Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477480 | XP_003603595.1 | 97.075 | 718 | 13 | 2 | 1 | 716 | 1 | 712 | 0.0 | 1431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477480 | sp|Q9AQW1|REL2_ORYSJ | 30.635 | 457 | 290 | 7 | 264 | 702 | 310 | 757 | 6.51e-63 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477480 | G7J2X7 | 97.075 | 718 | 13 | 2 | 1 | 716 | 1 | 712 | 0.0 | 1431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0477480 | 0.845522 | 3.852983e-59 | -8.615850e-47 |
| Msa0018920 | Msa0477480 | 0.801697 | 7.967548e-49 | -8.615850e-47 |
| Msa0021290 | Msa0477480 | 0.812927 | 3.313196e-51 | -8.615850e-47 |
| Msa0021320 | Msa0477480 | 0.818060 | 2.387129e-52 | -8.615850e-47 |
| Msa0027800 | Msa0477480 | 0.806617 | 7.539644e-50 | -8.615850e-47 |
| Msa0030070 | Msa0477480 | 0.811244 | 7.714959e-51 | -8.615850e-47 |
| Msa0033610 | Msa0477480 | 0.821186 | 4.616289e-53 | -8.615850e-47 |
| Msa0033640 | Msa0477480 | 0.803129 | 4.039151e-49 | -8.615850e-47 |
| Msa0036810 | Msa0477480 | 0.807655 | 4.546288e-50 | -8.615850e-47 |
| Msa0041790 | Msa0477480 | 0.835185 | 1.943976e-56 | -8.615850e-47 |
| Msa0041910 | Msa0477480 | 0.817130 | 3.868512e-52 | -8.615850e-47 |
| Msa0045620 | Msa0477480 | 0.816807 | 4.571115e-52 | -8.615850e-47 |
| Msa0050530 | Msa0477480 | 0.849606 | 2.902032e-60 | -8.615850e-47 |
| Msa0078130 | Msa0477480 | 0.809835 | 1.554640e-50 | -8.615850e-47 |
| Msa0080370 | Msa0477480 | 0.811260 | 7.650466e-51 | -8.615850e-47 |
| Msa0091350 | Msa0477480 | 0.815234 | 1.026050e-51 | -8.615850e-47 |
| Msa0094180 | Msa0477480 | 0.822497 | 2.294608e-53 | -8.615850e-47 |
| Msa0100600 | Msa0477480 | 0.851990 | 6.190596e-61 | -8.615850e-47 |
| Msa0100890 | Msa0477480 | 0.839309 | 1.711401e-57 | -8.615850e-47 |
| Msa0106630 | Msa0477480 | 0.802018 | 6.846789e-49 | -8.615850e-47 |
| Msa0109730 | Msa0477480 | 0.805535 | 1.273625e-49 | -8.615850e-47 |
| Msa0123320 | Msa0477480 | 0.801821 | 7.512435e-49 | -8.615850e-47 |
| Msa0125590 | Msa0477480 | 0.832811 | 7.638505e-56 | -8.615850e-47 |
| Msa0131810 | Msa0477480 | 0.801687 | 8.004305e-49 | -8.615850e-47 |
| Msa0136330 | Msa0477480 | 0.809478 | 1.855530e-50 | -8.615850e-47 |
| Msa0168380 | Msa0477480 | 0.841099 | 5.835455e-58 | -8.615850e-47 |
| Msa0170070 | Msa0477480 | 0.815090 | 1.104625e-51 | -8.615850e-47 |
| Msa0173250 | Msa0477480 | 0.825291 | 5.077273e-54 | -8.615850e-47 |
| Msa0179040 | Msa0477480 | 0.808279 | 3.349273e-50 | -8.615850e-47 |
| Msa0186180 | Msa0477480 | 0.826757 | 2.276673e-54 | -8.615850e-47 |
| Msa0186360 | Msa0477480 | 0.813636 | 2.315675e-51 | -8.615850e-47 |
| Msa0187040 | Msa0477480 | 0.832226 | 1.066735e-55 | -8.615850e-47 |
| Msa0192050 | Msa0477480 | 0.815876 | 7.383619e-52 | -8.615850e-47 |
| Msa0195230 | Msa0477480 | 0.806288 | 8.847147e-50 | -8.615850e-47 |
| Msa0195260 | Msa0477480 | 0.809452 | 1.878682e-50 | -8.615850e-47 |
| Msa0204970 | Msa0477480 | 0.840811 | 6.942529e-58 | -8.615850e-47 |
| Msa0225800 | Msa0477480 | 0.816362 | 5.751375e-52 | -8.615850e-47 |
| Msa0364680 | Msa0477480 | 0.832712 | 8.083387e-56 | -8.615850e-47 |
| Msa0368640 | Msa0477480 | 0.802534 | 5.360306e-49 | -8.615850e-47 |
| Msa0368920 | Msa0477480 | 0.803942 | 2.739932e-49 | -8.615850e-47 |
| Msa0373170 | Msa0477480 | 0.830894 | 2.270952e-55 | -8.615850e-47 |
| Msa0382230 | Msa0477480 | 0.840784 | 7.056813e-58 | -8.615850e-47 |
| Msa0388250 | Msa0477480 | 0.823960 | 1.045251e-53 | -8.615850e-47 |
| Msa0388620 | Msa0477480 | 0.800144 | 1.653889e-48 | -8.615850e-47 |
| Msa0404770 | Msa0477480 | 0.810836 | 9.453827e-51 | -8.615850e-47 |
| Msa0413170 | Msa0477480 | 0.822842 | 1.907949e-53 | -8.615850e-47 |
| Msa0415820 | Msa0477480 | 0.817796 | 2.738528e-52 | -8.615850e-47 |
| Msa0416210 | Msa0477480 | 0.840895 | 6.600326e-58 | -8.615850e-47 |
| Msa0421750 | Msa0477480 | 0.835548 | 1.574100e-56 | -8.615850e-47 |
| Msa0422820 | Msa0477480 | 0.820742 | 5.839805e-53 | -8.615850e-47 |
| Msa0422900 | Msa0477480 | 0.819120 | 1.372456e-52 | -8.615850e-47 |
| Msa0429970 | Msa0477480 | 0.805741 | 1.152952e-49 | -8.615850e-47 |
| Msa0433630 | Msa0477480 | 0.919088 | 6.960448e-87 | -8.615850e-47 |
| Msa0435280 | Msa0477480 | 0.816173 | 6.337968e-52 | -8.615850e-47 |
| Msa0447870 | Msa0477480 | 0.829319 | 5.503191e-55 | -8.615850e-47 |
| Msa0458100 | Msa0477480 | 0.818175 | 2.248122e-52 | -8.615850e-47 |
| Msa0467690 | Msa0477480 | 0.831406 | 1.700064e-55 | -8.615850e-47 |
| Msa0477480 | Msa0479480 | 0.809031 | 2.313190e-50 | -8.615850e-47 |
| Msa0477480 | Msa0506880 | 0.821483 | 3.942816e-53 | -8.615850e-47 |
| Msa0477480 | Msa0513640 | 0.820407 | 6.971234e-53 | -8.615850e-47 |
| Msa0477480 | Msa0514020 | 0.847610 | 1.037188e-59 | -8.615850e-47 |
| Msa0477480 | Msa0520680 | 0.837862 | 4.044981e-57 | -8.615850e-47 |
| Msa0477480 | Msa0521510 | 0.909087 | 8.389681e-82 | -8.615850e-47 |
| Msa0477480 | Msa0521530 | 0.937488 | 3.191441e-98 | -8.615850e-47 |
| Msa0477480 | Msa0522300 | 0.802289 | 6.020678e-49 | -8.615850e-47 |
| Msa0477480 | Msa0527850 | 0.832663 | 8.314632e-56 | -8.615850e-47 |
| Msa0477480 | Msa0528310 | 0.810426 | 1.159461e-50 | -8.615850e-47 |
| Msa0477480 | Msa0541740 | 0.813705 | 2.236133e-51 | -8.615850e-47 |
| Msa0477480 | Msa0544410 | 0.814755 | 1.311023e-51 | -8.615850e-47 |
| Msa0477480 | Msa0544430 | 0.836976 | 6.824477e-57 | -8.615850e-47 |
| Msa0477480 | Msa0552570 | 0.813638 | 2.313582e-51 | -8.615850e-47 |
| Msa0477480 | Msa0553750 | 0.805550 | 1.264584e-49 | -8.615850e-47 |
| Msa0477480 | Msa0554300 | 0.806423 | 8.285696e-50 | -8.615850e-47 |
| Msa0477480 | Msa0561560 | 0.804568 | 2.029458e-49 | -8.615850e-47 |
| Msa0477480 | Msa0566460 | 0.807352 | 5.270246e-50 | -8.615850e-47 |
| Msa0477480 | Msa0571350 | 0.801527 | 8.631904e-49 | -8.615850e-47 |
| Msa0477480 | Msa0572830 | 0.874663 | 5.662792e-68 | -8.615850e-47 |
| Msa0477480 | Msa0574660 | 0.811561 | 6.581987e-51 | -8.615850e-47 |
| Msa0477480 | Msa0576330 | 0.823045 | 1.710550e-53 | -8.615850e-47 |
| Msa0477480 | Msa0582460 | 0.829158 | 6.019657e-55 | -8.615850e-47 |
| Msa0477480 | Msa0584530 | 0.811164 | 8.028452e-51 | -8.615850e-47 |
| Msa0477480 | Msa0586200 | 0.831644 | 1.485087e-55 | -8.615850e-47 |
| Msa0477480 | Msa0605520 | 0.805099 | 1.571689e-49 | -8.615850e-47 |
| Msa0477480 | Msa0615630 | 0.800141 | 1.656170e-48 | -8.615850e-47 |
| Msa0477480 | Msa0618840 | 0.819564 | 1.086856e-52 | -8.615850e-47 |
| Msa0477480 | Msa0618990 | 0.833202 | 6.105691e-56 | -8.615850e-47 |
| Msa0477480 | Msa0620500 | 0.812647 | 3.816071e-51 | -8.615850e-47 |
| Msa0477480 | Msa0620770 | 0.801588 | 8.387630e-49 | -8.615850e-47 |
| Msa0477480 | Msa0625620 | 0.800428 | 1.447789e-48 | -8.615850e-47 |
| Msa0477480 | Msa0630440 | 0.805356 | 1.388461e-49 | -8.615850e-47 |
| Msa0477480 | Msa0640800 | 0.816854 | 4.460778e-52 | -8.615850e-47 |
| Msa0477480 | Msa0646260 | 0.804479 | 2.117985e-49 | -8.615850e-47 |
| Msa0477480 | Msa0647440 | 0.826415 | 2.747343e-54 | -8.615850e-47 |
| Msa0477480 | Msa0648040 | 0.820719 | 5.912185e-53 | -8.615850e-47 |
| Msa0477480 | Msa0654740 | 0.830102 | 3.547004e-55 | -8.615850e-47 |
| Msa0477480 | Msa0657210 | 0.809933 | 1.481061e-50 | -8.615850e-47 |
| Msa0477480 | Msa0663290 | 0.835091 | 2.052773e-56 | -8.615850e-47 |
| Msa0477480 | Msa0664070 | 0.823046 | 1.710096e-53 | -8.615850e-47 |
| Msa0477480 | Msa0687370 | 0.826443 | 2.705861e-54 | -8.615850e-47 |
