AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0825920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825920 MtrunA17_Chr5g0448331 91.396 709 29 2 1 708 1 678 0.0 1272
Msa0825920 MtrunA17_Chr8g0389931 78.736 696 107 6 4 697 1 657 0.0 1082
Msa0825920 MtrunA17_Chr3g0143561 55.252 476 104 7 36 511 25 391 8.83e-174 503
Msa0825920 MtrunA17_Chr6g0470171 63.542 96 27 2 194 289 84 171 6.87e-30 116
Msa0825920 MtrunA17_Chr6g0470171 53.684 95 42 1 50 144 8 100 3.15e-24 100
Msa0825920 MtrunA17_Chr6g0476111 35.789 190 104 7 297 474 223 406 1.55e-21 99.8
Msa0825920 MtrunA17_Chr7g0252211 35.602 191 104 7 297 474 285 469 6.77e-20 94.7
Msa0825920 MtrunA17_Chr6g0470181 62.687 67 20 2 379 443 1 64 9.56e-20 83.6
Msa0825920 MtrunA17_Chr6g0476121 34.211 190 107 6 297 474 172 355 1.12e-19 93.6
Msa0825920 MtrunA17_Chr1g0163051 37.179 156 85 3 297 445 217 366 1.40e-18 90.1
Msa0825920 MtrunA17_Chr4g0003501 34.615 156 85 4 297 446 512 656 1.76e-16 84.0
Msa0825920 MtrunA17_Chr8g0368901 37.342 158 85 4 297 445 325 477 3.15e-16 82.8
Msa0825920 MtrunA17_Chr8g0369301 36.076 158 87 4 297 445 305 457 4.62e-16 82.4
Msa0825920 MtrunA17_Chr8g0368911 34.810 158 89 3 297 445 318 470 1.01e-15 81.3
Msa0825920 MtrunA17_Chr7g0255181 32.716 162 91 4 297 450 263 414 6.80e-15 78.6
Msa0825920 MtrunA17_Chr5g0399801 33.333 153 91 3 297 446 643 787 1.47e-14 77.8
Msa0825920 MtrunA17_Chr1g0163041 34.177 158 89 5 297 445 134 285 9.89e-13 71.2
Msa0825920 MtrunA17_Chr6g0467531 32.911 158 85 5 297 446 137 281 9.67e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825920 AT1G57820.1 58.247 673 224 9 7 661 6 639 0.0 773
Msa0825920 AT1G57820.3 58.247 673 224 9 7 661 6 639 0.0 773
Msa0825920 AT1G57820.2 57.801 673 224 10 7 661 6 636 0.0 761
Msa0825920 AT5G39550.1 57.524 638 207 11 4 631 3 586 0.0 708
Msa0825920 AT1G57800.2 54.357 677 270 15 7 666 6 660 0.0 706
Msa0825920 AT1G66050.1 58.347 629 201 10 4 622 3 580 0.0 703
Msa0825920 AT1G66040.1 58.347 629 201 10 4 622 3 580 0.0 702
Msa0825920 AT1G57800.1 53.994 676 270 15 7 666 6 656 0.0 697
Msa0825920 AT4G08590.2 49.227 453 170 9 60 498 24 430 4.72e-145 432
Msa0825920 AT4G08590.1 49.339 454 169 10 60 498 24 431 5.42e-144 429
Msa0825920 AT4G08590.6 48.980 441 164 10 60 485 24 418 1.59e-137 411
Msa0825920 AT4G08590.3 48.276 406 147 11 60 449 24 382 3.54e-119 363
Msa0825920 AT4G08590.4 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0825920 AT4G08590.5 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0825920 AT5G13960.1 31.429 245 132 8 297 525 153 377 2.12e-18 90.1
Msa0825920 AT5G13960.2 31.429 245 132 8 297 525 19 243 2.26e-18 89.4
Msa0825920 AT2G22740.2 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0825920 AT2G22740.1 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0825920 AT2G35160.5 34.375 192 105 7 297 478 333 513 1.81e-16 84.3
Msa0825920 AT2G35160.2 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0825920 AT2G35160.3 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0825920 AT2G35160.1 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0825920 AT2G35160.4 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0825920 AT5G04940.2 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0825920 AT5G04940.1 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0825920 AT2G33290.1 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0825920 AT2G33290.3 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0825920 AT2G33290.4 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0825920 AT2G33290.2 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0825920 AT4G13460.1 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0825920 AT4G13460.2 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0825920 AT1G73100.1 35.032 157 87 5 297 446 212 360 1.02e-11 68.9
Msa0825920 AT1G17770.1 31.707 164 88 5 297 449 231 381 4.12e-11 67.0

Find 215 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGATATTTACTGGATT+TGG 0.158578 5_3:-66029395 Msa0825920:three_prime_UTR
ACTGAAGGATGTTAGATATT+TGG 0.160677 5_3:-66032822 Msa0825920:intron
CCCCATGTTGCTGGCATTGC+TGG 0.208993 5_3:-66032196 Msa0825920:CDS
GCCAACTGTGCGTTGATTCT+TGG 0.223531 5_3:+66032511 None:intergenic
ACTATCCCAAAGGATCATTT+TGG 0.243586 5_3:-66032319 Msa0825920:CDS
GCTGCTGCTCCGTCTGTTGC+GGG 0.276350 5_3:-66033811 Msa0825920:CDS
TATTTACTGGATTTGGGAAT+TGG 0.289664 5_3:-66029388 Msa0825920:three_prime_UTR
AGTTTGAGAAAGATATTTAC+TGG 0.293829 5_3:-66029401 Msa0825920:three_prime_UTR
GAAAGATATTTACTGGATTT+GGG 0.294529 5_3:-66029394 Msa0825920:three_prime_UTR
GAACAGATGGAGGAGAATTC+TGG 0.311936 5_3:-66029805 Msa0825920:CDS
GGCTCAATCTGTCGCTCTCT+CGG 0.312147 5_3:-66032158 Msa0825920:CDS
GGGTTCTTGTTGGTGATACT+TGG 0.318104 5_3:-66032258 Msa0825920:CDS
TAAAATGTGATGTTGTAAAA+TGG 0.323953 5_3:+66034056 None:intergenic
AAGGACGGCTTTATAGCTTT+TGG 0.324277 5_3:+66030926 None:intergenic
TCACTTGTTGTTGGAACAAC+AGG 0.341153 5_3:+66033889 None:intergenic
AGAACCCCACGGTTCCTATT+AGG 0.346266 5_3:+66032274 None:intergenic
TTTCTGGCCAAAGCTATATC+AGG 0.361815 5_3:-66030645 Msa0825920:CDS
GAGATCCCTTCCACCGCTTC+CGG 0.367014 5_3:+66032090 None:intergenic
GTGATGTTGTAAAATGGTTT+TGG 0.369662 5_3:+66034062 None:intergenic
ATCGGTCCAAAATGATCCTT+TGG 0.370324 5_3:+66032313 None:intergenic
TCGTATCTCACTCCTGCTTC+CGG 0.373745 5_3:+66031750 None:intergenic
TTGATCTGCAGTGATTTAAC+TGG 0.374427 5_3:-66031396 Msa0825920:intron
GTCTACATTTCAGGAGGAAA+AGG 0.376345 5_3:-66031041 Msa0825920:intron
AGAAGGATGAGGTTATTGTT+AGG 0.376741 5_3:-66033687 Msa0825920:CDS
CCCTGTTCCTGATATAGCTT+TGG 0.380875 5_3:+66030638 None:intergenic
GCCAAAGCTATATCAGGAAC+AGG 0.381465 5_3:-66030639 Msa0825920:CDS
TTGCTGAGTATGATCCTAAT+AGG 0.386285 5_3:-66032288 Msa0825920:CDS
ACAGCATGAGTTAATACAAC+AGG 0.395011 5_3:-66029520 Msa0825920:three_prime_UTR
GCTATCCTGTTCGTGTTGTT+AGG 0.395823 5_3:-66031979 Msa0825920:intron
TTTACAACATCATTCATTCA+TGG 0.396882 5_3:-66034037 Msa0825920:exon
GGTGTTCTTGATATCTTTGA+TGG 0.400107 5_3:-66033658 Msa0825920:CDS
TCAGTGGTGTAGCATGTGTC+AGG 0.405321 5_3:+66032394 None:intergenic
TTCATCGGCTTCTTACTTTG+TGG 0.409729 5_3:+66030992 None:intergenic
TCCTGCTTCCGGTGCATAAG+AGG 0.411847 5_3:+66031761 None:intergenic
