Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088320 | XP_003601618.1 | 95.845 | 361 | 15 | 0 | 1 | 361 | 1 | 361 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088320 | sp|Q9T003|ASMT_ARATH | 54.930 | 355 | 146 | 5 | 19 | 359 | 25 | 379 | 1.75e-125 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088320 | G7JA41 | 95.845 | 361 | 15 | 0 | 1 | 361 | 1 | 361 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa1088320 | 0.841991 | 3.396777e-58 | -8.615850e-47 |
| Msa0013270 | Msa1088320 | 0.819501 | 1.123874e-52 | -8.615850e-47 |
| Msa0013970 | Msa1088320 | 0.813588 | 2.372887e-51 | -8.615850e-47 |
| Msa0038530 | Msa1088320 | 0.802504 | 5.436194e-49 | -8.615850e-47 |
| Msa0045810 | Msa1088320 | 0.862189 | 6.044333e-64 | -8.615850e-47 |
| Msa0046200 | Msa1088320 | 0.820336 | 7.239961e-53 | -8.615850e-47 |
| Msa0106540 | Msa1088320 | 0.803572 | 3.269722e-49 | -8.615850e-47 |
| Msa0610700 | Msa1088320 | -0.801553 | 8.529639e-49 | -8.615850e-47 |
| Msa0612350 | Msa1088320 | 0.818446 | 1.951519e-52 | -8.615850e-47 |
| Msa0618680 | Msa1088320 | 0.817075 | 3.979576e-52 | -8.615850e-47 |
| Msa0618700 | Msa1088320 | 0.832739 | 7.959377e-56 | -8.615850e-47 |
| Msa0646010 | Msa1088320 | 0.817790 | 2.746507e-52 | -8.615850e-47 |
| Msa0646430 | Msa1088320 | 0.820803 | 5.654454e-53 | -8.615850e-47 |
| Msa0657710 | Msa1088320 | 0.801205 | 1.004989e-48 | -8.615850e-47 |
| Msa0662840 | Msa1088320 | 0.804205 | 2.415982e-49 | -8.615850e-47 |
| Msa0682110 | Msa1088320 | 0.815573 | 8.624420e-52 | -8.615850e-47 |
| Msa0682160 | Msa1088320 | 0.809407 | 1.921745e-50 | -8.615850e-47 |
| Msa0686040 | Msa1088320 | 0.816638 | 4.989012e-52 | -8.615850e-47 |
| Msa0687580 | Msa1088320 | 0.823540 | 1.311399e-53 | -8.615850e-47 |
| Msa0701660 | Msa1088320 | 0.800055 | 1.724148e-48 | -8.615850e-47 |
| Msa0702800 | Msa1088320 | 0.809259 | 2.066777e-50 | -8.615850e-47 |
| Msa0783850 | Msa1088320 | 0.801822 | 7.509170e-49 | -8.615850e-47 |
| Msa0828960 | Msa1088320 | 0.811528 | 6.691432e-51 | -8.615850e-47 |
| Msa0838620 | Msa1088320 | -0.827963 | 1.169967e-54 | -8.615850e-47 |
| Msa0139500 | Msa1088320 | 0.856472 | 3.145054e-62 | -8.615850e-47 |
| Msa0143590 | Msa1088320 | 0.812033 | 5.197516e-51 | -8.615850e-47 |
| Msa0173250 | Msa1088320 | 0.800463 | 1.424733e-48 | -8.615850e-47 |
| Msa0177320 | Msa1088320 | 0.807507 | 4.887811e-50 | -8.615850e-47 |
| Msa0183710 | Msa1088320 | 0.819887 | 9.169912e-53 | -8.615850e-47 |
| Msa0189650 | Msa1088320 | 0.803864 | 2.844392e-49 | -8.615850e-47 |
| Msa0189720 | Msa1088320 | 0.813628 | 2.324192e-51 | -8.615850e-47 |
| Msa0206370 | Msa1088320 | 0.804112 | 2.525325e-49 | -8.615850e-47 |
| Msa0232100 | Msa1088320 | 0.810729 | 9.973144e-51 | -8.615850e-47 |
| Msa0386540 | Msa1088320 | 0.804384 | 2.216576e-49 | -8.615850e-47 |
| Msa0386560 | Msa1088320 | 0.817456 | 3.266397e-52 | -8.615850e-47 |
| Msa0386880 | Msa1088320 | 0.809378 | 1.948836e-50 | -8.615850e-47 |
| Msa0386910 | Msa1088320 | 0.800007 | 1.763849e-48 | -8.615850e-47 |
| Msa0387930 | Msa1088320 | 0.998882 | 2.615227e-280 | -8.615850e-47 |
| Msa0412560 | Msa1088320 | 0.803167 | 3.965991e-49 | -8.615850e-47 |
| Msa0420920 | Msa1088320 | 0.806317 | 8.724848e-50 | -8.615850e-47 |
| Msa0437480 | Msa1088320 | 0.849011 | 4.252357e-60 | -8.615850e-47 |
| Msa0437520 | Msa1088320 | 0.808633 | 2.813821e-50 | -8.615850e-47 |
| Msa0440350 | Msa1088320 | 0.851667 | 7.645244e-61 | -8.615850e-47 |
| Msa0479420 | Msa1088320 | 0.806188 | 9.287529e-50 | -8.615850e-47 |
| Msa1013190 | Msa1088320 | 0.815280 | 1.002256e-51 | -8.615850e-47 |
| Msa1029820 | Msa1088320 | 0.827347 | 1.645226e-54 | -8.615850e-47 |
| Msa1041060 | Msa1088320 | 0.815745 | 7.899532e-52 | -8.615850e-47 |
| Msa1044250 | Msa1088320 | 0.808091 | 3.671619e-50 | -8.615850e-47 |
| Msa1068940 | Msa1088320 | 0.836992 | 6.759415e-57 | -8.615850e-47 |
| Msa1081970 | Msa1088320 | 0.803882 | 2.819633e-49 | -8.615850e-47 |
| Msa1082410 | Msa1088320 | 0.845663 | 3.528360e-59 | -8.615850e-47 |
| Msa1088320 | Msa1088470 | 0.801325 | 9.495642e-49 | -8.615850e-47 |
| Msa1088320 | Msa1106590 | 0.802946 | 4.407100e-49 | -8.615850e-47 |
| Msa1088320 | Msa1132990 | 0.820209 | 7.741104e-53 | -8.615850e-47 |
| Msa1088320 | Msa1147700 | 0.802996 | 4.303216e-49 | -8.615850e-47 |
| Msa1088320 | Msa1156710 | 0.828586 | 8.280840e-55 | -8.615850e-47 |
| Msa1088320 | Msa1165460 | 0.830760 | 2.449190e-55 | -8.615850e-47 |
| Msa1088320 | Msa1179660 | 0.823262 | 1.522396e-53 | -8.615850e-47 |
| Msa1088320 | Msa1203440 | 0.811714 | 6.096399e-51 | -8.615850e-47 |
| Msa1088320 | Msa1206920 | 0.838005 | 3.718369e-57 | -8.615850e-47 |
| Msa1088320 | Msa1232680 | 0.803663 | 3.130598e-49 | -8.615850e-47 |
| Msa1088320 | Msa1240490 | 0.830288 | 3.194724e-55 | -8.615850e-47 |
| Msa1088320 | Msa1253520 | 0.822221 | 2.659507e-53 | -8.615850e-47 |
| Msa1088320 | Msa1255690 | 0.815168 | 1.061641e-51 | -8.615850e-47 |
| Msa1088320 | Msa1257200 | 0.846007 | 2.846399e-59 | -8.615850e-47 |
| Msa1088320 | Msa1275160 | 0.806220 | 9.142321e-50 | -8.615850e-47 |
| Msa1088320 | Msa1281780 | 0.837175 | 6.069878e-57 | -8.615850e-47 |
| Msa1088320 | Msa1284020 | 0.818060 | 2.387469e-52 | -8.615850e-47 |
| Msa1088320 | Msa1306820 | 0.809949 | 1.469679e-50 | -8.615850e-47 |
| Msa1088320 | Msa1321010 | 0.822744 | 2.010995e-53 | -8.615850e-47 |
| Msa1088320 | Msa1322960 | 0.804120 | 2.515494e-49 | -8.615850e-47 |
| Msa1088320 | Msa1323070 | 0.842795 | 2.079416e-58 | -8.615850e-47 |
| Msa1088320 | Msa1365820 | 0.813031 | 3.143891e-51 | -8.615850e-47 |
| Msa1088320 | Msa1368390 | 0.813654 | 2.294538e-51 | -8.615850e-47 |
| Msa1088320 | Msa1368420 | 0.801930 | 7.138018e-49 | -8.615850e-47 |
| Msa1088320 | Msa1381010 | 0.829646 | 4.580879e-55 | -8.615850e-47 |