| Msa0477480 | Msa0688380 | 0.829157 | 6.024200e-55 | -8.615850e-47 |
| Msa0477480 | Msa0688620 | 0.805671 | 1.192591e-49 | -8.615850e-47 |
| Msa0477480 | Msa0689660 | 0.806608 | 7.573210e-50 | -8.615850e-47 |
| Msa0477480 | Msa0689830 | 0.880360 | 5.852474e-70 | -8.615850e-47 |
| Msa0477480 | Msa0690570 | 0.824929 | 6.185141e-54 | -8.615850e-47 |
| Msa0477480 | Msa0690740 | 0.823413 | 1.403761e-53 | -8.615850e-47 |
| Msa0477480 | Msa0701250 | 0.811673 | 6.225430e-51 | -8.615850e-47 |
| Msa0477480 | Msa0705140 | 0.812748 | 3.627624e-51 | -8.615850e-47 |
| Msa0477480 | Msa0707260 | 0.856907 | 2.341394e-62 | -8.615850e-47 |
| Msa0477480 | Msa0708980 | 0.806662 | 7.378046e-50 | -8.615850e-47 |
| Msa0477480 | Msa0717900 | 0.820695 | 5.987036e-53 | -8.615850e-47 |
| Msa0477480 | Msa0720280 | 0.833845 | 4.219897e-56 | -8.615850e-47 |
| Msa0477480 | Msa0722700 | 0.822415 | 2.398161e-53 | -8.615850e-47 |
| Msa0477480 | Msa0737130 | 0.801777 | 7.670608e-49 | -8.615850e-47 |
| Msa0477480 | Msa0749190 | 0.805760 | 1.142715e-49 | -8.615850e-47 |
| Msa0477480 | Msa0750520 | 0.809717 | 1.648427e-50 | -8.615850e-47 |
| Msa0477480 | Msa0751200 | 0.832999 | 6.860684e-56 | -8.615850e-47 |
| Msa0477480 | Msa0751250 | 0.843877 | 1.069447e-58 | -8.615850e-47 |
| Msa0477480 | Msa0751720 | 0.857248 | 1.857513e-62 | -8.615850e-47 |
| Msa0477480 | Msa0767280 | 0.813737 | 2.200123e-51 | -8.615850e-47 |
| Msa0477480 | Msa0771910 | 0.806664 | 7.368832e-50 | -8.615850e-47 |
| Msa0477480 | Msa0774060 | 0.800126 | 1.668390e-48 | -8.615850e-47 |
| Msa0477480 | Msa0780820 | 0.806807 | 6.874287e-50 | -8.615850e-47 |
| Msa0477480 | Msa0803140 | 0.841536 | 4.478810e-58 | -8.615850e-47 |
| Msa0477480 | Msa0816080 | 0.832879 | 7.348006e-56 | -8.615850e-47 |
| Msa0477480 | Msa0816230 | 0.842737 | 2.153967e-58 | -8.615850e-47 |
| Msa0477480 | Msa0827420 | 0.802469 | 5.527519e-49 | -8.615850e-47 |
| Msa0477480 | Msa0831620 | 0.826415 | 2.746498e-54 | -8.615850e-47 |
| Msa0477480 | Msa0831820 | 0.828331 | 9.540679e-55 | -8.615850e-47 |
| Msa0477480 | Msa0837680 | 0.851744 | 7.270349e-61 | -8.615850e-47 |
| Msa0477480 | Msa0841500 | 0.806670 | 7.349743e-50 | -8.615850e-47 |
| Msa0477480 | Msa0846900 | 0.876695 | 1.138468e-68 | -8.615850e-47 |
| Msa0477480 | Msa0850600 | 0.806852 | 6.725006e-50 | -8.615850e-47 |
| Msa0477480 | Msa0856610 | 0.815829 | 7.565578e-52 | -8.615850e-47 |
| Msa0477480 | Msa0861440 | 0.866144 | 3.535144e-65 | -8.615850e-47 |
| Msa0477480 | Msa0874730 | 0.824692 | 7.034421e-54 | -8.615850e-47 |
| Msa0477480 | Msa0900090 | 0.812323 | 4.492052e-51 | -8.615850e-47 |
| Msa0477480 | Msa0926310 | 0.886502 | 3.236178e-72 | -8.615850e-47 |
| Msa0477480 | Msa0930040 | 0.801202 | 1.006487e-48 | -8.615850e-47 |
| Msa0477480 | Msa0945900 | 0.821667 | 3.573696e-53 | -8.615850e-47 |
| Msa0477480 | Msa0963370 | 0.806473 | 8.085783e-50 | -8.615850e-47 |
| Msa0477480 | Msa0976380 | 0.826666 | 2.393726e-54 | -8.615850e-47 |
| Msa0477480 | Msa1000780 | 0.881813 | 1.756091e-70 | -8.615850e-47 |
| Msa0477480 | Msa1008850 | 0.844482 | 7.357325e-59 | -8.615850e-47 |
| Msa0477480 | Msa1021560 | 0.865910 | 4.191771e-65 | -8.615850e-47 |
| Msa0477480 | Msa1025200 | 0.807461 | 4.999219e-50 | -8.615850e-47 |
| Msa0477480 | Msa1027390 | 0.809745 | 1.625642e-50 | -8.615850e-47 |
| Msa0477480 | Msa1041170 | 0.809160 | 2.171031e-50 | -8.615850e-47 |
| Msa0477480 | Msa1050260 | 0.859892 | 3.019103e-63 | -8.615850e-47 |
| Msa0477480 | Msa1060300 | 0.802227 | 6.200018e-49 | -8.615850e-47 |
| Msa0477480 | Msa1071410 | 0.813813 | 2.116116e-51 | -8.615850e-47 |
| Msa0477480 | Msa1076020 | 0.821852 | 3.239213e-53 | -8.615850e-47 |
| Msa0477480 | Msa1078080 | 0.806720 | 7.171262e-50 | -8.615850e-47 |
| Msa0477480 | Msa1078860 | 0.819488 | 1.131461e-52 | -8.615850e-47 |
| Msa0477480 | Msa1078990 | 0.825209 | 5.309318e-54 | -8.615850e-47 |
| Msa0477480 | Msa1085680 | 0.826662 | 2.398452e-54 | -8.615850e-47 |
| Msa0477480 | Msa1104110 | 0.801522 | 8.652523e-49 | -8.615850e-47 |
| Msa0477480 | Msa1105540 | 0.833638 | 4.755104e-56 | -8.615850e-47 |
| Msa0477480 | Msa1105580 | 0.830199 | 3.359547e-55 | -8.615850e-47 |
| Msa0477480 | Msa1124210 | 0.874483 | 6.520794e-68 | -8.615850e-47 |
| Msa0477480 | Msa1138800 | 0.812663 | 3.785197e-51 | -8.615850e-47 |
| Msa0477480 | Msa1147700 | 0.805192 | 1.503402e-49 | -8.615850e-47 |
| Msa0477480 | Msa1148930 | 0.850899 | 1.259501e-60 | -8.615850e-47 |
| Msa0477480 | Msa1160930 | 0.863697 | 2.068663e-64 | -8.615850e-47 |
| Msa0477480 | Msa1163180 | 0.838532 | 2.719231e-57 | -8.615850e-47 |
| Msa0477480 | Msa1166670 | 0.802963 | 4.371493e-49 | -8.615850e-47 |
| Msa0477480 | Msa1169170 | 0.802908 | 4.486470e-49 | -8.615850e-47 |
| Msa0477480 | Msa1169690 | 0.824441 | 8.058853e-54 | -8.615850e-47 |
| Msa0477480 | Msa1180840 | 0.813655 | 2.293101e-51 | -8.615850e-47 |
| Msa0477480 | Msa1188340 | 0.804847 | 1.774870e-49 | -8.615850e-47 |
| Msa0477480 | Msa1201780 | 0.819213 | 1.307107e-52 | -8.615850e-47 |
| Msa0477480 | Msa1206040 | 0.826714 | 2.331807e-54 | -8.615850e-47 |
| Msa0477480 | Msa1215980 | 0.814180 | 1.757086e-51 | -8.615850e-47 |
| Msa0477480 | Msa1220580 | 0.800715 | 1.265179e-48 | -8.615850e-47 |
| Msa0477480 | Msa1226370 | 0.831977 | 1.228945e-55 | -8.615850e-47 |
| Msa0477480 | Msa1231490 | 0.815900 | 7.292406e-52 | -8.615850e-47 |
| Msa0477480 | Msa1240940 | 0.810921 | 9.060693e-51 | -8.615850e-47 |
| Msa0477480 | Msa1254420 | 0.812638 | 3.833930e-51 | -8.615850e-47 |
| Msa0477480 | Msa1267930 | 0.811433 | 7.019115e-51 | -8.615850e-47 |
| Msa0477480 | Msa1277110 | 0.824424 | 8.133330e-54 | -8.615850e-47 |
| Msa0477480 | Msa1282300 | 0.843455 | 1.386724e-58 | -8.615850e-47 |
| Msa0477480 | Msa1294280 | 0.800674 | 1.290279e-48 | -8.615850e-47 |
| Msa0477480 | Msa1294460 | 0.805779 | 1.132220e-49 | -8.615850e-47 |
| Msa0477480 | Msa1294790 | 0.851313 | 9.624878e-61 | -8.615850e-47 |
| Msa0477480 | Msa1297070 | 0.818133 | 2.298076e-52 | -8.615850e-47 |
| Msa0477480 | Msa1301820 | 0.823484 | 1.351051e-53 | -8.615850e-47 |
| Msa0477480 | Msa1301830 | 0.816612 | 5.054300e-52 | -8.615850e-47 |
| Msa0477480 | Msa1301980 | 0.811007 | 8.683594e-51 | -8.615850e-47 |
| Msa0477480 | Msa1315500 | 0.854856 | 9.311744e-62 | -8.615850e-47 |
| Msa0477480 | Msa1328870 | 0.825770 | 3.909920e-54 | -8.615850e-47 |
| Msa0477480 | Msa1334560 | 0.802612 | 5.164556e-49 | -8.615850e-47 |
| Msa0477480 | Msa1339230 | 0.851160 | 1.063250e-60 | -8.615850e-47 |
| Msa0477480 | Msa1342760 | 0.809747 | 1.624206e-50 | -8.615850e-47 |
| Msa0477480 | Msa1361990 | 0.812411 | 4.297286e-51 | -8.615850e-47 |
| Msa0477480 | Msa1363010 | 0.817445 | 3.285526e-52 | -8.615850e-47 |
| Msa0477480 | Msa1368170 | 0.800407 | 1.462643e-48 | -8.615850e-47 |
| Msa0477480 | Msa1371800 | 0.813242 | 2.825879e-51 | -8.615850e-47 |
| Msa0477480 | Msa1372030 | 0.821458 | 3.994186e-53 | -8.615850e-47 |
| Msa0477480 | Msa1376310 | 0.816069 | 6.685606e-52 | -8.615850e-47 |
| Msa0477480 | Msa1381800 | 0.804327 | 2.278047e-49 | -8.615850e-47 |
| Msa0477480 | Msa1385570 | 0.828481 | 8.777694e-55 | -8.615850e-47 |
| Msa0477480 | Msa1387500 | 0.813501 | 2.479623e-51 | -8.615850e-47 |
| Msa0477480 | Msa1389820 | 0.827285 | 1.701949e-54 | -8.615850e-47 |
| Msa0477480 | Msa1390210 | 0.810785 | 9.696627e-51 | -8.615850e-47 |
| Msa0477480 | Msa1393560 | 0.844373 | 7.872730e-59 | -8.615850e-47 |
| Msa0477480 | Msa1399190 | 0.878797 | 2.100233e-69 | -8.615850e-47 |