GAGACCTCGGTCTCTTCATC+CGG 0.413934 5_3:+66029748 None:intergenic
CTAACAATACAAACTTGTTC+AGG 0.415037 5_3:+66032731 None:intergenic
CTTGGATTAGTCGCCATCTT+CGG 0.417258 5_3:+66032529 None:intergenic
GCCATTTCTCAAAACACTTC+AGG 0.422976 5_3:+66032599 None:intergenic
CCTGTTGTTCAGCCTGTCGC+TGG 0.422987 5_3:+66029830 None:intergenic
TCGGCTTCTTACTTTGTGGT+GGG 0.424543 5_3:+66030996 None:intergenic
ACCTACTGTTAAGGAGTTCA+AGG 0.426796 5_3:-66031355 Msa0825920:CDS
ACAGGTTAACAGGGAAATGA+TGG 0.429592 5_3:-66029869 Msa0825920:intron
CCAGCGACAGGCTGAACAAC+AGG 0.433445 5_3:-66029830 Msa0825920:CDS
TAGGATGGAATGTAGGCAAT+GGG 0.434316 5_3:-66032230 Msa0825920:CDS
CAAACTTCTGGTCAAATGAC+TGG 0.435386 5_3:+66032041 None:intergenic
CAACTTCTGCAAAGGCTGCT+TGG 0.436051 5_3:-66030677 Msa0825920:CDS
TCGAGCATTTCACTTGTTGT+TGG 0.442853 5_3:+66033880 None:intergenic
CCTTTCTTCTTCTTCTGTGG+AGG 0.445223 5_3:+66029667 None:intergenic
TCACCTTTCTTCTTCTTCTG+TGG 0.446054 5_3:+66029664 None:intergenic
TCCTCTTATGCACCGGAAGC+AGG 0.456225 5_3:-66031762 Msa0825920:CDS
ATCGGCTTCTTACTTTGTGG+TGG 0.457795 5_3:+66030995 None:intergenic
AAACAGTGGCTTGCAATTAG+AGG 0.458150 5_3:-66029582 Msa0825920:exon
TGATACTTGGGAGGATAGGA+TGG 0.459421 5_3:-66032245 Msa0825920:CDS
ATCAACCTTGTCCATGGAGC+TGG 0.459843 5_3:+66031517 None:intergenic
GGTTCTTGTTGGTGATACTT+GGG 0.460044 5_3:-66032257 Msa0825920:CDS
TGCTGCTGCTCCGTCTGTTG+CGG 0.460459 5_3:-66033812 Msa0825920:CDS
TTGCGAACCAGTTGCCGAAA+AGG 0.463278 5_3:-66032001 Msa0825920:CDS
ACCCTCTGCCCTAGCTAGCT+TGG 0.468975 5_3:+66032471 None:intergenic
GAGAAATGTTGGCGCAAAGT+TGG 0.471436 5_3:-66031711 Msa0825920:CDS
ACTGAGAGAGCAAAGAAAAC+AGG 0.475684 5_3:-66032376 Msa0825920:CDS
CTTACAGTAACAGGTCTCTC+AGG 0.475890 5_3:+66033604 None:intergenic
CCCTAGCTAGCTTGGCCATA+CGG 0.475905 5_3:+66032479 None:intergenic
GGCTTCTTACTTTGTGGTGG+GGG 0.477531 5_3:+66030998 None:intergenic
TTCTGCAAAGGCTGCTTGGA+GGG 0.479805 5_3:-66030673 Msa0825920:CDS
ACGAACCTAACAACACGAAC+AGG 0.481034 5_3:+66031974 None:intergenic
CTCAGCTATGTCAGTTGCAC+AGG 0.481756 5_3:+66030561 None:intergenic
GCTCAATCTGTCGCTCTCTC+GGG 0.483213 5_3:-66032157 Msa0825920:CDS
CAATATCTGTCGCAAGGTGT+TGG 0.483430 5_3:-66030728 Msa0825920:CDS
TGAGAATGATCCTTCGTTGA+CGG 0.484846 5_3:-66033761 Msa0825920:CDS
TCGCCCACTACCTACTGTTA+AGG 0.485754 5_3:-66031364 Msa0825920:CDS
GACTGCAATTCCACCGAAGA+TGG 0.491750 5_3:-66032542 Msa0825920:CDS
GATATAGCTTTGGCCAGAAA+AGG 0.492720 5_3:+66030648 None:intergenic
TATGTAGACGACGAGGATCA+TGG 0.492748 5_3:-66032130 Msa0825920:CDS
CTCAGGCAACTGCATACAAA+AGG 0.493682 5_3:+66033621 None:intergenic
GAGGTTATTGTTAGGAGAAG+TGG 0.495866 5_3:-66033679 Msa0825920:CDS
AACTCCTTAACAGTAGGTAG+TGG 0.497268 5_3:+66031360 None:intergenic
TCTACATTTCAGGAGGAAAA+GGG 0.498002 5_3:-66031040 Msa0825920:intron
AGGAAAAGGGCTGTTGGCTG+TGG 0.498699 5_3:-66031027 Msa0825920:CDS
CTCAAAGTGGACGCAGTTTG+CGG 0.499275 5_3:-66030612 Msa0825920:CDS
TCACTTGGTTGAGCACAATC+AGG 0.500895 5_3:+66033847 None:intergenic
TTCCACCGCTTCCGGTGTAA+AGG 0.500920 5_3:+66032098 None:intergenic
TGAGCACAAGGTGTAGTAAG+AGG 0.501591 5_3:+66030700 None:intergenic
GAAGTTTGAAAATATGAATG+AGG 0.501935 5_3:-66032026 Msa0825920:CDS
CAACAAGTGAAATGCTCGAT+TGG 0.502883 5_3:-66033876 Msa0825920:CDS
CGTTGATATTACTGAAAGAA+AGG 0.503780 5_3:-66031328 Msa0825920:CDS
TTGGTGATACTTGGGAGGAT+AGG 0.509145 5_3:-66032249 Msa0825920:CDS
AGAGGAACGTTTCTCCTTGT+GGG 0.509810 5_3:+66031779 None:intergenic
AGGAACCGTGGGGTTCTTGT+TGG 0.510062 5_3:-66032268 Msa0825920:CDS
ATTGCTGGTCAGAGTACCTA+CGG 0.510813 5_3:-66032181 Msa0825920:CDS
AACATGCCATGGTGCTGTGC+AGG 0.512754 5_3:+66033921 None:intergenic
ACCAGCAATGCCAGCAACAT+GGG 0.512898 5_3:+66032195 None:intergenic
AACATATGATAGCTATAGAT+AGG 0.514835 5_3:+66029349 None:intergenic
TGGTTCCTTTACACCGGAAG+CGG 0.515629 5_3:-66032103 Msa0825920:CDS
ATGTAGACGACGAGGATCAT+GGG 0.519044 5_3:-66032129 Msa0825920:CDS
TGAAGTGTTTCGGTTTCTGA+TGG 0.520576 5_3:+66033952 None:intergenic
CTTCTGCAAAGGCTGCTTGG+AGG 0.520625 5_3:-66030674 Msa0825920:CDS
GCTAGGGCAGAGGGTGTTGG+TGG 0.520678 5_3:-66032463 Msa0825920:CDS
AAGAAGAAGAAAGGTGATGA+TGG 0.520820 5_3:-66029658 Msa0825920:CDS
CTGCTGCTCCGTCTGTTGCG+GGG 0.521108 5_3:-66033810 Msa0825920:CDS
AAAGCCGTCCTTCAAAATCA+AGG 0.522404 5_3:-66030915 Msa0825920:CDS
CTATTATTTGCTCAAAGACA+AGG 0.523069 5_3:-66029465 Msa0825920:three_prime_UTR
AACGAACTTGCTCAAACTGC+AGG 0.523430 5_3:-66032564 Msa0825920:CDS
AAAGAAAGGATGATCCATCA+TGG 0.523766 5_3:-66031314 Msa0825920:CDS
GGAAAGGCTAATGCTTGCAG+TGG 0.524369 5_3:-66032355 Msa0825920:CDS
TTCAGGAGGAAAAGGGCTGT+TGG 0.527911 5_3:-66031033 Msa0825920:intron
TATACAGAATTGAGAAATGT+TGG 0.531104 5_3:-66031722 Msa0825920:CDS
TTGCTGGTCAGAGTACCTAC+GGG 0.532070 5_3:-66032180 Msa0825920:CDS
GATAGAATCACTCCAGCGAC+AGG 0.535002 5_3:-66029842 Msa0825920:CDS
AAGAGGAACGTTTCTCCTTG+TGG 0.535286 5_3:+66031778 None:intergenic
CCTCCACAGAAGAAGAAGAA+AGG 0.537509 5_3:-66029667 Msa0825920:CDS
CGGCTTCTTACTTTGTGGTG+GGG 0.538312 5_3:+66030997 None:intergenic
TCGGTCCAAAATGATCCTTT+GGG 0.540321 5_3:+66032314 None:intergenic
TGCTGCTCCGTCTGTTGCGG+GGG 0.540490 5_3:-66033809 Msa0825920:CDS
TTTACACCGGAAGCGGTGGA+AGG 0.542736 5_3:-66032096 Msa0825920:CDS
CTAGCTAGGGCAGAGGGTGT+TGG 0.546860 5_3:-66032466 Msa0825920:CDS
GACCAGCAATGCCAGCAACA+TGG 0.551617 5_3:+66032194 None:intergenic
GATAGGGTCATAAGGTCTGC+AGG 0.554621 5_3:-66031567 Msa0825920:intron
TTGCAGAAGTTGTGAGCACA+AGG 0.559804 5_3:+66030688 None:intergenic
GAGTGAAGAAAATGACAAGC+CGG 0.561110 5_3:-66029767 Msa0825920:CDS
AGGCAGAAATTGTGCCCACA+TGG 0.561703 5_3:+66032619 None:intergenic
GAGCACAAGGTGTAGTAAGA+GGG 0.563587 5_3:+66030701 None:intergenic
TTCTCTTCCTCCGTCAACGA+AGG 0.565587 5_3:+66033751 None:intergenic
TCTTGTTGGTGATACTTGGG+AGG 0.566196 5_3:-66032254 Msa0825920:CDS
ACAAATTGATGAGGCTGGAG+TGG 0.566569 5_3:-66029611 Msa0825920:CDS
GGATTAGTCGCCATCTTCGG+TGG 0.567166 5_3:+66032532 None:intergenic
TTTGAGAAATGGCTTGGGCA+AGG 0.567925 5_3:-66032589 Msa0825920:CDS
GCGGTGGAAGGGATCTCAGT+GGG 0.568471 5_3:-66032084 Msa0825920:CDS
CACCTTCCTTGTGACGCTGA+CGG 0.569974 5_3:-66034000 Msa0825920:CDS
ATCTTTGAAAGAGAAGGATG+AGG 0.574241 5_3:-66033698 Msa0825920:CDS
CTTACATCAAAGTCCCATGA+TGG 0.576030 5_3:+66031300 None:intergenic
