70 31 1 197 259 1 70 1.42e-13 66.2
Msa0013970 MtrunA17_Chr3g0105281 25.200 250 158 8 37 274 34 266 1.45e-13 72.4
Msa0013970 MtrunA17_Chr1g0158021 27.004 237 140 9 31 252 43 261 1.81e-13 71.2
Msa0013970 MtrunA17_Chr8g0389941 26.007 273 175 9 30 277 20 290 2.17e-13 72.0
Msa0013970 MtrunA17_Chr4g0037611 31.313 99 67 1 164 261 3 101 1.66e-12 66.6
Msa0013970 MtrunA17_Chr8g0384481 22.709 251 182 5 13 255 37 283 1.82e-12 69.3
Msa0013970 MtrunA17_Chr4g0055911 25.969 258 168 8 36 277 8 258 1.97e-12 68.9
Msa0013970 MtrunA17_Chr7g0235991 30.612 147 94 4 37 180 21 162 2.12e-12 66.6
Msa0013970 MtrunA17_Chr4g0064771 35.938 128 70 3 134 259 18 135 2.54e-12 66.6
Msa0013970 MtrunA17_Chr8g0336801 39.744 78 47 0 188 265 2 79 3.19e-12 65.1
Msa0013970 MtrunA17_Chr1g0170631 31.737 167 92 8 152 314 3 151 3.68e-12 65.9
Msa0013970 MtrunA17_Chr4g0075471 49.180 61 30 1 196 255 28 88 4.50e-12 64.7
Msa0013970 MtrunA17_Chr3g0092571 42.466 73 38 1 37 105 6 78 1.01e-11 62.8
Msa0013970 MtrunA17_Chr5g0420881 42.188 64 36 1 197 259 1 64 1.10e-11 63.2
Msa0013970 MtrunA17_Chr6g0486831 27.068 266 161 10 39 277 20 279 2.77e-11 65.5
Msa0013970 MtrunA17_Chr8g0364161 38.144 97 57 2 539 633 66 161 7.19e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0013970 AT5G24530.1 41.538 260 147 3 3 261 4 259 1.31e-56 196
Msa0013970 AT5G24530.1 36.667 150 91 2 506 655 4 149 3.75e-21 95.9
Msa0013970 AT4G10500.1 36.576 257 161 2 4 259 10 265 1.83e-53 187
Msa0013970 AT4G10500.1 31.333 150 101 2 507 655 10 158 2.13e-18 87.8
Msa0013970 AT4G10490.1 36.905 252 157 2 9 259 13 263 2.01e-51 182
Msa0013970 AT4G10490.1 32.414 145 96 2 512 655 13 156 1.96e-18 87.8
Msa0013970 AT2G36690.2 33.333 294 184 6 9 294 27 316 1.20e-42 158
Msa0013970 AT2G36690.2 30.667 150 97 3 512 655 27 175 3.09e-15 78.2
Msa0013970 AT2G36690.1 33.333 294 184 6 9 294 27 316 1.20e-42 158
Msa0013970 AT2G36690.1 30.667 150 97 3 512 655 27 175 3.09e-15 78.2
Msa0013970 AT5G07480.1 33.333 255 156 6 10 255 20 269 1.39e-41 155
Msa0013970 AT5G07480.1 35.172 145 88 3 513 655 20 160 2.62e-23 102
Msa0013970 AT2G44800.1 34.661 251 158 5 9 255 22 270 2.05e-41 154
Msa0013970 AT2G44800.1 36.054 147 90 3 512 655 22 167 4.67e-22 99.0
Msa0013970 AT1G06620.2 35.496 262 148 7 9 260 33 283 4.11e-40 149
Msa0013970 AT1G06620.1 35.294 289 161 9 9 286 33 306 2.97e-39 149
Msa0013970 AT5G43440.2 32.601 273 168 5 1 260 14 283 3.26e-39 146
Msa0013970 AT5G43440.1 30.836 347 218 8 1 333 14 352 1.96e-38 146
Msa0013970 AT1G03410.2 32.979 282 181 4 9 285 26 304 2.49e-38 146
Msa0013970 AT3G60290.1 35.366 246 153 5 14 255 27 270 3.16e-38 145
Msa0013970 AT3G60290.1 34.247 146 84 4 517 655 27 167 5.52e-19 89.7
Msa0013970 AT1G03410.1 32.979 282 181 4 9 285 63 341 5.13e-38 146
Msa0013970 AT5G43450.2 33.692 279 154 7 1 260 14 280 1.99e-37 141
Msa0013970 AT2G30830.1 35.743 249 149 4 37 282 54 294 4.04e-37 142
Msa0013970 AT5G43450.1 33.788 293 159 8 1 274 14 290 9.96e-37 141
Msa0013970 AT5G59530.1 34.375 288 167 8 9 286 30 305 8.02e-36 139
Msa0013970 AT1G06645.1 36.797 231 130 5 35 259 75 295 8.89e-36 139
Msa0013970 AT1G06650.1 35.088 228 141 3 35 259 62 285 1.84e-35 136
Msa0013970 AT5G08640.2 30.672 238 149 4 36 265 42 271 4.45e-35 136
Msa0013970 AT5G08640.1 30.672 238 149 4 36 265 42 271 4.45e-35 136
Msa0013970 AT1G55290.1 32.482 274 174 5 9 277 32 299 4.97e-35 136
Msa0013970 AT1G55290.1 31.818 154 99 3 498 649 19 168 2.44e-13 72.4
Msa0013970 AT3G13610.1 31.273 275 179 5 9 279 33 301 5.37e-35 136
Msa0013970 AT3G13610.1 30.323 155 103 3 496 649 18 168 7.21e-13 70.9
Msa0013970 AT1G06650.2 35.526 228 140 3 35 259 62 285 5.66e-35 136
Msa0013970 AT5G63580.1 35.841 226 137 4 33 255 15 235 8.42e-35 132
Msa0013970 AT5G63580.1 33.058 121 75 3 536 655 15 130 2.71e-11 64.7
Msa0013970 AT5G63580.2 35.841 226 137 4 33 255 15 235 8.78e-35 132
Msa0013970 AT5G63580.2 33.058 121 75 3 536 655 15 130 2.33e-11 64.7
Msa0013970 AT3G61400.2 34.470 264 153 8 9 259 31 287 9.27e-35 134
Msa0013970 AT1G06640.2 36.522 230 137 4 35 260 62 286 1.34e-34 134
Msa0013970 AT1G06640.1 36.066 244 143 5 35 274 62 296 1.72e-34 135
Msa0013970 AT3G61400.1 34.470 264 153 8 9 259 31 287 3.45e-34 134
Msa0013970 AT1G06640.3 36.444 225 134 4 35 255 62 281 4.89e-34 132
Msa0013970 AT2G30840.1 33.858 254 150 5 36 282 56 298 7.91e-34 133
Msa0013970 AT1G03400.1 32.669 251 159 4 36 286 55 295 9.64e-34 132
Msa0013970 AT3G11180.1 32.463 268 165 8 9 265 62 324 1.13e-33 133
Msa0013970 AT3G55970.1 32.727 275 158 9 9 264 20 286 1.16e-33 132
Msa0013970 AT3G55970.1 35.659 129 70 4 512 631 20 144 6.05e-12 68.2
Msa0013970 AT3G55970.2 33.456 272 154 10 7 259 18 281 1.44e-33 130
Msa0013970 AT3G55970.2 33.121 157 89 6 510 655 18 169 3.14e-12 68.6
Msa0013970 AT3G19000.2 31.636 275 145 9 16 259 6 268 1.57e-33 130
Msa0013970 AT5G63590.1 33.632 223 140 5 37 255 14 232 1.68e-33 130
Msa0013970 AT3G11180.2 32.463 268 165 8 9 265 62 324 1.76e-33 133
Msa0013970 AT5G59540.2 34.498 229 138 4 37 259 61 283 2.27e-33 130
Msa0013970 AT5G59540.1 34.241 257 152 6 37 286 61 307 2.66e-33 132
Msa0013970 AT2G30840.2 34.483 232 138 4 36 260 56 280 2.93e-33 130
Msa0013970 AT2G30840.3 34.632 231 137 4 36 259 56 279 3.14e-33 131
Msa0013970 AT1G03400.2 35.268 224 135 4 36 259 55 268 6.10e-33 131
Msa0013970 AT3G19000.1 31.502 273 148 9 16 259 6 268 9.68e-33 130
Msa0013970 AT1G77330.1 31.381 239 146 5 36 265 2 231 1.17e-32 128
Msa0013970 AT5G05600.2 33.333 264 156 8 9 259 33 289 2.09e-32 127
Msa0013970 AT3G21420.1 33.473 239 151 5 33 265 51 287 4.33e-32 128
Msa0013970 AT5G05600.1 33.086 269 160 8 9 264 33 294 4.97e-32 128
Msa0013970 AT5G63595.1 31.535 241 141 5 30 269 18 235 3.27e-31 123
Msa0013970 AT3G51240.1 29.078 282 190 6 18 293 19 296 3.60e-31 125
Msa0013970 AT1G05010.1 29.297 256 169 6 35 286 2 249 1.18e-30 123
Msa0013970 AT1G17020.1 28.571 280 184 8 10 281 25 296 1.33e-30 124
Msa0013970 AT1G04380.2 31.801 261 160 6 6 259 13 262 1.40e-30 121
Msa0013970 AT5G63600.1 30.992 242 155 4 37 275 33 265 1.99e-30 122
Msa0013970 AT3G12900.1 29.066 289 196 5 9 295 28 309 3.03e-30 122
Msa0013970 AT1G04380.1 31.834 289 174 8 6 286 13 286 6.68e-30 121
Msa0013970 AT3G19010.1 31.641 256 161 4 18 259 8 263 6.79e-30 121
Msa0013970 AT3G19010.4 31.641 256 161 4 18 259 8 263 6.79e-30 121
Msa0013970 AT2G38240.1 29.091 275 154 9 7 259 16 271 7.24e-30 121
Msa0013970 AT1G04350.1 30.742 283 176 6 9 284 28 297 1.03e-29 121
Msa0013970 AT3G19010.2 31.641 256 161 4 18 259 8 263 1.06e-29 119
Msa0013970 AT5G63600.2 31.982 222 139 4 37 255 33 245 1.10e-29 120
Msa0013970 AT4G16330.2 33.036 224 141 4 36 255 66 284 1.92e-29 120
Msa0013970 AT1G12010.1 30.901 233 149 6 31 259 1 225 2.82e-29 119
Msa0013970 AT4G22880.1 27.170 265 180 5 8 259 12 276 3.04e-29 120
Msa0013970 AT4G22880.2 27.170 265 180 5 8 259 12 276 3.04e-29 120
Msa0013970 AT4G22880.3 27.170 265 180 5 8 259 12 276 3.04e-29 120
Msa0013970 AT2G25450.1 30.040 253 169 4 37 286 55 302 6.40e-29 119
Msa0013970 AT5G12270.1 29.502 261 174 5 10 265 29 284 1.23e-28 118
Msa0013970 AT5G12270.1 24.848 165 120 2 485 648 1 162 3.87e-11 65.9
Msa0013970 AT4G21200.1 28.270 237 141 5 37 261 42 261 2.43e-28 117
Msa0013970 AT1G62380.1 32.189 233 140 8 34 259 4 225 4.20e-28 115
Msa0013970 AT1G15550.1 27.715 267 163 6 5 255 21 273 1.08e-27 115
Msa0013970 AT4G25310.1 31.197 234 143 8 54 281 70 291 1.65e-27 114
Msa0013970 AT1G17010.1 29.258 229 152 6 37 259 54 278 2.01e-27 114
Msa0013970 AT4G25300.1 28.516 256 169 7 32 281 47 294 6.31e-27 113
Msa0013970 AT5G51810.2 29.084 251 162 6 14 255 42 285 1.64e-25 107
Msa0013970 AT1G60980.1 27.099 262 173 5 14 261 36 293 1.99e-25 108
Msa0013970 AT5G51810.1 29.084 251 162 6 14 255 42 285 6.06e-25 107
Msa0013970 AT5G07480.2 35.099 151 90 3 112 255 11 160 7.59e-25 104
Msa0013970 AT4G16330.1 39.706 136 81 1 121 255 43 178 1.59e-24 103
Msa0013970 AT5G54000.2 28.794 257 168 8 14 259 19 271 1.77e-24 105
Msa0013970 AT1G80330.1 29.520 271 165 10 2 255 7 268 2.30e-24 105
Msa0013970 AT5G20400.1 29.020 255 165 8 12 255 17 266 5.17e-24 104
Msa0013970 AT5G07200.1 26.493 268 173 5 14 265 37 296 6.68e-24 104
Msa0013970 AT1G78550.1 26.749 243 161 7 32 265 48 282 1.24e-23 103
Msa0013970 AT1G47990.1 29.688 256 139 8 31 265 9 244 1.73e-23 102
Msa0013970 AT1G80340.1 27.237 257 173 5 5 255 18 266 2.34e-23 102
Msa0013970 AT4G25420.1 25.468 267 177 5 13 265 39 297 5.08e-23 102
Msa0013970 AT4G25420.2 26.070 257 168 5 13 255 39 287 5.19e-23 100
Msa0013970 AT3G19010.3 28.906 256 138 5 18 259 8 233 5.31e-23 100
Msa0013970 AT1G78440.1 29.084 251 136 9 37 265 18 248 9.98e-22 97.4
Msa0013970 AT1G49390.1 27.668 253 171 7 12 255 17 266 1.27e-21 97.4
Msa0013970 AT1G30040.1 27.888 251 148 8 31 265 25 258 1.46e-21 97.1
Msa0013970 AT1G30040.2 28.163 245 143 8 31 259 25 252 1.78e-21 95.1
Msa0013970 AT3G51240.2 31.073 177 116 4 121 293 38 212 2.83e-21 94.7
Msa0013970 AT5G20550.1 27.953 254 170 9 12 255 17 267 1.58e-20 94.0
Msa0013970 AT5G54000.1 29.534 193 131 4 70 259 1 191 3.04e-20 91.7
Msa0013970 AT1G50960.1 26.582 237 148 6 37 261 40 262 1.13e-19 91.3
Msa0013970 AT5G43935.1 28.696 230 131 8 33 255 15 218 1.53e-19 90.1
Msa0013970 AT1G02400.1 29.388 245 143 8 37 265 24 254 2.06e-19 90.5
Msa0013970 AT1G78550.2 26.923 208 136 6 66 265 5 204 4.39e-19 88.6
Msa0013970 AT1G02400.2 29.832 238 137 8 38 259 25 248 9.87e-19 87.0
Msa0013970 AT4G21690.1 26.792 265 158 11 9 255 24 270 3.73e-17 84.0
Msa0013970 AT1G49390.2 28.042 189 131 4 70 255 1 187 3.75e-17 82.4
Msa0013970 AT1G44090.1 26.293 232 153 6 37 255 63 289 8.73e-16 80.1
Msa0013970 AT3G50210.4 27.490 251 156 7 35 259 6 256 1.32e-15 79.0
Msa0013970 AT3G50210.1 27.490 251 156 7 35 259 6 256 1.32e-15 79.0
Msa0013970 AT3G50210.3 27.490 251 156 7 35 259 6 256 1.32e-15 79.0
Msa0013970 AT4G25310.2 27.232 224 125 7 60 281 76 263 4.19e-15 77.4
Msa0013970 AT2G19590.1 23.849 239 157 8 37 265 11 234 1.66e-13 72.4
Msa0013970 AT4G25300.2 30.370 135 84 4 151 281 72 200 8.04e-13 69.7
Msa0013970 AT4G23340.1 27.801 241 149 10 37 265 10 237 8.78e-13 70.5

Find 174 sgRNAs with CRISPR-Local

Find 937 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTCCCTGGTCTTGTTTC+TGG 0.072157 1_1:+21830888 None:intergenic
AAATGCCCTGGTCTTGTTTC+TGG 0.074453 1_1:+21844090 None:intergenic
TGAGGAGTTTGGATTCTTTC+AGG 0.155309 1_1:-21830769 Msa0013970:intron
TGAGGAGTTTGGATTCTTTC+AGG 0.155309 1_1:-21843971 Msa0013970:intron
TCGTCTACTCATTCTTAAAA+TGG 0.171724 1_1:+21837232 None:intergenic
GTCTCTTGTACTACAGTTTC+AGG 0.188303 1_1:+21837419 None:intergenic
CCAGGGTCCTTCTTCTTTAG+AGG 0.236802 1_1:+21837077 None:intergenic
GCTTCACTAAGATCAATTAT+TGG 0.244375 1_1:+21830840 None:intergenic
GCTTCACTAAGATCAATTAT+TGG 0.244375 1_1:+21844042 None:intergenic
TATTCTGCTTCTCTTTGAAC+TGG 0.252237 1_1:+21837288 None:intergenic
CGACAATAGGCTCGAATATT+GGG 0.256389 1_1:+21837264 None:intergenic
CTGTATGTAGTTGGATATTC+AGG 0.259306 1_1:+21830376 None:intergenic
CTGTATGTAGTTGGATATTC+AGG 0.259306 1_1:+21842047 None:intergenic
TCGACAATAGGCTCGAATAT+TGG 0.264387 1_1:+21837263 None:intergenic
CCTGGAAGTTTCAATTCTAT+TGG 0.265645 1_1:-21837059 Msa0013970:CDS
GATCTTAGTGAAGCACAAAA+TGG 0.276737 1_1:-21844033 Msa0013970:CDS
CATCTTTCTACTTGGACAAT+AGG 0.278089 1_1:-21837485 Msa0013970:CDS
AAATATTTCCTTACAGCTTC+CGG 0.282779 1_1:+21837112 None:intergenic
GGATTATTCAACTAAAATTA+AGG 0.288981 1_1:-21840304 Msa0013970:CDS
CCAATAGAATTGAAACTTCC+AGG 0.290689 1_1:+21837059 None:intergenic
CTCATATTCATCTTTCTACT+TGG 0.307026 1_1:-21837493 Msa0013970:CDS
AGGACAAGAGCAGGATAAAA+TGG 0.310087 1_1:-21837465 Msa0013970:CDS
GATAATTTGTTGAATTGATT+TGG 0.316701 1_1:+21844002 None:intergenic
CTTCACTAAGATCAATTATT+GGG 0.330210 1_1:+21830841 None:intergenic
CTTCACTAAGATCAATTATT+GGG 0.330210 1_1:+21844043 None:intergenic
ATCAAGGCTGCTGAGGAGTT+TGG 0.334114 1_1:-21830780 Msa0013970:CDS
ATCAAGGCTGCTGAGGAGTT+TGG 0.334114 1_1:-21843982 Msa0013970:CDS
AAGCTACTTCAAAGGGGATA+TGG 0.340676 1_1:-21844172 None:intergenic
TTTCTTGCAGAGAGTGTGTT+GGG 0.344937 1_1:-21840326 Msa0013970:intron
CAAGGTACTTCAAGGGGATA+TGG 0.347209 1_1:-21830970 Msa0013970:intron
CAACATAGGCTACGCCTTGC+AGG 0.351085 1_1:-21840016 Msa0013970:intron
TGATAATCTTAGTGATTCAT+TGG 0.355186 1_1:-21840214 Msa0013970:CDS
GTTTCAGGGGAGGATTTGTT+CGG 0.355873 1_1:+21837434 None:intergenic
CTTATCAGATTCATATTTCA+AGG 0.367343 1_1:+21830465 None:intergenic
TTAAAATAGGTTATCAATCA+TGG 0.368102 1_1:-21842284 Msa0013970:intron