| Msa0477480 | Msa1402010 | 0.820391 | 7.032320e-53 | -8.615850e-47 |
| Msa0477480 | Msa1419900 | 0.801132 | 1.039991e-48 | -8.615850e-47 |
| Msa0477480 | Msa1420830 | 0.834936 | 2.246291e-56 | -8.615850e-47 |
| Msa0477480 | Msa1426320 | 0.842303 | 2.807725e-58 | -8.615850e-47 |
| Msa0477480 | Msa1432520 | 0.804429 | 2.169451e-49 | -8.615850e-47 |
| Msa0477480 | Msa1435100 | 0.834248 | 3.344410e-56 | -8.615850e-47 |
| Msa0477480 | Msa1439730 | 0.840273 | 9.603232e-58 | -8.615850e-47 |
| Msa0477480 | Msa1458790 | 0.811316 | 7.442245e-51 | -8.615850e-47 |
| Msa0477480 | Msa1463430 | 0.808960 | 2.395491e-50 | -8.615850e-47 |
| Msa0249870 | Msa0477480 | 0.819671 | 1.027419e-52 | -8.615850e-47 |
| Msa0260570 | Msa0477480 | 0.815307 | 9.884896e-52 | -8.615850e-47 |
| Msa0279000 | Msa0477480 | 0.803679 | 3.106651e-49 | -8.615850e-47 |
| Msa0281540 | Msa0477480 | 0.844302 | 8.223226e-59 | -8.615850e-47 |
| Msa0288400 | Msa0477480 | 0.829516 | 4.926409e-55 | -8.615850e-47 |
| Msa0320580 | Msa0477480 | 0.827594 | 1.435232e-54 | -8.615850e-47 |
| Msa0342220 | Msa0477480 | 0.829502 | 4.965940e-55 | -8.615850e-47 |
| Msa0344110 | Msa0477480 | 0.832876 | 7.360115e-56 | -8.615850e-47 |
| Msa0349550 | Msa0477480 | 0.807007 | 6.235752e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477480 | MtrunA17_Chr3g0139411 | 97.075 | 718 | 13 | 2 | 1 | 716 | 1 | 712 | 0.0 | 1431 |
| Msa0477480 | MtrunA17_Chr2g0331821 | 54.690 | 565 | 224 | 5 | 176 | 716 | 204 | 760 | 0.0 | 584 |
| Msa0477480 | MtrunA17_Chr4g0004471 | 53.915 | 447 | 194 | 4 | 273 | 714 | 117 | 556 | 1.58e-156 | 464 |
| Msa0477480 | MtrunA17_Chr4g0004471 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.02e-13 | 73.6 |
| Msa0477480 | MtrunA17_Chr8g0335341 | 28.634 | 454 | 289 | 9 | 281 | 710 | 279 | 721 | 7.42e-54 | 197 |
| Msa0477480 | MtrunA17_Chr8g0335341 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 2.97e-14 | 76.6 |
| Msa0477480 | MtrunA17_Chr7g0250681 | 28.728 | 456 | 290 | 6 | 275 | 710 | 401 | 841 | 2.63e-52 | 194 |
| Msa0477480 | MtrunA17_Chr7g0250681 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 1.81e-14 | 77.4 |
| Msa0477480 | MtrunA17_Chr5g0405741 | 29.688 | 448 | 269 | 8 | 281 | 704 | 206 | 631 | 3.51e-52 | 191 |
| Msa0477480 | MtrunA17_Chr5g0405741 | 49.231 | 65 | 31 | 1 | 1 | 63 | 1 | 65 | 1.42e-12 | 71.2 |
| Msa0477480 | MtrunA17_Chr2g0303521 | 29.247 | 465 | 300 | 9 | 259 | 706 | 179 | 631 | 6.30e-46 | 173 |
| Msa0477480 | MtrunA17_Chr1g0211271 | 26.806 | 526 | 331 | 11 | 220 | 715 | 236 | 737 | 7.48e-45 | 172 |
| Msa0477480 | MtrunA17_Chr4g0072011 | 28.916 | 332 | 213 | 8 | 281 | 595 | 337 | 662 | 7.46e-34 | 138 |
| Msa0477480 | MtrunA17_Chr4g0072011 | 36.134 | 119 | 70 | 3 | 1 | 113 | 1 | 119 | 5.51e-12 | 69.3 |
| Msa0477480 | MtrunA17_Chr3g0118401 | 27.749 | 382 | 216 | 10 | 266 | 594 | 307 | 681 | 2.41e-33 | 137 |
| Msa0477480 | MtrunA17_Chr3g0124841 | 23.789 | 454 | 308 | 6 | 281 | 705 | 456 | 900 | 2.54e-33 | 137 |
| Msa0477480 | MtrunA17_Chr5g0440551 | 27.427 | 412 | 217 | 11 | 279 | 638 | 308 | 689 | 5.32e-31 | 129 |
| Msa0477480 | MtrunA17_Chr5g0448571 | 25.537 | 419 | 274 | 8 | 292 | 701 | 367 | 756 | 1.08e-30 | 129 |
| Msa0477480 | MtrunA17_Chr3g0143731 | 22.779 | 439 | 288 | 10 | 278 | 704 | 280 | 679 | 5.62e-26 | 114 |
| Msa0477480 | MtrunA17_Chr2g0298171 | 26.724 | 348 | 210 | 9 | 279 | 592 | 532 | 868 | 1.33e-25 | 113 |
| Msa0477480 | MtrunA17_Chr2g0298171 | 50.847 | 59 | 29 | 0 | 1 | 59 | 1 | 59 | 1.96e-12 | 70.9 |
| Msa0477480 | MtrunA17_Chr3g0130761 | 23.362 | 351 | 253 | 4 | 362 | 705 | 434 | 775 | 5.81e-21 | 98.2 |
| Msa0477480 | MtrunA17_Chr8g0382551 | 26.809 | 235 | 117 | 9 | 220 | 414 | 218 | 437 | 4.18e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477480 | AT5G25590.1 | 55.985 | 777 | 274 | 15 | 1 | 715 | 1 | 771 | 0.0 | 726 |
| Msa0477480 | AT1G52320.1 | 63.039 | 441 | 161 | 1 | 266 | 704 | 313 | 753 | 0.0 | 570 |
| Msa0477480 | AT1G52320.2 | 63.039 | 441 | 161 | 1 | 266 | 704 | 336 | 776 | 0.0 | 570 |
| Msa0477480 | AT1G52320.5 | 63.039 | 441 | 161 | 1 | 266 | 704 | 336 | 776 | 0.0 | 570 |
| Msa0477480 | AT1G52320.3 | 63.122 | 442 | 159 | 3 | 266 | 704 | 10 | 450 | 0.0 | 568 |
| Msa0477480 | AT1G52320.4 | 63.122 | 442 | 159 | 3 | 266 | 704 | 10 | 450 | 0.0 | 568 |
| Msa0477480 | AT1G02110.1 | 28.753 | 473 | 296 | 7 | 258 | 710 | 250 | 701 | 8.00e-58 | 209 |
| Msa0477480 | AT1G02110.1 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 6.17e-13 | 72.8 |
| Msa0477480 | AT3G51290.3 | 29.955 | 444 | 283 | 5 | 281 | 712 | 202 | 629 | 5.84e-55 | 199 |
| Msa0477480 | AT3G51290.2 | 29.955 | 444 | 283 | 5 | 281 | 712 | 202 | 629 | 9.41e-55 | 201 |
| Msa0477480 | AT3G51290.1 | 29.505 | 444 | 279 | 6 | 281 | 712 | 202 | 623 | 2.40e-50 | 186 |
| Msa0477480 | AT3G60320.1 | 29.128 | 436 | 285 | 9 | 275 | 694 | 351 | 778 | 7.25e-47 | 179 |
| Msa0477480 | AT3G60320.1 | 45.946 | 111 | 56 | 2 | 1 | 111 | 1 | 107 | 6.71e-16 | 82.4 |
| Msa0477480 | AT2G27090.2 | 25.072 | 698 | 411 | 20 | 1 | 609 | 1 | 675 | 8.59e-46 | 175 |
| Msa0477480 | AT2G27090.1 | 25.072 | 698 | 411 | 20 | 1 | 609 | 1 | 675 | 8.59e-46 | 175 |
| Msa0477480 | AT4G39790.1 | 26.761 | 639 | 360 | 20 | 1 | 582 | 9 | 596 | 1.41e-41 | 161 |
| Msa0477480 | AT2G34670.2 | 28.539 | 445 | 278 | 10 | 280 | 704 | 250 | 674 | 2.08e-39 | 155 |
| Msa0477480 | AT1G21740.1 | 24.105 | 531 | 350 | 10 | 208 | 705 | 432 | 942 | 2.43e-34 | 141 |
| Msa0477480 | AT4G30130.3 | 24.925 | 670 | 399 | 20 | 1 | 595 | 1 | 641 | 2.72e-33 | 137 |
| Msa0477480 | AT4G30130.1 | 24.925 | 670 | 399 | 20 | 1 | 595 | 1 | 641 | 2.72e-33 | 137 |
| Msa0477480 | AT1G77500.1 | 25.792 | 442 | 290 | 7 | 281 | 705 | 451 | 871 | 7.18e-32 | 133 |
| Msa0477480 | AT1G20530.1 | 23.801 | 584 | 353 | 19 | 1 | 567 | 1 | 509 | 1.01e-28 | 122 |
| Msa0477480 | AT4G35240.2 | 24.208 | 442 | 278 | 8 | 283 | 704 | 423 | 827 | 1.63e-27 | 119 |
| Msa0477480 | AT4G35240.1 | 24.208 | 442 | 278 | 8 | 283 | 704 | 423 | 827 | 1.63e-27 | 119 |
| Msa0477480 | AT4G35240.4 | 24.208 | 442 | 278 | 8 | 283 | 704 | 423 | 827 | 1.76e-27 | 119 |
| Msa0477480 | AT4G35240.3 | 24.208 | 442 | 278 | 8 | 283 | 704 | 423 | 827 | 1.76e-27 | 119 |
| Msa0477480 | AT2G34670.1 | 27.155 | 464 | 258 | 18 | 167 | 585 | 121 | 549 | 7.17e-25 | 110 |
| Msa0477480 | AT2G19090.1 | 26.857 | 350 | 213 | 6 | 279 | 595 | 385 | 724 | 1.22e-24 | 110 |
| Msa0477480 | AT5G54480.1 | 23.601 | 411 | 267 | 12 | 301 | 704 | 345 | 715 | 2.38e-17 | 87.0 |
| Msa0477480 | AT4G30130.4 | 36.508 | 126 | 77 | 1 | 360 | 485 | 398 | 520 | 1.02e-14 | 78.2 |
| Msa0477480 | AT4G30130.2 | 36.508 | 126 | 77 | 1 | 360 | 485 | 398 | 520 | 1.02e-14 | 78.2 |
Find 182 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATGGATATGGATAATA+TGG | 0.114095 | 3_3:-81683143 | Msa0477480:CDS |
| GGGCTTGGATTGGTGGATTT+TGG | 0.116448 | 3_3:+81681061 | None:intergenic |
| GGCTTGGGATTATTTCTTTA+TGG | 0.126467 | 3_3:-81683158 | Msa0477480:CDS |
| AAACTTGTTGCTCTTGTTAT+TGG | 0.151747 | 3_3:-81681931 | Msa0477480:CDS |
| GGATTATTTCTTTATGGATA+TGG | 0.176860 | 3_3:-81683152 | Msa0477480:CDS |
| GCGCCACCTTCTCCTCCTTC+TGG | 0.178874 | 3_3:-81683226 | Msa0477480:CDS |
| CAAATTGTGACTCCCATTCT+TGG | 0.206075 | 3_3:+81681199 | None:intergenic |
| GTTCTAACCATCCTTAATTA+TGG | 0.212748 | 3_3:-81680399 | Msa0477480:three_prime_UTR |
| ATAACAAGAGCAACAAGTTT+TGG | 0.264787 | 3_3:+81681934 | None:intergenic |
| AAATGTGCTTTCCATAATTA+AGG | 0.266395 | 3_3:+81680388 | None:intergenic |