| Msa1088320 | Msa1381030 | 0.812084 | 5.065124e-51 | -8.615850e-47 |
| Msa1088320 | Msa1383220 | 0.804890 | 1.738779e-49 | -8.615850e-47 |
| Msa1088320 | Msa1383820 | 0.824340 | 8.513613e-54 | -8.615850e-47 |
| Msa1088320 | Msa1402010 | 0.812584 | 3.939170e-51 | -8.615850e-47 |
| Msa1088320 | Msa1405830 | 0.800405 | 1.463441e-48 | -8.615850e-47 |
| Msa1088320 | Msa1407810 | 0.824623 | 7.301872e-54 | -8.615850e-47 |
| Msa1088320 | Msa1413130 | 0.805243 | 1.466531e-49 | -8.615850e-47 |
| Msa1088320 | Msa1422740 | 0.806401 | 8.374418e-50 | -8.615850e-47 |
| Msa1088320 | Msa1433360 | 0.836042 | 1.179456e-56 | -8.615850e-47 |
| Msa1088320 | Msa1437780 | 0.824215 | 9.107081e-54 | -8.615850e-47 |
| Msa1088320 | Msa1439250 | 0.833782 | 4.374903e-56 | -8.615850e-47 |
| Msa1088320 | Msa1440430 | 0.813979 | 1.945526e-51 | -8.615850e-47 |
| Msa1088320 | Msa1445530 | 0.806357 | 8.557133e-50 | -8.615850e-47 |
| Msa1088320 | Msa1447100 | 0.816101 | 6.578405e-52 | -8.615850e-47 |
| Msa1088320 | Msa1449900 | 0.803283 | 3.754016e-49 | -8.615850e-47 |
| Msa1088320 | Msa1455360 | 0.802044 | 6.760495e-49 | -8.615850e-47 |
| Msa1088320 | Msa1464880 | 0.806953 | 6.404380e-50 | -8.615850e-47 |
| Msa0276860 | Msa1088320 | 0.805809 | 1.115684e-49 | -8.615850e-47 |
| Msa0310130 | Msa1088320 | 0.808939 | 2.420024e-50 | -8.615850e-47 |
| Msa0318490 | Msa1088320 | 0.835683 | 1.454472e-56 | -8.615850e-47 |
| Msa0326710 | Msa1088320 | 0.835775 | 1.378655e-56 | -8.615850e-47 |
| Msa0354840 | Msa1088320 | 0.851480 | 8.634289e-61 | -8.615850e-47 |
| Msa0484210 | Msa1088320 | -0.825891 | 3.660526e-54 | -8.615850e-47 |
| Msa0523110 | Msa1088320 | 0.814383 | 1.584245e-51 | -8.615850e-47 |
| Msa0523550 | Msa1088320 | 0.828858 | 7.117780e-55 | -8.615850e-47 |
| Msa0537760 | Msa1088320 | 0.800810 | 1.210055e-48 | -8.615850e-47 |
| Msa0549960 | Msa1088320 | 0.800590 | 1.341800e-48 | -8.615850e-47 |
| Msa0563870 | Msa1088320 | 0.803057 | 4.180292e-49 | -8.615850e-47 |
| Msa0565700 | Msa1088320 | 0.838397 | 2.947206e-57 | -8.615850e-47 |
| Msa0567330 | Msa1088320 | 0.830512 | 2.816693e-55 | -8.615850e-47 |
| Msa0567570 | Msa1088320 | 0.803094 | 4.107367e-49 | -8.615850e-47 |
| Msa0576320 | Msa1088320 | 0.822590 | 2.183818e-53 | -8.615850e-47 |
| Msa0577480 | Msa1088320 | 0.804585 | 2.013355e-49 | -8.615850e-47 |
| Msa0577790 | Msa1088320 | 0.804346 | 2.257813e-49 | -8.615850e-47 |
| Msa0842750 | Msa1088320 | 0.807816 | 4.202270e-50 | -8.615850e-47 |
| Msa0865420 | Msa1088320 | 0.803890 | 2.809527e-49 | -8.615850e-47 |
| Msa0880910 | Msa1088320 | 0.838344 | 3.041295e-57 | -8.615850e-47 |
| Msa0967780 | Msa1088320 | 0.852444 | 4.598291e-61 | -8.615850e-47 |
| Msa0968180 | Msa1088320 | 0.834391 | 3.079200e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088320 | MtrunA17_Chr3g0121301 | 95.845 | 361 | 15 | 0 | 1 | 361 | 1 | 361 | 0.0 | 714 |
| Msa1088320 | MtrunA17_Chr4g0022021 | 42.045 | 352 | 193 | 5 | 15 | 359 | 19 | 366 | 5.18e-96 | 290 |
| Msa1088320 | MtrunA17_Chr4g0021981 | 39.773 | 352 | 201 | 5 | 15 | 359 | 19 | 366 | 3.81e-91 | 278 |
| Msa1088320 | MtrunA17_Chr5g0432301 | 38.462 | 351 | 209 | 4 | 13 | 357 | 7 | 356 | 8.52e-82 | 253 |
| Msa1088320 | MtrunA17_Chr5g0432241 | 37.110 | 353 | 215 | 4 | 11 | 357 | 5 | 356 | 6.20e-81 | 251 |
| Msa1088320 | MtrunA17_Chr5g0432251 | 37.719 | 342 | 206 | 4 | 22 | 357 | 15 | 355 | 2.06e-80 | 249 |
| Msa1088320 | MtrunA17_Chr1g0188391 | 36.620 | 355 | 210 | 8 | 16 | 359 | 9 | 359 | 9.50e-76 | 238 |
| Msa1088320 | MtrunA17_Chr7g0223241 | 36.648 | 352 | 208 | 8 | 12 | 357 | 4 | 346 | 1.54e-73 | 232 |
| Msa1088320 | MtrunA17_Chr1g0188371 | 37.941 | 340 | 195 | 11 | 13 | 341 | 6 | 340 | 4.37e-71 | 226 |
| Msa1088320 | MtrunA17_Chr7g0223231 | 35.588 | 340 | 206 | 7 | 23 | 357 | 15 | 346 | 2.05e-70 | 224 |
| Msa1088320 | MtrunA17_Chr5g0432211 | 37.830 | 341 | 193 | 6 | 22 | 357 | 15 | 341 | 2.78e-70 | 223 |
| Msa1088320 | MtrunA17_Chr4g0040621 | 37.609 | 343 | 202 | 7 | 22 | 357 | 28 | 365 | 3.08e-70 | 224 |
| Msa1088320 | MtrunA17_Chr3g0128011 | 39.394 | 330 | 185 | 10 | 39 | 358 | 89 | 413 | 2.39e-67 | 218 |
| Msa1088320 | MtrunA17_Chr4g0046531 | 38.438 | 333 | 195 | 7 | 19 | 345 | 12 | 340 | 4.49e-67 | 224 |
| Msa1088320 | MtrunA17_Chr4g0046531 | 37.391 | 345 | 206 | 7 | 19 | 357 | 374 | 714 | 5.68e-66 | 221 |
| Msa1088320 | MtrunA17_Chr5g0448091 | 38.177 | 351 | 192 | 11 | 14 | 345 | 3 | 347 | 5.81e-67 | 215 |
| Msa1088320 | MtrunA17_Chr4g0046361 | 36.158 | 354 | 209 | 9 | 16 | 357 | 9 | 357 | 1.07e-66 | 214 |
| Msa1088320 | MtrunA17_Chr5g0432261 | 34.503 | 342 | 189 | 6 | 22 | 357 | 11 | 323 | 1.26e-64 | 208 |
| Msa1088320 | MtrunA17_Chr7g0219161 | 34.139 | 331 | 207 | 6 | 22 | 345 | 15 | 341 | 4.53e-63 | 205 |
| Msa1088320 | MtrunA17_Chr7g0219141 | 34.402 | 343 | 214 | 7 | 22 | 357 | 15 | 353 | 9.51e-63 | 204 |
| Msa1088320 | MtrunA17_Chr7g0276411 | 35.613 | 351 | 207 | 10 | 6 | 344 | 2 | 345 | 1.90e-62 | 203 |
| Msa1088320 | MtrunA17_Chr8g0367451 | 36.932 | 352 | 203 | 9 | 5 | 344 | 15 | 359 | 2.28e-62 | 204 |
| Msa1088320 | MtrunA17_Chr8g0367441 | 36.337 | 344 | 200 | 9 | 11 | 342 | 22 | 358 | 6.95e-62 | 202 |
| Msa1088320 | MtrunA17_Chr4g0014641 | 36.441 | 354 | 210 | 9 | 16 | 357 | 9 | 359 | 2.81e-60 | 198 |
| Msa1088320 | MtrunA17_Chr4g0014561 | 36.441 | 354 | 210 | 9 | 16 | 357 | 9 | 359 | 2.28e-59 | 196 |
| Msa1088320 | MtrunA17_Chr4g0014681 | 36.441 | 354 | 210 | 9 | 16 | 357 | 9 | 359 | 2.70e-59 | 195 |
| Msa1088320 | MtrunA17_Chr8g0367491 | 36.478 | 318 | 186 | 8 | 39 | 344 | 46 | 359 | 4.84e-59 | 195 |
| Msa1088320 | MtrunA17_Chr4g0046341 | 35.574 | 357 | 210 | 10 | 16 | 357 | 9 | 360 | 8.23e-58 | 191 |
| Msa1088320 | MtrunA17_Chr8g0367501 | 35.669 | 314 | 186 | 8 | 43 | 344 | 37 | 346 | 4.21e-56 | 189 |