TTCCTTTACACCGGAAGCGG+TGG 0.576676 5_3:-66032100 Msa0825920:CDS
GTTGGAACAACAGGGAGACA+TGG 0.578356 5_3:+66033898 None:intergenic
GGGAGGATAGGATGGAATGT+AGG 0.579330 5_3:-66032237 Msa0825920:CDS
CTTTCTTTCAGTAATATCAA+CGG 0.579868 5_3:+66031329 None:intergenic
ATGATCCTAATAGGAACCGT+GGG 0.580583 5_3:-66032279 Msa0825920:CDS
TGGTGGATCTTTGAAAGAGA+AGG 0.582483 5_3:-66033704 Msa0825920:CDS
GAGGAACAAATTGATGAGGC+TGG 0.582753 5_3:-66029616 Msa0825920:CDS
AAGCAGGAGTGAGATACGAT+GGG 0.584452 5_3:-66031746 Msa0825920:CDS
GCTTGCAATTAGAGGTGGAT+CGG 0.585170 5_3:-66029574 Msa0825920:exon
TCTGCAGGTATTTGTTTGTG+AGG 0.586985 5_3:-66031552 Msa0825920:CDS
CGTCCTTCAAAATCAAGGAT+AGG 0.587442 5_3:-66030910 Msa0825920:CDS
GAAACGTTCCTCTTATGCAC+CGG 0.590337 5_3:-66031769 Msa0825920:CDS
CAGTAGGTAGTGGGCGAGGA+CGG 0.590658 5_3:+66031370 None:intergenic
GTGACAATGAGCCAGCTCCA+TGG 0.592691 5_3:-66031528 Msa0825920:CDS
GCCAAGCTAGCTAGGGCAGA+GGG 0.594474 5_3:-66032472 Msa0825920:CDS
ATGAGCCAGCTCCATGGACA+AGG 0.595160 5_3:-66031522 Msa0825920:intron
ATCAAGGATAGGCTATTGAA+AGG 0.595479 5_3:-66030899 Msa0825920:intron
TCCAAGAATCAACGCACAGT+TGG 0.595787 5_3:-66032512 Msa0825920:CDS
ATAGGATGGAATGTAGGCAA+TGG 0.595954 5_3:-66032231 Msa0825920:CDS
AAAGGATCCACAATGTTCAT+CGG 0.596534 5_3:+66030977 None:intergenic
TTACACCGGAAGCGGTGGAA+GGG 0.597699 5_3:-66032095 Msa0825920:CDS
AAGAAAGGATGATCCATCAT+GGG 0.600210 5_3:-66031313 Msa0825920:CDS
CACCGTCAGCGTCACAAGGA+AGG 0.600954 5_3:+66033998 None:intergenic
AGCACAAGGTGTAGTAAGAG+GGG 0.602277 5_3:+66030702 None:intergenic
CAGTGGCTTGCAATTAGAGG+TGG 0.602583 5_3:-66029579 Msa0825920:exon
ATTCTCAATAGCGCGAATAG+CGG 0.603171 5_3:+66033777 None:intergenic
GAAGCAGGAGTGAGATACGA+TGG 0.604687 5_3:-66031747 Msa0825920:CDS
AGGAACAGGGCGACTCAAAG+TGG 0.605619 5_3:-66030625 Msa0825920:CDS
TGACGCTGACGGTGTATGCA+TGG 0.605697 5_3:-66033989 Msa0825920:CDS
GAAGAAAGGTGATGATGGCA+AGG 0.606822 5_3:-66029653 Msa0825920:CDS
CAGGTTAACAGGGAAATGAT+GGG 0.608219 5_3:-66029868 Msa0825920:CDS
CAATCTGTCGCTCTCTCGGG+TGG 0.608341 5_3:-66032154 Msa0825920:CDS
GGCCAAGCTAGCTAGGGCAG+AGG 0.611782 5_3:-66032473 Msa0825920:CDS
TGTGCTCACAACTTCTGCAA+AGG 0.612302 5_3:-66030685 Msa0825920:CDS
GCAGCAGCAACAACATCACT+TGG 0.612364 5_3:+66033832 None:intergenic
TGAGTATCTTCAGAATCCAC+AGG 0.613570 5_3:-66030542 Msa0825920:intron
TTGTTGGTTCAGACTCCATG+TGG 0.613959 5_3:-66032634 Msa0825920:intron
GGGGAGTGGTTCCTTTACAC+CGG 0.614315 5_3:-66032109 Msa0825920:CDS
CAGTGGTGTAGCATGTGTCA+GGG 0.615057 5_3:+66032395 None:intergenic
GGATCATACTCAGCAAGGAT+CGG 0.615543 5_3:+66032295 None:intergenic
TGGTTGCAATATCTGTCGCA+AGG 0.615751 5_3:-66030734 Msa0825920:CDS
GGGAGACATGGAACATGCCA+TGG 0.619691 5_3:+66033910 None:intergenic
CCGTATGGCCAAGCTAGCTA+GGG 0.621370 5_3:-66032479 Msa0825920:CDS
TAAGAAGCCGATGAACATTG+TGG 0.621417 5_3:-66030984 Msa0825920:CDS
AGGTGATGATGGCAAGGCTG+TGG 0.621772 5_3:-66029647 Msa0825920:CDS
CACTTGTTGTTGGAACAACA+GGG 0.621855 5_3:+66033890 None:intergenic
TGAACAACAGGAAGAACAGA+TGG 0.623198 5_3:-66029818 Msa0825920:CDS
CAGCATGAGTTAATACAACA+GGG 0.623416 5_3:-66029519 Msa0825920:three_prime_UTR
TATTAGGATCATACTCAGCA+AGG 0.623524 5_3:+66032290 None:intergenic
GAATGATCCTTCGTTGACGG+AGG 0.625010 5_3:-66033758 Msa0825920:CDS
TGGCAAGGCTGTGGTGAATG+TGG 0.625687 5_3:-66029638 Msa0825920:CDS
ACGACGAGGATCATGGGGAG+TGG 0.626547 5_3:-66032123 Msa0825920:CDS
GAGAGCAAAGAAAACAGGAA+AGG 0.626777 5_3:-66032371 Msa0825920:CDS
TTAACAGTAGGTAGTGGGCG+AGG 0.626993 5_3:+66031366 None:intergenic
GAAAGGCTAATGCTTGCAGT+GGG 0.626997 5_3:-66032354 Msa0825920:CDS
TATGATCCTAATAGGAACCG+TGG 0.637653 5_3:-66032280 Msa0825920:CDS
AATCTTCGTGACTATCCCAA+AGG 0.640437 5_3:-66032329 Msa0825920:CDS
AAGAAACGTCAAGAGTTACA+TGG 0.640610 5_3:-66033724 Msa0825920:CDS
TATTTGGTTCAGGTCCCACA+AGG 0.642027 5_3:-66031793 Msa0825920:intron
CCCTTGAACTCCTTAACAGT+AGG 0.642926 5_3:+66031354 None:intergenic
CGTCAGCGTCACAAGGAAGG+TGG 0.649031 5_3:+66034001 None:intergenic
CCAAAGCTATATCAGGAACA+GGG 0.649568 5_3:-66030638 Msa0825920:CDS
GCTATGTCAGTTGCACAGGT+AGG 0.652259 5_3:+66030565 None:intergenic
GTTGGCGATTGCGATCCGTA+TGG 0.654592 5_3:-66032494 Msa0825920:CDS
TGTAGACGACGAGGATCATG+GGG 0.654974 5_3:-66032128 Msa0825920:CDS
ACTCCTTAACAGTAGGTAGT+GGG 0.656580 5_3:+66031361 None:intergenic
CCAGCAATGCCAGCAACATG+GGG 0.663982 5_3:+66032196 None:intergenic
GCAAAACCTGCACAGCACCA+TGG 0.665753 5_3:-66033927 Msa0825920:CDS
ACAACAGGAAGAACAGATGG+AGG 0.670527 5_3:-66029815 Msa0825920:CDS
TGTTGGTTCAGACTCCATGT+GGG 0.679292 5_3:-66032633 Msa0825920:intron
CATACACCGTCAGCGTCACA+AGG 0.681538 5_3:+66033994 None:intergenic
AGGATGGAATGTAGGCAATG+GGG 0.694397 5_3:-66032229 Msa0825920:CDS
CCTACTGTTAAGGAGTTCAA+GGG 0.697230 5_3:-66031354 Msa0825920:CDS
TGTGGAGGAACAAATTGATG+AGG 0.702307 5_3:-66029620 Msa0825920:CDS
AAACGTCAAGAGTTACATGG+TGG 0.708724 5_3:-66033721 Msa0825920:CDS
TGGAGTGGAAAGCAAAACAG+TGG 0.708838 5_3:-66029596 Msa0825920:CDS
AGCAGGAGTGAGATACGATG+GGG 0.713889 5_3:-66031745 Msa0825920:CDS
CAAGGCTGTGGTGAATGTGG+AGG 0.722052 5_3:-66029635 Msa0825920:CDS
CAAGCCGGATGAAGAGACCG+AGG 0.726337 5_3:-66029752 Msa0825920:CDS
AGTCGTGGAGGAAATTAACG+AGG 0.732114 5_3:-66029701 Msa0825920:CDS
AGCGGTGGAAGGGATCTCAG+TGG 0.736744 5_3:-66032085 Msa0825920:CDS
TATCACCAACAAGAACCCCA+CGG 0.739370 5_3:+66032263 None:intergenic
TGCTGGTCAGAGTACCTACG+GGG 0.755559 5_3:-66032179 Msa0825920:CDS
TGATCCTAATAGGAACCGTG+GGG 0.767429 5_3:-66032278 Msa0825920:CDS
GGGTGGTTATGTAGACGACG+AGG 0.777978 5_3:-66032137 Msa0825920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTTAAAAAAACAAAA+AGG + chr5_3:66029846-66029865 None:intergenic 10.0%
!! TTCAATTAAAATATAATCAT+TGG + chr5_3:66030357-66030376 None:intergenic 10.0%
!!! CAATTATTAAGTTTAAATTT+TGG - chr5_3:66032253-66032272 Msa0825920:CDS 10.0%
!!! ATATTTGTTTTAATCAATTA+TGG - chr5_3:66033028-66033047 Msa0825920:intron 10.0%
!!! AATCCATTTTAATTAGTAAA+GGG + chr5_3:66030262-66030281 None:intergenic 15.0%
!!! TAATCCATTTTAATTAGTAA+AGG + chr5_3:66030263-66030282 None:intergenic 15.0%
!!! TTAAAATATAATCATTGGTT+AGG + chr5_3:66030352-66030371 None:intergenic 15.0%
!! TAAAATGTGATGTTGTAAAA+TGG + chr5_3:66029348-66029367 None:intergenic 20.0%