| TTCTAATTTCGCCGATGGTC+GGG | 0.270291 | 3_3:-81682759 | Msa0477480:CDS |
| AGAAACACATGCCACTGTTT+TGG | 0.288622 | 3_3:-81682398 | Msa0477480:CDS |
| GGTGAGAATGTTGATGTTAA+TGG | 0.289655 | 3_3:-81683064 | Msa0477480:CDS |
| GCCTTCGCCGCCGGTCATTC+CGG | 0.299872 | 3_3:-81683604 | Msa0477480:CDS |
| CCCTTCGTTGTAAATGCTTC+TGG | 0.304621 | 3_3:+81680851 | None:intergenic |
| TCCGCCTCCTCCACCGCCTT+TGG | 0.313457 | 3_3:-81683476 | Msa0477480:CDS |
| CTCAACTTTCTCCGGTGTCT+TGG | 0.318035 | 3_3:+81683015 | None:intergenic |
| ACAACTGAGAATCGCGAATA+TGG | 0.320972 | 3_3:+81681959 | None:intergenic |
| CGCCACCTTCTCCTCCTTCT+GGG | 0.330101 | 3_3:-81683225 | Msa0477480:CDS |
| AACTTGTTGCTCTTGTTATT+GGG | 0.330220 | 3_3:-81681930 | Msa0477480:intron |
| GGAGGAAGAGATGAAGTTAA+AGG | 0.341872 | 3_3:-81680935 | Msa0477480:CDS |
| TGAGGTTGATGTGTATAATA+AGG | 0.342260 | 3_3:-81682996 | Msa0477480:CDS |
| ATAATCCCAAGCCATGTTCT+TGG | 0.359746 | 3_3:+81683168 | None:intergenic |
| TGAGTTTAGAAGAGCAATTA+AGG | 0.371298 | 3_3:-81682900 | Msa0477480:CDS |
| AGAGAAGCCGGTGAGAAATT+AGG | 0.374879 | 3_3:+81683421 | None:intergenic |
| TCAACTTTCTCCGGTGTCTT+GGG | 0.378191 | 3_3:+81683016 | None:intergenic |
| GGCGGAAGAGGCGGTGGAGG+AGG | 0.380266 | 3_3:+81683442 | None:intergenic |
| GAACATATTCTCCCACATAT+TGG | 0.386881 | 3_3:+81681341 | None:intergenic |
| TTTGAGAGCCATGGCATAAC+CGG | 0.391707 | 3_3:+81683585 | None:intergenic |
| GCAGATTTCGCTAGCTCGTC+AGG | 0.404088 | 3_3:+81681003 | None:intergenic |
| ACGACCGCACCGTGCAGCTT+TGG | 0.406384 | 3_3:-81681230 | Msa0477480:CDS |
| TGATATTTCTCAAGATCATA+AGG | 0.409383 | 3_3:-81681271 | Msa0477480:CDS |
| GAAGAGGCGGTGGAGGAGGG+AGG | 0.409543 | 3_3:+81683446 | None:intergenic |
| ATTCTAATTTCGCCGATGGT+CGG | 0.410137 | 3_3:-81682760 | Msa0477480:CDS |
| GACGCCGCCACCGCCTTTGC+CGG | 0.411999 | 3_3:-81683194 | Msa0477480:CDS |
| TCTTCCAAAGGCGGTGGAGG+AGG | 0.417718 | 3_3:+81683472 | None:intergenic |
| GAGAAATATCAAGAGATTTG+AGG | 0.419497 | 3_3:+81681283 | None:intergenic |
| GAGAACTAAGAATCTGCATA+AGG | 0.420407 | 3_3:+81682861 | None:intergenic |
| TGAGCTCTTCCGCGCGCTAT+CGG | 0.425047 | 3_3:-81680659 | Msa0477480:CDS |
| GCTCGTAACGCCTTCGCCGC+CGG | 0.436376 | 3_3:-81683613 | Msa0477480:CDS |
| CTAAGATGCTTGAAGCTACT+AGG | 0.436626 | 3_3:-81682793 | Msa0477480:CDS |
| ATCATCTCTTTCTAGATCAT+CGG | 0.445892 | 3_3:+81680825 | None:intergenic |
| CAAGCCATGTTCTTGGAATC+CGG | 0.447999 | 3_3:+81683175 | None:intergenic |
| GGTACCATTCTTCAAAAGCT+TGG | 0.451334 | 3_3:+81680872 | None:intergenic |
| TCTAATTTCGCCGATGGTCG+GGG | 0.454232 | 3_3:-81682758 | Msa0477480:intron |
| ACAAACTGCTTCTCCGAGAC+CGG | 0.455691 | 3_3:+81680787 | None:intergenic |
| TTGTTGAAGAGGTGGAAGAA+GGG | 0.456126 | 3_3:-81683315 | Msa0477480:CDS |
| CTTTCAGGATGGCCAATATG+TGG | 0.463738 | 3_3:-81681353 | Msa0477480:intron |
| TCCAAAGGCGGTGGAGGAGG+CGG | 0.464614 | 3_3:+81683475 | None:intergenic |
| GATAGCGCGCGGAAGAGCTC+AGG | 0.466453 | 3_3:+81680661 | None:intergenic |
| AAGATCGGCGGTGGAATTAG+TGG | 0.472783 | 3_3:-81683349 | Msa0477480:CDS |
| TCATCTCTTTCTAGATCATC+GGG | 0.475608 | 3_3:+81680826 | None:intergenic |
| GGGAGGATGCAGCTTAACTT+AGG | 0.476909 | 3_3:+81680505 | None:intergenic |
| CGGATTCCAAGAACATGGCT+TGG | 0.478452 | 3_3:-81683174 | Msa0477480:CDS |
| CCCTACACAACACTATCTTA+AGG | 0.478827 | 3_3:+81680344 | None:intergenic |
| CATTCAAGGGCGTATCCAAT+GGG | 0.479627 | 3_3:-81682456 | Msa0477480:CDS |
| ACATCCAAGCTCTTTATAGC+TGG | 0.481961 | 3_3:-81681149 | Msa0477480:CDS |
| GATTCTTCCAAAGGCGGTGG+AGG | 0.482481 | 3_3:+81683469 | None:intergenic |
| TTGGAATCCGGCAAAGGCGG+TGG | 0.482836 | 3_3:+81683187 | None:intergenic |
| TAAAGAAGGGCTTGGATTGG+TGG | 0.484719 | 3_3:+81681054 | None:intergenic |
| GGATTCCAAGAACATGGCTT+GGG | 0.486447 | 3_3:-81683173 | Msa0477480:CDS |
| GAAATGTGAGGAAACTAGAA+AGG | 0.486729 | 3_3:-81680911 | Msa0477480:CDS |
| ATTGTTGAAGAGGTGGAAGA+AGG | 0.490175 | 3_3:-81683316 | Msa0477480:CDS |
| GATGAGATTGAGAATGAAGA+AGG | 0.491897 | 3_3:-81683097 | Msa0477480:CDS |
| ATTGCCCACGCTCAAGGTGG+TGG | 0.492952 | 3_3:-81680592 | Msa0477480:CDS |
| TTTGGAATGTAATCCAAGAA+TGG | 0.494175 | 3_3:-81681212 | Msa0477480:CDS |
| TTAGGCGGAAGAGGCGGTGG+AGG | 0.494227 | 3_3:+81683439 | None:intergenic |
| GAATCCGGCAAAGGCGGTGG+CGG | 0.494288 | 3_3:+81683190 | None:intergenic |
| ATTGCTCTTCTAAACTCAGC+AGG | 0.495940 | 3_3:+81682905 | None:intergenic |
| GGCGCCAGTGTTGAATCATT+AGG | 0.496446 | 3_3:-81682066 | Msa0477480:CDS |
| TTGGAATGTAATCCAAGAAT+GGG | 0.497192 | 3_3:-81681211 | Msa0477480:CDS |
| CAGTTACAGCACCGCAAGAT+CGG | 0.497409 | 3_3:-81683364 | Msa0477480:CDS |
| GGGAAGAGGTTCTTTGAATG+AGG | 0.498151 | 3_3:-81683122 | Msa0477480:CDS |
| AGAACTAAGAATCTGCATAA+GGG | 0.500689 | 3_3:+81682862 | None:intergenic |
| CTTTATCACTGCAGCAAATG+AGG | 0.502909 | 3_3:+81680975 | None:intergenic |
| AAATTAGGCGGAAGAGGCGG+TGG | 0.507309 | 3_3:+81683436 | None:intergenic |
| TGCAAGTGATAACATGGAAT+CGG | 0.508476 | 3_3:-81682480 | Msa0477480:CDS |
| GCGGAAGAGGCGGTGGAGGA+GGG | 0.508892 | 3_3:+81683443 | None:intergenic |
| TTTATGGATATGGATAATAT+GGG | 0.509779 | 3_3:-81683142 | Msa0477480:CDS |
| AATCATGCCATGCATAAAGA+AGG | 0.514400 | 3_3:+81681040 | None:intergenic |
| AAATACAAACAATCCGGTCT+CGG | 0.515130 | 3_3:-81680800 | Msa0477480:CDS |
| TCATTCAAGGGCGTATCCAA+TGG | 0.516135 | 3_3:-81682457 | Msa0477480:CDS |
| TGATGTAAATACAAACAATC+CGG | 0.517170 | 3_3:-81680806 | Msa0477480:CDS |
| TCTTGTGTGTAAATGACTTA+CGG | 0.517302 | 3_3:+81682029 | None:intergenic |
| AAAGACGATCATACTTCAGC+AGG | 0.518195 | 3_3:-81680956 | Msa0477480:CDS |
| CAGCACCGCAAGATCGGCGG+TGG | 0.518911 | 3_3:-81683358 | Msa0477480:CDS |
| CATGGCATAACCGGAATGAC+CGG | 0.520438 | 3_3:+81683594 | None:intergenic |
| GGTGAGAAATTAGGCGGAAG+AGG | 0.523496 | 3_3:+81683430 | None:intergenic |
| TGAGCCAGCTATAAAGAGCT+TGG | 0.525015 | 3_3:+81681145 | None:intergenic |
| ACCGGAATGACCGGCGGCGA+AGG | 0.525985 | 3_3:+81683603 | None:intergenic |
| CGGTCATTCCGGTTATGCCA+TGG | 0.529624 | 3_3:-81683593 | Msa0477480:CDS |
| AGGCACATAATTGAACACTT+AGG | 0.530110 | 3_3:+81680364 | None:intergenic |
| ACATCAACCTCAACTTTCTC+CGG | 0.530753 | 3_3:+81683007 | None:intergenic |
| GTGCTTTCCATAATTAAGGA+TGG | 0.531625 | 3_3:+81680392 | None:intergenic |
| TATCATTCTAATTTCGCCGA+TGG | 0.533390 | 3_3:-81682764 | Msa0477480:CDS |
| TCCAAGCCCTTCTTTATGCA+TGG | 0.533581 | 3_3:-81681047 | Msa0477480:CDS |
| GTATGCTGCTTTCTTGTGTG+AGG | 0.535062 | 3_3:+81680484 | None:intergenic |
| AAGTCGATTGCCCACGCTCA+AGG | 0.535916 | 3_3:-81680598 | Msa0477480:CDS |
| AACATGGAATCGGTCATTCA+AGG | 0.542119 | 3_3:-81682470 | Msa0477480:CDS |
| GCCATGCATAAAGAAGGGCT+TGG | 0.543280 | 3_3:+81681046 | None:intergenic |
| GATATGGATAATATGGGAAG+AGG | 0.547615 | 3_3:-81683136 | Msa0477480:CDS |
| GGCGGTGGAATTAGTGGTGG+AGG | 0.549912 | 3_3:-81683343 | Msa0477480:CDS |
| CCAGAAGCATTTACAACGAA+GGG | 0.551600 | 3_3:-81680851 | Msa0477480:CDS |
| ACAGAGCGTTTGAGAGAAGC+CGG | 0.551771 | 3_3:+81683409 | None:intergenic |
| GGCGTATCCAATGGGGAGGG+TGG | 0.553573 | 3_3:-81682448 | Msa0477480:CDS |
| TTTGGACAAGTTGTTAGCAT+GGG | 0.555933 | 3_3:-81682380 | Msa0477480:CDS |
| GCATAAAGAAGGGCTTGGAT+TGG | 0.556125 | 3_3:+81681051 | None:intergenic |
| AAGAGGCGGTGGAGGAGGGA+GGG | 0.557539 | 3_3:+81683447 | None:intergenic |
| TAATTCCACCGCCGATCTTG+CGG | 0.558644 | 3_3:+81683353 | None:intergenic |
| TATGCTGCTTTCTTGTGTGA+GGG | 0.561052 | 3_3:+81680485 | None:intergenic |
| ACATGGAATCGGTCATTCAA+GGG | 0.561209 | 3_3:-81682469 | Msa0477480:CDS |