GATTAGTGAAGGGCTGGGTT+TGG 0.370028 1_1:-21840256 Msa0013970:CDS
CTGGAAGTTTCAATTCTATT+GGG 0.372670 1_1:-21837058 Msa0013970:CDS
GATCTTAGTGAAGCACAAAA+TGG 0.374761 1_1:-21830831 Msa0013970:CDS
TGCATTTACCTGTATGTAGT+TGG 0.379824 1_1:+21830367 None:intergenic
TGCATTTACCTGTATGTAGT+TGG 0.379824 1_1:+21842038 None:intergenic
TTTAAATAGGTTATCAATCA+TGG 0.382389 1_1:-21830613 Msa0013970:intron
TTCAACTAAAATTAAGGAGT+TGG 0.386348 1_1:-21840298 Msa0013970:CDS
TAGACACCCAGCTTATCCTT+TGG 0.389627 1_1:-21830419 Msa0013970:CDS
TAGACACCCAGCTTATCCTT+TGG 0.389627 1_1:-21842090 Msa0013970:CDS
TCAACTAAAATTAAGGAGTT+GGG 0.390526 1_1:-21840297 Msa0013970:CDS
AAGTCGTGCTTGTATTCATT+AGG 0.392651 1_1:+21842203 None:intergenic
ATTGTTAGATTGACAGTTGA+TGG 0.394746 1_1:+21836939 None:intergenic
CACTGCTCCAAAGGATAAGC+TGG 0.401380 1_1:+21830412 None:intergenic
CACTCCTCCAAAGGATAAGC+TGG 0.401380 1_1:+21842083 None:intergenic
TTCCCTGGTCTTGTTTCTGG+TGG 0.413720 1_1:+21830891 None:intergenic
AAGTCGTGCTTGTACTCATT+AGG 0.414987 1_1:+21830532 None:intergenic
ACGTCGTTCACCACTCCATC+TGG 0.417133 1_1:+21836894 None:intergenic
GAAAGATGAATATGAGGTAG+AGG 0.419123 1_1:+21837500 None:intergenic
AATTTGATAAGGTTCATCTA+TGG 0.419802 1_1:-21842124 Msa0013970:CDS
ATGTGGGCTTCAAGTACTTA+AGG 0.423375 1_1:-21840085 Msa0013970:CDS
TTTCAGGGGAGGATTTGTTC+GGG 0.423682 1_1:+21837435 None:intergenic
CCAAGTGTTAAACTTGGATC+AGG 0.424049 1_1:+21840162 None:intergenic
ATCTTAGTGAAGCACAAAAT+GGG 0.425621 1_1:-21844032 Msa0013970:CDS
AGAGAAGCTCAGTGTGGTTT+AGG 0.427148 1_1:-21837023 Msa0013970:CDS
GAGGTAAGCATCAAAGTGTT+TGG 0.427989 1_1:+21840134 None:intergenic
TGCCCTGGTCTTGTTTCTGG+TGG 0.431944 1_1:+21844093 None:intergenic
TTTCAAATATGAATTTGATA+AGG 0.432349 1_1:-21842135 Msa0013970:CDS
AGATTCATATTTCAAGGTGC+TGG 0.433402 1_1:+21830471 None:intergenic
TACGACAACTTGCTAAAGTT+AGG 0.437811 1_1:+21837173 None:intergenic
ATGGAATCTTTGTCGACAAT+AGG 0.440768 1_1:+21837251 None:intergenic
AATCTGATAAGGTTCATCTA+TGG 0.444168 1_1:-21830453 Msa0013970:CDS
CATGCATTTGTTATCAACAT+AGG 0.450686 1_1:-21840030 Msa0013970:CDS
TGGAGAAATTTATTTCAAAC+CGG 0.451168 1_1:-21844152 Msa0013970:CDS
TGGAGAAATTTGTTTCAAAC+CGG 0.452993 1_1:-21830950 Msa0013970:CDS
CTGCATTGTAGAGTCCTTTG+AGG 0.453232 1_1:-21837612 Msa0013970:intron
TATATCTTCTTGTTGTAAAA+CGG 0.454560 1_1:+21840107 None:intergenic
GAATTTGATTAGTGAAGGGC+TGG 0.458682 1_1:-21840262 Msa0013970:CDS
CATGTCTTCAAAATGTCATC+AGG 0.461397 1_1:+21830505 None:intergenic
TCAAGCATCAAATCTGTGCC+TGG 0.461611 1_1:-21830927 Msa0013970:CDS
AGCATAATCAAGGTACTTCA+AGG 0.467074 1_1:-21830978 Msa0013970:intron
AAATTAAGGAGTTGGGTTCA+AGG 0.470502 1_1:-21840290 Msa0013970:CDS
TCCCTGGTCTTGTTTCTGGT+GGG 0.472772 1_1:+21830892 None:intergenic
CATGTCTTCAAATTGTCCTC+AGG 0.473136 1_1:+21842176 None:intergenic
GATAATTTGTTGAATTGTGT+TGG 0.477895 1_1:+21830800 None:intergenic
TGGAGCAGTGGCAACACTTG+TGG 0.485924 1_1:-21830399 Msa0013970:CDS
CTTGAAATATGAATCTGATA+AGG 0.489068 1_1:-21830464 Msa0013970:CDS
ATTCTGCTTCTCTTTGAACT+GGG 0.490456 1_1:+21837289 None:intergenic
ACACCCAGCTTATCCTTTGG+AGG 0.493925 1_1:-21842087 Msa0013970:CDS
TGGAGGAGTGGCAACACTTG+TGG 0.495451 1_1:-21842070 Msa0013970:CDS
ATCAATTCAACAAATTATCA+AGG 0.497300 1_1:-21843998 Msa0013970:CDS
GCACAGATTTGATGCTTGAC+CGG 0.497913 1_1:+21830931 None:intergenic
GCACAGATTTGATGCTTGAC+CGG 0.497913 1_1:+21844133 None:intergenic
GAAGGGCTGGGTTTGGAGTG+TGG 0.498754 1_1:-21840249 Msa0013970:CDS
TCTCTTGTACTACAGTTTCA+GGG 0.503255 1_1:+21837420 None:intergenic
GTTATACCAAGTGTTAAACT+TGG 0.503712 1_1:+21840156 None:intergenic
CCTGATCCAAGTTTAACACT+TGG 0.505148 1_1:-21840162 Msa0013970:CDS
ATCATGAATTTGATTAGTGA+AGG 0.507284 1_1:-21840267 Msa0013970:CDS
TGCATTGTAGAGTCCTTTGA+GGG 0.510163 1_1:-21837611 Msa0013970:intron
ACTAAGATCAATTATTGGGA+TGG 0.512445 1_1:+21830845 None:intergenic
ACTAAGATCAATTATTGGGA+TGG 0.512445 1_1:+21844047 None:intergenic
CTGAATATCCAACTACATAC+AGG 0.512878 1_1:-21830375 Msa0013970:CDS
CTGAATATCCAACTACATAC+AGG 0.512878 1_1:-21842046 Msa0013970:intron
CAAGCATCAAATCTGTGCCT+GGG 0.518624 1_1:-21830926 Msa0013970:CDS
ACGACAACTTGCTAAAGTTA+GGG 0.519924 1_1:+21837174 None:intergenic
TAAGATGAGTTTCCGACAAG+TGG 0.520198 1_1:+21837351 None:intergenic
TAATTAAATAGTTGACATAA+CGG 0.521740 1_1:-21830198 Msa0013970:three_prime_UTR
CAGCTTATCCTTTGGAGCAG+TGG 0.524801 1_1:-21830411 Msa0013970:CDS
GCCCTGGTCTTGTTTCTGGT+GGG 0.525785 1_1:+21844094 None:intergenic
GTCGGAAACTCATCTTAAGA+AGG 0.527529 1_1:-21837345 Msa0013970:CDS
TCTCTCGTTGGATGAAATGA+AGG 0.527801 1_1:-21830590 Msa0013970:CDS
TCTCTCGTTGGATGAAATGA+AGG 0.527801 1_1:-21842261 Msa0013970:CDS
CACAATTCAACAAATTATCA+AGG 0.528014 1_1:-21830796 Msa0013970:CDS
TAAAGTTAGGGAGTCTGTAA+AGG 0.528134 1_1:+21837186 None:intergenic
GCATAATCAAGGTACTTCAA+GGG 0.531796 1_1:-21830977 Msa0013970:intron
CAGCTTATCCTTTGGAGGAG+TGG 0.534384 1_1:-21842082 Msa0013970:CDS
AGCTGTAAGGAAATATTTCA+AGG 0.535351 1_1:-21837107 Msa0013970:CDS
CTGATAAGGTTCATCTATGG+AGG 0.541613 1_1:-21830450 Msa0013970:CDS
TTGATAAGGTTCATCTATGG+AGG 0.541951 1_1:-21842121 Msa0013970:CDS
CAAGTAGAAAGATGAATATG+AGG 0.543304 1_1:+21837494 None:intergenic
TTACAACAAGAAGATATATG+TGG 0.543713 1_1:-21840102 Msa0013970:CDS
ATTTGTACTGAAATCAAGAA+AGG 0.547738 1_1:-21837386 Msa0013970:CDS
AGCTTCCGGAAAATGCAGTC+AGG 0.551329 1_1:+21837126 None:intergenic
AAGTGTTGCCACTGCTCCAA+AGG 0.551591 1_1:+21830403 None:intergenic
GTTCTGACGGCTACCCTCAA+AGG 0.552060 1_1:+21837598 None:intergenic
ATGGTGGATAATGATTAAGT+TGG 0.554668 1_1:+21840187 None:intergenic
TACAACAAGAAGATATATGT+GGG 0.557261 1_1:-21840101 Msa0013970:CDS
GGTGGGAATACATAGTCCTC+AGG 0.561221 1_1:+21844111 None:intergenic
TCATTAAGTGTTAAGTCAAG+CGG 0.566792 1_1:-21837569 Msa0013970:CDS
TTGGACAATAGGACAAGAGC+AGG 0.570766 1_1:-21837474 Msa0013970:CDS
TTCCCACCAGAAACAAGACC+AGG 0.575281 1_1:-21830894 Msa0013970:CDS
TTCCCACCAGAAACAAGACC+AGG 0.575281 1_1:-21844096 Msa0013970:CDS
CAAGCGGACTCAATGAAAGC+GGG 0.579665 1_1:-21837553 Msa0013970:CDS
GTAAGGAAATATTTCAAGGA+CGG 0.579712 1_1:-21837103 Msa0013970:CDS
ACTGTAGTACAAGAGACTGT+TGG 0.579765 1_1:-21837413 Msa0013970:CDS
ACGGTTACCTCTAAAGAAGA+AGG 0.579940 1_1:-21837084 Msa0013970:CDS
AAAGATGAATATGAGGTAGA+GGG 0.580919 1_1:+21837501 None:intergenic
TATCAATCATGGTCTCTCGT+TGG 0.580958 1_1:-21830602 Msa0013970:CDS
TATCAATCATGGTCTCTCGT+TGG 0.580958 1_1:-21842273 Msa0013970:CDS
CATAATCAAGGTACTTCAAG+GGG 0.586958 1_1:-21830976 Msa0013970:intron
GTCAATCTAACAATTGCAGA+AGG 0.589841 1_1:-21836930 Msa0013970:CDS
TTCTTGCAGAGAGTGTGTTG+GGG 0.591810 1_1:-21840325 Msa0013970:intron
CTCTTGTACTACAGTTTCAG+GGG 0.594430 1_1:+21837421 None:intergenic
AAGTGTTGCCACTCCTCCAA+AGG 0.599273 1_1:+21842074 None:intergenic
TCATGAATTTGATTAGTGAA+GGG 0.599334 1_1:-21840266 Msa0013970:CDS
TTGTACTACAGTTTCAGGGG+AGG 0.600560 1_1:+21837424 None:intergenic
GCTCAGTGTGGTTTAGGCGA+AGG 0.602165 1_1:-21837017 Msa0013970:CDS
CCTCTAAAGAAGAAGGACCC+TGG 0.603460 1_1:-21837077 Msa0013970:CDS
TGATAAGGTTCATCTATGGA+GGG 0.603485 1_1:-21842120 Msa0013970:CDS
TTAATGAAGTGTCGTTCTGA+CGG 0.605557 1_1:+21837585 None:intergenic
AGAACAATGTGACCACTTGT+CGG 0.605798 1_1:-21837363 Msa0013970:CDS
GGTGGGAATACATAGTCCCC+AGG 0.606174 1_1:+21830909 None:intergenic
CTTAAGAAGGAAGAAGCGCT+AGG 0.606388 1_1:-21837332 Msa0013970:CDS
CAATAGAATTGAAACTTCCA+GGG 0.607209 1_1:+21837060 None:intergenic
CTTGTTGTAAAACGGTGATG+AGG 0.608895 1_1:+21840115 None:intergenic
ACAAATTATCAAGGCTGCTG+AGG 0.609624 1_1:-21830787 Msa0013970:CDS
ACAAATTATCAAGGCTGCTG+AGG 0.609624 1_1:-21843989 Msa0013970:CDS
AAGCATCAAATCTGTGCCTG+AGG 0.610221 1_1:-21844127 Msa0013970:CDS
GGGCTTCAAGTACTTAAGGA+TGG 0.612431 1_1:-21840081 Msa0013970:CDS
AATTTGATTAGTGAAGGGCT+GGG 0.612586 1_1:-21840261 Msa0013970:CDS
TTCAGGGGAGGATTTGTTCG+GGG 0.614324 1_1:+21837436 None:intergenic
ACCACACTGAGCTTCTCTCA+CGG 0.614880 1_1:+21837028 None:intergenic
TGATAAGGTTCATCTATGGA+GGG 0.616990 1_1:-21830449 Msa0013970:CDS
AAGCATCAAATCTGTGCCTG+GGG 0.617489 1_1:-21830925 Msa0013970:CDS
GTTAAACTTGGATCAGGGCA+TGG 0.619060 1_1:+21840168 None:intergenic
ACTCCTCCAAAGGATAAGCT+GGG 0.619245 1_1:+21842084 None:intergenic
ACTGCTCCAAAGGATAAGCT+GGG 0.625760 1_1:+21830413 None:intergenic
AAGTACTTAAGGATGGAGAG+TGG 0.626132 1_1:-21840074 Msa0013970:CDS
GACAATAGGCTCGAATATTG+GGG 0.631791 1_1:+21837265 None:intergenic
ATGCATTAAGTGTACCTGCA+AGG 0.639467 1_1:+21840002 None:intergenic
TCTTAGTGAAGCACAAAATG+GGG 0.639942 1_1:-21844031 Msa0013970:CDS
CAAGTGTTAAACTTGGATCA+GGG 0.643607 1_1:+21840163 None:intergenic
TCAAGCGGACTCAATGAAAG+CGG 0.646813 1_1:-21837554 Msa0013970:CDS
GCATGAACTTGACTCCAACA+TGG 0.654763 1_1:-21836995 Msa0013970:CDS
ATGTTGATAACAAATGCATG+AGG 0.686842 1_1:+21840033 None:intergenic
AAACTTGGATCAGGGCATGG+TGG 0.687333 1_1:+21840171 None:intergenic
CAAGCACGACTTGTATCCTG+AGG 0.716928 1_1:-21842192 Msa0013970:CDS
TCCCACCAGAAACAAGACCA+GGG 0.729981 1_1:-21830893 Msa0013970:CDS
TCCCACCAGAAACAAGACCA+GGG 0.729981 1_1:-21844095 Msa0013970:CDS
TCCGTGAGAGAAGCTCAGTG+TGG 0.733448 1_1:-21837029 Msa0013970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTATTAAAAT+AGG - chr1_1:21832049-21832068 Msa0013970:intron 0.0%
!! AAAAATATATATATATTTAT+TGG + chr1_1:21834002-21834021 None:intergenic 0.0%
!! TTATTATTATTATTATTATT+AGG + chr1_1:21843147-21843166 None:intergenic 0.0%
!! TTAAATTAAAACTAACAAAA+AGG + chr1_1:21830652-21830671 None:intergenic 10.0%
!!! AAAAAGTAAACATATTTTTA+AGG + chr1_1:21831811-21831830 None:intergenic 10.0%
!! GTTTATATATATTTATTAGT+TGG - chr1_1:21831846-21831865 Msa0013970:intron 10.0%
!! TTAATAAAAAAAAAAATGTC+GGG + chr1_1:21832046-21832065 None:intergenic 10.0%
!!! ATTTTCATTAAAAAATATGA+AGG - chr1_1:21833846-21833865 Msa0013970:intron 10.0%
!! ATATATATATATTTATTGGA+TGG + chr1_1:21833998-21834017 None:intergenic 10.0%
!!! TTTTAATTCTTTAAATTATG+TGG - chr1_1:21834386-21834405 Msa0013970:intron 10.0%
!! TTTAATTCTTTAAATTATGT+GGG - chr1_1:21834387-21834406 Msa0013970:intron 10.0%
!!! TATATTATCATCTTTTTTTA+GGG + chr1_1:21839309-21839328 None:intergenic 10.0%
!!! ATATACTAGTTATATATTTT+AGG - chr1_1:21839378-21839397 Msa0013970:intron 10.0%
!!! ATTTATATAATTGAAAGTTT+TGG - chr1_1:21839631-21839650 Msa0013970:intron 10.0%
!! AAAATTATTAGAGAATTTAT+AGG - chr1_1:21839673-21839692 Msa0013970:intron 10.0%
!! AATTTACTTAATTTATTATC+CGG + chr1_1:21839965-21839984 None:intergenic 10.0%
!! CAAAAAATAAATTAAAAACA+GGG + chr1_1:21841008-21841027 None:intergenic 10.0%
!! ACAAAAAATAAATTAAAAAC+AGG + chr1_1:21841009-21841028 None:intergenic 10.0%
!!! ATGAATTTTTATATTTTTGA+CGG + chr1_1:21841136-21841155 None:intergenic 10.0%
!! TAAAGAATAAAAAGAATTAA+TGG + chr1_1:21842020-21842039 None:intergenic 10.0%
!!! ATCTCATATTTTTTTATTTA+TGG + chr1_1:21842223-21842242 None:intergenic 10.0%
!!! TTTTATTGAATTATCATTTT+AGG - chr1_1:21842506-21842525 Msa0013970:intron 10.0%
!! AATTTAATTAAGGAAAATTT+AGG - chr1_1:21842645-21842664 Msa0013970:intron 10.0%
!! TATTTAAATCAAAGAAATTT+CGG + chr1_1:21843721-21843740 None:intergenic 10.0%
!! GATACTAATTAAATAGTTAA+GGG + chr1_1:21830882-21830901 None:intergenic 15.0%
!!! AGTTTTAATTCAAAAACATT+AGG + chr1_1:21830784-21830803 None:intergenic 15.0%
!!! TGTTTTTGAATTAAAACTAA+CGG - chr1_1:21830786-21830805 Msa0013970:CDS 15.0%
!! GATACTAATTAAATAGTTAA+GGG - chr1_1:21830882-21830901 Msa0013970:CDS 15.0%
!!! ATTATAAATTGATGATAGAT+TGG + chr1_1:21831535-21831554 None:intergenic 15.0%
!!! AATTTCACACTTATTTTTTA+GGG + chr1_1:21831752-21831771 None:intergenic 15.0%
!!! AAATTTCACACTTATTTTTT+AGG + chr1_1:21831753-21831772 None:intergenic 15.0%
!! CAATGAACATATAATAAAAT+AGG - chr1_1:21831938-21831957 Msa0013970:intron 15.0%
!! TTTCAAATATGAATTTGATA+AGG - chr1_1:21832211-21832230 Msa0013970:intron 15.0%
!!! TTCCTATTATTTTTCTAAAA+AGG + chr1_1:21832617-21832636 None:intergenic 15.0%
!! GAAGAAAAAGATATAAAATA+AGG - chr1_1:21832750-21832769 Msa0013970:intron 15.0%
!!! ATACACTCTTATTTATTTTA+AGG + chr1_1:21833141-21833160 None:intergenic 15.0%
!!! TAAAATAAATAAGAGTGTAT+TGG - chr1_1:21833141-21833160 Msa0013970:intron 15.0%
!! AATAAACTTATATTTAGTGA+CGG - chr1_1:21833230-21833249 Msa0013970:intron 15.0%
!! TAGACATATATAGTATATAA+CGG - chr1_1:21833368-21833387 Msa0013970:intron 15.0%
!!! TGTATTTAAAAATTTGTTGA+GGG + chr1_1:21833630-21833649 None:intergenic 15.0%
!!! ATGTATTTAAAAATTTGTTG+AGG + chr1_1:21833631-21833650 None:intergenic 15.0%
!!! TAAAAAATTTCTTCAACTTT+TGG - chr1_1:21833743-21833762 Msa0013970:intron 15.0%