| Msa1088320 | MtrunA17_Chr7g0276401 | 33.708 | 356 | 219 | 10 | 13 | 358 | 22 | 370 | 1.60e-55 | 186 |
| Msa1088320 | MtrunA17_Chr7g0218271 | 34.969 | 326 | 192 | 8 | 38 | 347 | 39 | 360 | 3.99e-55 | 185 |
| Msa1088320 | MtrunA17_Chr8g0367381 | 34.524 | 336 | 184 | 9 | 5 | 329 | 16 | 326 | 1.16e-54 | 182 |
| Msa1088320 | MtrunA17_Chr7g0218301 | 34.268 | 321 | 191 | 8 | 38 | 342 | 39 | 355 | 2.65e-52 | 177 |
| Msa1088320 | MtrunA17_Chr4g0014661 | 36.286 | 350 | 210 | 8 | 16 | 357 | 9 | 353 | 4.97e-52 | 176 |
| Msa1088320 | MtrunA17_Chr8g0345851 | 37.959 | 245 | 147 | 5 | 101 | 344 | 33 | 273 | 6.99e-52 | 174 |
| Msa1088320 | MtrunA17_Chr4g0011691 | 77.570 | 107 | 24 | 0 | 1 | 107 | 1 | 107 | 1.93e-51 | 171 |
| Msa1088320 | MtrunA17_Chr4g0011691 | 50.244 | 205 | 77 | 6 | 178 | 361 | 36 | 236 | 2.50e-51 | 171 |
| Msa1088320 | MtrunA17_Chr7g0218181 | 34.177 | 316 | 190 | 10 | 38 | 342 | 39 | 347 | 2.50e-50 | 172 |
| Msa1088320 | MtrunA17_Chr7g0218131 | 35.202 | 321 | 193 | 9 | 38 | 347 | 39 | 355 | 8.96e-50 | 171 |
| Msa1088320 | MtrunA17_Chr7g0218211 | 31.646 | 316 | 201 | 7 | 38 | 342 | 38 | 349 | 2.31e-49 | 169 |
| Msa1088320 | MtrunA17_Chr7g0218261 | 33.438 | 320 | 199 | 8 | 38 | 347 | 38 | 353 | 3.16e-49 | 169 |
| Msa1088320 | MtrunA17_Chr1g0200491 | 31.105 | 344 | 220 | 7 | 17 | 347 | 18 | 357 | 1.59e-48 | 167 |
| Msa1088320 | MtrunA17_Chr4g0014591 | 34.957 | 349 | 216 | 7 | 16 | 357 | 9 | 353 | 4.39e-48 | 166 |
| Msa1088320 | MtrunA17_Chr1g0163601 | 40.196 | 204 | 118 | 3 | 149 | 352 | 160 | 359 | 8.53e-48 | 166 |
| Msa1088320 | MtrunA17_Chr2g0307521 | 32.704 | 318 | 200 | 7 | 38 | 345 | 33 | 346 | 1.74e-46 | 162 |
| Msa1088320 | MtrunA17_Chr3g0085201 | 34.062 | 320 | 192 | 8 | 38 | 345 | 28 | 340 | 6.22e-46 | 160 |
| Msa1088320 | MtrunA17_Chr1g0163611 | 39.196 | 199 | 117 | 3 | 149 | 347 | 160 | 354 | 1.11e-45 | 160 |
| Msa1088320 | MtrunA17_Chr3g0085211 | 34.796 | 319 | 191 | 10 | 38 | 345 | 41 | 353 | 3.79e-45 | 159 |
| Msa1088320 | MtrunA17_Chr1g0163621 | 37.559 | 213 | 128 | 4 | 134 | 345 | 158 | 366 | 3.69e-44 | 156 |
| Msa1088320 | MtrunA17_Chr3g0130011 | 29.345 | 351 | 231 | 11 | 18 | 357 | 10 | 354 | 2.19e-38 | 140 |
| Msa1088320 | MtrunA17_Chr2g0314271 | 31.304 | 345 | 218 | 11 | 11 | 345 | 3 | 338 | 1.36e-37 | 138 |
| Msa1088320 | MtrunA17_Chr6g0482291 | 41.765 | 170 | 88 | 4 | 175 | 344 | 1 | 159 | 3.95e-37 | 132 |
| Msa1088320 | MtrunA17_Chr3g0130061 | 28.571 | 336 | 229 | 7 | 18 | 345 | 10 | 342 | 5.33e-36 | 134 |
| Msa1088320 | MtrunA17_Chr4g0014601 | 32.184 | 261 | 168 | 5 | 10 | 264 | 3 | 260 | 2.07e-34 | 127 |
| Msa1088320 | MtrunA17_Chr8g0367401 | 44.545 | 110 | 60 | 1 | 152 | 261 | 2 | 110 | 1.03e-26 | 103 |
| Msa1088320 | MtrunA17_Chr7g0219171 | 38.168 | 131 | 76 | 4 | 229 | 357 | 117 | 244 | 1.38e-23 | 98.2 |
| Msa1088320 | MtrunA17_Chr1g0170941 | 53.968 | 63 | 29 | 0 | 194 | 256 | 11 | 73 | 5.81e-19 | 80.5 |
| Msa1088320 | MtrunA17_Chr8g0367461 | 40.206 | 97 | 56 | 2 | 248 | 344 | 1 | 95 | 5.83e-18 | 79.0 |
| Msa1088320 | MtrunA17_Chr8g0367391 | 38.679 | 106 | 58 | 3 | 239 | 344 | 19 | 117 | 1.10e-15 | 73.2 |
| Msa1088320 | MtrunA17_Chr8g0367421 | 34.545 | 110 | 54 | 2 | 152 | 261 | 2 | 93 | 3.15e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088320 | AT4G35160.1 | 54.930 | 355 | 146 | 5 | 19 | 359 | 25 | 379 | 1.78e-126 | 369 |
| Msa1088320 | AT4G35150.1 | 49.284 | 349 | 132 | 3 | 19 | 359 | 11 | 322 | 4.42e-115 | 337 |
| Msa1088320 | AT5G54160.1 | 38.291 | 316 | 183 | 7 | 40 | 347 | 36 | 347 | 5.54e-68 | 218 |
| Msa1088320 | AT1G77520.1 | 33.429 | 347 | 211 | 8 | 13 | 342 | 19 | 362 | 8.35e-61 | 200 |
| Msa1088320 | AT1G33030.1 | 36.306 | 314 | 186 | 9 | 39 | 342 | 22 | 331 | 2.52e-54 | 182 |
| Msa1088320 | AT1G51990.1 | 32.492 | 317 | 199 | 8 | 39 | 343 | 31 | 344 | 2.10e-50 | 172 |
| Msa1088320 | AT1G51990.2 | 32.177 | 317 | 200 | 8 | 39 | 343 | 31 | 344 | 8.56e-50 | 171 |
| Msa1088320 | AT1G63140.2 | 32.853 | 347 | 213 | 7 | 13 | 342 | 19 | 362 | 6.53e-47 | 164 |
| Msa1088320 | AT1G63140.4 | 33.333 | 348 | 210 | 9 | 13 | 342 | 39 | 382 | 7.95e-47 | 164 |
| Msa1088320 | AT5G53810.1 | 33.540 | 322 | 193 | 7 | 39 | 342 | 41 | 359 | 2.74e-46 | 162 |
| Msa1088320 | AT1G77530.1 | 32.853 | 347 | 213 | 8 | 13 | 342 | 19 | 362 | 1.29e-45 | 160 |
| Msa1088320 | AT1G21130.1 | 33.540 | 322 | 188 | 9 | 39 | 342 | 41 | 354 | 8.34e-43 | 153 |
| Msa1088320 | AT1G21100.1 | 33.851 | 322 | 187 | 9 | 39 | 342 | 41 | 354 | 9.16e-43 | 152 |
| Msa1088320 | AT1G21110.1 | 32.919 | 322 | 190 | 9 | 39 | 342 | 41 | 354 | 6.13e-42 | 150 |
| Msa1088320 | AT3G53140.1 | 33.333 | 318 | 197 | 7 | 40 | 345 | 29 | 343 | 7.73e-42 | 150 |
| Msa1088320 | AT1G21120.1 | 33.230 | 322 | 189 | 9 | 39 | 342 | 41 | 354 | 3.08e-41 | 149 |
| Msa1088320 | AT1G21120.2 | 33.230 | 322 | 189 | 9 | 39 | 342 | 89 | 402 | 8.67e-41 | 149 |
| Msa1088320 | AT5G37170.2 | 37.321 | 209 | 120 | 5 | 153 | 357 | 29 | 230 | 2.07e-40 | 142 |
| Msa1088320 | AT5G37170.1 | 37.321 | 209 | 120 | 5 | 153 | 357 | 129 | 330 | 6.65e-40 | 144 |
| Msa1088320 | AT5G37170.3 | 41.765 | 170 | 94 | 3 | 192 | 357 | 14 | 182 | 1.69e-39 | 139 |
| Msa1088320 | AT1G62900.1 | 41.398 | 186 | 107 | 2 | 157 | 342 | 3 | 186 | 4.65e-38 | 135 |
| Msa1088320 | AT1G76790.1 | 35.531 | 273 | 164 | 7 | 75 | 342 | 81 | 346 | 2.30e-35 | 133 |
| Msa1088320 | AT1G33030.2 | 34.335 | 233 | 141 | 7 | 39 | 261 | 22 | 252 | 1.58e-30 | 117 |
| Msa1088320 | AT1G33030.3 | 34.335 | 233 | 141 | 7 | 39 | 261 | 22 | 252 | 3.28e-30 | 117 |
| Msa1088320 | AT1G63140.1 | 30.337 | 267 | 165 | 8 | 13 | 261 | 39 | 302 | 1.94e-22 | 96.7 |
| Msa1088320 | AT1G21130.2 | 31.950 | 241 | 139 | 8 | 39 | 261 | 41 | 274 | 5.62e-19 | 86.7 |
| Msa1088320 | AT1G63140.3 | 26.877 | 253 | 164 | 8 | 13 | 247 | 39 | 288 | 2.69e-12 | 67.0 |