| TGCTGTAACTGCAACGACAC+AGG | 0.563887 | 3_3:+81683376 | None:intergenic |
| GCTGCTTTCTTGTGTGAGGG+AGG | 0.563955 | 3_3:+81680488 | None:intergenic |
| TTCTTGGAATCCGGCAAAGG+CGG | 0.566851 | 3_3:+81683184 | None:intergenic |
| AGGGATTCTTCCAAAGGCGG+TGG | 0.573076 | 3_3:+81683466 | None:intergenic |
| AGTTTCGCCGTGAGCGTAGT+CGG | 0.573795 | 3_3:+81683543 | None:intergenic |
| TTTCAGGATGGCCAATATGT+GGG | 0.579247 | 3_3:-81681352 | Msa0477480:intron |
| GGTTAGAACCTACAAAGCTA+TGG | 0.579602 | 3_3:+81680413 | None:intergenic |
| AAATACATTACCCCGACCAT+CGG | 0.580330 | 3_3:+81682748 | None:intergenic |
| AATGAAGAAGGTGAAATTGA+AGG | 0.580423 | 3_3:-81683085 | Msa0477480:CDS |
| TATTGTTGATATGCAGTCGA+TGG | 0.581443 | 3_3:-81682004 | Msa0477480:CDS |
| GAAGAGGTGGAAGAAGGGAA+AGG | 0.581945 | 3_3:-81683310 | Msa0477480:CDS |
| CAGCACCACCACCTTGAGCG+TGG | 0.582962 | 3_3:+81680587 | None:intergenic |
| GGGAAAGGCGGTGATGCTGA+TGG | 0.584993 | 3_3:-81683295 | Msa0477480:CDS |
| AGCACCACCACCTTGAGCGT+GGG | 0.585775 | 3_3:+81680588 | None:intergenic |
| TGGAGGTGACATTGTTGAAG+AGG | 0.585814 | 3_3:-81683326 | Msa0477480:CDS |
| GAAACTCTATGAAGAAGTCA+AGG | 0.586792 | 3_3:-81682353 | Msa0477480:intron |
| GAGGTGGAAGAAGGGAAAGG+CGG | 0.588013 | 3_3:-81683307 | Msa0477480:CDS |
| GTAGTCGGAGAGAGCGGCGC+CGG | 0.592343 | 3_3:+81683558 | None:intergenic |
| GCCTTAAGATAGTGTTGTGT+AGG | 0.592871 | 3_3:-81680345 | Msa0477480:three_prime_UTR |
| GAGTCATGCAAGTGATAACA+TGG | 0.593246 | 3_3:-81682486 | Msa0477480:CDS |
| CTCCCAGAAGGAGGAGAAGG+TGG | 0.593485 | 3_3:+81683223 | None:intergenic |
| CAGAAGCATTTACAACGAAG+GGG | 0.593582 | 3_3:-81680850 | Msa0477480:CDS |
| AGGTGACATTGTTGAAGAGG+TGG | 0.593877 | 3_3:-81683323 | Msa0477480:CDS |
| GGTGCGGTCGTAATGATGCT+TGG | 0.594455 | 3_3:+81681242 | None:intergenic |
| GGACTCAACAGTTTCTGAAG+TGG | 0.596338 | 3_3:-81681983 | Msa0477480:CDS |
| TTACTCCCAGAAGGAGGAGA+AGG | 0.601774 | 3_3:+81683220 | None:intergenic |
| GGATCAGAATGAAGAGGCGG+TGG | 0.604173 | 3_3:+81683496 | None:intergenic |
| ATGTTCTTGGAATCCGGCAA+AGG | 0.605757 | 3_3:+81683181 | None:intergenic |
| TCTTCCGCCTAATTTCTCAC+CGG | 0.608905 | 3_3:-81683428 | Msa0477480:CDS |
| ATCATGCCATGCATAAAGAA+GGG | 0.611365 | 3_3:+81681041 | None:intergenic |
| GAAGTTAAAGGAGAAATGTG+AGG | 0.611782 | 3_3:-81680923 | Msa0477480:CDS |
| AAACTAGAAAGGAATTCTTG+AGG | 0.618185 | 3_3:-81680900 | Msa0477480:CDS |
| GGAGGGAGGGATTCTTCCAA+AGG | 0.620699 | 3_3:+81683460 | None:intergenic |
| GCTCTCTCCGACTACGCTCA+CGG | 0.622545 | 3_3:-81683550 | Msa0477480:CDS |
| ATCTGCATAAGGGTAACAGA+AGG | 0.622988 | 3_3:+81682872 | None:intergenic |
| GGCGTCACTTTACTCCCAGA+AGG | 0.624681 | 3_3:+81683211 | None:intergenic |
| CAAGGGCGTATCCAATGGGG+AGG | 0.624752 | 3_3:-81682452 | Msa0477480:CDS |
| ACCAGAAGCATTTACAACGA+AGG | 0.625698 | 3_3:-81680852 | Msa0477480:CDS |
| CTGAACAAGCAGAAGAAGCG+TGG | 0.626103 | 3_3:-81682087 | Msa0477480:CDS |
| TTTGCCGGATTCCAAGAACA+TGG | 0.627689 | 3_3:-81683179 | Msa0477480:CDS |
| CCTTAAGATAGTGTTGTGTA+GGG | 0.628462 | 3_3:-81680344 | Msa0477480:three_prime_UTR |
| GACGATCATACTTCAGCAGG+AGG | 0.629306 | 3_3:-81680953 | Msa0477480:CDS |
| ATCGGCGGTGGAATTAGTGG+TGG | 0.630858 | 3_3:-81683346 | Msa0477480:CDS |
| TGAGATTGAACCCAAGACAC+CGG | 0.633573 | 3_3:-81683026 | Msa0477480:CDS |
| GGAGCATGAACATGTACATG+AGG | 0.635866 | 3_3:-81682975 | Msa0477480:CDS |
| GATTACATTCCAAAGCTGCA+CGG | 0.636378 | 3_3:+81681221 | None:intergenic |
| CAAGACACCGGAGAAAGTTG+AGG | 0.641109 | 3_3:-81683014 | Msa0477480:CDS |
| TGAGGCGCGTGAGAAGCGTG+AGG | 0.646161 | 3_3:+81683259 | None:intergenic |
| TGAGGATGATGTGATAAGAG+AGG | 0.648109 | 3_3:-81682957 | Msa0477480:CDS |
| GTGAGCGTAGTCGGAGAGAG+CGG | 0.649810 | 3_3:+81683552 | None:intergenic |
| GAGAAATTAGGCGGAAGAGG+CGG | 0.650849 | 3_3:+81683433 | None:intergenic |
| GGCATAACCGGAATGACCGG+CGG | 0.652370 | 3_3:+81683597 | None:intergenic |
| TTACAGCACCGCAAGATCGG+CGG | 0.652795 | 3_3:-81683361 | Msa0477480:CDS |
| GGCGGATCAGAATGAAGAGG+CGG | 0.657993 | 3_3:+81683493 | None:intergenic |
| GTCACTTTACTCCCAGAAGG+AGG | 0.659641 | 3_3:+81683214 | None:intergenic |
| GAGAATGTTGATGTTAATGG+AGG | 0.660500 | 3_3:-81683061 | Msa0477480:CDS |
| TGATGTTAATGGAGGACATG+TGG | 0.660982 | 3_3:-81683053 | Msa0477480:CDS |
| GGAGGCGGATCAGAATGAAG+AGG | 0.664266 | 3_3:+81683490 | None:intergenic |
| TGTTAATGGAGGACATGTGG+AGG | 0.675457 | 3_3:-81683050 | Msa0477480:CDS |
| CATTCCAAAGCTGCACGGTG+CGG | 0.678361 | 3_3:+81681226 | None:intergenic |
| AAGGGCGTATCCAATGGGGA+GGG | 0.678386 | 3_3:-81682451 | Msa0477480:CDS |
| GAAGCCGGTGAGAAATTAGG+CGG | 0.684519 | 3_3:+81683424 | None:intergenic |
| GGGAGGGATTCTTCCAAAGG+CGG | 0.689716 | 3_3:+81683463 | None:intergenic |
| GTTTAGAAGAGCAATTAAGG+TGG | 0.690000 | 3_3:-81682897 | Msa0477480:CDS |
| GAGTATAATCCGATAGCGCG+CGG | 0.690717 | 3_3:+81680650 | None:intergenic |
| GGTGGCGCGTGAGAAGCGTG+AGG | 0.695449 | 3_3:+81683241 | None:intergenic |
| TGTAACTGCAACGACACAGG+CGG | 0.699824 | 3_3:+81683379 | None:intergenic |
| AGAAGCATTTACAACGAAGG+GGG | 0.702303 | 3_3:-81680849 | Msa0477480:CDS |
| ATTCAAGGGCGTATCCAATG+GGG | 0.705978 | 3_3:-81682455 | Msa0477480:CDS |
| TCGATTGCCCACGCTCAAGG+TGG | 0.713047 | 3_3:-81680595 | Msa0477480:CDS |
| TAACAACTTGTCCAAAACAG+TGG | 0.715371 | 3_3:+81682387 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTCAAATTGAATAAAATAA+AGG | + | chr3_3:81681364-81681383 | None:intergenic | 15.0% |
| !! | AACTAGAATTTAAGAAAAAA+AGG | + | chr3_3:81681469-81681488 | None:intergenic | 15.0% |
| !!! | CAATAAGTGAAATTTTAAAA+AGG | + | chr3_3:81681911-81681930 | None:intergenic | 15.0% |
| !! | TACAACATTAAAATAAACTT+CGG | + | chr3_3:81682517-81682536 | None:intergenic | 15.0% |
| !! | TTTATGGATATGGATAATAT+GGG | - | chr3_3:81680928-81680947 | Msa0477480:CDS | 20.0% |
| !! | AATTTAAGAAAAAAAGGTCT+AGG | + | chr3_3:81681463-81681482 | None:intergenic | 20.0% |
| !!! | GAAAGTATAAATGTCAAAAA+TGG | + | chr3_3:81681756-81681775 | None:intergenic | 20.0% |
| !!! | TAGAATATATTTTGCAACAT+CGG | + | chr3_3:81682392-81682411 | None:intergenic | 20.0% |
| !!! | ATATTCTAGAAAATTGTAAG+TGG | - | chr3_3:81682404-81682423 | Msa0477480:CDS | 20.0% |
| !!! | TAATAAAATGCTTTTCGATT+GGG | + | chr3_3:81682435-81682454 | None:intergenic | 20.0% |
| !!! | ATAATAAAATGCTTTTCGAT+TGG | + | chr3_3:81682436-81682455 | None:intergenic | 20.0% |
| !! | TTCCATTTTCTAACTCAAAA+TGG | - | chr3_3:81680351-81680370 | Msa0477480:three_prime_UTR | 25.0% |
| !! | TCCATTTTCTAACTCAAAAT+GGG | - | chr3_3:81680352-81680371 | Msa0477480:three_prime_UTR | 25.0% |
| !! | GGATTATTTCTTTATGGATA+TGG | - | chr3_3:81680918-81680937 | Msa0477480:CDS | 25.0% |
| ! | CTTTATGGATATGGATAATA+TGG | - | chr3_3:81680927-81680946 | Msa0477480:CDS | 25.0% |
| !! | TTCTAGTTGTGTAAAGTTTA+AGG | - | chr3_3:81681481-81681500 | Msa0477480:intron | 25.0% |
| ! | ATCATTAGGAAAAACTAAAG+CGG | - | chr3_3:81682018-81682037 | Msa0477480:CDS | 25.0% |
| ! | CAAATATAGATTGAGAATCT+AGG | + | chr3_3:81682470-81682489 | None:intergenic | 25.0% |
| ! | TAAAATAAACTTCGGTATCT+AGG | + | chr3_3:81682509-81682528 | None:intergenic | 25.0% |
| !!! | TTTTCAATTTGTTCTGGTAT+TGG | - | chr3_3:81682583-81682602 | Msa0477480:intron | 25.0% |
| ! | TGATGCAAAAAATAGAAACT+TGG | + | chr3_3:81682651-81682670 | None:intergenic | 25.0% |
| !!! | TCTATTTTTTGCATCACAAA+TGG | - | chr3_3:81682655-81682674 | Msa0477480:intron | 25.0% |
| ! | TGATATTTCTCAAGATCATA+AGG | - | chr3_3:81682799-81682818 | Msa0477480:CDS | 25.0% |