!! ACAAAAAGGGTAAAAATTTA+AGG + chr5_3:66029832-66029851 None:intergenic 20.0%
!! TAACAAAAACAAACTAAGTT+AGG + chr5_3:66030130-66030149 None:intergenic 20.0%
!!! TAACTTAGTTTGTTTTTGTT+AGG - chr5_3:66030129-66030148 Msa0825920:intron 20.0%
!!! ATCCATTTTAATTAGTAAAG+GGG + chr5_3:66030261-66030280 None:intergenic 20.0%
!! ATTGAAGTGTGTTAAATATT+TGG - chr5_3:66030371-66030390 Msa0825920:intron 20.0%
!!! TTGAACAATACAAACTTTTT+AGG + chr5_3:66030536-66030555 None:intergenic 20.0%
!!! ACCAATTTAATTTTAACTGA+AGG - chr5_3:66030564-66030583 Msa0825920:CDS 20.0%
!! TCCTTCAGTTAAAATTAAAT+TGG + chr5_3:66030568-66030587 None:intergenic 20.0%
!!! AGAACAACTTGATAATTTTT+TGG + chr5_3:66030974-66030993 None:intergenic 20.0%
!!! TGATTAATTGATTCCTTATT+AGG - chr5_3:66031529-66031548 Msa0825920:CDS 20.0%
!!! AACTTTTATTTTTCCTATCT+GGG - chr5_3:66031918-66031937 Msa0825920:intron 20.0%
!!! TTTTATTAGCCTAGTTTTTA+GGG - chr5_3:66032948-66032967 Msa0825920:intron 20.0%
!! TTAATAATCATATTGATGTC+AGG - chr5_3:66033001-66033020 Msa0825920:intron 20.0%
!! AGATTAGGAATACAATTAAA+AGG + chr5_3:66033093-66033112 None:intergenic 20.0%
!!! TCAATATTTTAAGTACCTAA+AGG + chr5_3:66033272-66033291 None:intergenic 20.0%
!!! TGAAAATGTTTGAAGTTTTT+TGG - chr5_3:66033337-66033356 Msa0825920:intron 20.0%
!!! CTTATTTATGATCTTTTAAC+AGG - chr5_3:66033514-66033533 Msa0825920:intron 20.0%
!!! TTGTAAAATGGTTTTGGTTT+TGG + chr5_3:66029336-66029355 None:intergenic 25.0%
! TTTACAACATCATTCATTCA+TGG - chr5_3:66029364-66029383 Msa0825920:three_prime_UTR 25.0%
! AAAAAAAAGCTTACAGTAAC+AGG + chr5_3:66029809-66029828 None:intergenic 25.0%
! ACTGAAGTGTGTTAAATATT+TGG - chr5_3:66030003-66030022 Msa0825920:intron 25.0%
!!! TCCATTTTAATTAGTAAAGG+GGG + chr5_3:66030260-66030279 None:intergenic 25.0%
!!! AAACTTTTTAGGTCATCTAA+AGG + chr5_3:66030525-66030544 None:intergenic 25.0%
!! CATTCATATTTTCAAACTTC+TGG + chr5_3:66031375-66031394 None:intergenic 25.0%
! GAAGTTTGAAAATATGAATG+AGG - chr5_3:66031375-66031394 Msa0825920:CDS 25.0%
! ACAGATCTAACAAACTAATA+AGG + chr5_3:66031488-66031507 None:intergenic 25.0%
! ACAATGAAACTAACCTAATA+AGG + chr5_3:66031545-66031564 None:intergenic 25.0%
!!! TTGGTATGCTATTTTGTTTA+TGG - chr5_3:66031578-66031597 Msa0825920:intron 25.0%
! TGTTTATGGATCTGTTTATT+TGG - chr5_3:66031592-66031611 Msa0825920:intron 25.0%
! TATACAGAATTGAGAAATGT+TGG - chr5_3:66031679-66031698 Msa0825920:intron 25.0%
!!! GGGAATATTTTTTTGTGATA+GGG - chr5_3:66031818-66031837 Msa0825920:intron 25.0%
! GATAGGAAAAATAAAAGTTG+AGG + chr5_3:66031917-66031936 None:intergenic 25.0%
!!! CAACTTTTATTTTTCCTATC+TGG - chr5_3:66031917-66031936 Msa0825920:intron 25.0%
! AATATATACAAGTGGAAGTA+TGG - chr5_3:66031957-66031976 Msa0825920:intron 25.0%
! CTTTCTTTCAGTAATATCAA+CGG + chr5_3:66032075-66032094 None:intergenic 25.0%
!!! TGTTAATTTGTCTACATTTC+AGG - chr5_3:66032351-66032370 Msa0825920:CDS 25.0%
!! TGAATTTTTGTTGGATCAAA+AGG + chr5_3:66032445-66032464 None:intergenic 25.0%
!! CTGACAATTTGAATTTTTGT+TGG + chr5_3:66032454-66032473 None:intergenic 25.0%
! CAACAAAAATTCAAATTGTC+AGG - chr5_3:66032452-66032471 Msa0825920:CDS 25.0%
!!! TTAATTGTTTTTGCAGAGTT+TGG - chr5_3:66032647-66032666 Msa0825920:intron 25.0%
!!! GTTTTATTAGCCTAGTTTTT+AGG - chr5_3:66032947-66032966 Msa0825920:intron 25.0%
! CAATTAAAAGGAATTCAACA+AGG + chr5_3:66033081-66033100 None:intergenic 25.0%
! GGAAAGTTTCATAGTAAATT+AGG + chr5_3:66033136-66033155 None:intergenic 25.0%
! AGAATTTCACATTCTCAAAA+AGG + chr5_3:66033161-66033180 None:intergenic 25.0%
! TAGTGTTTACTATATTGTCT+TGG - chr5_3:66033198-66033217 Msa0825920:intron 25.0%
! AGTGTTTACTATATTGTCTT+GGG - chr5_3:66033199-66033218 Msa0825920:intron 25.0%
!! ACTTCAAACATTTTCATACA+CGG + chr5_3:66033238-66033257 None:intergenic 25.0%
!!! AAGTTTTTTGGCAAATCTTT+AGG - chr5_3:66033349-66033368 Msa0825920:intron 25.0%
! AGTTTGAGAAAGATATTTAC+TGG - chr5_3:66034000-66034019 Msa0825920:CDS 25.0%
! AGAAAGATATTTACTGGATT+TGG - chr5_3:66034006-66034025 Msa0825920:CDS 25.0%
! GAAAGATATTTACTGGATTT+GGG - chr5_3:66034007-66034026 Msa0825920:CDS 25.0%
!!! TTTGGGAATTGGTTTTTAAT+TGG - chr5_3:66034024-66034043 Msa0825920:exon 25.0%
! AACATATGATAGCTATAGAT+AGG + chr5_3:66034055-66034074 None:intergenic 25.0%
!!! AATGGTTTTGGTTTTGGTTT+TGG + chr5_3:66029330-66029349 None:intergenic 30.0%
! GTGATGTTGTAAAATGGTTT+TGG + chr5_3:66029342-66029361 None:intergenic 30.0%
TAACCAAAACAAACTCGATT+AGG + chr5_3:66029958-66029977 None:intergenic 30.0%
!!! TAATCGAGTTTGTTTTGGTT+AGG - chr5_3:66029957-66029976 Msa0825920:intron 30.0%
TTATCTGAACGATTCAATCT+TGG - chr5_3:66029980-66029999 Msa0825920:intron 30.0%
CGATTCAATCTCAAATTACA+AGG + chr5_3:66030098-66030117 None:intergenic 30.0%
!!! TTTGTTTTTGTTAGGTTACC+TGG - chr5_3:66030137-66030156 Msa0825920:intron 30.0%
TCCCCCTTTACTAATTAAAA+TGG - chr5_3:66030256-66030275 Msa0825920:intron 30.0%
ACTGAAGGATGTTAGATATT+TGG - chr5_3:66030579-66030598 Msa0825920:CDS 30.0%
! CTAACAATACAAACTTGTTC+AGG + chr5_3:66030673-66030692 None:intergenic 30.0%
! ATTGAAGCATCTTGAACATT+TGG - chr5_3:66030697-66030716 Msa0825920:CDS 30.0%
!! TTTGTTGTTGTTGTTGTTGT+TGG - chr5_3:66030751-66030770 Msa0825920:intron 30.0%
CATTGTGATATGTGATGAAT+TGG - chr5_3:66031559-66031578 Msa0825920:CDS 30.0%
TGAACAATCGATAATCCATT+AGG + chr5_3:66031782-66031801 None:intergenic 30.0%
! TGTTCAAGCTTTATCATTGA+TGG - chr5_3:66031796-66031815 Msa0825920:intron 30.0%
! GTTCAAGCTTTATCATTGAT+GGG - chr5_3:66031797-66031816 Msa0825920:intron 30.0%
! TTCAAGCTTTATCATTGATG+GGG - chr5_3:66031798-66031817 Msa0825920:intron 30.0%
!!! GGGGAATATTTTTTTGTGAT+AGG - chr5_3:66031817-66031836 Msa0825920:intron 30.0%
!!! TTTTTTGTGATAGGGTCATA+AGG - chr5_3:66031826-66031845 Msa0825920:intron 30.0%
GTTGCACTAATATATACAAG+TGG - chr5_3:66031949-66031968 Msa0825920:intron 30.0%
CGTTGATATTACTGAAAGAA+AGG - chr5_3:66032073-66032092 Msa0825920:CDS 30.0%
!! TTTTGGGAAGATTATTTGCT+AGG - chr5_3:66032270-66032289 Msa0825920:CDS 30.0%
! TAATTTGTCTACATTTCAGG+AGG - chr5_3:66032354-66032373 Msa0825920:CDS 30.0%
! ATAGGCTATTGAAAGGTATA+TGG - chr5_3:66032509-66032528 Msa0825920:CDS 30.0%
GAAGTTAATTGTTATCACCA+AGG + chr5_3:66032536-66032555 None:intergenic 30.0%
AAAACACCTTCAAATAACAG+TGG + chr5_3:66032576-66032595 None:intergenic 30.0%