!! AATTTCATTTACAAATATGA+AGG + chr1_1:21833829-21833848 None:intergenic 15.0%
!!! TTGTTTTACTAAATTTTTGA+TGG - chr1_1:21833943-21833962 Msa0013970:intron 15.0%
!!! NNNNNNNNCATAGCAATTTT+AGG - chr1_1:21834546-21834565 Msa0013970:intron 15.0%
!!! NNNNNNNCATAGCAATTTTA+GGG - chr1_1:21834547-21834566 Msa0013970:intron 15.0%
!!! TATATTTTTATTTCTGTAAG+AGG - chr1_1:21835254-21835273 Msa0013970:intron 15.0%
!! AATTAACTAGTTAGTAATTA+GGG - chr1_1:21835490-21835509 Msa0013970:intron 15.0%
!! TTGAAACATAAACTTTATAT+TGG + chr1_1:21835723-21835742 None:intergenic 15.0%
!!! ACTTATTTTTGTAAGTTTTA+CGG + chr1_1:21836078-21836097 None:intergenic 15.0%
!! AATAAGTAACAATAATTGTT+CGG - chr1_1:21836091-21836110 Msa0013970:intron 15.0%
!! TGTATAAAAAAAGAAAAAGA+AGG - chr1_1:21836349-21836368 Msa0013970:intron 15.0%
!! GTATAAAAAAAGAAAAAGAA+GGG - chr1_1:21836350-21836369 Msa0013970:intron 15.0%
!! TATAAAAAAAGAAAAAGAAG+GGG - chr1_1:21836351-21836370 Msa0013970:intron 15.0%
!! ATGCAGAAAATAAAAATAAT+GGG + chr1_1:21837869-21837888 None:intergenic 15.0%
!! AATGCAGAAAATAAAAATAA+TGG + chr1_1:21837870-21837889 None:intergenic 15.0%
!!! TTTTATTAGATAATACTTGA+GGG + chr1_1:21837954-21837973 None:intergenic 15.0%
!!! TTTTTATTAGATAATACTTG+AGG + chr1_1:21837955-21837974 None:intergenic 15.0%
!! AAAACAAATTTAAGCATAAA+AGG + chr1_1:21838010-21838029 None:intergenic 15.0%
!! TTCACAATAAGAATATAATA+GGG + chr1_1:21838385-21838404 None:intergenic 15.0%
!! TTTCACAATAAGAATATAAT+AGG + chr1_1:21838386-21838405 None:intergenic 15.0%
!! AATTGAAATTTACATTTACA+TGG - chr1_1:21839155-21839174 Msa0013970:intron 15.0%
!!! ATATTATCATCTTTTTTTAG+GGG + chr1_1:21839308-21839327 None:intergenic 15.0%
!!! GTATATTATCATCTTTTTTT+AGG + chr1_1:21839310-21839329 None:intergenic 15.0%
!! GATAATATACTTGTAAAAAA+AGG - chr1_1:21839320-21839339 Msa0013970:intron 15.0%
!! ATATATAACTAGTATATACA+TGG + chr1_1:21839375-21839394 None:intergenic 15.0%
!!! ACTATTCTTCTTTTTTTTTT+TGG + chr1_1:21839452-21839471 None:intergenic 15.0%
!! AAAAAAAAAAAGAAGAATAG+TGG - chr1_1:21839451-21839470 Msa0013970:intron 15.0%
!! TTAATTGAATTTATAGATCA+TGG - chr1_1:21839564-21839583 Msa0013970:intron 15.0%
!! ATTACTAAAATATCCTTATA+TGG - chr1_1:21839982-21840001 Msa0013970:intron 15.0%
!! TTATATACCAATTGAATTTA+GGG - chr1_1:21840874-21840893 Msa0013970:intron 15.0%
!!! AAAAAGTTGGTATATTTATA+GGG + chr1_1:21840917-21840936 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+AGG + chr1_1:21841291-21841310 None:intergenic 15.0%
!!! TTCATATTAAATTCATGTTT+TGG - chr1_1:21841151-21841170 Msa0013970:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr1_1:21841291-21841310 Msa0013970:intron 15.0%
!!! GAAAAGTTGATATATTTATA+GGG - chr1_1:21841351-21841370 Msa0013970:intron 15.0%
!! ATTGTACATTATAAATTCAA+GGG + chr1_1:21841394-21841413 None:intergenic 15.0%
!! TATTGTACATTATAAATTCA+AGG + chr1_1:21841395-21841414 None:intergenic 15.0%
!!! ATGGTTTTTGTAAAAAAAAA+GGG + chr1_1:21842689-21842708 None:intergenic 15.0%
!!! AATGGTTTTTGTAAAAAAAA+AGG + chr1_1:21842688-21842707 None:intergenic 15.0%
!!! TTAATTCTTTAATCCTTTTA+AGG - chr1_1:21842064-21842083 Msa0013970:CDS 15.0%
!! ATTATGTTTAATTCCTTAAA+AGG + chr1_1:21842080-21842099 None:intergenic 15.0%
!!! TTAATTCTTTAATCCTTTTA+AGG + chr1_1:21842064-21842083 None:intergenic 15.0%
!! AAAAAAAAAAAAAAGGTTTG+AGG - chr1_1:21842701-21842720 Msa0013970:intron 15.0%
!!! TATCATTGTATTTCTTTTTA+GGG + chr1_1:21843208-21843227 None:intergenic 15.0%
!!! TTATCATTGTATTTCTTTTT+AGG + chr1_1:21843209-21843228 None:intergenic 15.0%
!! TAAAACTTAGTATATTTAGA+GGG + chr1_1:21843651-21843670 None:intergenic 15.0%
!! ATAAAACTTAGTATATTTAG+AGG + chr1_1:21843652-21843671 None:intergenic 15.0%
!! ATTTAAATCAAAGAAATTTC+GGG + chr1_1:21843720-21843739 None:intergenic 15.0%
!!! GAAATTTCTTTGATTTAAAT+AGG - chr1_1:21843720-21843739 Msa0013970:intron 15.0%
!!! AGATCTCATTTTTTTTTTTT+TGG - chr1_1:21844032-21844051 Msa0013970:CDS 15.0%
!! TAATTAAATAGTTGACATAA+CGG - chr1_1:21844148-21844167 Msa0013970:CDS 15.0%
!!! GATAATTTGTTGAATTGATT+TGG + chr1_1:21830347-21830366 None:intergenic 20.0%
!! ATCAATTCAACAAATTATCA+AGG - chr1_1:21830348-21830367 Msa0013970:intron 20.0%
!!! TATATTTTCCCTCTAAATAT+AGG - chr1_1:21830483-21830502 Msa0013970:CDS 20.0%
!! CGATACTAATTAAATAGTTA+AGG + chr1_1:21830881-21830900 None:intergenic 20.0%
!!! CTATTTAATTAGTATCGTTT+TGG + chr1_1:21830878-21830897 None:intergenic 20.0%
!! CGATACTAATTAAATAGTTA+AGG - chr1_1:21830881-21830900 Msa0013970:CDS 20.0%
!! ACACATTCAAGATAAAAATT+TGG + chr1_1:21830992-21831011 None:intergenic 20.0%
!! AACTGATAAATATTCTATGA+TGG + chr1_1:21831387-21831406 None:intergenic 20.0%
!!! TTTTACTTTGACTTAAACTT+TGG - chr1_1:21831568-21831587 Msa0013970:intron 20.0%
!!! TTTACTTTGACTTAAACTTT+GGG - chr1_1:21831569-21831588 Msa0013970:intron 20.0%
!!! ACCTCTAAAAAGAAAAATTT+GGG + chr1_1:21831780-21831799 None:intergenic 20.0%
!! TTAAAATAGGTTATCAATCA+TGG - chr1_1:21832062-21832081 Msa0013970:intron 20.0%
!! TGTTTATAATAGTGATTGAA+CGG - chr1_1:21832480-21832499 Msa0013970:intron 20.0%
!!! AGTATATTAGTTTAGTTACA+GGG - chr1_1:21832503-21832522 Msa0013970:intron 20.0%
!!! GTCCTTTTTAGAAAAATAAT+AGG - chr1_1:21832612-21832631 Msa0013970:intron 20.0%
!! TAAAAATAGAAACATTGCAT+TGG + chr1_1:21833079-21833098 None:intergenic 20.0%
!! AAAGAAAAAGGAAAAAAAAG+AGG - chr1_1:21833422-21833441 Msa0013970:intron 20.0%
!! AAGAAAAAGGAAAAAAAAGA+GGG - chr1_1:21833423-21833442 Msa0013970:intron 20.0%
!! AGCTTATACTTATCTTAATT+GGG + chr1_1:21833508-21833527 None:intergenic 20.0%
!! AAGCTTATACTTATCTTAAT+TGG + chr1_1:21833509-21833528 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+GGG + chr1_1:21833741-21833760 None:intergenic 20.0%
!!! AAGTTGAAGAAATTTTTTAG+AGG + chr1_1:21833742-21833761 None:intergenic 20.0%
!!! ATGGATTATAAATAGATTGA+TGG - chr1_1:21833962-21833981 Msa0013970:intron 20.0%
!! TGGATTATAAATAGATTGAT+GGG - chr1_1:21833963-21833982 Msa0013970:intron 20.0%
!! GGATTATTCAACTAAAATTA+AGG - chr1_1:21834042-21834061 Msa0013970:intron 20.0%
!!! TATATCTTCTTGTTGTAAAA+CGG + chr1_1:21834242-21834261 None:intergenic 20.0%
!!! NNNNNNCATAGCAATTTTAG+GGG - chr1_1:21834548-21834567 Msa0013970:intron 20.0%
!! TAAACAAGAAATTATGAATG+AGG + chr1_1:21834991-21835010 None:intergenic 20.0%
!! TAAAAAGATTTAGTTACACA+TGG + chr1_1:21835122-21835141 None:intergenic 20.0%
!!! ATGTGTAACTAAATCTTTTT+AGG - chr1_1:21835121-21835140 Msa0013970:intron 20.0%
!! ATATCGAACAAAAATATACA+GGG + chr1_1:21835167-21835186 None:intergenic 20.0%
!! TAATTAGTCAAAGATATCAT+AGG - chr1_1:21835394-21835413 Msa0013970:intron 20.0%
!! GAATTAACTAGTTAGTAATT+AGG - chr1_1:21835489-21835508 Msa0013970:intron 20.0%
!! ATGTTGAGTTTATATATCTT+AGG + chr1_1:21835919-21835938 None:intergenic 20.0%
!! ATAAGTAACAATAATTGTTC+GGG - chr1_1:21836092-21836111 Msa0013970:intron 20.0%
!! TGTTTATGTTATAAACGTAA+CGG + chr1_1:21836198-21836217 None:intergenic 20.0%
!! ATAAAAAAAGAAAAAGAAGG+GGG - chr1_1:21836352-21836371 Msa0013970:intron 20.0%
!!! TTCAGTCAATAATTTTTATC+GGG + chr1_1:21836586-21836605 None:intergenic 20.0%
!!! CTTCAGTCAATAATTTTTAT+CGG + chr1_1:21836587-21836606 None:intergenic 20.0%
!!! AATAAAAGTATCAAGGATTT+AGG - chr1_1:21836633-21836652 Msa0013970:intron 20.0%
!! AAATTTAAGCATAAAAGGAA+AGG + chr1_1:21838005-21838024 None:intergenic 20.0%
!!! CTTAAATTTGTTTTAGTCTT+AGG - chr1_1:21838016-21838035 Msa0013970:intron 20.0%
!!! TTTTTTGCATAAATTTCCTT+TGG + chr1_1:21838858-21838877 None:intergenic 20.0%
!! ATGCAAAAAAAAAGTTGAAA+TGG - chr1_1:21838868-21838887 Msa0013970:intron 20.0%
!! GATTCATTAAAATGTATAGT+TGG + chr1_1:21839046-21839065 None:intergenic 20.0%
!! TTCTGCACAAAAAAAAAAAA+AGG - chr1_1:21839127-21839146 Msa0013970:intron 20.0%
!!! TATATAATTGAAAGTTTTGG+TGG - chr1_1:21839634-21839653 Msa0013970:intron 20.0%
!!! ATATAATTGAAAGTTTTGGT+GGG - chr1_1:21839635-21839654 Msa0013970:intron 20.0%
!!! TTACACACTATATTTTGATT+AGG - chr1_1:21839770-21839789 Msa0013970:intron 20.0%
!!! TACACACTATATTTTGATTA+GGG - chr1_1:21839771-21839790 Msa0013970:intron 20.0%
!! TCATTGTCATGTTTATTATT+TGG - chr1_1:21840071-21840090 Msa0013970:CDS 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr1_1:21840223-21840242 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr1_1:21840224-21840243 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr1_1:21840225-21840244 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr1_1:21840266-21840285 Msa0013970:CDS 20.0%
!! TTAATACACATACAAACAAA+GGG - chr1_1:21840267-21840286 Msa0013970:CDS 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG - chr1_1:21840342-21840361 Msa0013970:intron 20.0%
!!! AGAGTATATGTTTTTATTTG+AGG - chr1_1:21840393-21840412 Msa0013970:intron 20.0%
!!! TATGTTTTTATTTGAGGAAT+TGG - chr1_1:21840399-21840418 Msa0013970:intron 20.0%
!!! ATGTTTTTATTTGAGGAATT+GGG - chr1_1:21840400-21840419 Msa0013970:intron 20.0%
!!! TTTTACTTCAAGAATTTGTA+TGG - chr1_1:21840497-21840516 Msa0013970:intron 20.0%
!!! TAAGAATCATGAATTTTCTA+TGG - chr1_1:21840526-21840545 Msa0013970:intron 20.0%
!! ATGATTTATGAAATTTCGAA+TGG - chr1_1:21840556-21840575 Msa0013970:intron 20.0%
!!! GTTTAAAAGTTGAAGTTTTT+TGG - chr1_1:21840592-21840611 Msa0013970:intron 20.0%
!! ATTTAGATGGATCAAAATTA+GGG + chr1_1:21840815-21840834 None:intergenic 20.0%
!! CTTATATACCAATTGAATTT+AGG - chr1_1:21840873-21840892 Msa0013970:intron 20.0%
!! TATTTAACCCTAAATTCAAT+TGG + chr1_1:21840884-21840903 None:intergenic 20.0%
!!! CAAAAAGTTGGTATATTTAT+AGG + chr1_1:21840918-21840937 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr1_1:21840981-21841000 Msa0013970:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - chr1_1:21841259-21841278 Msa0013970:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - chr1_1:21841260-21841279 Msa0013970:intron 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr1_1:21840981-21841000 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr1_1:21841290-21841309 Msa0013970:intron 20.0%
!!! CGAAAAGTTGATATATTTAT+AGG - chr1_1:21841350-21841369 Msa0013970:intron 20.0%
!!! ATCCTTTTGAAATAGATTAA+AGG + chr1_1:21841618-21841637 None:intergenic 20.0%
!! ATATTGATGTAGATACAAAA+CGG - chr1_1:21841704-21841723 Msa0013970:intron 20.0%
!! AATTCACATTTCTTCAATTA+TGG + chr1_1:21842136-21842155 None:intergenic 20.0%
!!! TTTTTTGAAGAATAGAAAAG+TGG - chr1_1:21842290-21842309 Msa0013970:intron 20.0%
!!! GGTTTTATTTGTACAAAAAA+AGG - chr1_1:21842311-21842330 Msa0013970:intron 20.0%
!! TATGAGAGATGAATAATATT+CGG + chr1_1:21842543-21842562 None:intergenic 20.0%
!! ATTGTGTTTAATTCCTTAAA+AGG - chr1_1:21842610-21842629 Msa0013970:intron 20.0%
!!! GCAATTTTACTATTATTTGT+AGG + chr1_1:21843011-21843030 None:intergenic 20.0%
!!! ATCATTGTATTTCTTTTTAG+GGG + chr1_1:21843207-21843226 None:intergenic 20.0%
!! TTTAAATAGGTTATCAATCA+TGG - chr1_1:21843733-21843752 Msa0013970:intron 20.0%
! TGGAGAAATTTATTTCAAAC+CGG - chr1_1:21830194-21830213 Msa0013970:three_prime_UTR 25.0%
! CTTCACTAAGATCAATTATT+GGG + chr1_1:21830306-21830325 None:intergenic 25.0%
! CAATTTAGCCTATATTTAGA+GGG + chr1_1:21830494-21830513 None:intergenic 25.0%
!! TATAGGCTAAATTGCATTTT+TGG - chr1_1:21830500-21830519 Msa0013970:CDS 25.0%
! CTATTTAATTAGTATCGCTT+TGG - chr1_1:21830565-21830584 Msa0013970:CDS 25.0%
!!! TTTTCTTCTGGAATTTTTCT+TGG + chr1_1:21830752-21830771 None:intergenic 25.0%
! TCTAAATAGGCAAACAAATA+TGG + chr1_1:21831259-21831278 None:intergenic 25.0%
!! CTTTTCTATTGTCTCTAAAT+AGG + chr1_1:21831272-21831291 None:intergenic 25.0%
! TGGAAAAAAAATGTAAGATG+TGG + chr1_1:21831367-21831386 None:intergenic 25.0%
! TCAAAACAAAATACCTTGAA+TGG + chr1_1:21831510-21831529 None:intergenic 25.0%
!! CCTCTAAAAAGAAAAATTTG+GGG + chr1_1:21831779-21831798 None:intergenic 25.0%
!! GACCTCTAAAAAGAAAAATT+TGG + chr1_1:21831781-21831800 None:intergenic 25.0%
! ATTTATATTAGACACATTGG+CGG + chr1_1:21832023-21832042 None:intergenic 25.0%
! AATTTGATAAGGTTCATCTA+TGG - chr1_1:21832222-21832241 Msa0013970:intron 25.0%
!! GAGTATATTAGTTTAGTTAC+AGG - chr1_1:21832502-21832521 Msa0013970:intron 25.0%
! TTATAATTAGGAACAAATGG+AGG + chr1_1:21832591-21832610 None:intergenic 25.0%
! TCCATTTGTTCCTAATTATA+AGG - chr1_1:21832590-21832609 Msa0013970:intron 25.0%
! ACCTTATAATTAGGAACAAA+TGG + chr1_1:21832594-21832613 None:intergenic 25.0%
! CTAAAAAGGACCTTATAATT+AGG + chr1_1:21832603-21832622 None:intergenic 25.0%
!! AAGACATAATTTCCTTTTGT+GGG - chr1_1:21832882-21832901 Msa0013970:intron 25.0%