| !!! | GAGATGAGATTTTTTCTTTT+AGG | + | chr3_3:81682979-81682998 | None:intergenic | 25.0% |
| ! | TGATGTAAATACAAACAATC+CGG | - | chr3_3:81683264-81683283 | Msa0477480:CDS | 25.0% |
| !!! | AAATTTTACCATAGCTTTGT+AGG | - | chr3_3:81683649-81683668 | Msa0477480:CDS | 25.0% |
| ! | AAATGTGCTTTCCATAATTA+AGG | + | chr3_3:81683685-81683704 | None:intergenic | 25.0% |
| !!! | ACCCATTTTGAGTTAGAAAA+TGG | + | chr3_3:81680356-81680375 | None:intergenic | 30.0% |
| AATGAAGAAGGTGAAATTGA+AGG | - | chr3_3:81680985-81681004 | Msa0477480:CDS | 30.0% | |
| !! | TGAGGTTGATGTGTATAATA+AGG | - | chr3_3:81681074-81681093 | Msa0477480:CDS | 30.0% |
| TGAGTTTAGAAGAGCAATTA+AGG | - | chr3_3:81681170-81681189 | Msa0477480:CDS | 30.0% | |
| AGAACTAAGAATCTGCATAA+GGG | + | chr3_3:81681211-81681230 | None:intergenic | 30.0% | |
| CAATTTGGATAATGACATCA+AGG | + | chr3_3:81681436-81681455 | None:intergenic | 30.0% | |
| TGATGTCATTATCCAAATTG+CGG | - | chr3_3:81681436-81681455 | Msa0477480:intron | 30.0% | |
| !!! | GTTTAAGGTTTTTAGTTAGC+TGG | - | chr3_3:81681496-81681515 | Msa0477480:intron | 30.0% |
| ! | TAATTTGCAATGACATTAGC+AGG | - | chr3_3:81681541-81681560 | Msa0477480:intron | 30.0% |
| AAAGCTAACTAACAAGATGA+AGG | + | chr3_3:81681778-81681797 | None:intergenic | 30.0% | |
| !! | TAACTTGTTGCTCTTAATGA+GGG | - | chr3_3:81681881-81681900 | Msa0477480:intron | 30.0% |
| ! | TTTTCCTAATGATTCAACAC+TGG | + | chr3_3:81682011-81682030 | None:intergenic | 30.0% |
| TCTTGTGTGTAAATGACTTA+CGG | + | chr3_3:81682044-81682063 | None:intergenic | 30.0% | |
| ! | ATAACAAGAGCAACAAGTTT+TGG | + | chr3_3:81682139-81682158 | None:intergenic | 30.0% |
| !! | AAACTTGTTGCTCTTGTTAT+TGG | - | chr3_3:81682139-81682158 | Msa0477480:intron | 30.0% |
| !! | AACTTGTTGCTCTTGTTATT+GGG | - | chr3_3:81682140-81682159 | Msa0477480:intron | 30.0% |
| CTAAGATATCAAATAAGCAC+AGG | + | chr3_3:81682208-81682227 | None:intergenic | 30.0% | |
| GTGCTTATTTGATATCTTAG+TGG | - | chr3_3:81682208-81682227 | Msa0477480:intron | 30.0% | |
| ! | TTGGTTAAAGGAAGTTTTCA+AGG | + | chr3_3:81682293-81682312 | None:intergenic | 30.0% |
| TGTAAAGTGACACGATTATT+AGG | + | chr3_3:81682548-81682567 | None:intergenic | 30.0% | |
| !! | TCCTAGTTTTCAATTTGTTC+TGG | - | chr3_3:81682577-81682596 | Msa0477480:intron | 30.0% |
| ACCAGAACAAATTGAAAACT+AGG | + | chr3_3:81682581-81682600 | None:intergenic | 30.0% | |
| ! | TTGGTGTGTTAGCAAAATTT+TGG | + | chr3_3:81682621-81682640 | None:intergenic | 30.0% |
| ATAGAAACTTGGTACTTGAT+TGG | + | chr3_3:81682640-81682659 | None:intergenic | 30.0% | |
| TCAAGTAGATTCATGAATCA+TGG | + | chr3_3:81682694-81682713 | None:intergenic | 30.0% | |
| GAATCTACTTGATTTCTTTC+AGG | - | chr3_3:81682702-81682721 | Msa0477480:intron | 30.0% | |
| GAGAAATATCAAGAGATTTG+AGG | + | chr3_3:81682790-81682809 | None:intergenic | 30.0% | |
| ! | TTTGGAATGTAATCCAAGAA+TGG | - | chr3_3:81682858-81682877 | Msa0477480:CDS | 30.0% |
| TTGGAATGTAATCCAAGAAT+GGG | - | chr3_3:81682859-81682878 | Msa0477480:CDS | 30.0% | |
| AAACTAGAAAGGAATTCTTG+AGG | - | chr3_3:81683170-81683189 | Msa0477480:CDS | 30.0% | |
| !! | AAAACCAAGCTTTTGAAGAA+TGG | - | chr3_3:81683194-81683213 | Msa0477480:CDS | 30.0% |
| ATCATCTCTTTCTAGATCAT+CGG | + | chr3_3:81683248-81683267 | None:intergenic | 30.0% | |
| GTTCTAACCATCCTTAATTA+TGG | - | chr3_3:81683671-81683690 | Msa0477480:CDS | 30.0% | |
| ! | CTTCACGCATTAAGTTTTTG+CGG | + | chr3_3:81680429-81680448 | None:intergenic | 35.0% |
| ! | GGCTTGGGATTATTTCTTTA+TGG | - | chr3_3:81680912-81680931 | Msa0477480:CDS | 35.0% |
| GATATGGATAATATGGGAAG+AGG | - | chr3_3:81680934-81680953 | Msa0477480:CDS | 35.0% | |
| GATGAGATTGAGAATGAAGA+AGG | - | chr3_3:81680973-81680992 | Msa0477480:CDS | 35.0% | |
| GGTGAGAATGTTGATGTTAA+TGG | - | chr3_3:81681006-81681025 | Msa0477480:CDS | 35.0% | |
| GAGAATGTTGATGTTAATGG+AGG | - | chr3_3:81681009-81681028 | Msa0477480:CDS | 35.0% | |
| GTTTAGAAGAGCAATTAAGG+TGG | - | chr3_3:81681173-81681192 | Msa0477480:CDS | 35.0% | |
| GAGAACTAAGAATCTGCATA+AGG | + | chr3_3:81681212-81681231 | None:intergenic | 35.0% | |
| TATCATTCTAATTTCGCCGA+TGG | - | chr3_3:81681306-81681325 | Msa0477480:CDS | 35.0% | |
| !!! | GTGACCAAAGTTTTAAATCG+CGG | - | chr3_3:81681398-81681417 | Msa0477480:intron | 35.0% |
| !!! | TGACCAAAGTTTTAAATCGC+GGG | - | chr3_3:81681399-81681418 | Msa0477480:intron | 35.0% |
| GGATAATGACATCAAGGATT+TGG | + | chr3_3:81681430-81681449 | None:intergenic | 35.0% | |
| TTAGCTGGAATTGACATGTA+AGG | - | chr3_3:81681511-81681530 | Msa0477480:intron | 35.0% | |
| TGCAAGTGATAACATGGAAT+CGG | - | chr3_3:81681590-81681609 | Msa0477480:intron | 35.0% | |
| TAACAACTTGTCCAAAACAG+TGG | + | chr3_3:81681686-81681705 | None:intergenic | 35.0% | |
| ! | TTTTGGACAAGTTGTTAGCA+TGG | - | chr3_3:81681689-81681708 | Msa0477480:intron | 35.0% |
| TTTGGACAAGTTGTTAGCAT+GGG | - | chr3_3:81681690-81681709 | Msa0477480:intron | 35.0% | |
| GAAACTCTATGAAGAAGTCA+AGG | - | chr3_3:81681717-81681736 | Msa0477480:intron | 35.0% | |
| TAGAAAACACGACAGTACAA+TGG | + | chr3_3:81681828-81681847 | None:intergenic | 35.0% | |
| !! | GTAACTTGTTGCTCTTAATG+AGG | - | chr3_3:81681880-81681899 | Msa0477480:intron | 35.0% |
| TATTGTTGATATGCAGTCGA+TGG | - | chr3_3:81682066-81682085 | Msa0477480:CDS | 35.0% | |
| ! | TATTGGGTAAGTATTGCCAA+TGG | - | chr3_3:81682156-81682175 | Msa0477480:intron | 35.0% |
| ! | ATTGGGTAAGTATTGCCAAT+GGG | - | chr3_3:81682157-81682176 | Msa0477480:intron | 35.0% |
| ! | ATATCTCTTTGACTTCCCAT+TGG | + | chr3_3:81682175-81682194 | None:intergenic | 35.0% |
| !! | GTTTTCAAGGAAGTTCACAA+CGG | + | chr3_3:81682280-81682299 | None:intergenic | 35.0% |
| ! | GAAATTTAGGACGTTGTCAT+TGG | + | chr3_3:81682312-81682331 | None:intergenic | 35.0% |
| GTCCTAAATTTCATGCTTGT+TGG | - | chr3_3:81682320-81682339 | Msa0477480:intron | 35.0% | |
| CTCACATTCAAGACTAATTC+AGG | + | chr3_3:81682346-81682365 | None:intergenic | 35.0% | |
| CTACTTGATTTCTTTCAGGA+TGG | - | chr3_3:81682706-81682725 | Msa0477480:intron | 35.0% | |
| GAACATATTCTCCCACATAT+TGG | + | chr3_3:81682732-81682751 | None:intergenic | 35.0% | |
| !!! | TCTTTTAGGTTGCTTTCGAT+GGG | + | chr3_3:81682965-81682984 | None:intergenic | 35.0% |
| !!! | TTCTTTTAGGTTGCTTTCGA+TGG | + | chr3_3:81682966-81682985 | None:intergenic | 35.0% |
| ATCATGCCATGCATAAAGAA+GGG | + | chr3_3:81683032-81683051 | None:intergenic | 35.0% | |
| AATCATGCCATGCATAAAGA+AGG | + | chr3_3:81683033-81683052 | None:intergenic | 35.0% | |
| GAAGTTAAAGGAGAAATGTG+AGG | - | chr3_3:81683147-81683166 | Msa0477480:CDS | 35.0% | |
| GAAATGTGAGGAAACTAGAA+AGG | - | chr3_3:81683159-81683178 | Msa0477480:CDS | 35.0% | |
| TCATCTCTTTCTAGATCATC+GGG | + | chr3_3:81683247-81683266 | None:intergenic | 35.0% | |
| AAATACAAACAATCCGGTCT+CGG | - | chr3_3:81683270-81683289 | Msa0477480:CDS | 35.0% | |
| GTGCTTTCCATAATTAAGGA+TGG | + | chr3_3:81683681-81683700 | None:intergenic | 35.0% | |
| AGGCACATAATTGAACACTT+AGG | + | chr3_3:81683709-81683728 | None:intergenic | 35.0% | |
| CCTTAAGATAGTGTTGTGTA+GGG | - | chr3_3:81683726-81683745 | Msa0477480:five_prime_UTR | 35.0% | |
| ATTGTTGAAGAGGTGGAAGA+AGG | - | chr3_3:81680754-81680773 | Msa0477480:CDS | 40.0% | |
| TTGTTGAAGAGGTGGAAGAA+GGG | - | chr3_3:81680755-81680774 | Msa0477480:CDS | 40.0% | |
| ATAATCCCAAGCCATGTTCT+TGG | + | chr3_3:81680905-81680924 | None:intergenic | 40.0% | |
| TGATGTTAATGGAGGACATG+TGG | - | chr3_3:81681017-81681036 | Msa0477480:CDS | 40.0% | |
| ACATCAACCTCAACTTTCTC+CGG | + | chr3_3:81681066-81681085 | None:intergenic | 40.0% | |