| Msa1088320 | AT1G77530.2 | 26.721 | 247 | 162 | 7 | 13 | 242 | 19 | 263 | 7.73e-11 | 62.4 |
Find 95 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTATTTGAATATATTT+AGG | 0.171444 | 7_3:-1372831 | None:intergenic |
| GAAATATGGAAGTACATATT+TGG | 0.241710 | 7_3:+1368561 | Msa1088320:CDS |
| AATAATTATAATAAATAAAA+AGG | 0.249775 | 7_3:+1368348 | Msa1088320:five_prime_UTR |
| CTCTACAGTTCTTCAAGATT+TGG | 0.267072 | 7_3:-1372280 | None:intergenic |
| GTTTGATGGTGTTGGATCTT+TGG | 0.282207 | 7_3:+1369064 | Msa1088320:CDS |
| TTGATTGTGTAGACCATATT+TGG | 0.288724 | 7_3:+1372779 | Msa1088320:three_prime_UTR |
| TTTATCGTTTATACCAAATA+TGG | 0.294337 | 7_3:-1372792 | None:intergenic |
| CACAAGCTCAAGTAGAAATA+TGG | 0.297505 | 7_3:+1368547 | Msa1088320:CDS |
| GAAGCAATTCCAAAAGAAAA+TGG | 0.298606 | 7_3:+1372302 | Msa1088320:CDS |
| AGCTGATGCTGCAATTATTA+AGG | 0.313673 | 7_3:+1369247 | Msa1088320:CDS |
| GTCGTCATGGTTGGTATTCA+TGG | 0.315701 | 7_3:-1368754 | None:intergenic |
| ACCATCGAAATATATAAATT+AGG | 0.316801 | 7_3:-1372757 | None:intergenic |
| AGCCAAGGTGCTACCATTAC+AGG | 0.321099 | 7_3:-1368867 | None:intergenic |
| CCTTCGTTTGAGAAGGTTCA+TGG | 0.325533 | 7_3:+1368924 | Msa1088320:CDS |
| TGGTGAACCGGTGATGATTT+TGG | 0.343778 | 7_3:-1368432 | None:intergenic |
| TTGTTTGTCATAATCTTAAC+AGG | 0.349741 | 7_3:-1372540 | None:intergenic |
| CTACAACCTTCAACAATTGC+AGG | 0.370922 | 7_3:-1369035 | None:intergenic |
| GTGGATGTTGGTGGAGGAAA+TGG | 0.371419 | 7_3:+1369086 | Msa1088320:CDS |
| AATAATTGCAGCATCAGCTT+TGG | 0.371668 | 7_3:-1369243 | None:intergenic |
| TAGTCTAAGTGATCGTGTTT+TGG | 0.379341 | 7_3:+1368890 | Msa1088320:CDS |
| ATAATTGCAGCATCAGCTTT+GGG | 0.381639 | 7_3:-1369242 | None:intergenic |
| GTTGGATCTTTGGTGGATGT+TGG | 0.388535 | 7_3:+1369074 | Msa1088320:CDS |
| GCAAAAGAACTTTAAATTGA+AGG | 0.413187 | 7_3:-1372865 | None:intergenic |
| TTTGAGATTTAGGTAAATAT+GGG | 0.419523 | 7_3:+1368468 | Msa1088320:exon |
| AGTGAAGTGTTTGATGGTGT+TGG | 0.443607 | 7_3:+1369056 | Msa1088320:CDS |
| GGATCTTTGGTGGATGTTGG+TGG | 0.444075 | 7_3:+1369077 | Msa1088320:CDS |
| ATGGGAATATGTGATCAAAA+TGG | 0.447784 | 7_3:+1372457 | Msa1088320:CDS |
| CGAATCAAACGTCGAGAAAG+TGG | 0.449365 | 7_3:-1368798 | None:intergenic |
| GTTGTGCCTGCAATTGTTGA+AGG | 0.452460 | 7_3:+1369029 | Msa1088320:CDS |
| AAGTTAATTCCTCGAATCCT+AGG | 0.459690 | 7_3:-1369140 | None:intergenic |
| GTGATTGAAGAAGGAGAAGA+AGG | 0.461626 | 7_3:+1372347 | Msa1088320:CDS |
| TGTCCTTTCTTTGCCAATGT+TGG | 0.463902 | 7_3:-1372426 | None:intergenic |
| TTTGTGTGTATCACGGGTCA+TGG | 0.466189 | 7_3:-1368326 | None:intergenic |
| TGAGGTAACATGGGAGAAGG+AGG | 0.468860 | 7_3:+1368503 | Msa1088320:CDS |
| AAGAAAGGACACTCAAAGAA+TGG | 0.473035 | 7_3:+1372438 | Msa1088320:CDS |
| GTCATTTATAGAAGTTAAGC+TGG | 0.483570 | 7_3:-1368394 | None:intergenic |
| TGATGGTGTTGGATCTTTGG+TGG | 0.485600 | 7_3:+1369067 | Msa1088320:CDS |
| ACTAGAGAGTAGTCCTGTAA+TGG | 0.485926 | 7_3:+1368854 | Msa1088320:CDS |
| ATTACTATATAGTGGTGAAC+CGG | 0.489549 | 7_3:-1368444 | None:intergenic |
| GGTAACATGGGAGAAGGAGG+AGG | 0.491841 | 7_3:+1368506 | Msa1088320:CDS |
| GACGTGGCTCCAAAGTATGA+TGG | 0.492318 | 7_3:+1369182 | Msa1088320:CDS |
| GGTTGTAGTGAAGTGTTTGA+TGG | 0.494535 | 7_3:+1369050 | Msa1088320:CDS |
| TGTTCCACCCCATCATACTT+TGG | 0.494657 | 7_3:-1369191 | None:intergenic |
| AGAAAGGACACTCAAAGAAT+GGG | 0.496687 | 7_3:+1372439 | Msa1088320:CDS |
| AGCCTTAGCAAGGATGTTCA+TGG | 0.501599 | 7_3:-1369114 | None:intergenic |
| GACAAATACATGCAAAGCTT+AGG | 0.501896 | 7_3:-1372591 | None:intergenic |
| ACCTAATTTATATATTTCGA+TGG | 0.507969 | 7_3:+1372756 | Msa1088320:three_prime_UTR |
| TAATCTTATCAATGATGCTA+TGG | 0.508334 | 7_3:+1368989 | Msa1088320:CDS |
| ACACCAACATTGGCAAAGAA+AGG | 0.530834 | 7_3:+1372423 | Msa1088320:CDS |
| TGGCAATCCTTCGTTTGAGA+AGG | 0.531295 | 7_3:+1368917 | Msa1088320:CDS |
| AGTGGTGTTTGAACATAGCT+AGG | 0.534711 | 7_3:-1368780 | None:intergenic |
| TCTTTGGTGGATGTTGGTGG+AGG | 0.540464 | 7_3:+1369080 | Msa1088320:CDS |
| CTGGCAACATCTCTCACTCA+TGG | 0.542664 | 7_3:-1368375 | None:intergenic |
| TCTCGACGTTTGATTCGAAA+CGG | 0.543063 | 7_3:+1368804 | Msa1088320:CDS |
| AATATATAAATTAGGTTGAG+AGG | 0.543275 | 7_3:-1372749 | None:intergenic |
| CCATGAACCTTCTCAAACGA+AGG | 0.546276 | 7_3:-1368924 | None:intergenic |
| GAATATGTGATCAAAATGGC+TGG | 0.547903 | 7_3:+1372461 | Msa1088320:CDS |
| GTGCTAGGAATCTCATGATA+CGG | 0.561868 | 7_3:-1368713 | None:intergenic |
| TAGTGAGGTAACATGGGAGA+AGG | 0.562667 | 7_3:+1368500 | Msa1088320:CDS |
| AATGTTAGACATGGTGATGA+TGG | 0.565434 | 7_3:+1372397 | Msa1088320:CDS |
| ATGATGGCACACACCAACAT+TGG | 0.566313 | 7_3:+1372413 | Msa1088320:CDS |
| TCATGAGATTCCTAGCACAT+AGG | 0.566813 | 7_3:+1368718 | Msa1088320:CDS |
| AATTAGGTTGAGAGGCTCGT+TGG | 0.567061 | 7_3:-1372741 | None:intergenic |
| GTGGAAGCAGTGATTGAAGA+AGG | 0.568622 | 7_3:+1372338 | Msa1088320:CDS |
| GTGAAATGTGCAATTGAACT+TGG | 0.570546 | 7_3:+1368603 | Msa1088320:CDS |
| CACCATGAACATCCTTGCTA+AGG | 0.570717 | 7_3:+1369112 | Msa1088320:CDS |
| AAATACATAGTGAGGTAACA+TGG | 0.570842 | 7_3:+1368493 | Msa1088320:CDS |
| GTTTCAACCAAAATCATCAC+CGG | 0.574211 | 7_3:+1368425 | Msa1088320:five_prime_UTR |
| TGGAGCCACGTCAATGACAT+GGG | 0.575414 | 7_3:-1369171 | None:intergenic |
| GATGGGGTGGAACATGTGGC+AGG | 0.576479 | 7_3:+1369200 | Msa1088320:CDS |
| ACGTGGCTCCAAAGTATGAT+GGG | 0.577653 | 7_3:+1369183 | Msa1088320:CDS |
| TTGGAGCCACGTCAATGACA+TGG | 0.577757 | 7_3:-1369172 | None:intergenic |
| TATGGGAGAAATACATAGTG+AGG | 0.579673 | 7_3:+1368485 | Msa1088320:exon |
| CATAGCTAGGATAGTCGTCA+TGG | 0.584559 | 7_3:-1368767 | None:intergenic |
| CGTAGGGTTAATGTTAGACA+TGG | 0.594316 | 7_3:+1372388 | Msa1088320:CDS |
| TCCTAGGAAAAGCCTTAGCA+AGG | 0.598386 | 7_3:-1369124 | None:intergenic |