!! CGATGTAAATATACTACTTT+TGG + chr1_1:21833001-21833020 None:intergenic 25.0%
! TGTACTTGAAAATACCAAAA+TGG - chr1_1:21833179-21833198 Msa0013970:intron 25.0%
! AGATTCTTTATATGGTCTAT+CGG + chr1_1:21833338-21833357 None:intergenic 25.0%
! GTATGTGAAGATTCTTTATA+TGG + chr1_1:21833346-21833365 None:intergenic 25.0%
! ACCTAGTATATGAAAGAAAA+AGG - chr1_1:21833410-21833429 Msa0013970:intron 25.0%
!! TCCTTTTTCTTTCATATACT+AGG + chr1_1:21833414-21833433 None:intergenic 25.0%
! TTTACTGATCTAACTAATCA+GGG + chr1_1:21833470-21833489 None:intergenic 25.0%
! ATTTACTGATCTAACTAATC+AGG + chr1_1:21833471-21833490 None:intergenic 25.0%
! GCTTATACTTATCTTAATTG+GGG + chr1_1:21833507-21833526 None:intergenic 25.0%
!!! TGTTGAGGGTTTTATAATTA+TGG + chr1_1:21833616-21833635 None:intergenic 25.0%
! ATCAGCAAATATTAATGCTA+TGG - chr1_1:21833668-21833687 Msa0013970:intron 25.0%
!!! AGTGGTAATGGAAATTTTTT+AGG + chr1_1:21833772-21833791 None:intergenic 25.0%
!! AAAATTTCCATTACCACTTT+TGG - chr1_1:21833774-21833793 Msa0013970:intron 25.0%
! TTCAACTAAAATTAAGGAGT+TGG - chr1_1:21834048-21834067 Msa0013970:intron 25.0%
! TCAACTAAAATTAAGGAGTT+GGG - chr1_1:21834049-21834068 Msa0013970:intron 25.0%
! ATCATGAATTTGATTAGTGA+AGG - chr1_1:21834079-21834098 Msa0013970:intron 25.0%
! TCATGAATTTGATTAGTGAA+GGG - chr1_1:21834080-21834099 Msa0013970:intron 25.0%
! TGATAATCTTAGTGATTCAT+TGG - chr1_1:21834132-21834151 Msa0013970:intron 25.0%
! TTACAACAAGAAGATATATG+TGG - chr1_1:21834244-21834263 Msa0013970:intron 25.0%
! TACAACAAGAAGATATATGT+GGG - chr1_1:21834245-21834264 Msa0013970:intron 25.0%
! ATGTTCTCAAATCTACAAAA+TGG + chr1_1:21834432-21834451 None:intergenic 25.0%
!! NNNNNCATAGCAATTTTAGG+GGG - chr1_1:21834549-21834568 Msa0013970:intron 25.0%
! ACCTAATAAGACTTACAAAT+GGG - chr1_1:21834670-21834689 Msa0013970:intron 25.0%
! CACTTAAAACGACATAAAAT+CGG - chr1_1:21834738-21834757 Msa0013970:intron 25.0%
!!! TCTTTTCCTGTTCTTATTTT+GGG - chr1_1:21834906-21834925 Msa0013970:intron 25.0%
! AAATTATGAATGAGGAATAC+TGG + chr1_1:21834983-21835002 None:intergenic 25.0%
! TATCGAACAAAAATATACAG+GGG + chr1_1:21835166-21835185 None:intergenic 25.0%
!!! TTCAAGATAATGGTCTTATT+AGG + chr1_1:21835551-21835570 None:intergenic 25.0%
! TATTACTTGATGAAAATGAC+TGG - chr1_1:21836158-21836177 Msa0013970:intron 25.0%
!!! TTTTTGTTTGTGTTTGTTTC+AGG - chr1_1:21836454-21836473 Msa0013970:intron 25.0%
!!! TTTTGTTTGTGTTTGTTTCA+GGG - chr1_1:21836455-21836474 Msa0013970:intron 25.0%
!!! TGCAGTTAATAAAAGTATCA+AGG - chr1_1:21836626-21836645 Msa0013970:intron 25.0%
! ATTTGTACTGAAATCAAGAA+AGG - chr1_1:21836960-21836979 Msa0013970:CDS 25.0%
! TATTCTAGTAAAGCAAAGAT+TGG - chr1_1:21837581-21837600 Msa0013970:CDS 25.0%
! AACAGAAAAAGAAATGAAGT+TGG + chr1_1:21837926-21837945 None:intergenic 25.0%
!! GTATTCATTCAAAGCATTTA+AGG - chr1_1:21838038-21838057 Msa0013970:intron 25.0%
! CCACAAAAGGTAAATATATA+GGG - chr1_1:21838110-21838129 Msa0013970:intron 25.0%
! AGAATGGATATGGAAATATT+TGG + chr1_1:21838206-21838225 None:intergenic 25.0%
! AATATTTCCATATCCATTCT+AGG - chr1_1:21838206-21838225 Msa0013970:intron 25.0%
! CGAACACTCATAATATATAT+TGG + chr1_1:21838253-21838272 None:intergenic 25.0%
! GTTATTATTGCTTGAATTTG+CGG - chr1_1:21838281-21838300 Msa0013970:intron 25.0%
! ACAATAAGAATATAATAGGG+TGG + chr1_1:21838382-21838401 None:intergenic 25.0%
!!! TATAATCCTTTTGAGACAAA+GGG + chr1_1:21838529-21838548 None:intergenic 25.0%
!!! TTATAATCCTTTTGAGACAA+AGG + chr1_1:21838530-21838549 None:intergenic 25.0%
! TCATTAAGAACAATAAGTAG+AGG - chr1_1:21838810-21838829 Msa0013970:intron 25.0%
!!! ATAAATTTCCTTTGGAACTT+GGG + chr1_1:21838850-21838869 None:intergenic 25.0%
! GTAAAAGAAACTTAATTGCA+TGG + chr1_1:21839203-21839222 None:intergenic 25.0%
! ATTGATATTATTTGCATGCA+AGG + chr1_1:21839247-21839266 None:intergenic 25.0%
! AACATTAGACAATAGAATAG+TGG - chr1_1:21839415-21839434 Msa0013970:intron 25.0%
! TTTATAGATCATGGTTAATG+TGG - chr1_1:21839573-21839592 Msa0013970:intron 25.0%
!!! ACACACTATATTTTGATTAG+GGG - chr1_1:21839772-21839791 Msa0013970:intron 25.0%
! TTTGACTACCTGTTATTATA+CGG - chr1_1:21839894-21839913 Msa0013970:intron 25.0%
! CTTAATTTATTATCCGGTAT+GGG + chr1_1:21839959-21839978 None:intergenic 25.0%
! ACTTAATTTATTATCCGGTA+TGG + chr1_1:21839960-21839979 None:intergenic 25.0%
! CTAAAATATCCTTATATGGA+TGG - chr1_1:21839986-21840005 Msa0013970:intron 25.0%
! CAAATGAAGTTATTGAAGTT+TGG - chr1_1:21840427-21840446 Msa0013970:intron 25.0%
!!! AATTTCGAATGGATTATGTA+TGG - chr1_1:21840567-21840586 Msa0013970:intron 25.0%
! GATTTAGATGGATCAAAATT+AGG + chr1_1:21840816-21840835 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr1_1:21840948-21840967 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr1_1:21840949-21840968 None:intergenic 25.0%
! TTATAAGGACTAAAAGTTGA+AGG + chr1_1:21840962-21840981 None:intergenic 25.0%
!!! AAGTTGAAGGAATTTTTTTG+AGG - chr1_1:21841319-21841338 Msa0013970:intron 25.0%
!!! AGTTGAAGGAATTTTTTTGA+GGG - chr1_1:21841320-21841339 Msa0013970:intron 25.0%
!! TCAAGGGTTAAATATGTTTT+TGG + chr1_1:21841378-21841397 None:intergenic 25.0%
!!! GCTAGAACTTTTTTTTTTGA+AGG + chr1_1:21841494-21841513 None:intergenic 25.0%
! GTCCTTTAATCTATTTCAAA+AGG - chr1_1:21841613-21841632 Msa0013970:intron 25.0%
!! TTTCAAAAGGTTTTCATCTT+TGG + chr1_1:21841800-21841819 None:intergenic 25.0%
! TTGTAAAAAAAAAGGGTTTG+AGG + chr1_1:21841994-21842013 None:intergenic 25.0%
! GAATAATATTCGGTAGTTAA+TGG + chr1_1:21842533-21842552 None:intergenic 25.0%
! CTCTCATATTTCTTCATTTA+TGG - chr1_1:21842555-21842574 Msa0013970:intron 25.0%
!! AGTTGTTACTTGTAACTAAA+AGG + chr1_1:21842905-21842924 None:intergenic 25.0%
! TACTATTATTTGTAGGAACT+AGG + chr1_1:21843004-21843023 None:intergenic 25.0%
! TATAATAACGCCAAAATACT+AGG - chr1_1:21843264-21843283 Msa0013970:intron 25.0%
!! GACAATAATTCCTAGTATTT+TGG + chr1_1:21843277-21843296 None:intergenic 25.0%
! TACACAGTGATATATAGTAA+TGG + chr1_1:21843337-21843356 None:intergenic 25.0%
! TGTATACTAAAGCATAATCA+AGG - chr1_1:21843358-21843377 Msa0013970:intron 25.0%
! CTTCACTAAGATCAATTATT+GGG + chr1_1:21830306-21830325 None:intergenic 25.0%
!!! GATAATTTGTTGAATTGTGT+TGG + chr1_1:21843549-21843568 None:intergenic 25.0%
! CACAATTCAACAAATTATCA+AGG - chr1_1:21843550-21843569 Msa0013970:intron 25.0%
! CTTATCAGATTCATATTTCA+AGG + chr1_1:21843884-21843903 None:intergenic 25.0%
! CTTGAAATATGAATCTGATA+AGG - chr1_1:21843882-21843901 Msa0013970:intron 25.0%
ACTAAGATCAATTATTGGGA+TGG + chr1_1:21830302-21830321 None:intergenic 30.0%
GCTTCACTAAGATCAATTAT+TGG + chr1_1:21830307-21830326 None:intergenic 30.0%
ATCTTAGTGAAGCACAAAAT+GGG - chr1_1:21830314-21830333 Msa0013970:intron 30.0%
GCAATTTAGCCTATATTTAG+AGG + chr1_1:21830495-21830514 None:intergenic 30.0%
AAAAAGGACCAAAATGTGTA+AGG + chr1_1:21830636-21830655 None:intergenic 30.0%
ATGATATGAAGATGAAGAAG+AGG + chr1_1:21830703-21830722 None:intergenic 30.0%
! AGGTTTTCTTCATTTTCTTC+TGG + chr1_1:21830764-21830783 None:intergenic 30.0%
! CTTAGGGCTAAATTATGTTT+TGG + chr1_1:21830909-21830928 None:intergenic 30.0%
!! TGTGTTGCTTAGTATACTTA+GGG + chr1_1:21830925-21830944 None:intergenic 30.0%
TAAGTATACTAAGCAACACA+GGG - chr1_1:21830925-21830944 Msa0013970:CDS 30.0%
! AAATTTTGAACCCTGATCTA+GGG + chr1_1:21830962-21830981 None:intergenic 30.0%
!! AAAAGTGTCTTACACATTCA+TGG - chr1_1:21831229-21831248 Msa0013970:intron 30.0%
CCTTGAATGGAAATTAAATC+TGG + chr1_1:21831497-21831516 None:intergenic 30.0%
! CCAGATTTAATTTCCATTCA+AGG - chr1_1:21831494-21831513 Msa0013970:intron 30.0%
! CCCCAAATTTTTCTTTTTAG+AGG - chr1_1:21831776-21831795 Msa0013970:intron 30.0%
!!! TTTTGAGATTTTAGTGGTCT+GGG + chr1_1:21831892-21831911 None:intergenic 30.0%
!!! TTTTTGAGATTTTAGTGGTC+TGG + chr1_1:21831893-21831912 None:intergenic 30.0%
GACCACTAAAATCTCAAAAA+CGG - chr1_1:21831893-21831912 Msa0013970:intron 30.0%
GTAAATTTGAAGAGTTGAGA+AGG - chr1_1:21831962-21831981 Msa0013970:intron 30.0%
GGGATTTATATTAGACACAT+TGG + chr1_1:21832026-21832045 None:intergenic 30.0%
!! GGAAACAATGAGTGTTTTTA+AGG - chr1_1:21832106-21832125 Msa0013970:intron 30.0%
!! AACAATGAGTGTTTTTAAGG+AGG - chr1_1:21832109-21832128 Msa0013970:intron 30.0%
ATTGCTAGTATTAATCAGAG+AGG + chr1_1:21832432-21832451 None:intergenic 30.0%
! TATTAGTTTAGTTACAGGGA+CGG - chr1_1:21832507-21832526 Msa0013970:intron 30.0%
ATGTTTAAACAATGCCCTTA+GGG + chr1_1:21832792-21832811 None:intergenic 30.0%
AATGTTTAAACAATGCCCTT+AGG + chr1_1:21832793-21832812 None:intergenic 30.0%
! AAAAGTAGCAACTTTTGCAT+TGG - chr1_1:21832814-21832833 Msa0013970:intron 30.0%
! CAAGACATAATTTCCTTTTG+TGG - chr1_1:21832881-21832900 Msa0013970:intron 30.0%
AAAAGCTAAATAATGCCCTT+GGG + chr1_1:21833118-21833137 None:intergenic 30.0%
! GTCTCTTTATAAGACCATTT+TGG + chr1_1:21833196-21833215 None:intergenic 30.0%
AAACTTATATTTAGTGACGG+AGG - chr1_1:21833233-21833252 Msa0013970:intron 30.0%
TATACTAGGTCTCAAACAAT+TGG + chr1_1:21833400-21833419 None:intergenic 30.0%
TTACTGATCTAACTAATCAG+GGG + chr1_1:21833469-21833488 None:intergenic 30.0%
AAAGTGATGCTTGTTTGAAA+TGG - chr1_1:21833903-21833922 Msa0013970:intron 30.0%
!! ATGGTGGATAATGATTAAGT+TGG + chr1_1:21834162-21834181 None:intergenic 30.0%
GTTATACCAAGTGTTAAACT+TGG + chr1_1:21834193-21834212 None:intergenic 30.0%
!! ATGTTGATAACAAATGCATG+AGG + chr1_1:21834316-21834335 None:intergenic 30.0%
!! CATGCATTTGTTATCAACAT+AGG - chr1_1:21834316-21834335 Msa0013970:intron 30.0%
CTTGAATCTTCGTAATTCTT+CGG + chr1_1:21834626-21834645 None:intergenic 30.0%
GACCTAATAAGACTTACAAA+TGG - chr1_1:21834669-21834688 Msa0013970:intron 30.0%
!! TCCCATTTGTAAGTCTTATT+AGG + chr1_1:21834674-21834693 None:intergenic 30.0%
TAATAAGACTTACAAATGGG+AGG - chr1_1:21834673-21834692 Msa0013970:intron 30.0%
GACATAAAATCGGAGAATTT+GGG - chr1_1:21834748-21834767 Msa0013970:intron 30.0%
!! GTCTTTTCCTGTTCTTATTT+TGG - chr1_1:21834905-21834924 Msa0013970:intron 30.0%
TTTATAGTGAGAGTTTCTAC+CGG + chr1_1:21834958-21834977 None:intergenic 30.0%
! TATCTTCTCCTTGATTTTCT+AGG - chr1_1:21835062-21835081 Msa0013970:intron 30.0%
! ATCTTCTCCTTGATTTTCTA+GGG - chr1_1:21835063-21835082 Msa0013970:intron 30.0%
AAACATACCCTAGAAAATCA+AGG + chr1_1:21835073-21835092 None:intergenic 30.0%
!!! GTTCGCTGTTAAGTTTTATT+AGG - chr1_1:21835230-21835249 Msa0013970:intron 30.0%
TAGTTAGTGAGAGCAATATT+AGG + chr1_1:21835316-21835335 None:intergenic 30.0%
TTACTGATAACTATCTGTCT+AGG - chr1_1:21835357-21835376 Msa0013970:intron 30.0%
AACTAGTTAATTCCTAGCTT+CGG + chr1_1:21835482-21835501 None:intergenic 30.0%
! ATTAGGTTATAGCCTTAAGT+CGG + chr1_1:21835534-21835553 None:intergenic 30.0%
TACTAAGGGTTTCAAGATAA+TGG + chr1_1:21835561-21835580 None:intergenic 30.0%
TTATCTTGAAACCCTTAGTA+AGG - chr1_1:21835561-21835580 Msa0013970:intron 30.0%
TTAGTTAGTAGTTCGACAAA+CGG + chr1_1:21835606-21835625 None:intergenic 30.0%
TGTTATAAACGTAACGGTTA+TGG + chr1_1:21836192-21836211 None:intergenic 30.0%
! TAAACACGTCATCAAGTTTT+TGG - chr1_1:21836212-21836231 Msa0013970:intron 30.0%
TTTGTTTGTGTTTGTTTCAG+GGG - chr1_1:21836456-21836475 Msa0013970:intron 30.0%
TTTCGTTGTAATGATTGAAC+TGG + chr1_1:21836509-21836528 None:intergenic 30.0%
TCAAACATCTGATACTTCTT+GGG + chr1_1:21836537-21836556 None:intergenic 30.0%
! CTTTAGGAGAAGAAGTAATA+GGG - chr1_1:21836662-21836681 Msa0013970:intron 30.0%
TCATTAAGTGTTAAGTCAAG+CGG - chr1_1:21836777-21836796 Msa0013970:intron 30.0%
AAAGATGAATATGAGGTAGA+GGG + chr1_1:21836848-21836867 None:intergenic 30.0%
CAAGTAGAAAGATGAATATG+AGG + chr1_1:21836855-21836874 None:intergenic 30.0%
CTCATATTCATCTTTCTACT+TGG - chr1_1:21836853-21836872 Msa0013970:intron 30.0%
TCGTCTACTCATTCTTAAAA+TGG + chr1_1:21837117-21837136 None:intergenic 30.0%
AAATATTTCCTTACAGCTTC+CGG + chr1_1:21837237-21837256 None:intergenic 30.0%
AGCTGTAAGGAAATATTTCA+AGG - chr1_1:21837239-21837258 Msa0013970:CDS 30.0%
GTAAGGAAATATTTCAAGGA+CGG - chr1_1:21837243-21837262 Msa0013970:CDS 30.0%
CAATAGAATTGAAACTTCCA+GGG + chr1_1:21837289-21837308 None:intergenic 30.0%
CTGGAAGTTTCAATTCTATT+GGG - chr1_1:21837288-21837307 Msa0013970:CDS 30.0%
ATTGTTAGATTGACAGTTGA+TGG + chr1_1:21837410-21837429 None:intergenic 30.0%
AATTCTCCTTGCAAAATTCA+TGG - chr1_1:21837619-21837638 Msa0013970:intron 30.0%
ACATTAAATTAAGCGCTACA+TGG - chr1_1:21837732-21837751 Msa0013970:intron 30.0%
CATTAAATTAAGCGCTACAT+GGG - chr1_1:21837733-21837752 Msa0013970:intron 30.0%
AACTATGCTCTTTGAATCTA+TGG + chr1_1:21838079-21838098 None:intergenic 30.0%
GCCACAAAAGGTAAATATAT+AGG - chr1_1:21838109-21838128 Msa0013970:intron 30.0%