! TGTTAATTCAGTTTTGCCTT+TGG - chr5_3:66032624-66032643 Msa0825920:CDS 30.0%
CTGCAAAAACAATTAACCAA+AGG + chr5_3:66032643-66032662 None:intergenic 30.0%
AATGAAAAGAACTGTCTTGT+TGG - chr5_3:66032912-66032931 Msa0825920:intron 30.0%
TAGTCATTTCATAGCAGATT+AGG + chr5_3:66033108-66033127 None:intergenic 30.0%
TTTCACATTCTCAAAAAGGT+TGG + chr5_3:66033157-66033176 None:intergenic 30.0%
!!! AAGTTTTGTTGCAAACCTTT+AGG - chr5_3:66033254-66033273 Msa0825920:intron 30.0%
! AGTTTTGCTCTACATAAAAG+AGG - chr5_3:66033480-66033499 Msa0825920:intron 30.0%
! TGATCTTTTAACAGGTTAAC+AGG - chr5_3:66033522-66033541 Msa0825920:intron 30.0%
! GATCTTTTAACAGGTTAACA+GGG - chr5_3:66033523-66033542 Msa0825920:intron 30.0%
!!! GGTTCGTGTTGTTTTATTTT+GGG - chr5_3:66033848-66033867 Msa0825920:CDS 30.0%
CTATTATTTGCTCAAAGACA+AGG - chr5_3:66033936-66033955 Msa0825920:CDS 30.0%
TATTTACTGGATTTGGGAAT+TGG - chr5_3:66034013-66034032 Msa0825920:CDS 30.0%
!! GGTTTTGCAATGAAGTGTTT+CGG + chr5_3:66029462-66029481 None:intergenic 35.0%
AAGAAACGTCAAGAGTTACA+TGG - chr5_3:66029677-66029696 Msa0825920:CDS 35.0%
! ATCTTTGAAAGAGAAGGATG+AGG - chr5_3:66029703-66029722 Msa0825920:CDS 35.0%
AGAAGGATGAGGTTATTGTT+AGG - chr5_3:66029714-66029733 Msa0825920:CDS 35.0%
GGTGTTCTTGATATCTTTGA+TGG - chr5_3:66029743-66029762 Msa0825920:CDS 35.0%
!! TGACCTAATCGAGTTTGTTT+TGG - chr5_3:66029952-66029971 Msa0825920:intron 35.0%
AAGTTAAGATTGAATCGTCC+AGG + chr5_3:66030158-66030177 None:intergenic 35.0%
!!! AAGTGTTTTGAGAAATGGCT+TGG - chr5_3:66030806-66030825 Msa0825920:intron 35.0%
!!! AGTGTTTTGAGAAATGGCTT+GGG - chr5_3:66030807-66030826 Msa0825920:intron 35.0%
! ACTATCCCAAAGGATCATTT+TGG - chr5_3:66031082-66031101 Msa0825920:intron 35.0%
TATTAGGATCATACTCAGCA+AGG + chr5_3:66031114-66031133 None:intergenic 35.0%
TTGCTGAGTATGATCCTAAT+AGG - chr5_3:66031113-66031132 Msa0825920:intron 35.0%
! TGGATCTGTTTATTTGGTTC+AGG - chr5_3:66031598-66031617 Msa0825920:intron 35.0%
ACAAAAATCAACCTTGTCCA+TGG + chr5_3:66031893-66031912 None:intergenic 35.0%
TTGATCTGCAGTGATTTAAC+TGG - chr5_3:66032005-66032024 Msa0825920:CDS 35.0%
AAAGAAAGGATGATCCATCA+TGG - chr5_3:66032087-66032106 Msa0825920:CDS 35.0%
AAGAAAGGATGATCCATCAT+GGG - chr5_3:66032088-66032107 Msa0825920:CDS 35.0%
AACTATGGTACAGCAAAGTT+GGG + chr5_3:66032312-66032331 None:intergenic 35.0%
AAACTATGGTACAGCAAAGT+TGG + chr5_3:66032313-66032332 None:intergenic 35.0%
! GCTGTACCATAGTTTTTGTA+AGG - chr5_3:66032318-66032337 Msa0825920:CDS 35.0%
GAGAGACCTTACAAAAACTA+TGG + chr5_3:66032327-66032346 None:intergenic 35.0%
TCTACATTTCAGGAGGAAAA+GGG - chr5_3:66032361-66032380 Msa0825920:CDS 35.0%
AAAGGATCCACAATGTTCAT+CGG + chr5_3:66032427-66032446 None:intergenic 35.0%
!! CTATCCTTGATTTTGAAGGA+CGG + chr5_3:66032493-66032512 None:intergenic 35.0%
! TAGCCTATCCTTGATTTTGA+AGG + chr5_3:66032497-66032516 None:intergenic 35.0%
ATCAAGGATAGGCTATTGAA+AGG - chr5_3:66032502-66032521 Msa0825920:CDS 35.0%
! ATTGAAAGGTATATGGTCCT+TGG - chr5_3:66032516-66032535 Msa0825920:CDS 35.0%
ATAACAGTGGTCTAAGGAAA+AGG + chr5_3:66032563-66032582 None:intergenic 35.0%
CTTCAAATAACAGTGGTCTA+AGG + chr5_3:66032569-66032588 None:intergenic 35.0%
! CTTAGACCACTGTTATTTGA+AGG - chr5_3:66032567-66032586 Msa0825920:CDS 35.0%
!! TGTCTTGTTGGACTTTTAGT+TGG - chr5_3:66032924-66032943 Msa0825920:intron 35.0%
!! GTCTTGTTGGACTTTTAGTT+GGG - chr5_3:66032925-66032944 Msa0825920:intron 35.0%
!!! TTAGCCTAGTTTTTAGGGTT+TGG - chr5_3:66032953-66032972 Msa0825920:intron 35.0%
CAAACCAAACCCTAAAAACT+AGG + chr5_3:66032960-66032979 None:intergenic 35.0%
TGAGAATGTGAAATTCTGTC+TGG - chr5_3:66033164-66033183 Msa0825920:intron 35.0%
AAGAAGAAGAAAGGTGATGA+TGG - chr5_3:66033743-66033762 Msa0825920:CDS 35.0%
!!! CGGTTCGTGTTGTTTTATTT+TGG - chr5_3:66033847-66033866 Msa0825920:CDS 35.0%
ACAGCATGAGTTAATACAAC+AGG - chr5_3:66033881-66033900 Msa0825920:CDS 35.0%
CAGCATGAGTTAATACAACA+GGG - chr5_3:66033882-66033901 Msa0825920:CDS 35.0%
! TGAAGTGTTTCGGTTTCTGA+TGG + chr5_3:66029452-66029471 None:intergenic 40.0%
!! CACTTGTTGTTGGAACAACA+GGG + chr5_3:66029514-66029533 None:intergenic 40.0%
!! TCACTTGTTGTTGGAACAAC+AGG + chr5_3:66029515-66029534 None:intergenic 40.0%
!! TCGAGCATTTCACTTGTTGT+TGG + chr5_3:66029524-66029543 None:intergenic 40.0%
CAACAAGTGAAATGCTCGAT+TGG - chr5_3:66029525-66029544 Msa0825920:three_prime_UTR 40.0%
ATTCTCAATAGCGCGAATAG+CGG + chr5_3:66029627-66029646 None:intergenic 40.0%
TGAGAATGATCCTTCGTTGA+CGG - chr5_3:66029640-66029659 Msa0825920:CDS 40.0%
AAACGTCAAGAGTTACATGG+TGG - chr5_3:66029680-66029699 Msa0825920:CDS 40.0%
! TGGTGGATCTTTGAAAGAGA+AGG - chr5_3:66029697-66029716 Msa0825920:CDS 40.0%
GAGGTTATTGTTAGGAGAAG+TGG - chr5_3:66029722-66029741 Msa0825920:CDS 40.0%
!!! GCCTGAAGTGTTTTGAGAAA+TGG - chr5_3:66030801-66030820 Msa0825920:intron 40.0%
GCCATTTCTCAAAACACTTC+AGG + chr5_3:66030805-66030824 None:intergenic 40.0%
! TGTTTTCTTTGCTCTCTCAG+TGG + chr5_3:66031026-66031045 None:intergenic 40.0%
ACTGAGAGAGCAAAGAAAAC+AGG - chr5_3:66031025-66031044 Msa0825920:CDS 40.0%
GAGAGCAAAGAAAACAGGAA+AGG - chr5_3:66031030-66031049 Msa0825920:CDS 40.0%
AATCTTCGTGACTATCCCAA+AGG - chr5_3:66031072-66031091 Msa0825920:intron 40.0%
TCGGTCCAAAATGATCCTTT+GGG + chr5_3:66031090-66031109 None:intergenic 40.0%
ATCGGTCCAAAATGATCCTT+TGG + chr5_3:66031091-66031110 None:intergenic 40.0%
TATGATCCTAATAGGAACCG+TGG - chr5_3:66031121-66031140 Msa0825920:intron 40.0%
ATGATCCTAATAGGAACCGT+GGG - chr5_3:66031122-66031141 Msa0825920:intron 40.0%
!! GGTTCTTGTTGGTGATACTT+GGG - chr5_3:66031144-66031163 Msa0825920:intron 40.0%
ATAGGATGGAATGTAGGCAA+TGG - chr5_3:66031170-66031189 Msa0825920:intron 40.0%
TAGGATGGAATGTAGGCAAT+GGG - chr5_3:66031171-66031190 Msa0825920:intron 40.0%
CAAACTTCTGGTCAAATGAC+TGG + chr5_3:66031363-66031382 None:intergenic 40.0%
GTCTCACTCAATGTACTTAC+TGG + chr5_3:66031760-66031779 None:intergenic 40.0%
GTACATTGAGTGAGACCTAA+TGG - chr5_3:66031764-66031783 Msa0825920:CDS 40.0%
TCTGCAGGTATTTGTTTGTG+AGG - chr5_3:66031849-66031868 Msa0825920:intron 40.0%
! TTTTCCTATCTGGGTGTTTG+TGG - chr5_3:66031927-66031946 Msa0825920:intron 40.0%
ACTCCTTAACAGTAGGTAGT+GGG + chr5_3:66032043-66032062 None:intergenic 40.0%
AACTCCTTAACAGTAGGTAG+TGG + chr5_3:66032044-66032063 None:intergenic 40.0%