| AACACAAGTATAAAGACGTA+GGG | 0.601685 | 7_3:+1372372 | Msa1088320:CDS |
| TGATAACTCTAATAGTGACA+TGG | 0.602961 | 7_3:-1368658 | None:intergenic |
| TCGAAACGGTGAACATAGCA+TGG | 0.603930 | 7_3:+1368818 | Msa1088320:CDS |
| AAATGGAAAAGTTATTATCG+TGG | 0.605798 | 7_3:+1372319 | Msa1088320:CDS |
| GATAACTCTAATAGTGACAT+GGG | 0.606079 | 7_3:-1368657 | None:intergenic |
| AAACACAAGTATAAAGACGT+AGG | 0.611433 | 7_3:+1372371 | Msa1088320:CDS |
| TTTGTCATAATCTTAACAGG+AGG | 0.616532 | 7_3:-1372537 | None:intergenic |
| GGCTCCAAAGTATGATGGGG+TGG | 0.618249 | 7_3:+1369187 | Msa1088320:CDS |
| GCTAGGATAGTCGTCATGGT+TGG | 0.618902 | 7_3:-1368763 | None:intergenic |
| TGCTGTTCAGAGTGTAATCG+TGG | 0.623210 | 7_3:+1372514 | Msa1088320:CDS |
| TCTTCCCCATGTCATTGACG+TGG | 0.641312 | 7_3:+1369166 | Msa1088320:CDS |
| AATACATAGTGAGGTAACAT+GGG | 0.646594 | 7_3:+1368494 | Msa1088320:CDS |
| GTCCTGTAATGGTAGCACCT+TGG | 0.651840 | 7_3:+1368865 | Msa1088320:CDS |
| GTATGATGGGGTGGAACATG+TGG | 0.661895 | 7_3:+1369196 | Msa1088320:CDS |
| CGATCACTTAGACTAAGCCA+AGG | 0.679729 | 7_3:-1368882 | None:intergenic |
| AGGTTCATGGTGAAGATGTG+TGG | 0.694059 | 7_3:+1368937 | Msa1088320:CDS |
| GGAGCCACGTCAATGACATG+GGG | 0.702728 | 7_3:-1369170 | None:intergenic |
| CTTAGCAAGGATGTTCATGG+TGG | 0.721708 | 7_3:-1369111 | None:intergenic |
| CGTGGCTCCAAAGTATGATG+GGG | 0.730063 | 7_3:+1369184 | Msa1088320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATAATAAATAAAA+AGG | + | chr7_3:1368348-1368367 | Msa1088320:five_prime_UTR | 0.0% |
| !! | ATTAATTATATTAAATTTAT+TGG | + | chr7_3:1369330-1369349 | Msa1088320:intron | 0.0% |
| !!! | TAGTTTTTTTTTTTTTTTGT+TGG | + | chr7_3:1370759-1370778 | Msa1088320:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTTTTGT+TGG | + | chr7_3:1370759-1370778 | Msa1088320:intron | 10.0% |
| !!! | CTCAAAAATTTATATTTTAA+AGG | - | chr7_3:1371758-1371777 | None:intergenic | 10.0% |
| !!! | TGTTAACTTTTTATTAATAA+AGG | + | chr7_3:1372123-1372142 | Msa1088320:intron | 10.0% |
| !!! | GTTAACTTTTTATTAATAAA+GGG | + | chr7_3:1372124-1372143 | Msa1088320:intron | 10.0% |
| !!! | TATAGTAATTTTTGAGATTT+AGG | + | chr7_3:1368458-1368477 | Msa1088320:five_prime_UTR | 15.0% |
| !!! | TTTTTACAAAGATTAAGTTT+GGG | - | chr7_3:1369561-1369580 | None:intergenic | 15.0% |
| !!! | TTTTTTACAAAGATTAAGTT+TGG | - | chr7_3:1369562-1369581 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr7_3:1370306-1370325 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr7_3:1370409-1370428 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr7_3:1370433-1370452 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr7_3:1370432-1370451 | Msa1088320:intron | 15.0% |
| !! | AATTATTAAAAGAAAGAGAA+TGG | - | chr7_3:1370466-1370485 | None:intergenic | 15.0% |
| !!! | GTTTTACATGATTTTTTATA+CGG | - | chr7_3:1370735-1370754 | None:intergenic | 15.0% |
| !!! | GTTTTACATGATTTTTTATA+CGG | - | chr7_3:1370735-1370754 | None:intergenic | 15.0% |
| !! | ATGCATTATTATATGTATTT+AGG | + | chr7_3:1371172-1371191 | Msa1088320:intron | 15.0% |
| !! | TGCATTATTATATGTATTTA+GGG | + | chr7_3:1371173-1371192 | Msa1088320:intron | 15.0% |
| !!! | TAAAATATTGATATCTTTTC+AGG | - | chr7_3:1371288-1371307 | None:intergenic | 15.0% |
| !!! | CTATTTTAGTTTAAAAGAAT+AGG | + | chr7_3:1371638-1371657 | Msa1088320:intron | 15.0% |
| !! | TCAGTTAATATTAAAGATTT+CGG | - | chr7_3:1371938-1371957 | None:intergenic | 15.0% |
| !!! | TAACAATATTTTACATATGT+AGG | - | chr7_3:1372108-1372127 | None:intergenic | 15.0% |
| !! | TTGATTAAAAATATGTGATT+TGG | + | chr7_3:1372184-1372203 | Msa1088320:intron | 15.0% |
| !!! | TAATTATTTTGTGTGTATCA+CGG | - | chr7_3:1368336-1368355 | None:intergenic | 20.0% |
| !! | TCTCAAAAATTACTATATAG+TGG | - | chr7_3:1368455-1368474 | None:intergenic | 20.0% |
| !!! | TTTTGAGATTTAGGTAAATA+TGG | + | chr7_3:1368467-1368486 | Msa1088320:exon | 20.0% |
| !!! | TTTGAGATTTAGGTAAATAT+GGG | + | chr7_3:1368468-1368487 | Msa1088320:exon | 20.0% |
| !!! | ATATGTAGAATCACATTTTA+GGG | - | chr7_3:1368688-1368707 | None:intergenic | 20.0% |
| !! | CAATTATTAAGGTAAATCAT+CGG | + | chr7_3:1369258-1369277 | Msa1088320:intron | 20.0% |
| !!! | AAAAACATTTATTTTGAGAC+AGG | + | chr7_3:1369518-1369537 | Msa1088320:intron | 20.0% |
| !!! | TTTTACAAAGATTAAGTTTG+GGG | - | chr7_3:1369560-1369579 | None:intergenic | 20.0% |
| !! | ACTAATATTTAGATTAGGTT+TGG | - | chr7_3:1369593-1369612 | None:intergenic | 20.0% |
| !! | ACAAGACTAATATTTAGATT+AGG | - | chr7_3:1369598-1369617 | None:intergenic | 20.0% |
| !!! | TCTAAATATTAGTCTTGTTT+TGG | + | chr7_3:1369600-1369619 | Msa1088320:intron | 20.0% |
| !!! | TTGTTTTGGTTTCATTATTT+TGG | + | chr7_3:1369614-1369633 | Msa1088320:intron | 20.0% |
| !! | AAAGAGAAAGAAAAACAATT+TGG | + | chr7_3:1370200-1370219 | Msa1088320:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_3:1370346-1370365 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr7_3:1370423-1370442 | Msa1088320:intron | 20.0% |
| !!! | TTTCGAAAACATAATCTTTT+AGG | + | chr7_3:1370582-1370601 | Msa1088320:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTTGGTC+AGG | + | chr7_3:1370764-1370783 | Msa1088320:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTTGGTC+AGG | + | chr7_3:1370764-1370783 | Msa1088320:intron | 20.0% |
| !!! | GTGTTAGTTTTCTTTTTTTA+TGG | + | chr7_3:1370931-1370950 | Msa1088320:intron | 20.0% |
| !!! | TTAGTTTTCTTTTTTTATGG+TGG | + | chr7_3:1370934-1370953 | Msa1088320:intron | 20.0% |
| !! | GCATTATTATATGTATTTAG+GGG | + | chr7_3:1371174-1371193 | Msa1088320:intron | 20.0% |
| !!! | ATTTTTCAAGATGAATAAGT+GGG | - | chr7_3:1371221-1371240 | None:intergenic | 20.0% |
| !! | AACTACTATACAAAATTCTA+AGG | - | chr7_3:1371345-1371364 | None:intergenic | 20.0% |
| !! | ATAACACTTAAATCAAAAGT+TGG | + | chr7_3:1372021-1372040 | Msa1088320:intron | 20.0% |