! CCCTATATATTTACCTTTTG+TGG + chr1_1:21838113-21838132 None:intergenic 30.0%
ATCTCATCGTTTATGCTATT+CGG + chr1_1:21838177-21838196 None:intergenic 30.0%
GTCATTAATAAAGAAACGTC+TGG + chr1_1:21838422-21838441 None:intergenic 30.0%
! GAACTCTATTTGATTTCACT+TGG - chr1_1:21838470-21838489 Msa0013970:intron 30.0%
!! CATAAATTTCCTTTGGAACT+TGG + chr1_1:21838851-21838870 None:intergenic 30.0%
TATTATTTGCATGCAAGGTT+TGG + chr1_1:21839242-21839261 None:intergenic 30.0%
GGAAAATAAAAAGAAGAGAG+AGG - chr1_1:21839480-21839499 Msa0013970:intron 30.0%
AAATAAAAAGAAGAGAGAGG+AGG - chr1_1:21839483-21839502 Msa0013970:intron 30.0%
AATAAAAAGAAGAGAGAGGA+GGG - chr1_1:21839484-21839503 Msa0013970:intron 30.0%
!!! GGTTAGTTTTCTAATAACGT+GGG - chr1_1:21839505-21839524 Msa0013970:intron 30.0%
!! AAAGTTTTGGTGGGAAAATT+TGG - chr1_1:21839644-21839663 Msa0013970:intron 30.0%
ATTCTCATTTATTATACCCG+TGG + chr1_1:21839875-21839894 None:intergenic 30.0%
CAAATGAGAGCTTAGATATA+GGG + chr1_1:21840126-21840145 None:intergenic 30.0%
TCAAATGAGAGCTTAGATAT+AGG + chr1_1:21840127-21840146 None:intergenic 30.0%
! TATTAATTAGGGGCATGTTT+AGG + chr1_1:21840213-21840232 None:intergenic 30.0%
AAGAAATGTGAAAAAGGCAA+TGG - chr1_1:21840348-21840367 Msa0013970:intron 30.0%
AGAAATGTGAAAAAGGCAAT+GGG - chr1_1:21840349-21840368 Msa0013970:intron 30.0%
CGGATATCATATTTATCCAA+CGG - chr1_1:21840740-21840759 Msa0013970:intron 30.0%
GGATATCATATTTATCCAAC+GGG - chr1_1:21840741-21840760 Msa0013970:intron 30.0%
ATCAAAATTAGGGATGTCAA+TGG + chr1_1:21840805-21840824 None:intergenic 30.0%
TTCAAGCACAATGATTTAGA+TGG + chr1_1:21840828-21840847 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr1_1:21841306-21841325 Msa0013970:intron 30.0%
TAAATACTCATCCACATAAG+TGG + chr1_1:21841584-21841603 None:intergenic 30.0%
! AAAGGTTTTCATCTTTGGAT+AGG + chr1_1:21841795-21841814 None:intergenic 30.0%
! TGTCAACAGCAATTTTCAAA+AGG + chr1_1:21841813-21841832 None:intergenic 30.0%
!! AGTTTTATGTCTTGTACCTT+AGG + chr1_1:21842960-21842979 None:intergenic 30.0%
GACATAAAACTTAGCAAGTA+TGG - chr1_1:21842969-21842988 Msa0013970:intron 30.0%
TAATGGCAAAAACTAAGAAG+GGG + chr1_1:21843320-21843339 None:intergenic 30.0%
GTAATGGCAAAAACTAAGAA+GGG + chr1_1:21843321-21843340 None:intergenic 30.0%
AGTAATGGCAAAAACTAAGA+AGG + chr1_1:21843322-21843341 None:intergenic 30.0%
! TGGAGAAATTTGTTTCAAAC+CGG - chr1_1:21843396-21843415 Msa0013970:intron 30.0%
ACTAAGATCAATTATTGGGA+TGG + chr1_1:21830302-21830321 None:intergenic 30.0%
GCTTCACTAAGATCAATTAT+TGG + chr1_1:21830307-21830326 None:intergenic 30.0%
! GGAAACAATGAGCATTTTTA+AGG - chr1_1:21843777-21843796 Msa0013970:intron 30.0%
AATCTGATAAGGTTCATCTA+TGG - chr1_1:21843893-21843912 Msa0013970:intron 30.0%
GATCTTAGTGAAGCACAAAA+TGG - chr1_1:21830313-21830332 Msa0013970:intron 35.0%
TCTTAGTGAAGCACAAAATG+GGG - chr1_1:21830315-21830334 Msa0013970:intron 35.0%
! CTCTCTTTCCTTACACATTT+TGG - chr1_1:21830625-21830644 Msa0013970:intron 35.0%
!!! TTTTTGCTGTTGAAAGTCGA+TGG + chr1_1:21830728-21830747 None:intergenic 35.0%
! CTTCTCTCTGTTACACATTT+TGG + chr1_1:21830818-21830837 None:intergenic 35.0%
!! CTGTGTTGCTTAGTATACTT+AGG + chr1_1:21830926-21830945 None:intergenic 35.0%
CTAAGTATACTAAGCAACAC+AGG - chr1_1:21830924-21830943 Msa0013970:CDS 35.0%
! GAAATTTTGAACCCTGATCT+AGG + chr1_1:21830963-21830982 None:intergenic 35.0%
CTCTCTTACTAGGAAAAAGT+TGG + chr1_1:21831643-21831662 None:intergenic 35.0%
!! CAACTTTTTCCTAGTAAGAG+AGG - chr1_1:21831641-21831660 Msa0013970:intron 35.0%
!!! CACTTATTTTTTAGGGCCTA+GGG + chr1_1:21831745-21831764 None:intergenic 35.0%
!!! ACACTTATTTTTTAGGGCCT+AGG + chr1_1:21831746-21831765 None:intergenic 35.0%
TTAGTTGGGACCTAAATTGT+AGG - chr1_1:21831861-21831880 Msa0013970:intron 35.0%
AGCCATATATATAATGGCCA+GGG + chr1_1:21832000-21832019 None:intergenic 35.0%
AAGTCGTGCTTGTATTCATT+AGG + chr1_1:21832146-21832165 None:intergenic 35.0%
TTGATAAGGTTCATCTATGG+AGG - chr1_1:21832225-21832244 Msa0013970:intron 35.0%
TGATAAGGTTCATCTATGGA+GGG - chr1_1:21832226-21832245 Msa0013970:intron 35.0%
CTGTATGTAGTTGGATATTC+AGG + chr1_1:21832302-21832321 None:intergenic 35.0%
CTGAATATCCAACTACATAC+AGG - chr1_1:21832300-21832319 Msa0013970:intron 35.0%
TGCATTTACCTGTATGTAGT+TGG + chr1_1:21832311-21832330 None:intergenic 35.0%
ACACTAACACTCTCTCTTAA+AGG + chr1_1:21832701-21832720 None:intergenic 35.0%
TTGTTTAAGGAACCCACAAA+AGG + chr1_1:21832897-21832916 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG - chr1_1:21832905-21832924 Msa0013970:intron 35.0%
TAGCAAGACCCACAAAATAA+AGG - chr1_1:21832935-21832954 Msa0013970:intron 35.0%
AGCAAGACCCACAAAATAAA+GGG - chr1_1:21832936-21832955 Msa0013970:intron 35.0%
!!! AGCAAGACCCTTTATTTTGT+GGG + chr1_1:21832946-21832965 None:intergenic 35.0%
!!! TAGCAAGACCCTTTATTTTG+TGG + chr1_1:21832947-21832966 None:intergenic 35.0%
AAAGCTAAATAATGCCCTTG+GGG + chr1_1:21833117-21833136 None:intergenic 35.0%
GAAAAGCTAAATAATGCCCT+TGG + chr1_1:21833119-21833138 None:intergenic 35.0%
TATGGTCTATCGGTATGTAT+GGG + chr1_1:21833328-21833347 None:intergenic 35.0%
ATATGGTCTATCGGTATGTA+TGG + chr1_1:21833329-21833348 None:intergenic 35.0%
! AAAGAGGGTATAATCATGTG+TGG - chr1_1:21833438-21833457 Msa0013970:intron 35.0%
TTAAAGGTAGTGACCAAAAG+TGG + chr1_1:21833790-21833809 None:intergenic 35.0%
! CTACACAAGAGTTGACTTAA+AGG + chr1_1:21833806-21833825 None:intergenic 35.0%
! TGCTTGTTTGAAATGGATGA+TGG - chr1_1:21833910-21833929 Msa0013970:intron 35.0%
AAATTAAGGAGTTGGGTTCA+AGG - chr1_1:21834056-21834075 Msa0013970:intron 35.0%
AATTTGATTAGTGAAGGGCT+GGG - chr1_1:21834085-21834104 Msa0013970:intron 35.0%
CAAGTGTTAAACTTGGATCA+GGG + chr1_1:21834186-21834205 None:intergenic 35.0%
CACGAAGAAATCATGCAAAT+TGG - chr1_1:21834586-21834605 Msa0013970:intron 35.0%
CGAAGAATTACGAAGATTCA+AGG - chr1_1:21834624-21834643 Msa0013970:intron 35.0%
CGACATAAAATCGGAGAATT+TGG - chr1_1:21834747-21834766 Msa0013970:intron 35.0%
GCTTTACCCAAAATAAGAAC+AGG + chr1_1:21834915-21834934 None:intergenic 35.0%
TTATAGTGAGAGTTTCTACC+GGG + chr1_1:21834957-21834976 None:intergenic 35.0%
TAGAACTGTAGCAGTTCAAA+AGG - chr1_1:21835009-21835028 Msa0013970:intron 35.0%
CAACTCTAGATTAGGTACTT+AGG - chr1_1:21835279-21835298 Msa0013970:intron 35.0%
ATCTACGTCTACCTTACTAA+GGG + chr1_1:21835575-21835594 None:intergenic 35.0%
AATCTACGTCTACCTTACTA+AGG + chr1_1:21835576-21835595 None:intergenic 35.0%
TAGTAAGGTAGACGTAGATT+AGG - chr1_1:21835576-21835595 Msa0013970:intron 35.0%
AGTAAGGTAGACGTAGATTA+GGG - chr1_1:21835577-21835596 Msa0013970:intron 35.0%
AGTGTCCTAAGATTCATAGA+TGG - chr1_1:21835647-21835666 Msa0013970:intron 35.0%
GTGTCCTAAGATTCATAGAT+GGG - chr1_1:21835648-21835667 Msa0013970:intron 35.0%
ATCCAACAACGTATATACAG+AGG - chr1_1:21835953-21835972 Msa0013970:intron 35.0%
TCCAACAACGTATATACAGA+GGG - chr1_1:21835954-21835973 Msa0013970:intron 35.0%
! ACTTTTCTGCAACCAAAAAC+AGG - chr1_1:21836003-21836022 Msa0013970:intron 35.0%
ACAATAATTGTTCGGGTGAA+AGG - chr1_1:21836099-21836118 Msa0013970:intron 35.0%
AAAAGAAAAAGAAGGGGGTA+TGG - chr1_1:21836357-21836376 Msa0013970:intron 35.0%
!! ACTTCTAGAATAGTGCTACT+TGG - chr1_1:21836421-21836440 Msa0013970:intron 35.0%
!! CTTCTAGAATAGTGCTACTT+GGG - chr1_1:21836422-21836441 Msa0013970:intron 35.0%
CAAACATCTGATACTTCTTG+GGG + chr1_1:21836536-21836555 None:intergenic 35.0%
GTCAAACATCTGATACTTCT+TGG + chr1_1:21836538-21836557 None:intergenic 35.0%
GATGTTTGACTCTGACTTAT+TGG - chr1_1:21836548-21836567 Msa0013970:intron 35.0%
CCTATTACTTCTTCTCCTAA+AGG + chr1_1:21836664-21836683 None:intergenic 35.0%
! CCTTTAGGAGAAGAAGTAAT+AGG - chr1_1:21836661-21836680 Msa0013970:intron 35.0%
AAGAAGTAATAGGGACTTTG+AGG - chr1_1:21836671-21836690 Msa0013970:intron 35.0%
!! TTAATGAAGTGTCGTTCTGA+CGG + chr1_1:21836764-21836783 None:intergenic 35.0%
GAAAGATGAATATGAGGTAG+AGG + chr1_1:21836849-21836868 None:intergenic 35.0%
CATCTTTCTACTTGGACAAT+AGG - chr1_1:21836861-21836880 Msa0013970:intron 35.0%
TCTCTTGTACTACAGTTTCA+GGG + chr1_1:21836929-21836948 None:intergenic 35.0%
ATTCTGCTTCTCTTTGAACT+GGG + chr1_1:21837060-21837079 None:intergenic 35.0%
TATTCTGCTTCTCTTTGAAC+TGG + chr1_1:21837061-21837080 None:intergenic 35.0%
ATGGAATCTTTGTCGACAAT+AGG + chr1_1:21837098-21837117 None:intergenic 35.0%
TAAAGTTAGGGAGTCTGTAA+AGG + chr1_1:21837163-21837182 None:intergenic 35.0%
!! ACGACAACTTGCTAAAGTTA+GGG + chr1_1:21837175-21837194 None:intergenic 35.0%
!! TACGACAACTTGCTAAAGTT+AGG + chr1_1:21837176-21837195 None:intergenic 35.0%
! GTCTTTTCTCTTCAACTTCT+GGG + chr1_1:21837201-21837220 None:intergenic 35.0%
CCAATAGAATTGAAACTTCC+AGG + chr1_1:21837290-21837309 None:intergenic 35.0%
CCTGGAAGTTTCAATTCTAT+TGG - chr1_1:21837287-21837306 Msa0013970:CDS 35.0%
! AGATTTTCTATCAGCCATGT+TGG + chr1_1:21837368-21837387 None:intergenic 35.0%
GTCAATCTAACAATTGCAGA+AGG - chr1_1:21837416-21837435 Msa0013970:CDS 35.0%
GGATCAATCAAAAATCCAGA+TGG - chr1_1:21837437-21837456 Msa0013970:CDS 35.0%
AATCAAAAATCCAGATGGAG+TGG - chr1_1:21837442-21837461 Msa0013970:CDS 35.0%
GATGTCACAAAGTTTGATGA+AGG + chr1_1:21837497-21837516 None:intergenic 35.0%
TCTTCTTTATCTTGTTCGGA+AGG + chr1_1:21837649-21837668 None:intergenic 35.0%
TCCGAACAAGATAAAGAAGA+CGG - chr1_1:21837649-21837668 Msa0013970:intron 35.0%
TCCGTCTTCTTTATCTTGTT+CGG + chr1_1:21837653-21837672 None:intergenic 35.0%
! ATTCAAAGCATTTAAGGCAG+AGG - chr1_1:21838044-21838063 Msa0013970:intron 35.0%
!! TATATAGGGTTTGCTAGTGA+AGG - chr1_1:21838124-21838143 Msa0013970:intron 35.0%
AAGTATCTCACAACCTAGAA+TGG + chr1_1:21838222-21838241 None:intergenic 35.0%
TTCTTTACAGACGATCAGTT+AGG - chr1_1:21838307-21838326 Msa0013970:intron 35.0%
! CACACGAGTCAATTTTTCTT+TGG - chr1_1:21838338-21838357 Msa0013970:intron 35.0%
ATATAATAGGGTGGCTTGAA+AGG + chr1_1:21838373-21838392 None:intergenic 35.0%
AATAGAGTTCATGTAAGTGC+AGG + chr1_1:21838460-21838479 None:intergenic 35.0%
GATTTCACTTGGAGTTAGAT+AGG - chr1_1:21838481-21838500 Msa0013970:intron 35.0%
TATTGTAAACATGTGTTGCG+TGG + chr1_1:21839004-21839023 None:intergenic 35.0%
! AAAGAAGAATAGTGGAGACT+TGG - chr1_1:21839459-21839478 Msa0013970:intron 35.0%
!!! GGGTTAGTTTTCTAATAACG+TGG - chr1_1:21839504-21839523 Msa0013970:intron 35.0%
TTTCTAATAACGTGGGATTG+TGG - chr1_1:21839512-21839531 Msa0013970:intron 35.0%
! TTTTGGTGGGAAAATTTGGA+GGG - chr1_1:21839648-21839667 Msa0013970:intron 35.0%
GTTCGTATCCGTATAATAAC+AGG + chr1_1:21839905-21839924 None:intergenic 35.0%
TTTGATTGTACCCATATCCA+CGG - chr1_1:21839930-21839949 Msa0013970:intron 35.0%
TCAATGTCACCATCCATATA+AGG + chr1_1:21839998-21840017 None:intergenic 35.0%
GATGGTGACATTGACATAAT+TGG - chr1_1:21840004-21840023 Msa0013970:intron 35.0%
TGAAAGGGGGTTTACATTTA+GGG + chr1_1:21840162-21840181 None:intergenic 35.0%
TTGAAAGGGGGTTTACATTT+AGG + chr1_1:21840163-21840182 None:intergenic 35.0%
CATACAAACAAAGGGCAATT+TGG - chr1_1:21840275-21840294 Msa0013970:CDS 35.0%
AAAAAATACATGGGTACCCA+TGG - chr1_1:21840658-21840677 Msa0013970:intron 35.0%
ATCATATTTATCCAACGGGA+CGG - chr1_1:21840745-21840764 Msa0013970:intron 35.0%
TATCATACTATCCGTATCCA+TGG - chr1_1:21840775-21840794 Msa0013970:intron 35.0%
ATCATACTATCCGTATCCAT+GGG - chr1_1:21840776-21840795 Msa0013970:intron 35.0%
GAGGGACTAAAACAAAAAGT+TGG + chr1_1:21840930-21840949 None:intergenic 35.0%
TGTCACTAACTAATCAATGC+TGG + chr1_1:21841675-21841694 None:intergenic 35.0%
!!! TCTAGTGTGTGTTTGGTTTT+AGG + chr1_1:21841740-21841759 None:intergenic 35.0%
! AAAATACGTTTTTACCCCCT+CGG - chr1_1:21841860-21841879 Msa0013970:intron 35.0%
TAACTGCCGAATTATGAAAC+CGG - chr1_1:21841887-21841906 Msa0013970:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG - chr1_1:21841916-21841935 Msa0013970:intron 35.0%
! CCGAAGTTTTCAATTTTCCT+CGG + chr1_1:21842743-21842762 None:intergenic 35.0%
CCGAGGAAAATTGAAAACTT+CGG - chr1_1:21841949-21841968 Msa0013970:intron 35.0%
AAAAAGGTTTGAGGATTCCT+CGG - chr1_1:21842710-21842729 Msa0013970:intron 35.0%
CCGAGGAAAATTGAAAACTT+CGG + chr1_1:21841949-21841968 None:intergenic 35.0%
! CCGAAGTTTTCAATTTTCCT+CGG - chr1_1:21842743-21842762 Msa0013970:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG + chr1_1:21841916-21841935 None:intergenic 35.0%
TAACTGCCGAATTATGAAAC+CGG + chr1_1:21841887-21841906 None:intergenic 35.0%
TACTGTTGACACATTGCATA+AGG + chr1_1:21842873-21842892 None:intergenic 35.0%
TACCAACCAGTTGCAAAATA+AGG - chr1_1:21842924-21842943 Msa0013970:intron 35.0%
!!! TACCTTATTTTGCAACTGGT+TGG + chr1_1:21842929-21842948 None:intergenic 35.0%
!!! CTTGTACCTTATTTTGCAAC+TGG + chr1_1:21842933-21842952 None:intergenic 35.0%