ACCTACTGTTAAGGAGTTCA+AGG - chr5_3:66032046-66032065 Msa0825920:CDS 40.0%
CCTACTGTTAAGGAGTTCAA+GGG - chr5_3:66032047-66032066 Msa0825920:CDS 40.0%
CTTACATCAAAGTCCCATGA+TGG + chr5_3:66032104-66032123 None:intergenic 40.0%
CAGAAATGTAATACGCAGCA+CGG + chr5_3:66032185-66032204 None:intergenic 40.0%
ACTATGGTACAGCAAAGTTG+GGG + chr5_3:66032311-66032330 None:intergenic 40.0%
GTCTACATTTCAGGAGGAAA+AGG - chr5_3:66032360-66032379 Msa0825920:CDS 40.0%
!! TTCATCGGCTTCTTACTTTG+TGG + chr5_3:66032412-66032431 None:intergenic 40.0%
TAAGAAGCCGATGAACATTG+TGG - chr5_3:66032417-66032436 Msa0825920:CDS 40.0%
!! AAGGACGGCTTTATAGCTTT+TGG + chr5_3:66032478-66032497 None:intergenic 40.0%
AAAGCCGTCCTTCAAAATCA+AGG - chr5_3:66032486-66032505 Msa0825920:CDS 40.0%
CGTCCTTCAAAATCAAGGAT+AGG - chr5_3:66032491-66032510 Msa0825920:CDS 40.0%
!! GATATAGCTTTGGCCAGAAA+AGG + chr5_3:66032756-66032775 None:intergenic 40.0%
! TTTCTGGCCAAAGCTATATC+AGG - chr5_3:66032756-66032775 Msa0825920:CDS 40.0%
CCAAAGCTATATCAGGAACA+GGG - chr5_3:66032763-66032782 Msa0825920:CDS 40.0%
TGAGTATCTTCAGAATCCAC+AGG - chr5_3:66032859-66032878 Msa0825920:intron 40.0%
ACAGGTTAACAGGGAAATGA+TGG - chr5_3:66033532-66033551 Msa0825920:intron 40.0%
CAGGTTAACAGGGAAATGAT+GGG - chr5_3:66033533-66033552 Msa0825920:intron 40.0%
TGAACAACAGGAAGAACAGA+TGG - chr5_3:66033583-66033602 Msa0825920:intron 40.0%
GAGTGAAGAAAATGACAAGC+CGG - chr5_3:66033634-66033653 Msa0825920:CDS 40.0%
!!! ATCAGAGGATTTTGAGACCT+CGG + chr5_3:66033669-66033688 None:intergenic 40.0%
!!! GACTTTTTCACTCGAATCAG+AGG + chr5_3:66033684-66033703 None:intergenic 40.0%
TGATTCGAGTGAAAAAGTCG+TGG - chr5_3:66033685-66033704 Msa0825920:CDS 40.0%
TCACCTTTCTTCTTCTTCTG+TGG + chr5_3:66033740-66033759 None:intergenic 40.0%
TGTGGAGGAACAAATTGATG+AGG - chr5_3:66033781-66033800 Msa0825920:CDS 40.0%
! AAACAGTGGCTTGCAATTAG+AGG - chr5_3:66033819-66033838 Msa0825920:CDS 40.0%
TCACTTGGTTGAGCACAATC+AGG + chr5_3:66029557-66029576 None:intergenic 45.0%
CTCAGGCAACTGCATACAAA+AGG + chr5_3:66029783-66029802 None:intergenic 45.0%
CTTACAGTAACAGGTCTCTC+AGG + chr5_3:66029800-66029819 None:intergenic 45.0%
!! TTGTTGGTTCAGACTCCATG+TGG - chr5_3:66030767-66030786 Msa0825920:intron 45.0%
!! TGTTGGTTCAGACTCCATGT+GGG - chr5_3:66030768-66030787 Msa0825920:intron 45.0%
! TTTGAGAAATGGCTTGGGCA+AGG - chr5_3:66030812-66030831 Msa0825920:intron 45.0%
! AACGAACTTGCTCAAACTGC+AGG - chr5_3:66030837-66030856 Msa0825920:intron 45.0%
!! CTTGGATTAGTCGCCATCTT+CGG + chr5_3:66030875-66030894 None:intergenic 45.0%
TCCAAGAATCAACGCACAGT+TGG - chr5_3:66030889-66030908 Msa0825920:intron 45.0%
GAAAGGCTAATGCTTGCAGT+GGG - chr5_3:66031047-66031066 Msa0825920:intron 45.0%
GGATCATACTCAGCAAGGAT+CGG + chr5_3:66031109-66031128 None:intergenic 45.0%
TGATCCTAATAGGAACCGTG+GGG - chr5_3:66031123-66031142 Msa0825920:intron 45.0%
TATCACCAACAAGAACCCCA+CGG + chr5_3:66031141-66031160 None:intergenic 45.0%
!! GGGTTCTTGTTGGTGATACT+TGG - chr5_3:66031143-66031162 Msa0825920:intron 45.0%
!! TCTTGTTGGTGATACTTGGG+AGG - chr5_3:66031147-66031166 Msa0825920:intron 45.0%
! TTGGTGATACTTGGGAGGAT+AGG - chr5_3:66031152-66031171 Msa0825920:intron 45.0%
TGATACTTGGGAGGATAGGA+TGG - chr5_3:66031156-66031175 Msa0825920:intron 45.0%
AGGATGGAATGTAGGCAATG+GGG - chr5_3:66031172-66031191 Msa0825920:intron 45.0%
! ATTGCTGGTCAGAGTACCTA+CGG - chr5_3:66031220-66031239 Msa0825920:intron 45.0%
TATGTAGACGACGAGGATCA+TGG - chr5_3:66031271-66031290 Msa0825920:intron 45.0%
ATGTAGACGACGAGGATCAT+GGG - chr5_3:66031272-66031291 Msa0825920:intron 45.0%
! CACGAACAGGATAGCCTTTT+CGG + chr5_3:66031417-66031436 None:intergenic 45.0%
! GCTATCCTGTTCGTGTTGTT+AGG - chr5_3:66031422-66031441 Msa0825920:intron 45.0%
ACGAACCTAACAACACGAAC+AGG + chr5_3:66031430-66031449 None:intergenic 45.0%
! TATTTGGTTCAGGTCCCACA+AGG - chr5_3:66031608-66031627 Msa0825920:intron 45.0%
AGAGGAACGTTTCTCCTTGT+GGG + chr5_3:66031625-66031644 None:intergenic 45.0%
AAGAGGAACGTTTCTCCTTG+TGG + chr5_3:66031626-66031645 None:intergenic 45.0%
GAAACGTTCCTCTTATGCAC+CGG - chr5_3:66031632-66031651 Msa0825920:intron 45.0%
AAGCAGGAGTGAGATACGAT+GGG - chr5_3:66031655-66031674 Msa0825920:intron 45.0%
GAGAAATGTTGGCGCAAAGT+TGG - chr5_3:66031690-66031709 Msa0825920:intron 45.0%
CCCTTGAACTCCTTAACAGT+AGG + chr5_3:66032050-66032069 None:intergenic 45.0%
AATGTAATACGCAGCACGGA+AGG + chr5_3:66032181-66032200 None:intergenic 45.0%
TCGGCTTCTTACTTTGTGGT+GGG + chr5_3:66032408-66032427 None:intergenic 45.0%
! ATCGGCTTCTTACTTTGTGG+TGG + chr5_3:66032409-66032428 None:intergenic 45.0%
TGGTTGCAATATCTGTCGCA+AGG - chr5_3:66032667-66032686 Msa0825920:intron 45.0%
CAATATCTGTCGCAAGGTGT+TGG - chr5_3:66032673-66032692 Msa0825920:intron 45.0%
AGCACAAGGTGTAGTAAGAG+GGG + chr5_3:66032702-66032721 None:intergenic 45.0%
GAGCACAAGGTGTAGTAAGA+GGG + chr5_3:66032703-66032722 None:intergenic 45.0%
TGAGCACAAGGTGTAGTAAG+AGG + chr5_3:66032704-66032723 None:intergenic 45.0%
TTGCAGAAGTTGTGAGCACA+AGG + chr5_3:66032716-66032735 None:intergenic 45.0%
TGTGCTCACAACTTCTGCAA+AGG - chr5_3:66032716-66032735 Msa0825920:intron 45.0%
GCCAAAGCTATATCAGGAAC+AGG - chr5_3:66032762-66032781 Msa0825920:CDS 45.0%
CCCTGTTCCTGATATAGCTT+TGG + chr5_3:66032766-66032785 None:intergenic 45.0%
AATACGTGCAGTAGTACCTG+TGG + chr5_3:66032878-66032897 None:intergenic 45.0%
ACAACAGGAAGAACAGATGG+AGG - chr5_3:66033586-66033605 Msa0825920:intron 45.0%
GAACAGATGGAGGAGAATTC+TGG - chr5_3:66033596-66033615 Msa0825920:intron 45.0%
TTCGAGTGAAAAAGTCGTGG+AGG - chr5_3:66033688-66033707 Msa0825920:CDS 45.0%
AGTCGTGGAGGAAATTAACG+AGG - chr5_3:66033700-66033719 Msa0825920:CDS 45.0%
CCTTTCTTCTTCTTCTGTGG+AGG + chr5_3:66033737-66033756 None:intergenic 45.0%
CCTCCACAGAAGAAGAAGAA+AGG - chr5_3:66033734-66033753 Msa0825920:CDS 45.0%
!! GAAGAAAGGTGATGATGGCA+AGG - chr5_3:66033748-66033767 Msa0825920:CDS 45.0%
GAGGAACAAATTGATGAGGC+TGG - chr5_3:66033785-66033804 Msa0825920:CDS 45.0%
ACAAATTGATGAGGCTGGAG+TGG - chr5_3:66033790-66033809 Msa0825920:CDS 45.0%
TGGAGTGGAAAGCAAAACAG+TGG - chr5_3:66033805-66033824 Msa0825920:CDS 45.0%
GCTTGCAATTAGAGGTGGAT+CGG - chr5_3:66033827-66033846 Msa0825920:CDS 45.0%
!! TAAATTTAAAAAAACAAAAA+GGG + chr5_3:66029845-66029864 None:intergenic 5.0%