| !! | ATTATATTAAAATTTGCACC+AGG | + | chr7_3:1372082-1372101 | Msa1088320:intron | 20.0% |
| !! | ATATATCAATTCAATTGTAG+TGG | + | chr7_3:1372225-1372244 | Msa1088320:intron | 20.0% |
| !! | TATATCAATTCAATTGTAGT+GGG | + | chr7_3:1372226-1372245 | Msa1088320:intron | 20.0% |
| !!! | ATAACTTTTCCATTTTCTTT+TGG | - | chr7_3:1372314-1372333 | None:intergenic | 20.0% |
| !! | AAACATAAAAACATTTGTGT+CGG | + | chr7_3:1372638-1372657 | Msa1088320:three_prime_UTR | 20.0% |
| !!! | AATATATAAATTAGGTTGAG+AGG | - | chr7_3:1372752-1372771 | None:intergenic | 20.0% |
| !! | ACCTAATTTATATATTTCGA+TGG | + | chr7_3:1372756-1372775 | Msa1088320:three_prime_UTR | 20.0% |
| !! | ACCATCGAAATATATAAATT+AGG | - | chr7_3:1372760-1372779 | None:intergenic | 20.0% |
| !! | TTTATCGTTTATACCAAATA+TGG | - | chr7_3:1372795-1372814 | None:intergenic | 20.0% |
| !!! | AATTATTTTGTGTGTATCAC+GGG | - | chr7_3:1368335-1368354 | None:intergenic | 25.0% |
| !! | GAAATATGGAAGTACATATT+TGG | + | chr7_3:1368561-1368580 | Msa1088320:CDS | 25.0% |
| !! | GATATGTAGAATCACATTTT+AGG | - | chr7_3:1368689-1368708 | None:intergenic | 25.0% |
| ! | TAATCTTATCAATGATGCTA+TGG | + | chr7_3:1368989-1369008 | Msa1088320:CDS | 25.0% |
| !!! | TTTTGGTTTCATTATTTTGG+TGG | + | chr7_3:1369617-1369636 | Msa1088320:intron | 25.0% |
| ! | TTCATGTTGACATCATAAAA+TGG | + | chr7_3:1369907-1369926 | Msa1088320:intron | 25.0% |
| ! | ATCCATAAACATGAGTATTT+CGG | - | chr7_3:1369973-1369992 | None:intergenic | 25.0% |
| ! | TACTAAAGATGAGTGATTTA+GGG | - | chr7_3:1370251-1370270 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | - | chr7_3:1370979-1370998 | None:intergenic | 25.0% |
| ! | TTGTTAAAAATACACTCTCT+TGG | + | chr7_3:1371118-1371137 | Msa1088320:intron | 25.0% |
| !!! | TTTTTCAAGATGAATAAGTG+GGG | - | chr7_3:1371220-1371239 | None:intergenic | 25.0% |
| !!! | CATTTTTCAAGATGAATAAG+TGG | - | chr7_3:1371222-1371241 | None:intergenic | 25.0% |
| !! | TACTATACAAAATTCTAAGG+CGG | - | chr7_3:1371342-1371361 | None:intergenic | 25.0% |
| !! | TTGTATAGTAGTTGTCTTTT+AGG | + | chr7_3:1371352-1371371 | Msa1088320:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr7_3:1371511-1371530 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr7_3:1371524-1371543 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr7_3:1371523-1371542 | Msa1088320:intron | 25.0% |
| !! | AAGAATAGGTTGAATCAAAA+TGG | + | chr7_3:1371652-1371671 | Msa1088320:intron | 25.0% |
| ! | TAAATCGTCTCAATTAAAGT+AGG | + | chr7_3:1371696-1371715 | Msa1088320:intron | 25.0% |
| ! | TCTCAATTAAAGTAGGTTTA+AGG | + | chr7_3:1371703-1371722 | Msa1088320:intron | 25.0% |
| ! | CTCAATTAAAGTAGGTTTAA+GGG | + | chr7_3:1371704-1371723 | Msa1088320:intron | 25.0% |
| ! | ACTTCAATTAATTGGTGTAT+TGG | - | chr7_3:1372152-1372171 | None:intergenic | 25.0% |
| ! | CATCATACACTTCAATTAAT+TGG | - | chr7_3:1372160-1372179 | None:intergenic | 25.0% |
| ! | ATTAATTGAAGTGTATGATG+TGG | + | chr7_3:1372160-1372179 | Msa1088320:intron | 25.0% |
| ! | AAATGGAAAAGTTATTATCG+TGG | + | chr7_3:1372319-1372338 | Msa1088320:CDS | 25.0% |
| ! | TTGTTTGTCATAATCTTAAC+AGG | - | chr7_3:1372543-1372562 | None:intergenic | 25.0% |
| ! | AGTGAAATGCATTAAAAATG+AGG | + | chr7_3:1372712-1372731 | Msa1088320:three_prime_UTR | 25.0% |
| ! | GCAAAAGAACTTTAAATTGA+AGG | - | chr7_3:1372868-1372887 | None:intergenic | 25.0% |
| GTCATTTATAGAAGTTAAGC+TGG | - | chr7_3:1368397-1368416 | None:intergenic | 30.0% | |
| ATTACTATATAGTGGTGAAC+CGG | - | chr7_3:1368447-1368466 | None:intergenic | 30.0% | |
| AAATACATAGTGAGGTAACA+TGG | + | chr7_3:1368493-1368512 | Msa1088320:CDS | 30.0% | |
| AATACATAGTGAGGTAACAT+GGG | + | chr7_3:1368494-1368513 | Msa1088320:CDS | 30.0% | |
| GATAACTCTAATAGTGACAT+GGG | - | chr7_3:1368660-1368679 | None:intergenic | 30.0% | |
| TGATAACTCTAATAGTGACA+TGG | - | chr7_3:1368661-1368680 | None:intergenic | 30.0% | |
| ! | TGAATATTTTCCTATGTGCT+AGG | - | chr7_3:1368731-1368750 | None:intergenic | 30.0% |
| AACTACTAGAGTAGTTAAGT+TGG | + | chr7_3:1369401-1369420 | Msa1088320:intron | 30.0% | |
| !!! | ATTTTGAGACAGGAAGTATT+CGG | + | chr7_3:1369528-1369547 | Msa1088320:intron | 30.0% |
| !!! | TTTCATTATTTTGGTGGATG+TGG | + | chr7_3:1369623-1369642 | Msa1088320:intron | 30.0% |
| ATGTTTATGGATCTACATTG+TGG | + | chr7_3:1369981-1370000 | Msa1088320:intron | 30.0% | |
| TGAATCAAACAAACACAAGA+CGG | + | chr7_3:1370059-1370078 | Msa1088320:intron | 30.0% | |
| GAAAGAAAAACAATTTGGAG+AGG | + | chr7_3:1370205-1370224 | Msa1088320:intron | 30.0% | |
| GTACTAAAGATGAGTGATTT+AGG | - | chr7_3:1370252-1370271 | None:intergenic | 30.0% | |
| ! | TGTACAGAGTATTAATTGGA+GGG | - | chr7_3:1370380-1370399 | None:intergenic | 30.0% |
| ! | GTAGTGTACAGAGTATTAAT+TGG | - | chr7_3:1370384-1370403 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr7_3:1370514-1370533 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7_3:1370515-1370534 | Msa1088320:intron | 30.0% |
| !!! | TTTCTTTTTTTATGGTGGTC+AGG | + | chr7_3:1370939-1370958 | Msa1088320:intron | 30.0% |
| !!! | TTCTTTTTTTATGGTGGTCA+GGG | + | chr7_3:1370940-1370959 | Msa1088320:intron | 30.0% |
| CATAATATATGTAAGGTCCA+GGG | - | chr7_3:1370972-1370991 | None:intergenic | 30.0% | |
| ! | ATACGCTATGAGACAATTTT+TGG | + | chr7_3:1371094-1371113 | Msa1088320:intron | 30.0% |
| ! | TACGCTATGAGACAATTTTT+GGG | + | chr7_3:1371095-1371114 | Msa1088320:intron | 30.0% |
| TATTATATGTATTTAGGGGC+CGG | + | chr7_3:1371178-1371197 | Msa1088320:intron | 30.0% | |
| AAATGTGAATTCTAGTCACT+AGG | + | chr7_3:1371237-1371256 | Msa1088320:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr7_3:1371428-1371447 | Msa1088320:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr7_3:1371498-1371517 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr7_3:1371549-1371568 | Msa1088320:intron | 30.0% | |