| TGAGGATGATGTGATAAGAG+AGG | - | chr3_3:81681113-81681132 | Msa0477480:CDS | 40.0% | |
| ATTGCTCTTCTAAACTCAGC+AGG | + | chr3_3:81681168-81681187 | None:intergenic | 40.0% | |
| ATCTGCATAAGGGTAACAGA+AGG | + | chr3_3:81681201-81681220 | None:intergenic | 40.0% | |
| CTAAGATGCTTGAAGCTACT+AGG | - | chr3_3:81681277-81681296 | Msa0477480:CDS | 40.0% | |
| ATTCTAATTTCGCCGATGGT+CGG | - | chr3_3:81681310-81681329 | Msa0477480:CDS | 40.0% | |
| AAATACATTACCCCGACCAT+CGG | + | chr3_3:81681325-81681344 | None:intergenic | 40.0% | |
| GGAATTGACATGTAAGGTTG+AGG | - | chr3_3:81681517-81681536 | Msa0477480:intron | 40.0% | |
| GAGTCATGCAAGTGATAACA+TGG | - | chr3_3:81681584-81681603 | Msa0477480:intron | 40.0% | |
| AACATGGAATCGGTCATTCA+AGG | - | chr3_3:81681600-81681619 | Msa0477480:intron | 40.0% | |
| ACATGGAATCGGTCATTCAA+GGG | - | chr3_3:81681601-81681620 | Msa0477480:intron | 40.0% | |
| ! | AGAAACACATGCCACTGTTT+TGG | - | chr3_3:81681672-81681691 | Msa0477480:intron | 40.0% |
| TTCACTTATTGTCGACAGCA+AGG | - | chr3_3:81681920-81681939 | Msa0477480:intron | 40.0% | |
| ACAACTGAGAATCGCGAATA+TGG | + | chr3_3:81682114-81682133 | None:intergenic | 40.0% | |
| ! | AGGACGTTGTCATTGGTTAA+AGG | + | chr3_3:81682305-81682324 | None:intergenic | 40.0% |
| GGCCAACAAGCATGAAATTT+AGG | + | chr3_3:81682325-81682344 | None:intergenic | 40.0% | |
| ! | TTGCAACATCGGTTACTACT+AGG | + | chr3_3:81682381-81682400 | None:intergenic | 40.0% |
| TTTCAGGATGGCCAATATGT+GGG | - | chr3_3:81682718-81682737 | Msa0477480:intron | 40.0% | |
| ! | GGTCTGTAACTATTTTCAGC+TGG | + | chr3_3:81682769-81682788 | None:intergenic | 40.0% |
| GATTACATTCCAAAGCTGCA+CGG | + | chr3_3:81682852-81682871 | None:intergenic | 40.0% | |
| CAAATTGTGACTCCCATTCT+TGG | + | chr3_3:81682874-81682893 | None:intergenic | 40.0% | |
| ACATCCAAGCTCTTTATAGC+TGG | - | chr3_3:81682921-81682940 | Msa0477480:CDS | 40.0% | |
| CTTTATCACTGCAGCAAATG+AGG | + | chr3_3:81683098-81683117 | None:intergenic | 40.0% | |
| AAAGACGATCATACTTCAGC+AGG | - | chr3_3:81683114-81683133 | Msa0477480:CDS | 40.0% | |
| GGAGGAAGAGATGAAGTTAA+AGG | - | chr3_3:81683135-81683154 | Msa0477480:CDS | 40.0% | |
| GGTACCATTCTTCAAAAGCT+TGG | + | chr3_3:81683201-81683220 | None:intergenic | 40.0% | |
| !! | ACCAGAAGCATTTACAACGA+AGG | - | chr3_3:81683218-81683237 | Msa0477480:CDS | 40.0% |
| !! | CCAGAAGCATTTACAACGAA+GGG | - | chr3_3:81683219-81683238 | Msa0477480:CDS | 40.0% |
| !! | CAGAAGCATTTACAACGAAG+GGG | - | chr3_3:81683220-81683239 | Msa0477480:CDS | 40.0% |
| !! | AGAAGCATTTACAACGAAGG+GGG | - | chr3_3:81683221-81683240 | Msa0477480:CDS | 40.0% |
| !! | TATGCTGCTTTCTTGTGTGA+GGG | + | chr3_3:81683588-81683607 | None:intergenic | 40.0% |
| GGTTAGAACCTACAAAGCTA+TGG | + | chr3_3:81683660-81683679 | None:intergenic | 40.0% | |
| GCCTTAAGATAGTGTTGTGT+AGG | - | chr3_3:81683725-81683744 | Msa0477480:five_prime_UTR | 40.0% | |
| CCCTACACAACACTATCTTA+AGG | + | chr3_3:81683729-81683748 | None:intergenic | 40.0% | |
| TTTGAGAGCCATGGCATAAC+CGG | + | chr3_3:81680488-81680507 | None:intergenic | 45.0% | |
| TCTTCCGCCTAATTTCTCAC+CGG | - | chr3_3:81680642-81680661 | Msa0477480:CDS | 45.0% | |
| AGAGAAGCCGGTGAGAAATT+AGG | + | chr3_3:81680652-81680671 | None:intergenic | 45.0% | |
| TGGAGGTGACATTGTTGAAG+AGG | - | chr3_3:81680744-81680763 | Msa0477480:CDS | 45.0% | |
| AGGTGACATTGTTGAAGAGG+TGG | - | chr3_3:81680747-81680766 | Msa0477480:CDS | 45.0% | |
| ATGTTCTTGGAATCCGGCAA+AGG | + | chr3_3:81680892-81680911 | None:intergenic | 45.0% | |
| TTTGCCGGATTCCAAGAACA+TGG | - | chr3_3:81680891-81680910 | Msa0477480:CDS | 45.0% | |
| CAAGCCATGTTCTTGGAATC+CGG | + | chr3_3:81680898-81680917 | None:intergenic | 45.0% | |
| GGATTCCAAGAACATGGCTT+GGG | - | chr3_3:81680897-81680916 | Msa0477480:CDS | 45.0% | |
| GGGAAGAGGTTCTTTGAATG+AGG | - | chr3_3:81680948-81680967 | Msa0477480:CDS | 45.0% | |
| TGTTAATGGAGGACATGTGG+AGG | - | chr3_3:81681020-81681039 | Msa0477480:CDS | 45.0% | |
| TGAGATTGAACCCAAGACAC+CGG | - | chr3_3:81681044-81681063 | Msa0477480:CDS | 45.0% | |
| TCAACTTTCTCCGGTGTCTT+GGG | + | chr3_3:81681057-81681076 | None:intergenic | 45.0% | |
| GGAGCATGAACATGTACATG+AGG | - | chr3_3:81681095-81681114 | Msa0477480:CDS | 45.0% | |
| TTCTAATTTCGCCGATGGTC+GGG | - | chr3_3:81681311-81681330 | Msa0477480:CDS | 45.0% | |
| ! | GTGCCCGCGATTTAAAACTT+TGG | + | chr3_3:81681405-81681424 | None:intergenic | 45.0% |
| ! | AAAGGTCTAGGACCGCAATT+TGG | + | chr3_3:81681451-81681470 | None:intergenic | 45.0% |
| ! | TCATTCAAGGGCGTATCCAA+TGG | - | chr3_3:81681613-81681632 | Msa0477480:intron | 45.0% |
| ! | CATTCAAGGGCGTATCCAAT+GGG | - | chr3_3:81681614-81681633 | Msa0477480:intron | 45.0% |
| ! | ATTCAAGGGCGTATCCAATG+GGG | - | chr3_3:81681615-81681634 | Msa0477480:intron | 45.0% |
| ! | GGACTCAACAGTTTCTGAAG+TGG | - | chr3_3:81682087-81682106 | Msa0477480:CDS | 45.0% |
| ATCGGTTACTACTAGGATGC+TGG | + | chr3_3:81682374-81682393 | None:intergenic | 45.0% | |
| CTTTCAGGATGGCCAATATG+TGG | - | chr3_3:81682717-81682736 | Msa0477480:intron | 45.0% | |
| TGAGCCAGCTATAAAGAGCT+TGG | + | chr3_3:81682928-81682947 | None:intergenic | 45.0% | |
| !!! | ATTGGTGGATTTTGGGCTCT+TGG | + | chr3_3:81683004-81683023 | None:intergenic | 45.0% |
| !!! | GGCTTGGATTGGTGGATTTT+GGG | + | chr3_3:81683011-81683030 | None:intergenic | 45.0% |
| ! | TAAAGAAGGGCTTGGATTGG+TGG | + | chr3_3:81683019-81683038 | None:intergenic | 45.0% |
| GCATAAAGAAGGGCTTGGAT+TGG | + | chr3_3:81683022-81683041 | None:intergenic | 45.0% | |
| TCCAAGCCCTTCTTTATGCA+TGG | - | chr3_3:81683023-81683042 | Msa0477480:CDS | 45.0% | |
| CCCTTCGTTGTAAATGCTTC+TGG | + | chr3_3:81683222-81683241 | None:intergenic | 45.0% | |
| !! | GTATGCTGCTTTCTTGTGTG+AGG | + | chr3_3:81683589-81683608 | None:intergenic | 45.0% |
| CATGGCATAACCGGAATGAC+CGG | + | chr3_3:81680479-81680498 | None:intergenic | 50.0% | |
| GCCATGGCTCTCAAAAACAC+CGG | - | chr3_3:81680493-81680512 | Msa0477480:three_prime_UTR | 50.0% | |
| GAGAAATTAGGCGGAAGAGG+CGG | + | chr3_3:81680640-81680659 | None:intergenic | 50.0% | |
| GGTGAGAAATTAGGCGGAAG+AGG | + | chr3_3:81680643-81680662 | None:intergenic | 50.0% | |
| GAAGCCGGTGAGAAATTAGG+CGG | + | chr3_3:81680649-81680668 | None:intergenic | 50.0% | |
| ! | ACAGAGCGTTTGAGAGAAGC+CGG | + | chr3_3:81680664-81680683 | None:intergenic | 50.0% |
| TGTAACTGCAACGACACAGG+CGG | + | chr3_3:81680694-81680713 | None:intergenic | 50.0% | |
| TGCTGTAACTGCAACGACAC+AGG | + | chr3_3:81680697-81680716 | None:intergenic | 50.0% | |
| CAGTTACAGCACCGCAAGAT+CGG | - | chr3_3:81680706-81680725 | Msa0477480:CDS | 50.0% | |
| TAATTCCACCGCCGATCTTG+CGG | + | chr3_3:81680720-81680739 | None:intergenic | 50.0% | |
| AAGATCGGCGGTGGAATTAG+TGG | - | chr3_3:81680721-81680740 | Msa0477480:CDS | 50.0% | |
| GAAGAGGTGGAAGAAGGGAA+AGG | - | chr3_3:81680760-81680779 | Msa0477480:CDS | 50.0% | |
| TTACTCCCAGAAGGAGGAGA+AGG | + | chr3_3:81680853-81680872 | None:intergenic | 50.0% | |
| ! | GTCACTTTACTCCCAGAAGG+AGG | + | chr3_3:81680859-81680878 | None:intergenic | 50.0% |
| TTCTTGGAATCCGGCAAAGG+CGG | + | chr3_3:81680889-81680908 | None:intergenic | 50.0% | |
| CGGATTCCAAGAACATGGCT+TGG | - | chr3_3:81680896-81680915 | Msa0477480:CDS | 50.0% | |
| CTCAACTTTCTCCGGTGTCT+TGG | + | chr3_3:81681058-81681077 | None:intergenic | 50.0% | |
| CAAGACACCGGAGAAAGTTG+AGG | - | chr3_3:81681056-81681075 | Msa0477480:CDS | 50.0% | |
| TCTAATTTCGCCGATGGTCG+GGG | - | chr3_3:81681312-81681331 | Msa0477480:CDS | 50.0% | |