!!! AATTATTAAGTTTAAATTTT+GGG - chr5_3:66032254-66032273 Msa0825920:CDS 5.0%
GTTGGAACAACAGGGAGACA+TGG + chr5_3:66029506-66029525 None:intergenic 50.0%
GCAGCAGCAACAACATCACT+TGG + chr5_3:66029572-66029591 None:intergenic 50.0%
GAATGATCCTTCGTTGACGG+AGG - chr5_3:66029643-66029662 Msa0825920:CDS 50.0%
TTCTCTTCCTCCGTCAACGA+AGG + chr5_3:66029653-66029672 None:intergenic 50.0%
AGGCAGAAATTGTGCCCACA+TGG + chr5_3:66030785-66030804 None:intergenic 50.0%
GACTGCAATTCCACCGAAGA+TGG - chr5_3:66030859-66030878 Msa0825920:intron 50.0%
!! GCCAACTGTGCGTTGATTCT+TGG + chr5_3:66030893-66030912 None:intergenic 50.0%
CAGTGGTGTAGCATGTGTCA+GGG + chr5_3:66031009-66031028 None:intergenic 50.0%
TCAGTGGTGTAGCATGTGTC+AGG + chr5_3:66031010-66031029 None:intergenic 50.0%
GGAAAGGCTAATGCTTGCAG+TGG - chr5_3:66031046-66031065 Msa0825920:intron 50.0%
AGAACCCCACGGTTCCTATT+AGG + chr5_3:66031130-66031149 None:intergenic 50.0%
GGGAGGATAGGATGGAATGT+AGG - chr5_3:66031164-66031183 Msa0825920:intron 50.0%
! GCTCATTTTCCCCATGTTGC+TGG - chr5_3:66031196-66031215 Msa0825920:intron 50.0%
ACCAGCAATGCCAGCAACAT+GGG + chr5_3:66031209-66031228 None:intergenic 50.0%
! TTGCTGGTCAGAGTACCTAC+GGG - chr5_3:66031221-66031240 Msa0825920:intron 50.0%
TGTAGACGACGAGGATCATG+GGG - chr5_3:66031273-66031292 Msa0825920:intron 50.0%
TGGTTCCTTTACACCGGAAG+CGG - chr5_3:66031298-66031317 Msa0825920:intron 50.0%
TTGCGAACCAGTTGCCGAAA+AGG - chr5_3:66031400-66031419 Msa0825920:intron 50.0%
! AGGATAGCCTTTTCGGCAAC+TGG + chr5_3:66031410-66031429 None:intergenic 50.0%
TCGTATCTCACTCCTGCTTC+CGG + chr5_3:66031654-66031673 None:intergenic 50.0%
GAAGCAGGAGTGAGATACGA+TGG - chr5_3:66031654-66031673 Msa0825920:intron 50.0%
AGCAGGAGTGAGATACGATG+GGG - chr5_3:66031656-66031675 Msa0825920:intron 50.0%
GATAGGGTCATAAGGTCTGC+AGG - chr5_3:66031834-66031853 Msa0825920:intron 50.0%
ATCAACCTTGTCCATGGAGC+TGG + chr5_3:66031887-66031906 None:intergenic 50.0%
GCAACCACAAACACCCAGAT+AGG + chr5_3:66031934-66031953 None:intergenic 50.0%
!! TTAACAGTAGGTAGTGGGCG+AGG + chr5_3:66032038-66032057 None:intergenic 50.0%
TCGCCCACTACCTACTGTTA+AGG - chr5_3:66032037-66032056 Msa0825920:CDS 50.0%
TTCAGGAGGAAAAGGGCTGT+TGG - chr5_3:66032368-66032387 Msa0825920:CDS 50.0%
GGCTTCTTACTTTGTGGTGG+GGG + chr5_3:66032406-66032425 None:intergenic 50.0%
CGGCTTCTTACTTTGTGGTG+GGG + chr5_3:66032407-66032426 None:intergenic 50.0%
CAACTTCTGCAAAGGCTGCT+TGG - chr5_3:66032724-66032743 Msa0825920:intron 50.0%
TTCTGCAAAGGCTGCTTGGA+GGG - chr5_3:66032728-66032747 Msa0825920:intron 50.0%
CTCAAAGTGGACGCAGTTTG+CGG - chr5_3:66032789-66032808 Msa0825920:CDS 50.0%
GCTATGTCAGTTGCACAGGT+AGG + chr5_3:66032839-66032858 None:intergenic 50.0%
CTCAGCTATGTCAGTTGCAC+AGG + chr5_3:66032843-66032862 None:intergenic 50.0%
GATAGAATCACTCCAGCGAC+AGG - chr5_3:66033559-66033578 Msa0825920:intron 50.0%
! CAGTGGCTTGCAATTAGAGG+TGG - chr5_3:66033822-66033841 Msa0825920:CDS 50.0%
CACCTTCCTTGTGACGCTGA+CGG - chr5_3:66029401-66029420 Msa0825920:three_prime_UTR 55.0%
CATACACCGTCAGCGTCACA+AGG + chr5_3:66029410-66029429 None:intergenic 55.0%
TGACGCTGACGGTGTATGCA+TGG - chr5_3:66029412-66029431 Msa0825920:three_prime_UTR 55.0%
GCAAAACCTGCACAGCACCA+TGG - chr5_3:66029474-66029493 Msa0825920:three_prime_UTR 55.0%
!! AACATGCCATGGTGCTGTGC+AGG + chr5_3:66029483-66029502 None:intergenic 55.0%
GGGAGACATGGAACATGCCA+TGG + chr5_3:66029494-66029513 None:intergenic 55.0%
ACAAGATCCCCCGCAACAGA+CGG + chr5_3:66029602-66029621 None:intergenic 55.0%
!! GGATTAGTCGCCATCTTCGG+TGG + chr5_3:66030872-66030891 None:intergenic 55.0%
GTTGGCGATTGCGATCCGTA+TGG - chr5_3:66030907-66030926 Msa0825920:CDS 55.0%
TCCGTATGGCCAAGCTAGCT+AGG - chr5_3:66030921-66030940 Msa0825920:CDS 55.0%
! CCCTAGCTAGCTTGGCCATA+CGG + chr5_3:66030925-66030944 None:intergenic 55.0%
CCGTATGGCCAAGCTAGCTA+GGG - chr5_3:66030922-66030941 Msa0825920:CDS 55.0%
AGGAACCGTGGGGTTCTTGT+TGG - chr5_3:66031133-66031152 Msa0825920:intron 55.0%
CCAGCAATGCCAGCAACATG+GGG + chr5_3:66031208-66031227 None:intergenic 55.0%
GACCAGCAATGCCAGCAACA+TGG + chr5_3:66031210-66031229 None:intergenic 55.0%
! TGCTGGTCAGAGTACCTACG+GGG - chr5_3:66031222-66031241 Msa0825920:intron 55.0%
GGCTCAATCTGTCGCTCTCT+CGG - chr5_3:66031243-66031262 Msa0825920:intron 55.0%
GCTCAATCTGTCGCTCTCTC+GGG - chr5_3:66031244-66031263 Msa0825920:intron 55.0%
GGGTGGTTATGTAGACGACG+AGG - chr5_3:66031264-66031283 Msa0825920:intron 55.0%
GGGGAGTGGTTCCTTTACAC+CGG - chr5_3:66031292-66031311 Msa0825920:intron 55.0%
TTCCTTTACACCGGAAGCGG+TGG - chr5_3:66031301-66031320 Msa0825920:intron 55.0%
TTCCACCGCTTCCGGTGTAA+AGG + chr5_3:66031306-66031325 None:intergenic 55.0%
TTTACACCGGAAGCGGTGGA+AGG - chr5_3:66031305-66031324 Msa0825920:CDS 55.0%
TTACACCGGAAGCGGTGGAA+GGG - chr5_3:66031306-66031325 Msa0825920:CDS 55.0%
TCCTCTTATGCACCGGAAGC+AGG - chr5_3:66031639-66031658 Msa0825920:intron 55.0%
TCCTGCTTCCGGTGCATAAG+AGG + chr5_3:66031643-66031662 None:intergenic 55.0%
GTGACAATGAGCCAGCTCCA+TGG - chr5_3:66031873-66031892 Msa0825920:intron 55.0%
ATGAGCCAGCTCCATGGACA+AGG - chr5_3:66031879-66031898 Msa0825920:intron 55.0%
! AGGAAAAGGGCTGTTGGCTG+TGG - chr5_3:66032374-66032393 Msa0825920:CDS 55.0%
CTTCTGCAAAGGCTGCTTGG+AGG - chr5_3:66032727-66032746 Msa0825920:intron 55.0%
!!! TGCTTGGAGGGTGCCTTTTC+TGG - chr5_3:66032740-66032759 Msa0825920:intron 55.0%
AGGAACAGGGCGACTCAAAG+TGG - chr5_3:66032776-66032795 Msa0825920:CDS 55.0%
GAGACCTCGGTCTCTTCATC+CGG + chr5_3:66033656-66033675 None:intergenic 55.0%
!! AGGTGATGATGGCAAGGCTG+TGG - chr5_3:66033754-66033773 Msa0825920:CDS 55.0%
TGGCAAGGCTGTGGTGAATG+TGG - chr5_3:66033763-66033782 Msa0825920:CDS 55.0%
CAAGGCTGTGGTGAATGTGG+AGG - chr5_3:66033766-66033785 Msa0825920:CDS 55.0%
CGTCAGCGTCACAAGGAAGG+TGG + chr5_3:66029403-66029422 None:intergenic 60.0%
CACCGTCAGCGTCACAAGGA+AGG + chr5_3:66029406-66029425 None:intergenic 60.0%
TGCTGCTGCTCCGTCTGTTG+CGG - chr5_3:66029589-66029608 Msa0825920:CDS 60.0%
GCCAAGCTAGCTAGGGCAGA+GGG - chr5_3:66030929-66030948 Msa0825920:CDS 60.0%
ACCCTCTGCCCTAGCTAGCT+TGG + chr5_3:66030933-66030952 None:intergenic 60.0%
! CTAGCTAGGGCAGAGGGTGT+TGG - chr5_3:66030935-66030954 Msa0825920:CDS 60.0%
CCCCATGTTGCTGGCATTGC+TGG - chr5_3:66031205-66031224 Msa0825920:intron 60.0%