| ! | AATAGGTTGAATCAAAATGG+AGG | + | chr7_3:1371655-1371674 | Msa1088320:intron | 30.0% |
| ! | ATATTTTACATATGTAGGCC+TGG | - | chr7_3:1372103-1372122 | None:intergenic | 30.0% |
| GAAGCAATTCCAAAAGAAAA+TGG | + | chr7_3:1372302-1372321 | Msa1088320:CDS | 30.0% | |
| AAACACAAGTATAAAGACGT+AGG | + | chr7_3:1372371-1372390 | Msa1088320:CDS | 30.0% | |
| AACACAAGTATAAAGACGTA+GGG | + | chr7_3:1372372-1372391 | Msa1088320:CDS | 30.0% | |
| ATGGGAATATGTGATCAAAA+TGG | + | chr7_3:1372457-1372476 | Msa1088320:CDS | 30.0% | |
| TTTGTCATAATCTTAACAGG+AGG | - | chr7_3:1372540-1372559 | None:intergenic | 30.0% | |
| TTGATTGTGTAGACCATATT+TGG | + | chr7_3:1372779-1372798 | Msa1088320:three_prime_UTR | 30.0% | |
| GTTTCAACCAAAATCATCAC+CGG | + | chr7_3:1368425-1368444 | Msa1088320:five_prime_UTR | 35.0% | |
| TATGGGAGAAATACATAGTG+AGG | + | chr7_3:1368485-1368504 | Msa1088320:exon | 35.0% | |
| CACAAGCTCAAGTAGAAATA+TGG | + | chr7_3:1368547-1368566 | Msa1088320:CDS | 35.0% | |
| GTGAAATGTGCAATTGAACT+TGG | + | chr7_3:1368603-1368622 | Msa1088320:CDS | 35.0% | |
| !!! | GGGTTTTTTGTGCTTTTCAA+TGG | - | chr7_3:1368640-1368659 | None:intergenic | 35.0% |
| ! | TAGTCTAAGTGATCGTGTTT+TGG | + | chr7_3:1368890-1368909 | Msa1088320:CDS | 35.0% |
| !!! | AGTGATCGTGTTTTGGTTAA+TGG | + | chr7_3:1368897-1368916 | Msa1088320:CDS | 35.0% |
| AAGTTAATTCCTCGAATCCT+AGG | - | chr7_3:1369143-1369162 | None:intergenic | 35.0% | |
| ATAATTGCAGCATCAGCTTT+GGG | - | chr7_3:1369245-1369264 | None:intergenic | 35.0% | |
| AATAATTGCAGCATCAGCTT+TGG | - | chr7_3:1369246-1369265 | None:intergenic | 35.0% | |
| AGCTGATGCTGCAATTATTA+AGG | + | chr7_3:1369247-1369266 | Msa1088320:CDS | 35.0% | |
| CATAAACATGAGTATTTCGG+TGG | - | chr7_3:1369970-1369989 | None:intergenic | 35.0% | |
| CACCGAAATACTCATGTTTA+TGG | + | chr7_3:1369968-1369987 | Msa1088320:intron | 35.0% | |
| ! | TTCGATTTTTCGTCTTTGTG+CGG | - | chr7_3:1370097-1370116 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+GGG | - | chr7_3:1370276-1370295 | None:intergenic | 35.0% |
| !! | GAGCGACACTCATTTTAAAA+CGG | - | chr7_3:1370280-1370299 | None:intergenic | 35.0% |
| ! | GTGTACAGAGTATTAATTGG+AGG | - | chr7_3:1370381-1370400 | None:intergenic | 35.0% |
| GCATAATATATGTAAGGTCC+AGG | - | chr7_3:1370973-1370992 | None:intergenic | 35.0% | |
| ATTATATGTATTTAGGGGCC+GGG | + | chr7_3:1371179-1371198 | Msa1088320:intron | 35.0% | |
| CTGATTTATTGAAGACGAGT+TGG | - | chr7_3:1371378-1371397 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr7_3:1371433-1371452 | None:intergenic | 35.0% | |
| CCTAAAGCGATTTACATTTG+TGG | - | chr7_3:1371735-1371754 | None:intergenic | 35.0% | |
| CCACAAATGTAAATCGCTTT+AGG | + | chr7_3:1371732-1371751 | Msa1088320:intron | 35.0% | |
| CTCTACAGTTCTTCAAGATT+TGG | - | chr7_3:1372283-1372302 | None:intergenic | 35.0% | |
| ! | AATGTTAGACATGGTGATGA+TGG | + | chr7_3:1372397-1372416 | Msa1088320:CDS | 35.0% |
| AAGAAAGGACACTCAAAGAA+TGG | + | chr7_3:1372438-1372457 | Msa1088320:CDS | 35.0% | |
| AGAAAGGACACTCAAAGAAT+GGG | + | chr7_3:1372439-1372458 | Msa1088320:CDS | 35.0% | |
| GAATATGTGATCAAAATGGC+TGG | + | chr7_3:1372461-1372480 | Msa1088320:CDS | 35.0% | |
| GACAAATACATGCAAAGCTT+AGG | - | chr7_3:1372594-1372613 | None:intergenic | 35.0% | |
| GTGCTAGGAATCTCATGATA+CGG | - | chr7_3:1368716-1368735 | None:intergenic | 40.0% | |
| TCATGAGATTCCTAGCACAT+AGG | + | chr7_3:1368718-1368737 | Msa1088320:CDS | 40.0% | |
| AGTGGTGTTTGAACATAGCT+AGG | - | chr7_3:1368783-1368802 | None:intergenic | 40.0% | |
| ! | TCTCGACGTTTGATTCGAAA+CGG | + | chr7_3:1368804-1368823 | Msa1088320:CDS | 40.0% |
| ACTAGAGAGTAGTCCTGTAA+TGG | + | chr7_3:1368854-1368873 | Msa1088320:CDS | 40.0% | |
| CTACAACCTTCAACAATTGC+AGG | - | chr7_3:1369038-1369057 | None:intergenic | 40.0% | |
| ! | GGTTGTAGTGAAGTGTTTGA+TGG | + | chr7_3:1369050-1369069 | Msa1088320:CDS | 40.0% |
| !! | AGTGAAGTGTTTGATGGTGT+TGG | + | chr7_3:1369056-1369075 | Msa1088320:CDS | 40.0% |
| !! | GTTTGATGGTGTTGGATCTT+TGG | + | chr7_3:1369064-1369083 | Msa1088320:CDS | 40.0% |
| !!! | CGACACTCATTTTAAAACGG+AGG | - | chr7_3:1370277-1370296 | None:intergenic | 40.0% |
| ! | TGATGACCACTGTGATTTTG+AGG | + | chr7_3:1370558-1370577 | Msa1088320:intron | 40.0% |
| CGAAAACCTCAAAATCACAG+TGG | - | chr7_3:1370567-1370586 | None:intergenic | 40.0% | |
| CCTCGTGAGCTTAATTCATT+TGG | - | chr7_3:1371006-1371025 | None:intergenic | 40.0% | |
| CCAAATGAATTAAGCTCACG+AGG | + | chr7_3:1371003-1371022 | Msa1088320:intron | 40.0% | |
| ! | AGATGAATAAGTGGGGTGTT+CGG | - | chr7_3:1371213-1371232 | None:intergenic | 40.0% |
| !!! | TGTAGTGGGTTTTGCATGAT+TGG | + | chr7_3:1372240-1372259 | Msa1088320:intron | 40.0% |
| !!! | GTAGTGGGTTTTGCATGATT+GGG | + | chr7_3:1372241-1372260 | Msa1088320:intron | 40.0% |
| !!! | TAGTGGGTTTTGCATGATTG+GGG | + | chr7_3:1372242-1372261 | Msa1088320:intron | 40.0% |
| GTGATTGAAGAAGGAGAAGA+AGG | + | chr7_3:1372347-1372366 | Msa1088320:CDS | 40.0% | |
| CGTAGGGTTAATGTTAGACA+TGG | + | chr7_3:1372388-1372407 | Msa1088320:CDS | 40.0% | |
| ACACCAACATTGGCAAAGAA+AGG | + | chr7_3:1372423-1372442 | Msa1088320:CDS | 40.0% | |
| TGTCCTTTCTTTGCCAATGT+TGG | - | chr7_3:1372429-1372448 | None:intergenic | 40.0% | |
| TTTGTGTGTATCACGGGTCA+TGG | - | chr7_3:1368329-1368348 | None:intergenic | 45.0% | |
| ! | TGGTGAACCGGTGATGATTT+TGG | - | chr7_3:1368435-1368454 | None:intergenic | 45.0% |
| TAGTGAGGTAACATGGGAGA+AGG | + | chr7_3:1368500-1368519 | Msa1088320:CDS | 45.0% | |
| GGAGGAGGAAGAAGAAAAAG+AGG | + | chr7_3:1368521-1368540 | Msa1088320:CDS | 45.0% | |
| ! | GTCGTCATGGTTGGTATTCA+TGG | - | chr7_3:1368757-1368776 | None:intergenic | 45.0% |
| CATAGCTAGGATAGTCGTCA+TGG | - | chr7_3:1368770-1368789 | None:intergenic | 45.0% | |
| CGAATCAAACGTCGAGAAAG+TGG | - | chr7_3:1368801-1368820 | None:intergenic | 45.0% | |