| ! | ATCTTTTCCACCCTCCCCAT+TGG | + | chr3_3:81681632-81681651 | None:intergenic | 50.0% |
| CTGAACAAGCAGAAGAAGCG+TGG | - | chr3_3:81681983-81682002 | Msa0477480:CDS | 50.0% | |
| ! | GGCGCCAGTGTTGAATCATT+AGG | - | chr3_3:81682004-81682023 | Msa0477480:CDS | 50.0% |
| !!! | GGGCTTGGATTGGTGGATTT+TGG | + | chr3_3:81683012-81683031 | None:intergenic | 50.0% |
| GCCATGCATAAAGAAGGGCT+TGG | + | chr3_3:81683027-81683046 | None:intergenic | 50.0% | |
| GACGATCATACTTCAGCAGG+AGG | - | chr3_3:81683117-81683136 | Msa0477480:CDS | 50.0% | |
| ACAAACTGCTTCTCCGAGAC+CGG | + | chr3_3:81683286-81683305 | None:intergenic | 50.0% | |
| !!! | GCAAGCGAGTTTTGAGACTC+TGG | + | chr3_3:81683390-81683409 | None:intergenic | 50.0% |
| GAGTATAATCCGATAGCGCG+CGG | + | chr3_3:81683423-81683442 | None:intergenic | 50.0% | |
| GGGAGGATGCAGCTTAACTT+AGG | + | chr3_3:81683568-81683587 | None:intergenic | 50.0% | |
| CGGTCATTCCGGTTATGCCA+TGG | - | chr3_3:81680477-81680496 | Msa0477480:three_prime_UTR | 55.0% | |
| !! | GCCGGTGTTTTTGAGAGCCA+TGG | + | chr3_3:81680497-81680516 | None:intergenic | 55.0% |
| AGTTTCGCCGTGAGCGTAGT+CGG | + | chr3_3:81680530-81680549 | None:intergenic | 55.0% | |
| GGATCAGAATGAAGAGGCGG+TGG | + | chr3_3:81680577-81680596 | None:intergenic | 55.0% | |
| GGCGGATCAGAATGAAGAGG+CGG | + | chr3_3:81680580-81680599 | None:intergenic | 55.0% | |
| GGAGGCGGATCAGAATGAAG+AGG | + | chr3_3:81680583-81680602 | None:intergenic | 55.0% | |
| GATTCTTCCAAAGGCGGTGG+AGG | + | chr3_3:81680604-81680623 | None:intergenic | 55.0% | |
| AGGGATTCTTCCAAAGGCGG+TGG | + | chr3_3:81680607-81680626 | None:intergenic | 55.0% | |
| GGGAGGGATTCTTCCAAAGG+CGG | + | chr3_3:81680610-81680629 | None:intergenic | 55.0% | |
| GGAGGGAGGGATTCTTCCAA+AGG | + | chr3_3:81680613-81680632 | None:intergenic | 55.0% | |
| AAATTAGGCGGAAGAGGCGG+TGG | + | chr3_3:81680637-81680656 | None:intergenic | 55.0% | |
| TTACAGCACCGCAAGATCGG+CGG | - | chr3_3:81680709-81680728 | Msa0477480:CDS | 55.0% | |
| ATCGGCGGTGGAATTAGTGG+TGG | - | chr3_3:81680724-81680743 | Msa0477480:CDS | 55.0% | |
| GAGGTGGAAGAAGGGAAAGG+CGG | - | chr3_3:81680763-81680782 | Msa0477480:CDS | 55.0% | |
| ! | GGCGTCACTTTACTCCCAGA+AGG | + | chr3_3:81680862-81680881 | None:intergenic | 55.0% |
| ! | AAGGGCGTATCCAATGGGGA+GGG | - | chr3_3:81681619-81681638 | Msa0477480:intron | 55.0% |
| GGTGCGGTCGTAATGATGCT+TGG | + | chr3_3:81682831-81682850 | None:intergenic | 55.0% | |
| CATTCCAAAGCTGCACGGTG+CGG | + | chr3_3:81682847-81682866 | None:intergenic | 55.0% | |
| !! | GGTGGATTTTGGGCTCTTGG+CGG | + | chr3_3:81683001-81683020 | None:intergenic | 55.0% |
| GCAGATTTCGCTAGCTCGTC+AGG | + | chr3_3:81683070-81683089 | None:intergenic | 55.0% | |
| AAGTCGATTGCCCACGCTCA+AGG | - | chr3_3:81683472-81683491 | Msa0477480:CDS | 55.0% | |
| ! | GCTGCTTTCTTGTGTGAGGG+AGG | + | chr3_3:81683585-81683604 | None:intergenic | 55.0% |
| GGCATAACCGGAATGACCGG+CGG | + | chr3_3:81680476-81680495 | None:intergenic | 60.0% | |
| GTGAGCGTAGTCGGAGAGAG+CGG | + | chr3_3:81680521-81680540 | None:intergenic | 60.0% | |
| GCTCTCTCCGACTACGCTCA+CGG | - | chr3_3:81680520-81680539 | Msa0477480:three_prime_UTR | 60.0% | |
| TCTTCCAAAGGCGGTGGAGG+AGG | + | chr3_3:81680601-81680620 | None:intergenic | 60.0% | |
| GGCGGTGGAATTAGTGGTGG+AGG | - | chr3_3:81680727-81680746 | Msa0477480:CDS | 60.0% | |
| GGGAAAGGCGGTGATGCTGA+TGG | - | chr3_3:81680775-81680794 | Msa0477480:CDS | 60.0% | |
| CGCCACCTTCTCCTCCTTCT+GGG | - | chr3_3:81680845-81680864 | Msa0477480:CDS | 60.0% | |
| CTCCCAGAAGGAGGAGAAGG+TGG | + | chr3_3:81680850-81680869 | None:intergenic | 60.0% | |
| TTGGAATCCGGCAAAGGCGG+TGG | + | chr3_3:81680886-81680905 | None:intergenic | 60.0% | |
| ! | CAAGGGCGTATCCAATGGGG+AGG | - | chr3_3:81681618-81681637 | Msa0477480:intron | 60.0% |
| TGAGCTCTTCCGCGCGCTAT+CGG | - | chr3_3:81683411-81683430 | Msa0477480:CDS | 60.0% | |
| TCGATTGCCCACGCTCAAGG+TGG | - | chr3_3:81683475-81683494 | Msa0477480:CDS | 60.0% | |
| ATTGCCCACGCTCAAGGTGG+TGG | - | chr3_3:81683478-81683497 | Msa0477480:CDS | 60.0% | |
| AGCACCACCACCTTGAGCGT+GGG | + | chr3_3:81683485-81683504 | None:intergenic | 60.0% | |
| TCCAAAGGCGGTGGAGGAGG+CGG | + | chr3_3:81680598-81680617 | None:intergenic | 65.0% | |
| AAGAGGCGGTGGAGGAGGGA+GGG | + | chr3_3:81680626-81680645 | None:intergenic | 65.0% | |
| TTAGGCGGAAGAGGCGGTGG+AGG | + | chr3_3:81680634-81680653 | None:intergenic | 65.0% | |
| ! | TGAGGCGCGTGAGAAGCGTG+AGG | + | chr3_3:81680814-81680833 | None:intergenic | 65.0% |
| GCGCCACCTTCTCCTCCTTC+TGG | - | chr3_3:81680844-81680863 | Msa0477480:CDS | 65.0% | |
| GAATCCGGCAAAGGCGGTGG+CGG | + | chr3_3:81680883-81680902 | None:intergenic | 65.0% | |
| GGCGTATCCAATGGGGAGGG+TGG | - | chr3_3:81681622-81681641 | Msa0477480:intron | 65.0% | |
| ACGACCGCACCGTGCAGCTT+TGG | - | chr3_3:81682840-81682859 | Msa0477480:CDS | 65.0% | |
| GATAGCGCGCGGAAGAGCTC+AGG | + | chr3_3:81683412-81683431 | None:intergenic | 65.0% | |
| CAGCACCACCACCTTGAGCG+TGG | + | chr3_3:81683486-81683505 | None:intergenic | 65.0% | |
| GCTCGTAACGCCTTCGCCGC+CGG | - | chr3_3:81680457-81680476 | Msa0477480:three_prime_UTR | 70.0% | |
| GCCTTCGCCGCCGGTCATTC+CGG | - | chr3_3:81680466-81680485 | Msa0477480:three_prime_UTR | 70.0% | |
| ACCGGAATGACCGGCGGCGA+AGG | + | chr3_3:81680470-81680489 | None:intergenic | 70.0% | |
| GTAGTCGGAGAGAGCGGCGC+CGG | + | chr3_3:81680515-81680534 | None:intergenic | 70.0% | |
| TCCGCCTCCTCCACCGCCTT+TGG | - | chr3_3:81680594-81680613 | Msa0477480:CDS | 70.0% | |
| GAAGAGGCGGTGGAGGAGGG+AGG | + | chr3_3:81680627-81680646 | None:intergenic | 70.0% | |
| GCGGAAGAGGCGGTGGAGGA+GGG | + | chr3_3:81680630-81680649 | None:intergenic | 70.0% | |
| CAGCACCGCAAGATCGGCGG+TGG | - | chr3_3:81680712-81680731 | Msa0477480:CDS | 70.0% | |
| ! | GGTGGCGCGTGAGAAGCGTG+AGG | + | chr3_3:81680832-81680851 | None:intergenic | 70.0% |
| GGCGGAAGAGGCGGTGGAGG+AGG | + | chr3_3:81680631-81680650 | None:intergenic | 75.0% | |
| GACGCCGCCACCGCCTTTGC+CGG | - | chr3_3:81680876-81680895 | Msa0477480:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81680339 | 81683753 | 81680339 | ID=Msa0477480;Name=Msa0477480 |
| chr3_3 | mRNA | 81680339 | 81683753 | 81680339 | ID=Msa0477480-mRNA-1;Parent=Msa0477480;Name=Msa0477480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=31|1|1|1|1|1|4|243|716 |
| chr3_3 | exon | 81680339 | 81681368 | 81680339 | ID=Msa0477480-mRNA-1:exon:22566;Parent=Msa0477480-mRNA-1 |
| chr3_3 | exon | 81681931 | 81682154 | 81681931 | ID=Msa0477480-mRNA-1:exon:22565;Parent=Msa0477480-mRNA-1 |
| chr3_3 | exon | 81682354 | 81682529 | 81682354 | ID=Msa0477480-mRNA-1:exon:22564;Parent=Msa0477480-mRNA-1 |
| chr3_3 | exon | 81682759 | 81683753 | 81682759 | ID=Msa0477480-mRNA-1:exon:22563;Parent=Msa0477480-mRNA-1 |
| chr3_3 | five_prime_UTR | 81683723 | 81683753 | 81683723 | ID=Msa0477480-mRNA-1:five_prime_utr;Parent=Msa0477480-mRNA-1 |
| chr3_3 | CDS | 81682759 | 81683722 | 81682759 | ID=Msa0477480-mRNA-1:cds;Parent=Msa0477480-mRNA-1 |
| chr3_3 | CDS | 81682354 | 81682529 | 81682354 | ID=Msa0477480-mRNA-1:cds;Parent=Msa0477480-mRNA-1 |
| chr3_3 | CDS | 81681931 | 81682154 | 81681931 | ID=Msa0477480-mRNA-1:cds;Parent=Msa0477480-mRNA-1 |
| chr3_3 | CDS | 81680582 | 81681368 | 81680582 | ID=Msa0477480-mRNA-1:cds;Parent=Msa0477480-mRNA-1 |
| chr3_3 | three_prime_UTR | 81680339 | 81680581 | 81680339 | ID=Msa0477480-mRNA-1:three_prime_utr;Parent=Msa0477480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