AATGGCAAAAACTAAGAAGG+GGG + chr1_1:21843319-21843338 None:intergenic 35.0%
! AGCATAATCAAGGTACTTCA+AGG - chr1_1:21843368-21843387 Msa0013970:intron 35.0%
! GCATAATCAAGGTACTTCAA+GGG - chr1_1:21843369-21843388 Msa0013970:intron 35.0%
! CATAATCAAGGTACTTCAAG+GGG - chr1_1:21843370-21843389 Msa0013970:intron 35.0%
!!! ATTGGGATTTTGAAATTCCC+TGG + chr1_1:21843473-21843492 None:intergenic 35.0%
!!! TTGGGATGGTTTTGTTGATT+GGG + chr1_1:21830288-21830307 None:intergenic 35.0%
!!! ATTGGGATGGTTTTGTTGAT+TGG + chr1_1:21830289-21830308 None:intergenic 35.0%
GATCTTAGTGAAGCACAAAA+TGG - chr1_1:21830313-21830332 Msa0013970:intron 35.0%
CATGTCTTCAAAATGTCATC+AGG + chr1_1:21843844-21843863 None:intergenic 35.0%
AGATTCATATTTCAAGGTGC+TGG + chr1_1:21843878-21843897 None:intergenic 35.0%
TGATAAGGTTCATCTATGGA+GGG - chr1_1:21832226-21832245 Msa0013970:intron 35.0%
CTGTATGTAGTTGGATATTC+AGG + chr1_1:21832302-21832321 None:intergenic 35.0%
CTGAATATCCAACTACATAC+AGG - chr1_1:21832300-21832319 Msa0013970:intron 35.0%
TGCATTTACCTGTATGTAGT+TGG + chr1_1:21832311-21832330 None:intergenic 35.0%
!!! ATTGCGATTTTGAAATGCCC+TGG + chr1_1:21830271-21830290 None:intergenic 40.0%
ACAAATTATCAAGGCTGCTG+AGG - chr1_1:21830357-21830376 Msa0013970:exon 40.0%
TGAGGAGTTTGGATTCTTTC+AGG - chr1_1:21830375-21830394 Msa0013970:CDS 40.0%
AAGTTGGCAAAGTTGTGTCT+GGG + chr1_1:21831627-21831646 None:intergenic 40.0%
AAAGTTGGCAAAGTTGTGTC+TGG + chr1_1:21831628-21831647 None:intergenic 40.0%
AGGAGAGAGTCAATGCAATA+TGG - chr1_1:21831661-21831680 Msa0013970:intron 40.0%
AGTCAATGCAATATGGTGCA+AGG - chr1_1:21831668-21831687 Msa0013970:intron 40.0%
!!! TTATTTTTTAGGGCCTAGGG+CGG + chr1_1:21831742-21831761 None:intergenic 40.0%
!!! GGCCGTTTTTGAGATTTTAG+TGG + chr1_1:21831898-21831917 None:intergenic 40.0%
CCATATATATAATGGCCAGG+GGG + chr1_1:21831998-21832017 None:intergenic 40.0%
GCCATATATATAATGGCCAG+GGG + chr1_1:21831999-21832018 None:intergenic 40.0%
GAGCCATATATATAATGGCC+AGG + chr1_1:21832001-21832020 None:intergenic 40.0%
TGGCGGAGCCATATATATAA+TGG + chr1_1:21832006-21832025 None:intergenic 40.0%
TATCAATCATGGTCTCTCGT+TGG - chr1_1:21832073-21832092 Msa0013970:intron 40.0%
TCTCTCGTTGGATGAAATGA+AGG - chr1_1:21832085-21832104 Msa0013970:intron 40.0%
CATGTCTTCAAATTGTCCTC+AGG + chr1_1:21832173-21832192 None:intergenic 40.0%
CGGATCGAGACATAATGTTT+AGG - chr1_1:21832527-21832546 Msa0013970:intron 40.0%
CGAGACATAATGTTTAGGTG+TGG - chr1_1:21832532-21832551 Msa0013970:intron 40.0%
AAATGCTAACAAGTGCCCTA+AGG - chr1_1:21832774-21832793 Msa0013970:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG - chr1_1:21832775-21832794 Msa0013970:intron 40.0%
GTTCCTTAAACAATGCCCTT+AGG - chr1_1:21832904-21832923 Msa0013970:intron 40.0%
GGAGGCAATACTAAAAATGC+AGG - chr1_1:21833251-21833270 Msa0013970:intron 40.0%
GTAGTGACCAAAAGTGGTAA+TGG + chr1_1:21833784-21833803 None:intergenic 40.0%
!! TTTTCTTGCAGAGAGTGTGT+TGG - chr1_1:21834019-21834038 Msa0013970:intron 40.0%
! TTTCTTGCAGAGAGTGTGTT+GGG - chr1_1:21834020-21834039 Msa0013970:intron 40.0%
GAATTTGATTAGTGAAGGGC+TGG - chr1_1:21834084-21834103 Msa0013970:intron 40.0%
CCAAGTGTTAAACTTGGATC+AGG + chr1_1:21834187-21834206 None:intergenic 40.0%
CCTGATCCAAGTTTAACACT+TGG - chr1_1:21834184-21834203 Msa0013970:intron 40.0%
! GAGGTAAGCATCAAAGTGTT+TGG + chr1_1:21834215-21834234 None:intergenic 40.0%
! CTTGTTGTAAAACGGTGATG+AGG + chr1_1:21834234-21834253 None:intergenic 40.0%
ATGTGGGCTTCAAGTACTTA+AGG - chr1_1:21834261-21834280 Msa0013970:intron 40.0%
AAGTACTTAAGGATGGAGAG+TGG - chr1_1:21834272-21834291 Msa0013970:intron 40.0%
ATGCATTAAGTGTACCTGCA+AGG + chr1_1:21834347-21834366 None:intergenic 40.0%
! AATTTTGTTCCCAAGTCCTG+AGG - chr1_1:21834696-21834715 Msa0013970:intron 40.0%
! AATAACTTGCCTCAGGACTT+GGG + chr1_1:21834708-21834727 None:intergenic 40.0%
! AAATAACTTGCCTCAGGACT+TGG + chr1_1:21834709-21834728 None:intergenic 40.0%
! GTCTTCAAATAACTTGCCTC+AGG + chr1_1:21834715-21834734 None:intergenic 40.0%
TATAGTGAGAGTTTCTACCG+GGG + chr1_1:21834956-21834975 None:intergenic 40.0%
ACTGTAGCAGTTCAAAAGGA+AGG - chr1_1:21835013-21835032 Msa0013970:intron 40.0%
GTTCAAAAGGAAGGCAACTT+TGG - chr1_1:21835022-21835041 Msa0013970:intron 40.0%
! AAGAGGTGCAACTCTAGATT+AGG - chr1_1:21835271-21835290 Msa0013970:intron 40.0%
! TTAGGTACTTAGGTTGTGAC+AGG - chr1_1:21835289-21835308 Msa0013970:intron 40.0%
! TAGGTACTTAGGTTGTGACA+GGG - chr1_1:21835290-21835309 Msa0013970:intron 40.0%
TCTGCCCATCTATGAATCTT+AGG + chr1_1:21835655-21835674 None:intergenic 40.0%
ATTGTTTCCCAAGGCAATGA+AGG + chr1_1:21835694-21835713 None:intergenic 40.0%
TTCATTGCCTTGGGAAACAA+TGG - chr1_1:21835693-21835712 Msa0013970:intron 40.0%
GGGAGTTTCCTAAATAGGTA+GGG + chr1_1:21835870-21835889 None:intergenic 40.0%
TGGGAGTTTCCTAAATAGGT+AGG + chr1_1:21835871-21835890 None:intergenic 40.0%
CCTATTTAGGAAACTCCCAA+CGG - chr1_1:21835872-21835891 Msa0013970:intron 40.0%
! ATACAAGTGATGATGCCGTT+GGG + chr1_1:21835890-21835909 None:intergenic 40.0%
! TATACAAGTGATGATGCCGT+TGG + chr1_1:21835891-21835910 None:intergenic 40.0%
CCAACAACGTATATACAGAG+GGG - chr1_1:21835955-21835974 Msa0013970:intron 40.0%
! AGAGCGAGTTTACCTGTTTT+TGG + chr1_1:21836018-21836037 None:intergenic 40.0%
!! AGTAGAGTATCGTATCCACA+TGG + chr1_1:21836130-21836149 None:intergenic 40.0%
ATTTCAACAATCCCCGACAA+CGG + chr1_1:21836240-21836259 None:intergenic 40.0%
TTGTTTCAGGGGACGAATAA+TGG - chr1_1:21836467-21836486 Msa0013970:intron 40.0%
AGGATTTAGGAGATGCCTTT+AGG - chr1_1:21836646-21836665 Msa0013970:intron 40.0%
TGCATTGTAGAGTCCTTTGA+GGG - chr1_1:21836735-21836754 Msa0013970:intron 40.0%
AGGACAAGAGCAGGATAAAA+TGG - chr1_1:21836881-21836900 Msa0013970:intron 40.0%
CTCTTGTACTACAGTTTCAG+GGG + chr1_1:21836928-21836947 None:intergenic 40.0%
GTCTCTTGTACTACAGTTTC+AGG + chr1_1:21836930-21836949 None:intergenic 40.0%
ACTGTAGTACAAGAGACTGT+TGG - chr1_1:21836933-21836952 Msa0013970:CDS 40.0%
AGAACAATGTGACCACTTGT+CGG - chr1_1:21836983-21837002 Msa0013970:CDS 40.0%
TAAGATGAGTTTCCGACAAG+TGG + chr1_1:21836998-21837017 None:intergenic 40.0%
GTCGGAAACTCATCTTAAGA+AGG - chr1_1:21837001-21837020 Msa0013970:CDS 40.0%
GACAATAGGCTCGAATATTG+GGG + chr1_1:21837084-21837103 None:intergenic 40.0%
CGACAATAGGCTCGAATATT+GGG + chr1_1:21837085-21837104 None:intergenic 40.0%
TCGACAATAGGCTCGAATAT+TGG + chr1_1:21837086-21837105 None:intergenic 40.0%
! GGTCTTTTCTCTTCAACTTC+TGG + chr1_1:21837202-21837221 None:intergenic 40.0%
! AAAGACCTGACTGCATTTTC+CGG - chr1_1:21837215-21837234 Msa0013970:CDS 40.0%
! ACGGTTACCTCTAAAGAAGA+AGG - chr1_1:21837262-21837281 Msa0013970:CDS 40.0%
! AGTCTCAATGTCACTTACTG+AGG - chr1_1:21837549-21837568 Msa0013970:CDS 40.0%
! GGAACTCCATGAATTTTGCA+AGG + chr1_1:21837628-21837647 None:intergenic 40.0%
AAACCACTCTAACAAGATCG+AGG - chr1_1:21837695-21837714 Msa0013970:intron 40.0%
! CTTTTACGTCTTAAGCTCGA+CGG + chr1_1:21837775-21837794 None:intergenic 40.0%
!! ACGTAAAAGAAGCGCTGAAT+AGG - chr1_1:21837786-21837805 Msa0013970:intron 40.0%
!! TAAAAGAAGCGCTGAATAGG+AGG - chr1_1:21837789-21837808 Msa0013970:intron 40.0%
! TGCTATTCGGAAAAGAGTGT+AGG + chr1_1:21838164-21838183 None:intergenic 40.0%
CTCACAACCTAGAATGGATA+TGG + chr1_1:21838216-21838235 None:intergenic 40.0%
GAACTTGGGTATAGAGACAA+AGG + chr1_1:21838836-21838855 None:intergenic 40.0%
TCTCTATACCCAAGTTCCAA+AGG - chr1_1:21838839-21838858 Msa0013970:intron 40.0%
!! GTTTTGGTGGGAAAATTTGG+AGG - chr1_1:21839647-21839666 Msa0013970:intron 40.0%
ACAAAAATACCCATGTCCGT+GGG - chr1_1:21839797-21839816 Msa0013970:intron 40.0%
TTGATTGTACCCATATCCAC+GGG - chr1_1:21839931-21839950 Msa0013970:intron 40.0%
TGAGAGCTTAGATATAGGGA+CGG + chr1_1:21840122-21840141 None:intergenic 40.0%
TCATATTTATCCAACGGGAC+GGG - chr1_1:21840746-21840765 Msa0013970:intron 40.0%
TCAATGGATACCCATGGATA+CGG + chr1_1:21840789-21840808 None:intergenic 40.0%
!!! GTTTTGACTCTCCACTTATG+TGG - chr1_1:21841570-21841589 Msa0013970:intron 40.0%
!!! GTGTTTGGTTTTAGGTGTTG+TGG + chr1_1:21841732-21841751 None:intergenic 40.0%
TAGAACCACCACAATTCCAT+GGG - chr1_1:21841756-21841775 Msa0013970:intron 40.0%
TGCTGTTGACACATTGCATA+AGG - chr1_1:21841822-21841841 Msa0013970:intron 40.0%
! TTAACTGCCGAAGTTTTCCT+CGG + chr1_1:21842769-21842788 None:intergenic 40.0%
AAAAGGGTTTGAGGATTCCT+CGG + chr1_1:21841985-21842004 None:intergenic 40.0%
! TTAACTGCCGAAGTTTTCCT+CGG - chr1_1:21842769-21842788 Msa0013970:intron 40.0%
! AAAATACGTTTTTGCCCCCT+CGG + chr1_1:21842835-21842854 None:intergenic 40.0%
ATAAGGTACAAGACAGCCTA+AGG - chr1_1:21842941-21842960 Msa0013970:intron 40.0%
TGTGAAAGATCATCACGTGT+TGG - chr1_1:21843032-21843051 Msa0013970:intron 40.0%
CATCACGTGTTGGAATATCT+AGG - chr1_1:21843042-21843061 Msa0013970:intron 40.0%
! GGGTGTATTTATGATGGAGA+AGG + chr1_1:21843299-21843318 None:intergenic 40.0%
! AGAAGGGGGTGTATTTATGA+TGG + chr1_1:21843305-21843324 None:intergenic 40.0%
!! AAATTCCCTGGTCTTGTTTC+TGG + chr1_1:21843461-21843480 None:intergenic 40.0%
ACAAATTATCAAGGCTGCTG+AGG - chr1_1:21830357-21830376 Msa0013970:exon 40.0%
TGAGGAGTTTGGATTCTTTC+AGG - chr1_1:21830375-21830394 Msa0013970:CDS 40.0%
TATCAATCATGGTCTCTCGT+TGG - chr1_1:21832073-21832092 Msa0013970:intron 40.0%
TCTCTCGTTGGATGAAATGA+AGG - chr1_1:21832085-21832104 Msa0013970:intron 40.0%
AAGTCGTGCTTGTACTCATT+AGG + chr1_1:21843817-21843836 None:intergenic 40.0%
CTGATAAGGTTCATCTATGG+AGG - chr1_1:21843896-21843915 Msa0013970:intron 40.0%
GCACAGATTTGATGCTTGAC+CGG + chr1_1:21830216-21830235 None:intergenic 45.0%
AAGCATCAAATCTGTGCCTG+AGG - chr1_1:21830219-21830238 Msa0013970:three_prime_UTR 45.0%
!! AAATGCCCTGGTCTTGTTTC+TGG + chr1_1:21830259-21830278 None:intergenic 45.0%
TGACTCTCTCCTCTCTTACT+AGG + chr1_1:21831653-21831672 None:intergenic 45.0%
! TGGTGCAAGGCCTAATTTTG+AGG - chr1_1:21831681-21831700 Msa0013970:intron 45.0%
! GGTGCAAGGCCTAATTTTGA+GGG - chr1_1:21831682-21831701 Msa0013970:intron 45.0%
!! AAGGCCTAATTTTGAGGGCA+GGG - chr1_1:21831687-21831706 Msa0013970:intron 45.0%
CTGGGACGAACCTACAATTT+AGG + chr1_1:21831874-21831893 None:intergenic 45.0%
TCAAAAACGGCCCTGTTTGA+GGG - chr1_1:21831906-21831925 Msa0013970:intron 45.0%
CCCCCTGGCCATTATATATA+TGG - chr1_1:21831995-21832014 Msa0013970:intron 45.0%
TAGACACCCAGCTTATCCTT+TGG - chr1_1:21832256-21832275 Msa0013970:intron 45.0%
ACTCCTCCAAAGGATAAGCT+GGG + chr1_1:21832265-21832284 None:intergenic 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG + chr1_1:21832787-21832806 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG + chr1_1:21832922-21832941 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG + chr1_1:21832923-21832942 None:intergenic 45.0%
TTCCTTAACCATTGCCCTGA+GGG + chr1_1:21832977-21832996 None:intergenic 45.0%
TTTCCTTAACCATTGCCCTG+AGG + chr1_1:21832978-21832997 None:intergenic 45.0%
TCATCTTAACCAATGCCCCA+AGG - chr1_1:21833099-21833118 Msa0013970:intron 45.0%
CATCTTAACCAATGCCCCAA+GGG - chr1_1:21833100-21833119 Msa0013970:intron 45.0%
AAATAATGCCCTTGGGGCAT+TGG + chr1_1:21833111-21833130 None:intergenic 45.0%
TTATATCAATACGCGCGACC+TGG + chr1_1:21833301-21833320 None:intergenic 45.0%
CTGATCTAACTAATCAGGGG+CGG + chr1_1:21833466-21833485 None:intergenic 45.0%
! TTCTTGCAGAGAGTGTGTTG+GGG - chr1_1:21834021-21834040 Msa0013970:intron 45.0%
GTTAAACTTGGATCAGGGCA+TGG + chr1_1:21834181-21834200 None:intergenic 45.0%
GGGCTTCAAGTACTTAAGGA+TGG - chr1_1:21834265-21834284 Msa0013970:intron 45.0%
TTGCCATACTCTCACGCATT+AGG - chr1_1:21834836-21834855 Msa0013970:intron 45.0%
ATGCCTAATGCGTGAGAGTA+TGG + chr1_1:21834842-21834861 None:intergenic 45.0%
!! GGAAGGCAACTTTGGAGTTT+CGG - chr1_1:21835030-21835049 Msa0013970:intron 45.0%
!! GAAGGCAACTTTGGAGTTTC+GGG - chr1_1:21835031-21835050 Msa0013970:intron 45.0%
TTCATAGATGGGCAGACCTA+AGG - chr1_1:21835659-21835678 Msa0013970:intron 45.0%
TCATAGATGGGCAGACCTAA+GGG - chr1_1:21835660-21835679 Msa0013970:intron 45.0%
TGGCTTTCCATTGTTTCCCA+AGG + chr1_1:21835703-21835722 None:intergenic 45.0%
AACTGCACATGTTGATCGCA+CGG + chr1_1:21835784-21835803 None:intergenic 45.0%
CAACATGTGCAGTTAGCCAT+CGG - chr1_1:21835790-21835809 Msa0013970:intron 45.0%
AATTAGGCATTTCCCTCCGA+TGG + chr1_1:21835809-21835828 None:intergenic 45.0%
TCGGAGGGAAATGCCTAATT+AGG - chr1_1:21835809-21835828 Msa0013970:intron 45.0%
CGTACACTGGGTACCTAATT+AGG + chr1_1:21835825-21835844 None:intergenic 45.0%
CCGTTGGGAGTTTCCTAAAT+AGG + chr1_1:21835875-21835894 None:intergenic 45.0%
CCCCTCTGTATATACGTTGT+TGG + chr1_1:21835958-21835977 None:intergenic 45.0%