| TCGAAACGGTGAACATAGCA+TGG | + | chr7_3:1368818-1368837 | Msa1088320:CDS | 45.0% | |
| CGATCACTTAGACTAAGCCA+AGG | - | chr7_3:1368885-1368904 | None:intergenic | 45.0% | |
| TGGCAATCCTTCGTTTGAGA+AGG | + | chr7_3:1368917-1368936 | Msa1088320:CDS | 45.0% | |
| CCATGAACCTTCTCAAACGA+AGG | - | chr7_3:1368927-1368946 | None:intergenic | 45.0% | |
| CCTTCGTTTGAGAAGGTTCA+TGG | + | chr7_3:1368924-1368943 | Msa1088320:CDS | 45.0% | |
| AGGTTCATGGTGAAGATGTG+TGG | + | chr7_3:1368937-1368956 | Msa1088320:CDS | 45.0% | |
| GTTGTGCCTGCAATTGTTGA+AGG | + | chr7_3:1369029-1369048 | Msa1088320:CDS | 45.0% | |
| ! | TGATGGTGTTGGATCTTTGG+TGG | + | chr7_3:1369067-1369086 | Msa1088320:CDS | 45.0% |
| ! | GTTGGATCTTTGGTGGATGT+TGG | + | chr7_3:1369074-1369093 | Msa1088320:CDS | 45.0% |
| CTTAGCAAGGATGTTCATGG+TGG | - | chr7_3:1369114-1369133 | None:intergenic | 45.0% | |
| CACCATGAACATCCTTGCTA+AGG | + | chr7_3:1369112-1369131 | Msa1088320:CDS | 45.0% | |
| AGCCTTAGCAAGGATGTTCA+TGG | - | chr7_3:1369117-1369136 | None:intergenic | 45.0% | |
| ! | TCCTTGCTAAGGCTTTTCCT+AGG | + | chr7_3:1369123-1369142 | Msa1088320:CDS | 45.0% |
| TCCTAGGAAAAGCCTTAGCA+AGG | - | chr7_3:1369127-1369146 | None:intergenic | 45.0% | |
| ! | AAGGCTTTTCCTAGGATTCG+AGG | + | chr7_3:1369131-1369150 | Msa1088320:CDS | 45.0% |
| ACGTGGCTCCAAAGTATGAT+GGG | + | chr7_3:1369183-1369202 | Msa1088320:CDS | 45.0% | |
| TGTTCCACCCCATCATACTT+TGG | - | chr7_3:1369194-1369213 | None:intergenic | 45.0% | |
| !! | TTGAGACAGGAAGTATTCGG+TGG | + | chr7_3:1369531-1369550 | Msa1088320:intron | 45.0% |
| CAATTTGGAGAGGTGACTCA+AGG | + | chr7_3:1370215-1370234 | Msa1088320:intron | 45.0% | |
| TGCCAATTGAGCTATGCTCA+CGG | - | chr7_3:1371147-1371166 | None:intergenic | 45.0% | |
| TGAGCATAGCTCAATTGGCA+TGG | + | chr7_3:1371147-1371166 | Msa1088320:intron | 45.0% | |
| GGAGAGAGAAAAAGGAAGAG+AGG | - | chr7_3:1371490-1371509 | None:intergenic | 45.0% | |
| GTGGAAGCAGTGATTGAAGA+AGG | + | chr7_3:1372338-1372357 | Msa1088320:CDS | 45.0% | |
| ATGATGGCACACACCAACAT+TGG | + | chr7_3:1372413-1372432 | Msa1088320:CDS | 45.0% | |
| TGCTGTTCAGAGTGTAATCG+TGG | + | chr7_3:1372514-1372533 | Msa1088320:CDS | 45.0% | |
| !! | AATTAGGTTGAGAGGCTCGT+TGG | - | chr7_3:1372744-1372763 | None:intergenic | 45.0% |
| !! | AAAAAAAAATGTTAAATTAA+AGG | - | chr7_3:1369715-1369734 | None:intergenic | 5.0% |
| !!! | TTTAACATTTTTTTTTAATT+TGG | + | chr7_3:1369719-1369738 | Msa1088320:intron | 5.0% |
| !! | AAACATAAAAATAAAAAAAA+TGG | - | chr7_3:1369765-1369784 | None:intergenic | 5.0% |
| !! | AAAATTAAATAAAATTGATT+TGG | + | chr7_3:1371959-1371978 | Msa1088320:intron | 5.0% |
| !! | TAAATTATTTGAATATATTT+AGG | - | chr7_3:1372834-1372853 | None:intergenic | 5.0% |
| CTGGCAACATCTCTCACTCA+TGG | - | chr7_3:1368378-1368397 | None:intergenic | 50.0% | |
| TGAGGTAACATGGGAGAAGG+AGG | + | chr7_3:1368503-1368522 | Msa1088320:CDS | 50.0% | |
| GCTAGGATAGTCGTCATGGT+TGG | - | chr7_3:1368766-1368785 | None:intergenic | 50.0% | |
| GTCCTGTAATGGTAGCACCT+TGG | + | chr7_3:1368865-1368884 | Msa1088320:CDS | 50.0% | |
| ! | AGCCAAGGTGCTACCATTAC+AGG | - | chr7_3:1368870-1368889 | None:intergenic | 50.0% |
| ! | GGATCTTTGGTGGATGTTGG+TGG | + | chr7_3:1369077-1369096 | Msa1088320:CDS | 50.0% |
| ! | TCTTTGGTGGATGTTGGTGG+AGG | + | chr7_3:1369080-1369099 | Msa1088320:CDS | 50.0% |
| ! | GTGGATGTTGGTGGAGGAAA+TGG | + | chr7_3:1369086-1369105 | Msa1088320:CDS | 50.0% |
| TCTTCCCCATGTCATTGACG+TGG | + | chr7_3:1369166-1369185 | Msa1088320:CDS | 50.0% | |
| TGGAGCCACGTCAATGACAT+GGG | - | chr7_3:1369174-1369193 | None:intergenic | 50.0% | |
| TTGGAGCCACGTCAATGACA+TGG | - | chr7_3:1369175-1369194 | None:intergenic | 50.0% | |
| GACGTGGCTCCAAAGTATGA+TGG | + | chr7_3:1369182-1369201 | Msa1088320:CDS | 50.0% | |
| CGTGGCTCCAAAGTATGATG+GGG | + | chr7_3:1369184-1369203 | Msa1088320:CDS | 50.0% | |
| ! | GTATGATGGGGTGGAACATG+TGG | + | chr7_3:1369196-1369215 | Msa1088320:CDS | 50.0% |
| GGTGGATGTGGAATACTGCT+TGG | + | chr7_3:1369635-1369654 | Msa1088320:intron | 50.0% | |
| CCAATTGAGCTATGCTCACG+GGG | - | chr7_3:1371145-1371164 | None:intergenic | 50.0% | |
| GCCAATTGAGCTATGCTCAC+GGG | - | chr7_3:1371146-1371165 | None:intergenic | 50.0% | |
| GGTAACATGGGAGAAGGAGG+AGG | + | chr7_3:1368506-1368525 | Msa1088320:CDS | 55.0% | |
| GGAGCCACGTCAATGACATG+GGG | - | chr7_3:1369173-1369192 | None:intergenic | 55.0% | |
| ! | GGCTCCAAAGTATGATGGGG+TGG | + | chr7_3:1369187-1369206 | Msa1088320:CDS | 55.0% |
| CCCCGTGAGCATAGCTCAAT+TGG | + | chr7_3:1371142-1371161 | Msa1088320:intron | 55.0% | |
| GATGGGGTGGAACATGTGGC+AGG | + | chr7_3:1369200-1369219 | Msa1088320:CDS | 60.0% | |
| GGTGGTCAGGGTTTGAACCC+TGG | + | chr7_3:1370952-1370971 | Msa1088320:intron | 60.0% | |
| GGGTGTTCGGAGTTCGAACC+CGG | - | chr7_3:1371200-1371219 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 1368319 | 1372899 | 1368319 | ID=Msa1088320;Name=Msa1088320 |
| chr7_3 | mRNA | 1368319 | 1372899 | 1368319 | ID=Msa1088320-mRNA-1;Parent=Msa1088320;Name=Msa1088320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=167|1|1|1|1|1|2|352|361 |
| chr7_3 | exon | 1368319 | 1369268 | 1368319 | ID=Msa1088320-mRNA-1:exon:520;Parent=Msa1088320-mRNA-1 |
| chr7_3 | exon | 1372245 | 1372899 | 1372245 | ID=Msa1088320-mRNA-1:exon:521;Parent=Msa1088320-mRNA-1 |
| chr7_3 | five_prime_UTR | 1368319 | 1368485 | 1368319 | ID=Msa1088320-mRNA-1:five_prime_utr;Parent=Msa1088320-mRNA-1 |
| chr7_3 | CDS | 1368486 | 1369268 | 1368486 | ID=Msa1088320-mRNA-1:cds;Parent=Msa1088320-mRNA-1 |
| chr7_3 | CDS | 1372245 | 1372547 | 1372245 | ID=Msa1088320-mRNA-1:cds;Parent=Msa1088320-mRNA-1 |
| chr7_3 | three_prime_UTR | 1372548 | 1372899 | 1372548 | ID=Msa1088320-mRNA-1:three_prime_utr;Parent=Msa1088320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