AGCGACAGATTGAGCCCCGT+AGG + chr5_3:66031239-66031258 None:intergenic 60.0%
CAATCTGTCGCTCTCTCGGG+TGG - chr5_3:66031247-66031266 Msa0825920:intron 60.0%
ACGACGAGGATCATGGGGAG+TGG - chr5_3:66031278-66031297 Msa0825920:intron 60.0%
GAGATCCCTTCCACCGCTTC+CGG + chr5_3:66031314-66031333 None:intergenic 60.0%
AGCGGTGGAAGGGATCTCAG+TGG - chr5_3:66031316-66031335 Msa0825920:CDS 60.0%
GCGGTGGAAGGGATCTCAGT+GGG - chr5_3:66031317-66031336 Msa0825920:CDS 60.0%
!! CAGTAGGTAGTGGGCGAGGA+CGG + chr5_3:66032034-66032053 None:intergenic 60.0%
CCTGTTGTTCAGCCTGTCGC+TGG + chr5_3:66033574-66033593 None:intergenic 60.0%
CCAGCGACAGGCTGAACAAC+AGG - chr5_3:66033571-66033590 Msa0825920:intron 60.0%
CAAGCCGGATGAAGAGACCG+AGG - chr5_3:66033649-66033668 Msa0825920:CDS 60.0%
GCTGCTGCTCCGTCTGTTGC+GGG - chr5_3:66029590-66029609 Msa0825920:CDS 65.0%
CTGCTGCTCCGTCTGTTGCG+GGG - chr5_3:66029591-66029610 Msa0825920:CDS 65.0%
TGCTGCTCCGTCTGTTGCGG+GGG - chr5_3:66029592-66029611 Msa0825920:CDS 65.0%
GGCCAAGCTAGCTAGGGCAG+AGG - chr5_3:66030928-66030947 Msa0825920:CDS 65.0%
!! GCTAGGGCAGAGGGTGTTGG+TGG - chr5_3:66030938-66030957 Msa0825920:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 66029308 66034115 66029308 ID=Msa0825920;Name=Msa0825920
chr5_3 mRNA 66029308 66034115 66029308 ID=Msa0825920-mRNA-1;Parent=Msa0825920;Name=Msa0825920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=75|0.75|0.88|0.88|1|1|9|277|708
chr5_3 exon 66029308 66029887 66029308 ID=Msa0825920-mRNA-1:exon:20729;Parent=Msa0825920-mRNA-1
chr5_3 exon 66030543 66030760 66030543 ID=Msa0825920-mRNA-1:exon:20728;Parent=Msa0825920-mRNA-1
chr5_3 exon 66030900 66031050 66030900 ID=Msa0825920-mRNA-1:exon:20727;Parent=Msa0825920-mRNA-1
chr5_3 exon 66031305 66031407 66031305 ID=Msa0825920-mRNA-1:exon:20726;Parent=Msa0825920-mRNA-1
chr5_3 exon 66031523 66031584 66031523 ID=Msa0825920-mRNA-1:exon:20725;Parent=Msa0825920-mRNA-1
chr5_3 exon 66031704 66031803 66031704 ID=Msa0825920-mRNA-1:exon:20724;Parent=Msa0825920-mRNA-1
chr5_3 exon 66031980 66032644 66031980 ID=Msa0825920-mRNA-1:exon:20723;Parent=Msa0825920-mRNA-1
chr5_3 exon 66032745 66032837 66032745 ID=Msa0825920-mRNA-1:exon:20722;Parent=Msa0825920-mRNA-1
chr5_3 exon 66033609 66034115 66033609 ID=Msa0825920-mRNA-1:exon:20721;Parent=Msa0825920-mRNA-1
chr5_3 five_prime_UTR 66034041 66034115 66034041 ID=Msa0825920-mRNA-1:five_prime_utr;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66033609 66034040 66033609 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66032745 66032837 66032745 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66031980 66032644 66031980 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66031704 66031803 66031704 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66031523 66031584 66031523 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66031305 66031407 66031305 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66030900 66031050 66030900 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66030543 66030760 66030543 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 CDS 66029585 66029887 66029585 ID=Msa0825920-mRNA-1:cds;Parent=Msa0825920-mRNA-1
chr5_3 three_prime_UTR 66029308 66029584 66029308 ID=Msa0825920-mRNA-1:three_prime_utr;Parent=Msa0825920-mRNA-1
Gene Sequence

>Msa0825920

ATGGCGAACATCACTCACCACCTTCCTTGTGACGCTGACGGTGTATGCATGGTGTGCAAACAAAAACCATCAGAAACCGAAACACTTCATTGCAAAACCTGCACAGCACCATGGCATGTTCCATGTCTCCCTGTTGTTCCAACAACAAGTGAAATGCTCGATTGGTTGTGTCCTGATTGTGCTCAACCAAGTGATGTTGTTGCTGCTGCTGCTGCTCCGTCTGTTGCGGGGGATCTTGTCTCCGCTATTCGCGCTATTGAGAATGATCCTTCGTTGACGGAGGAAGAGAAGAGAAAGAAACGTCAAGAGTTACATGGTGGATCTTTGAAAGAGAAGGATGAGGTTATTGTTAGGAGAAGTGGTGTTCTTGATATCTTTGATGGAAGTCTTAACTGTTCCTTTTGTATGCAGTTGCCTGAGAGACCTGTTACTGATGTTAGATATTTGGTTTTATTATACTTATTATTTGAAATTGAATTTGATTTTGTTGTTGCTGATGACGTTGTTGTCTTGTATCCTGAACAAACTCCATGTGGGCACAATTTCTGCCTGAAGTGTTTTGAGAAATGGCTTGGGCAAGGAAAACGAACTTGCTCAAACTGCAGGACTGCAATTCCACCGAAGATGGCGACTAATCCAAGAATCAACGCACAGTTGGCGATTGCGATCCGTATGGCCAAGCTAGCTAGGGCAGAGGGTGTTGGTGGAAGCACTGCTCCAAAAAATTATCAAGTTGTTCTCAATGATGAGCGCCCTGACACATGCTACACCACTGAGAGAGCAAAGAAAACAGGAAAGGCTAATGCTTGCAGTGGGAAAATCTTCGTGACTATCCCAAAGGATCATTTTGGACCGATCCTTGCTGAGTATGATCCTAATAGGAACCGTGGGGTTCTTGTTGGTGATACTTGGGAGGATAGGATGGAATGTAGGCAATGGGGAGCTCATTTTCCCCATGTTGCTGGCATTGCTGGTCAGAGTACCTACGGGGCTCAATCTGTCGCTCTCTCGGGTGGTTATGTAGACGACGAGGATCATGGGGAGTGGTTCCTTTACACCGGAAGCGGTGGAAGGGATCTCAGTGGGAATAAACGTACGAACAAAAACCAGTCATTTGACCAGAAGTTTGAAAATATGAATGAGGCTTTGCGAACCAGTTGCCGAAAAGGCTATCCTGTTCGTGTTGTTAGGTCCCACAAGGAGAAACGTTCCTCTTATGCACCGGAAGCAGGAGTGAGATACGATGGGGTATACAGAATTGAGAAATGTTGGCGCAAAGTTGGAATACAAGGTCATAAGGTCTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTAACTGGAGACCGTCCTCGCCCACTACCTACTGTTAAGGAGTTCAAGGGTGCCGTTGATATTACTGAAAGAAAGGATGATCCATCATGGGACTTTGATGAGGAAAAGGGCTGTTGGCTGTGGAAGAAGCCCCCACCACAAAGTAAGAAGCCGATGAACATTGTGGATCCTTTTGATCCAACAAAAATTCAAATTGTCAGGCCAAAAGCTATAAAGCCGTCCTTCAAAATCAAGGATAGGCTATTGAAAGAGTTTGGTTGCAATATCTGTCGCAAGGTGTTGGCTTCCCCTCTTACTACACCTTGTGCTCACAACTTCTGCAAAGGCTGCTTGGAGGGTGCCTTTTCTGGCCAAAGCTATATCAGGAACAGGGCGACTCAAAGTGGACGCAGTTTGCGGACGCAGAAGAACATTATGAAATGTCCTACCTGTGCAACTGACATAGCTGAGTATCTTCAGAATCCACAGGTTAACAGGGAAATGATGGGTGTGATAGAATCACTCCAGCGACAGGCTGAACAACAGGAAGAACAGATGGAGGAGAATTCTGGAGAATCAAGTGCTAAGAGTGAAGAAAATGACAAGCCGGATGAAGAGACCGAGGTCTCAAAATCCTCTGATTCGAGTGAAAAAGTCGTGGAGGAAATTAACGAGGATGATGTGAATCCTCCACAGAAGAAGAAGAAAGGTGATGATGGCAAGGCTGTGGTGAATGTGGAGGAACAAATTGATGAGGCTGGAGTGGAAAGCAAAACAGTGGCTTGCAATTAG
Protein sequence

>Msa0825920

MANITHHLPCDADGVCMVCKQKPSETETLHCKTCTAPWHVPCLPVVPTTSEMLDWLCPDCAQPSDVVAAAAAPSVAGDLVSAIRAIENDPSLTEEEKRKKRQELHGGSLKEKDEVIVRRSGVLDIFDGSLNCSFCMQLPERPVTDVRYLVLLYLLFEIEFDFVVADDVVVLYPEQTPCGHNFCLKCFEKWLGQGKRTCSNCRTAIPPKMATNPRINAQLAIAIRMAKLARAEGVGGSTAPKNYQVVLNDERPDTCYTTERAKKTGKANACSGKIFVTIPKDHFGPILAEYDPNRNRGVLVGDTWEDRMECRQWGAHFPHVAGIAGQSTYGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQKFENMNEALRTSCRKGYPVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDLTGDRPRPLPTVKEFKGAVDITERKDDPSWDFDEEKGCWLWKKPPPQSKKPMNIVDPFDPTKIQIVRPKAIKPSFKIKDRLLKEFGCNICRKVLASPLTTPCAHNFCKGCLEGAFSGQSYIRNRATQSGRSLRTQKNIMKCPTCATDIAEYLQNPQVNREMMGVIESLQRQAEQQEEQMEENSGESSAKSEENDKPDEETEVSKSSDSSEKVVEEINEDDVNPPQKKKKGDDGKAVVNVEEQIDEAGVESKTVACN*