CAGAAAAGTAAGCAGCGGTT+AGG + chr1_1:21835992-21836011 None:intergenic 45.0%
GGTTGCAGAAAAGTAAGCAG+CGG + chr1_1:21835997-21836016 None:intergenic 45.0%
!!! CAAGTTTTTGGTGCCGTTGT+CGG - chr1_1:21836224-21836243 Msa0013970:intron 45.0%
!!! AAGTTTTTGGTGCCGTTGTC+GGG - chr1_1:21836225-21836244 Msa0013970:intron 45.0%
CTGCATTGTAGAGTCCTTTG+AGG - chr1_1:21836734-21836753 Msa0013970:intron 45.0%
! TCAAGCGGACTCAATGAAAG+CGG - chr1_1:21836792-21836811 Msa0013970:intron 45.0%
TTGGACAATAGGACAAGAGC+AGG - chr1_1:21836872-21836891 Msa0013970:intron 45.0%
! TTTCAGGGGAGGATTTGTTC+GGG + chr1_1:21836914-21836933 None:intergenic 45.0%
! GTTTCAGGGGAGGATTTGTT+CGG + chr1_1:21836915-21836934 None:intergenic 45.0%
TTGTACTACAGTTTCAGGGG+AGG + chr1_1:21836925-21836944 None:intergenic 45.0%
!! CTTAAGAAGGAAGAAGCGCT+AGG - chr1_1:21837014-21837033 Msa0013970:CDS 45.0%
! TGCATTTTCCGGAAGCTGTA+AGG - chr1_1:21837226-21837245 Msa0013970:CDS 45.0%
AGAGAAGCTCAGTGTGGTTT+AGG - chr1_1:21837323-21837342 Msa0013970:CDS 45.0%
GCATGAACTTGACTCCAACA+TGG - chr1_1:21837351-21837370 Msa0013970:CDS 45.0%
! AATGTCACTTACTGAGGACG+AGG - chr1_1:21837555-21837574 Msa0013970:CDS 45.0%
ATGCCTCGATCTTGTTAGAG+TGG + chr1_1:21837701-21837720 None:intergenic 45.0%
ACGTTAATCATGCGCTGGAT+GGG - chr1_1:21837837-21837856 Msa0013970:intron 45.0%
! TACCTTTTGTGGCTGACGAA+GGG + chr1_1:21838102-21838121 None:intergenic 45.0%
! TTACCTTTTGTGGCTGACGA+AGG + chr1_1:21838103-21838122 None:intergenic 45.0%
AAACGTCTGGAGACTCAAAG+TGG + chr1_1:21838409-21838428 None:intergenic 45.0%
CACATGCCCTTTGTCTCAAA+AGG - chr1_1:21838520-21838539 Msa0013970:intron 45.0%
!! TGCAAGGTTTGGTGAAGAGA+TGG + chr1_1:21839231-21839250 None:intergenic 45.0%
GACAAAAATACCCATGTCCG+TGG - chr1_1:21839796-21839815 Msa0013970:intron 45.0%
AGCTTAGATATAGGGACGGA+GGG + chr1_1:21840118-21840137 None:intergenic 45.0%
GCAATGGGTGCCTACATTAA+GGG - chr1_1:21840364-21840383 Msa0013970:intron 45.0%
CTCTCTTCGTCCCTTAATGT+AGG + chr1_1:21840377-21840396 None:intergenic 45.0%
!! TGGTGGTTCTAGTGTGTGTT+TGG + chr1_1:21841747-21841766 None:intergenic 45.0%
CTAGAACCACCACAATTCCA+TGG - chr1_1:21841755-21841774 Msa0013970:intron 45.0%
CTTTGGATAGGTCTGATTGC+TGG + chr1_1:21841783-21841802 None:intergenic 45.0%
TGACACATTGCATAAGGCTG+TGG - chr1_1:21841828-21841847 Msa0013970:intron 45.0%
! CTGCAGCCGGTTTCATAATT+CGG + chr1_1:21842799-21842818 None:intergenic 45.0%
! CTGCAGCCGGTTTCATAATT+CGG - chr1_1:21842799-21842818 Msa0013970:intron 45.0%
TGACACATTGCATAAGGCTG+TGG + chr1_1:21841828-21841847 None:intergenic 45.0%
! CAAGGTACTTCAAGGGGATA+TGG - chr1_1:21843376-21843395 Msa0013970:intron 45.0%
GCACAGATTTGATGCTTGAC+CGG + chr1_1:21830216-21830235 None:intergenic 45.0%
TCAAGCATCAAATCTGTGCC+TGG - chr1_1:21830217-21830236 Msa0013970:three_prime_UTR 45.0%
CAAGCATCAAATCTGTGCCT+GGG - chr1_1:21830218-21830237 Msa0013970:three_prime_UTR 45.0%
AAGCATCAAATCTGTGCCTG+GGG - chr1_1:21830219-21830238 Msa0013970:three_prime_UTR 45.0%
TAGACACCCAGCTTATCCTT+TGG - chr1_1:21832256-21832275 Msa0013970:intron 45.0%
ACTGCTCCAAAGGATAAGCT+GGG + chr1_1:21843936-21843955 None:intergenic 45.0%
!! AAAAAAAAAAAAATAGTTAA+GGG + chr1_1:21830527-21830546 None:intergenic 5.0%
!! AAAAAAAAAAAAAATAGTTA+AGG + chr1_1:21830528-21830547 None:intergenic 5.0%
!!! TAACTATTTTTTTTTTTTTT+TGG - chr1_1:21830528-21830547 Msa0013970:CDS 5.0%
!!! ATAAATCAAATTTTAATTAA+GGG + chr1_1:21830851-21830870 None:intergenic 5.0%
!!! AATAAATCAAATTTTAATTA+AGG + chr1_1:21830850-21830869 None:intergenic 5.0%
!!! AATTAAAATTTGATTTATTT+TGG - chr1_1:21830594-21830613 Msa0013970:CDS 5.0%
!!! AATTAAAATTTGATTTATTT+TGG + chr1_1:21830594-21830613 None:intergenic 5.0%
!!! AATAAATCAAATTTTAATTA+AGG - chr1_1:21830850-21830869 Msa0013970:CDS 5.0%
!!! ATAAATCAAATTTTAATTAA+GGG - chr1_1:21830851-21830870 Msa0013970:CDS 5.0%
!! TTTATATATATTTATTAGTT+GGG - chr1_1:21831847-21831866 Msa0013970:intron 5.0%
!! TTTAATAAAAAAAAAAATGT+CGG + chr1_1:21832047-21832066 None:intergenic 5.0%
!!! TTTTTAATTTATTTATTTTC+TGG + chr1_1:21840643-21840662 None:intergenic 5.0%
!! TAAATAAATTAAAAAATACA+TGG - chr1_1:21840648-21840667 Msa0013970:intron 5.0%
!! AAATAAATTAAAAAATACAT+GGG - chr1_1:21840649-21840668 Msa0013970:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+GGG + chr1_1:21841175-21841194 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + chr1_1:21841174-21841193 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG - chr1_1:21841174-21841193 Msa0013970:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+GGG - chr1_1:21841175-21841194 Msa0013970:intron 5.0%
!! TAAAGAATTAAATTTAATTA+AGG + chr1_1:21842635-21842654 None:intergenic 5.0%
!! TAAAGAATTAAATTTAATTA+AGG - chr1_1:21842635-21842654 Msa0013970:intron 5.0%
!! TAAAGAATAAAAAAAATTAA+TGG - chr1_1:21842670-21842689 Msa0013970:intron 5.0%
!!! TTTTGTAAAAAAAAAAAAAA+AGG - chr1_1:21842694-21842713 Msa0013970:intron 5.0%
GGTGGGAATACATAGTCCTC+AGG + chr1_1:21830238-21830257 None:intergenic 50.0%
TTCCCACCAGAAACAAGACC+AGG - chr1_1:21830250-21830269 Msa0013970:three_prime_UTR 50.0%
TCCCACCAGAAACAAGACCA+GGG - chr1_1:21830251-21830270 Msa0013970:three_prime_UTR 50.0%
ATCAAGGCTGCTGAGGAGTT+TGG - chr1_1:21830364-21830383 Msa0013970:exon 50.0%
GTTGCTAGGACCCTAGATCA+GGG - chr1_1:21830949-21830968 Msa0013970:CDS 50.0%
!! CAAGGCCTAATTTTGAGGGC+AGG - chr1_1:21831686-21831705 Msa0013970:intron 50.0%
CTCAAAAACGGCCCTGTTTG+AGG - chr1_1:21831905-21831924 Msa0013970:intron 50.0%
CAAAAACGGCCCTGTTTGAG+GGG - chr1_1:21831907-21831926 Msa0013970:intron 50.0%
AAAAACGGCCCTGTTTGAGG+GGG - chr1_1:21831908-21831927 Msa0013970:intron 50.0%
GTCTTGAACCCCCTCAAACA+GGG + chr1_1:21831919-21831938 None:intergenic 50.0%
TGTCTTGAACCCCCTCAAAC+AGG + chr1_1:21831920-21831939 None:intergenic 50.0%
CAAGCACGACTTGTATCCTG+AGG - chr1_1:21832154-21832173 Msa0013970:intron 50.0%
ACACCCAGCTTATCCTTTGG+AGG - chr1_1:21832259-21832278 Msa0013970:intron 50.0%
CACTCCTCCAAAGGATAAGC+TGG + chr1_1:21832266-21832285 None:intergenic 50.0%
! CAGCTTATCCTTTGGAGGAG+TGG - chr1_1:21832264-21832283 Msa0013970:intron 50.0%
! AAGTGTTGCCACTCCTCCAA+AGG + chr1_1:21832275-21832294 None:intergenic 50.0%
ATGCAGGAAAACGAGCACGA+TGG - chr1_1:21833267-21833286 Msa0013970:intron 50.0%
GATTAGTGAAGGGCTGGGTT+TGG - chr1_1:21834090-21834109 Msa0013970:intron 50.0%
AAACTTGGATCAGGGCATGG+TGG + chr1_1:21834178-21834197 None:intergenic 50.0%
AAATCGGAGAATTTGGGCCC+AGG - chr1_1:21834754-21834773 Msa0013970:intron 50.0%
ACTAGGCATCCATGCACCTA+GGG - chr1_1:21834805-21834824 Msa0013970:intron 50.0%
TATGGCAAAAGCCATGCCCT+AGG + chr1_1:21834824-21834843 None:intergenic 50.0%
! CCTGCATTTTCAGATGCACG+GGG + chr1_1:21834877-21834896 None:intergenic 50.0%
! CCCTGCATTTTCAGATGCAC+GGG + chr1_1:21834878-21834897 None:intergenic 50.0%
CCCGTGCATCTGAAAATGCA+GGG - chr1_1:21834875-21834894 Msa0013970:intron 50.0%
! GCCCTGCATTTTCAGATGCA+CGG + chr1_1:21834879-21834898 None:intergenic 50.0%
GGGGTTTGGGCTAAAAGTGA+GGG + chr1_1:21834937-21834956 None:intergenic 50.0%
!! CTCACTTTTAGCCCAAACCC+CGG - chr1_1:21834936-21834955 Msa0013970:intron 50.0%
GAGAGTTTCTACCGGGGTTT+GGG + chr1_1:21834950-21834969 None:intergenic 50.0%
TGAGAGTTTCTACCGGGGTT+TGG + chr1_1:21834951-21834970 None:intergenic 50.0%
CCACTGGGTACTTACGTCTA+GGG + chr1_1:21835429-21835448 None:intergenic 50.0%
TCCACTGGGTACTTACGTCT+AGG + chr1_1:21835430-21835449 None:intergenic 50.0%
ACCCAGTGGATGATACCCAT+TGG - chr1_1:21835440-21835459 Msa0013970:intron 50.0%
CCCAATGGGTATCATCCACT+GGG + chr1_1:21835444-21835463 None:intergenic 50.0%
CCCAGTGGATGATACCCATT+GGG - chr1_1:21835441-21835460 Msa0013970:intron 50.0%
ACCCAATGGGTATCATCCAC+TGG + chr1_1:21835445-21835464 None:intergenic 50.0%
ATGATACCCATTGGGTCGTG+TGG - chr1_1:21835449-21835468 Msa0013970:intron 50.0%
AATGCACCACACGACCCAAT+GGG + chr1_1:21835458-21835477 None:intergenic 50.0%
TAATGCACCACACGACCCAA+TGG + chr1_1:21835459-21835478 None:intergenic 50.0%
TGTGGTGCATTACCGAAGCT+AGG - chr1_1:21835467-21835486 Msa0013970:intron 50.0%
! TAGCCTTAAGTCGGACAGCT+AGG + chr1_1:21835525-21835544 None:intergenic 50.0%
ATGAAGGCCAAGGTTCCCTT+AGG + chr1_1:21835678-21835697 None:intergenic 50.0%
! AACCTTGGCCTTCATTGCCT+TGG - chr1_1:21835683-21835702 Msa0013970:intron 50.0%
! ACCTTGGCCTTCATTGCCTT+GGG - chr1_1:21835684-21835703 Msa0013970:intron 50.0%
GCGGGGTCTTGCTAATTCAA+AGG + chr1_1:21835749-21835768 None:intergenic 50.0%
ATGTGCAGTTAGCCATCGGA+GGG - chr1_1:21835794-21835813 Msa0013970:intron 50.0%
AGGTGGTGCCCTACCTATTT+AGG - chr1_1:21835859-21835878 Msa0013970:intron 50.0%
GGGTGAAAGGACAATCCATG+TGG - chr1_1:21836112-21836131 Msa0013970:intron 50.0%
!!! AGTTTTTGGTGCCGTTGTCG+GGG - chr1_1:21836226-21836245 Msa0013970:intron 50.0%
! CAAGCGGACTCAATGAAAGC+GGG - chr1_1:21836793-21836812 Msa0013970:intron 50.0%
! TTCAGGGGAGGATTTGTTCG+GGG + chr1_1:21836913-21836932 None:intergenic 50.0%
AGCTTCCGGAAAATGCAGTC+AGG + chr1_1:21837223-21837242 None:intergenic 50.0%
CCAGGGTCCTTCTTCTTTAG+AGG + chr1_1:21837272-21837291 None:intergenic 50.0%
! CCTCTAAAGAAGAAGGACCC+TGG - chr1_1:21837269-21837288 Msa0013970:CDS 50.0%
ACCACACTGAGCTTCTCTCA+CGG + chr1_1:21837321-21837340 None:intergenic 50.0%
CTACATGGGAGTCAACCCAT+GGG - chr1_1:21837747-21837766 Msa0013970:intron 50.0%
TTAAGCTCGACGGTTCCCAT+GGG + chr1_1:21837765-21837784 None:intergenic 50.0%
CAACCTATTGACCGTCGTGA+CGG - chr1_1:21837812-21837831 Msa0013970:intron 50.0%
GATTAACGTCTCCGTCACGA+CGG + chr1_1:21837826-21837845 None:intergenic 50.0%
GACGTTAATCATGCGCTGGA+TGG - chr1_1:21837836-21837855 Msa0013970:intron 50.0%
TTAATCATGCGCTGGATGGG+AGG - chr1_1:21837840-21837859 Msa0013970:intron 50.0%
TTCCCTTCGTCAGCCACAAA+AGG - chr1_1:21838097-21838116 Msa0013970:intron 50.0%
! ATTTTACCTGCGGGTACCCA+CGG + chr1_1:21839816-21839835 None:intergenic 50.0%
GGTAAAATCCCTCACGGGTA+CGG - chr1_1:21839828-21839847 Msa0013970:intron 50.0%
GTAAAATCCCTCACGGGTAC+GGG - chr1_1:21839829-21839848 Msa0013970:intron 50.0%
TAAAATCCCTCACGGGTACG+GGG - chr1_1:21839830-21839849 Msa0013970:intron 50.0%
GGTAGCTAAACGGGTATCCA+CGG - chr1_1:21839855-21839874 Msa0013970:intron 50.0%
GTAGCTAAACGGGTATCCAC+GGG - chr1_1:21839856-21839875 Msa0013970:intron 50.0%
GTATGGGTACCCGTGGATAT+GGG + chr1_1:21839943-21839962 None:intergenic 50.0%
ATATCCACGGGTACCCATAC+CGG - chr1_1:21839943-21839962 Msa0013970:intron 50.0%
GAGCTTAGATATAGGGACGG+AGG + chr1_1:21840119-21840138 None:intergenic 50.0%
GGCAATGGGTGCCTACATTA+AGG - chr1_1:21840363-21840382 Msa0013970:intron 50.0%
! GCGGCTATTGAGGTATCCAT+GGG + chr1_1:21840677-21840696 None:intergenic 50.0%
CATGGATACCTCAATAGCCG+CGG - chr1_1:21840676-21840695 Msa0013970:intron 50.0%
TTTATCCAACGGGACGGGAA+CGG - chr1_1:21840751-21840770 Msa0013970:intron 50.0%
GGGATGTCAATGGATACCCA+TGG + chr1_1:21840795-21840814 None:intergenic 50.0%
TTGCTGGTCCCATGGAATTG+TGG + chr1_1:21841767-21841786 None:intergenic 50.0%
ATTCGGCAGTTAACTGCCGA+GGG + chr1_1:21842816-21842835 None:intergenic 50.0%
AATTCGGCAGTTAACTGCCG+AGG + chr1_1:21842815-21842834 None:intergenic 50.0%
ACTTCGGCAGTTAACTACCG+AGG - chr1_1:21841932-21841951 Msa0013970:intron 50.0%
ACTTCGGCAGTTAACTACCG+AGG + chr1_1:21841932-21841951 None:intergenic 50.0%
AATTCGGCAGTTAACTGCCG+AGG - chr1_1:21842815-21842834 Msa0013970:intron 50.0%
ATTCGGCAGTTAACTGCCGA+GGG - chr1_1:21842816-21842835 Msa0013970:intron 50.0%
TTCCCACCAGAAACAAGACC+AGG - chr1_1:21830250-21830269 Msa0013970:three_prime_UTR 50.0%
TCCCACCAGAAACAAGACCA+GGG - chr1_1:21830251-21830270 Msa0013970:three_prime_UTR 50.0%
!! TCCCTGGTCTTGTTTCTGGT+GGG + chr1_1:21843457-21843476 None:intergenic 50.0%
!! TTCCCTGGTCTTGTTTCTGG+TGG + chr1_1:21843458-21843477 None:intergenic 50.0%
ATCAAGGCTGCTGAGGAGTT+TGG - chr1_1:21830364-21830383 Msa0013970:exon 50.0%
CACTGCTCCAAAGGATAAGC+TGG + chr1_1:21843937-21843956 None:intergenic 50.0%
!! CAGCTTATCCTTTGGAGCAG+TGG - chr1_1:21843935-21843954 Msa0013970:intron 50.0%
! AAGTGTTGCCACTGCTCCAA+AGG + chr1_1:21843946-21843965 None:intergenic 50.0%
!! GCCCTGGTCTTGTTTCTGGT+GGG + chr1_1:21830255-21830274 None:intergenic 55.0%
!! TGCCCTGGTCTTGTTTCTGG+TGG + chr1_1:21830256-21830275 None:intergenic 55.0%
!! AAGCAACACAGGGCGTTGCT+AGG - chr1_1:21830935-21830954 Msa0013970:CDS 55.0%
CGTTGCTAGGACCCTAGATC+AGG - chr1_1:21830948-21830967 Msa0013970:CDS 55.0%
ACGGCCCTGCCCTCAAAATT+AGG + chr1_1:21831694-21831713 None:intergenic 55.0%
TCTTCGCCCTACCCCAGATA+CGG + chr1_1:21831713-21831732 None:intergenic 55.0%
! TATCTGGGGTAGGGCGAAGA+GGG - chr1_1:21831713-21831732 Msa0013970:intron 55.0%
! GAAGGTGCAATTGAACCCCC+TGG - chr1_1:21831980-21831999 Msa0013970:intron 55.0%
TGGAGGAGTGGCAACACTTG+TGG - chr1_1:21832276-21832295 Msa0013970:intron 55.0%
TCTTGCTAACCAGTGCCCTC+AGG - chr1_1:21832959-21832978 Msa0013970:intron 55.0%
CTTGCTAACCAGTGCCCTCA+GGG - chr1_1:21832960-21832979 Msa0013970:intron 55.0%
TGCCCTCAGGGCAATGGTTA+AGG - chr1_1:21832972-21832991 Msa0013970:intron 55.0%
AGCACGATGGCAGTGAAACC+AGG - chr1_1:21833280-21833299 Msa0013970:intron 55.0%
CAACATAGGCTACGCCTTGC+AGG - chr1_1:21834330-21834349 Msa0013970:intron 55.0%
GCGCTTGGCATCTCTATCCT+GGG + chr1_1:21834774-21834793 None:intergenic 55.0%
TAGTCCATGTGCTAGGCGCT+TGG + chr1_1:21834789-21834808 None:intergenic 55.0%
AAGCGCCTAGCACATGGACT+AGG - chr1_1:21834788-21834807 Msa0013970:intron 55.0%
GGATGCCTAGTCCATGTGCT+AGG + chr1_1:21834796-21834815 None:intergenic 55.0%
GACTAGGCATCCATGCACCT+AGG - chr1_1:21834804-21834823 Msa0013970:intron 55.0%
AAAGCCATGCCCTAGGTGCA+TGG + chr1_1:21834817-21834836 None:intergenic 55.0%
CTCTCACGCATTAGGCATGC+TGG - chr1_1:21834844-21834863 Msa0013970:intron 55.0%
CCCCGTGCATCTGAAAATGC+AGG - chr1_1:21834874-21834893 Msa0013970:intron 55.0%
CGGGGTTTGGGCTAAAAGTG+AGG + chr1_1:21834938-21834957 None:intergenic 55.0%
CCCTAGACGTAAGTACCCAG+TGG - chr1_1:21835426-21835445 Msa0013970:intron 55.0%
GCACCTAGCTGTCCGACTTA+AGG - chr1_1:21835519-21835538 Msa0013970:intron 55.0%
TCCCAAGGCAATGAAGGCCA+AGG + chr1_1:21835688-21835707 None:intergenic 55.0%
TTAGCAAGACCCCGCACGTA+AGG - chr1_1:21835754-21835773 Msa0013970:intron 55.0%
CATGTGCAGTTAGCCATCGG+AGG - chr1_1:21835793-21835812 Msa0013970:intron 55.0%
ACCCAGTGTACGATGCCCAT+TGG - chr1_1:21835833-21835852 Msa0013970:intron 55.0%
! CCCAATGGGCATCGTACACT+GGG + chr1_1:21835837-21835856 None:intergenic 55.0%
CCCAGTGTACGATGCCCATT+GGG - chr1_1:21835834-21835853 Msa0013970:intron 55.0%
! ACCCAATGGGCATCGTACAC+TGG + chr1_1:21835838-21835857 None:intergenic 55.0%
TGTACGATGCCCATTGGGTC+AGG - chr1_1:21835839-21835858 Msa0013970:intron 55.0%
GTTCTGACGGCTACCCTCAA+AGG + chr1_1:21836751-21836770 None:intergenic 55.0%
TCCGTGAGAGAAGCTCAGTG+TGG - chr1_1:21837317-21837336 Msa0013970:CDS 55.0%
GCTCAGTGTGGTTTAGGCGA+AGG - chr1_1:21837329-21837348 Msa0013970:CDS 55.0%
ACGTCGTTCACCACTCCATC+TGG + chr1_1:21837455-21837474 None:intergenic 55.0%
TGGAGTGGTGAACGACGTAG+TGG - chr1_1:21837457-21837476 Msa0013970:CDS 55.0%
GCTACATGGGAGTCAACCCA+TGG - chr1_1:21837746-21837765 Msa0013970:intron 55.0%
CTTAAGCTCGACGGTTCCCA+TGG + chr1_1:21837766-21837785 None:intergenic 55.0%
TCTCCGTCACGACGGTCAAT+AGG + chr1_1:21837818-21837837 None:intergenic 55.0%
CGGAGACGTTAATCATGCGC+TGG - chr1_1:21837832-21837851 Msa0013970:intron 55.0%
AGGGTGGCTTGAAAGGCTCT+AGG + chr1_1:21838366-21838385 None:intergenic 55.0%
! CCGTGAGGGATTTTACCTGC+GGG + chr1_1:21839825-21839844 None:intergenic 55.0%
CCCGCAGGTAAAATCCCTCA+CGG - chr1_1:21839822-21839841 Msa0013970:intron 55.0%
! CCCGTGAGGGATTTTACCTG+CGG + chr1_1:21839826-21839845 None:intergenic 55.0%
CCGCAGGTAAAATCCCTCAC+GGG - chr1_1:21839823-21839842 Msa0013970:intron 55.0%
GTACGGGGTGGGTAGCTAAA+CGG - chr1_1:21839845-21839864 Msa0013970:intron 55.0%
TACGGGGTGGGTAGCTAAAC+GGG - chr1_1:21839846-21839865 Msa0013970:intron 55.0%
GGTATGGGTACCCGTGGATA+TGG + chr1_1:21839944-21839963 None:intergenic 55.0%
TTATCCGGTATGGGTACCCG+TGG + chr1_1:21839950-21839969 None:intergenic 55.0%
! CGCGGCTATTGAGGTATCCA+TGG + chr1_1:21840678-21840697 None:intergenic 55.0%
TTATCCAACGGGACGGGAAC+GGG - chr1_1:21840752-21840771 Msa0013970:intron 55.0%
CTGGTCCCATGGAATTGTGG+TGG + chr1_1:21841764-21841783 None:intergenic 55.0%
AGGTCTGATTGCTGGTCCCA+TGG + chr1_1:21841775-21841794 None:intergenic 55.0%
TTCGGCAGTTAACTGCCGAG+GGG + chr1_1:21841967-21841986 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG + chr1_1:21842786-21842805 None:intergenic 55.0%
ACTTCGGCAGTTAACTGCCG+AGG - chr1_1:21841965-21841984 Msa0013970:intron 55.0%
ACTTCGGCAGTTAACTGCCG+AGG + chr1_1:21841965-21841984 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - chr1_1:21842786-21842805 Msa0013970:intron 55.0%
TTCGGCAGTTAACTGCCGAG+GGG - chr1_1:21841967-21841986 Msa0013970:intron 55.0%
GGTGGGAATACATAGTCCCC+AGG + chr1_1:21843440-21843459 None:intergenic 55.0%
TGGAGCAGTGGCAACACTTG+TGG - chr1_1:21843947-21843966 Msa0013970:intron 55.0%
TTTGAGGGCAGGGCCGTATC+TGG - chr1_1:21831697-21831716 Msa0013970:intron 60.0%
TTGAGGGCAGGGCCGTATCT+GGG - chr1_1:21831698-21831717 Msa0013970:intron 60.0%
! GTATCTGGGGTAGGGCGAAG+AGG - chr1_1:21831712-21831731 Msa0013970:intron 60.0%
AACCAGTGCCCTCAGGGCAA+TGG - chr1_1:21832966-21832985 Msa0013970:intron 60.0%
! AACCATTGCCCTGAGGGCAC+TGG + chr1_1:21832971-21832990 None:intergenic 60.0%
! GAAGGGCTGGGTTTGGAGTG+TGG - chr1_1:21834097-21834116 Msa0013970:intron 60.0%
GGCGCTTGGCATCTCTATCC+TGG + chr1_1:21834775-21834794 None:intergenic 60.0%
GATGCCAAGCGCCTAGCACA+TGG - chr1_1:21834782-21834801 Msa0013970:intron 60.0%
GCATCCATGCACCTAGGGCA+TGG - chr1_1:21834810-21834829 Msa0013970:intron 60.0%
GGGCAGACCTAAGGGAACCT+TGG - chr1_1:21835668-21835687 Msa0013970:intron 60.0%
CACGGTGATCCTTACGTGCG+GGG + chr1_1:21835766-21835785 None:intergenic 60.0%
GCACGGTGATCCTTACGTGC+GGG + chr1_1:21835767-21835786 None:intergenic 60.0%
CGCACGGTGATCCTTACGTG+CGG + chr1_1:21835768-21835787 None:intergenic 60.0%
ACGATGCCCATTGGGTCAGG+TGG - chr1_1:21835842-21835861 Msa0013970:intron 60.0%
! AGGGCACCACCTGACCCAAT+GGG + chr1_1:21835851-21835870 None:intergenic 60.0%
! TAGGGCACCACCTGACCCAA+TGG + chr1_1:21835852-21835871 None:intergenic 60.0%
ACCCACTATGCGGGTATCCG+CGG + chr1_1:21840696-21840715 None:intergenic 60.0%
CTCGTGGGTACCCACTATGC+GGG + chr1_1:21840705-21840724 None:intergenic 60.0%
CCTCGTGGGTACCCACTATG+CGG + chr1_1:21840706-21840725 None:intergenic 60.0%
!! CGCATAGTGGGTACCCACGA+GGG - chr1_1:21840704-21840723 Msa0013970:intron 60.0%
AGTGGGTACCCACGAGGGTA+CGG - chr1_1:21840709-21840728 Msa0013970:intron 60.0%
TCGGCAGTTAACTGCCGAGG+GGG + chr1_1:21841968-21841987 None:intergenic 60.0%
CCGGCTGCAGTTAACTACCG+AGG - chr1_1:21841906-21841925 Msa0013970:intron 60.0%
CCGGCTGCAGTTAACTACCG+AGG + chr1_1:21841906-21841925 None:intergenic 60.0%
TCGGCAGTTAACTGCCGAGG+GGG - chr1_1:21841968-21841987 Msa0013970:intron 60.0%
TGAGGGCAGGGCCGTATCTG+GGG - chr1_1:21831699-21831718 Msa0013970:intron 65.0%
! GCAGGGCCGTATCTGGGGTA+GGG - chr1_1:21831704-21831723 Msa0013970:intron 65.0%
CTGCGGGTACCCACGGACAT+GGG + chr1_1:21839809-21839828 None:intergenic 65.0%
AATCCCTCACGGGTACGGGG+TGG - chr1_1:21839833-21839852 Msa0013970:intron 65.0%
ATCCCTCACGGGTACGGGGT+GGG - chr1_1:21839834-21839853 Msa0013970:intron 65.0%
TACCCACCCCGTACCCGTGA+GGG + chr1_1:21839839-21839858 None:intergenic 65.0%
GCGGGTATCCGCGGCTATTG+AGG + chr1_1:21840687-21840706 None:intergenic 65.0%
AGCCGCGGATACCCGCATAG+TGG - chr1_1:21840691-21840710 Msa0013970:intron 65.0%
GCCGCGGATACCCGCATAGT+GGG - chr1_1:21840692-21840711 Msa0013970:intron 65.0%
!! CCGCATAGTGGGTACCCACG+AGG - chr1_1:21840703-21840722 Msa0013970:intron 65.0%
! GTACCCACGAGGGTACGGAG+CGG - chr1_1:21840714-21840733 Msa0013970:intron 65.0%
TGTCCGCTCCGTACCCTCGT+GGG + chr1_1:21840720-21840739 None:intergenic 65.0%
! ACGAGGGTACGGAGCGGACA+CGG - chr1_1:21840720-21840739 Msa0013970:intron 65.0%
GATACCCGTTCCCGTCCCGT+TGG + chr1_1:21840759-21840778 None:intergenic 65.0%
! GGCAGGGCCGTATCTGGGGT+AGG - chr1_1:21831703-21831722 Msa0013970:intron 70.0%
CCTGCGGGTACCCACGGACA+TGG + chr1_1:21839810-21839829 None:intergenic 70.0%
CCATGTCCGTGGGTACCCGC+AGG - chr1_1:21839807-21839826 Msa0013970:intron 70.0%
CTACCCACCCCGTACCCGTG+AGG + chr1_1:21839840-21839859 None:intergenic 70.0%
GTGTCCGCTCCGTACCCTCG+TGG + chr1_1:21840721-21840740 None:intergenic 70.0%
GCGAAGAGGGCGACCGCCCT+AGG - chr1_1:21831726-21831745 Msa0013970:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 21830187 21844181 21830187 ID=Msa0013970;Name=Msa0013970
chr1_1 mRNA 21830187 21844181 21830187 ID=Msa0013970-mRNA-1;Parent=Msa0013970;Name=Msa0013970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=6|0.5|0.42|1|0.83|0.85|7|133|655
chr1_1 exon 21830187 21830301 21830187 ID=Msa0013970-mRNA-1:exon:7708;Parent=Msa0013970-mRNA-1
chr1_1 exon 21830354 21830626 21830354 ID=Msa0013970-mRNA-1:exon:7707;Parent=Msa0013970-mRNA-1
chr1_1 exon 21830770 21830988 21830770 ID=Msa0013970-mRNA-1:exon:7706;Parent=Msa0013970-mRNA-1
chr1_1 exon 21836905 21837621 21836905 ID=Msa0013970-mRNA-1:exon:7705;Parent=Msa0013970-mRNA-1
chr1_1 exon 21840017 21840338 21840017 ID=Msa0013970-mRNA-1:exon:7704;Parent=Msa0013970-mRNA-1
chr1_1 exon 21842047 21842297 21842047 ID=Msa0013970-mRNA-1:exon:7703;Parent=Msa0013970-mRNA-1
chr1_1 exon 21843972 21844181 21843972 ID=Msa0013970-mRNA-1:exon:7702;Parent=Msa0013970-mRNA-1
chr1_1 five_prime_UTR 21844176 21844181 21844176 ID=Msa0013970-mRNA-1:five_prime_utr;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21843972 21844175 21843972 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21842047 21842297 21842047 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21840017 21840338 21840017 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21836905 21837621 21836905 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21830770 21830988 21830770 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 CDS 21830372 21830626 21830372 ID=Msa0013970-mRNA-1:cds;Parent=Msa0013970-mRNA-1
chr1_1 three_prime_UTR 21830354 21830371 21830354 ID=Msa0013970-mRNA-1:three_prime_utr;Parent=Msa0013970-mRNA-1
chr1_1 three_prime_UTR 21830187 21830301 21830187 ID=Msa0013970-mRNA-1:three_prime_utr;Parent=Msa0013970-mRNA-1
Gene Sequence

>Msa0013970

ATGGAGAAATTTATTTCAAACCGGTCAAGCATCAAATCTGTGCCTGAGGACTATGTATTCCCACCAGAAACAAGACCAGGGCATTTCAAAATCGCAATCAACAAAACCATCCCAATAATTGATCTTAGTGAAGCACAAAATGGGGATAGAACCAAATCAATTCAACAAATTATCAAGGCTGCTGAGGAGTTTGGATTCTTTCAGGTTATCAATCATGGTCTCTCGTTGGATGAAATGAAGGAAACAATGAGTGTTTTTAAGGAGGTGTTTGAGAAGCCTAATGAATACAAGCACGACTTGTATCCTGAGGACAATTTGAAGACATGTAAGATGTTTTCTAGCACTTTCAAATATGAATTTGATAAGGTTCATCTATGGAGGGACACTCTTAGACACCCAGCTTATCCTTTGGAGGAGTGGCAACACTTGTGGCCTGAATATCCAACTACATACAGAGAGTGTGTTGGGGATTATTCAACTAAAATTAAGGAGTTGGGTTCAAGGATCATGAATTTGATTAGTGAAGGGCTGGGTTTGGAGTGTGGATATTTCGACAATGATAATCTTAGTGATTCATTGGTTATCCAACTTAATCATTATCCACCATGCCCTGATCCAAGTTTAACACTTGGTATAACCAAACACTTTGATGCTTACCTCATCACCGTTTTACAACAAGAAGATATATGTGGGCTTCAAGTACTTAAGGATGGAGAGTGGATTGCTGTTGATGCTATTCCTCATGCATTTGTTATCAACATAGGCTACGCCTTGCAGTCCTTTGAGGGTAGCCGTCAGAACGACACTTCATTAAGTGTTAAGTCAAGCGGACTCAATGAAAGCGGGCTAACAATCTCTCAAACTGCACACTCAGTCCCTCTACCTCATATTCATCTTTCTACTTGGACAATAGGACAAGAGCAGGATAAAATGGAAAATACCCCGAACAAATCCTCCCCTGAAACTGTAGTACAAGAGACTGTTGGATACATTTGTACTGAAATCAAGAAAGGAGAACAATGTGACCACTTGTCGGAAACTCATCTTAAGAAGGAAGAAGCGCTAGGAGTGCAATCAACACTTCAAGCCCAGTTCAAAGAGAAGCAGAATACCCCAATATTCGAGCCTATTGTCGACAAAGATTCCATTTTAAGAATGAGTAGACGACAAATTCTTGATGAAAGTGAGAACCTTTACAGACTCCCTAACTTTAGCAAGTTGTCGTATTCCCAGAAGTTGAAGAGAAAAGACCTGACTGCATTTTCCGGAAGCTGTAAGGAAATATTTCAAGGACGGTTACCTCTAAAGAAGAAGGACCCTGGAAGTTTCAATTCTATTGGGAAGCTGTCCGTGAGAGAAGCTCAGTGTGGTTTAGGCGAAGGCATGAACTTGACTCCAACATGGCTGATAGAAAATCTCGAAAGTATTCTAGCACAACCATCAACTGTCAATCTAACAATTGCAGAAGGATCAATCAAAAATCCAGATGGAGTGGTACTTCAAGGGGATATGGAGAAATTTGTTTCAAACCGGTCAAGCATCAAATCTGTGCCTGGGGACTATGTATTCCCACCAGAAACAAGACCAGGGAATTTCAAAATCCCAATCAACAAAACCATCCCAATAATTGATCTTAGTGAAGCACAAAATGGTGATAGATCCAACACAATTCAACAAATTATCAAGGCTGCTGAGGAGTTTGGATTCTTTCAGGTTATCAATCATGGTCTCTCGTTGGATGAAATGAAGGAAACAATGAGCATTTTTAAGGAAGTGTTTGAGAAGCCTAATGAGTACAAGCACGACTTGTATCCTGATGACATTTTGAAGACATGCAAGATGTTTTCCAGCACCTTGAAATATGAATCTGATAAGGTTCATCTATGGAGGGACTCTCTTAGACACCCAGCTTATCCTTTGGAGCAGTGGCAACACTTGTGGCCTGAATATCCAACTACATACAGGTAA
Protein sequence

>Msa0013970

MEKFISNRSSIKSVPEDYVFPPETRPGHFKIAINKTIPIIDLSEAQNGDRTKSIQQIIKAAEEFGFFQVINHGLSLDEMKETMSVFKEVFEKPNEYKHDLYPEDNLKTCKMFSSTFKYEFDKVHLWRDTLRHPAYPLEEWQHLWPEYPTTYRECVGDYSTKIKELGSRIMNLISEGLGLECGYFDNDNLSDSLVIQLNHYPPCPDPSLTLGITKHFDAYLITVLQQEDICGLQVLKDGEWIAVDAIPHAFVINIGYALQSFEGSRQNDTSLSVKSSGLNESGLTISQTAHSVPLPHIHLSTWTIGQEQDKMENTPNKSSPETVVQETVGYICTEIKKGEQCDHLSETHLKKEEALGVQSTLQAQFKEKQNTPIFEPIVDKDSILRMSRRQILDESENLYRLPNFSKLSYSQKLKRKDLTAFSGSCKEIFQGRLPLKKKDPGSFNSIGKLSVREAQCGLGEGMNLTPTWLIENLESILAQPSTVNLTIAEGSIKNPDGVVLQGDMEKFVSNRSSIKSVPGDYVFPPETRPGNFKIPINKTIPIIDLSEAQNGDRSNTIQQIIKAAEEFGFFQVINHGLSLDEMKETMSIFKEVFEKPNEYKHDLYPDDILKTCKMFSSTLKYESDKVHLWRDSLRHPAYPLEQWQHLWPEYPTTYR*