Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123560 | XP_013468536.1 | 83.465 | 127 | 1 | 1 | 1 | 107 | 1 | 127 | 2.15e-58 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123560 | sp|Q9M2J9|BET11_ARATH | 62.698 | 126 | 23 | 2 | 2 | 107 | 1 | 122 | 2.34e-46 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123560 | A0A072VMB7 | 83.465 | 127 | 1 | 1 | 1 | 107 | 1 | 127 | 1.03e-58 | 186 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0123560 | 0.830986 | 2.155937e-55 | -8.615850e-47 |
| Msa0001710 | Msa0123560 | -0.819126 | 1.368169e-52 | -8.615850e-47 |
| Msa0006380 | Msa0123560 | 0.804450 | 2.148114e-49 | -8.615850e-47 |
| Msa0008090 | Msa0123560 | 0.807838 | 4.155916e-50 | -8.615850e-47 |
| Msa0020390 | Msa0123560 | 0.805039 | 1.618193e-49 | -8.615850e-47 |
| Msa0020410 | Msa0123560 | 0.815479 | 9.050146e-52 | -8.615850e-47 |
| Msa0026910 | Msa0123560 | 0.800507 | 1.395262e-48 | -8.615850e-47 |
| Msa0031340 | Msa0123560 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0038870 | Msa0123560 | 0.807073 | 6.040996e-50 | -8.615850e-47 |
| Msa0043980 | Msa0123560 | 0.853136 | 2.916853e-61 | -8.615850e-47 |
| Msa0044000 | Msa0123560 | 0.801805 | 7.570553e-49 | -8.615850e-47 |
| Msa0046740 | Msa0123560 | 0.813874 | 2.052470e-51 | -8.615850e-47 |
| Msa0064350 | Msa0123560 | 0.830235 | 3.291562e-55 | -8.615850e-47 |
| Msa0064380 | Msa0123560 | 0.821753 | 3.414767e-53 | -8.615850e-47 |
| Msa0065930 | Msa0123560 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0072420 | Msa0123560 | 0.840708 | 7.390799e-58 | -8.615850e-47 |
| Msa0074700 | Msa0123560 | 0.802154 | 6.417313e-49 | -8.615850e-47 |
| Msa0079070 | Msa0123560 | 0.831122 | 1.996362e-55 | -8.615850e-47 |
| Msa0083280 | Msa0123560 | 0.854390 | 1.270502e-61 | -8.615850e-47 |
| Msa0084080 | Msa0123560 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0086130 | Msa0123560 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0086420 | Msa0123560 | 0.822187 | 2.708401e-53 | -8.615850e-47 |
| Msa0090360 | Msa0123560 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
| Msa0090520 | Msa0123560 | 0.810210 | 1.291101e-50 | -8.615850e-47 |
| Msa0090550 | Msa0123560 | 0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0091610 | Msa0123560 | 0.852237 | 5.267412e-61 | -8.615850e-47 |
| Msa0101500 | Msa0123560 | -0.809245 | 2.081238e-50 | -8.615850e-47 |
| Msa0114060 | Msa0123560 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0115790 | Msa0123560 | 0.810235 | 1.274904e-50 | -8.615850e-47 |
| Msa0115990 | Msa0123560 | 0.837943 | 3.856352e-57 | -8.615850e-47 |
| Msa0123560 | Msa0126920 | -0.828015 | 1.136998e-54 | -8.615850e-47 |
| Msa0123560 | Msa0127650 | 0.846908 | 1.616018e-59 | -8.615850e-47 |
| Msa0123560 | Msa0127800 | 0.813091 | 3.050157e-51 | -8.615850e-47 |
| Msa0123560 | Msa0137840 | 0.802677 | 5.008050e-49 | -8.615850e-47 |
| Msa0123560 | Msa0137990 | 0.810986 | 8.776073e-51 | -8.615850e-47 |
| Msa0123560 | Msa0139320 | 0.818134 | 2.296232e-52 | -8.615850e-47 |
| Msa0123560 | Msa0140110 | 0.816398 | 5.646255e-52 | -8.615850e-47 |
| Msa0123560 | Msa0140650 | 0.828037 | 1.122970e-54 | -8.615850e-47 |
| Msa0123560 | Msa0148080 | 0.806294 | 8.820188e-50 | -8.615850e-47 |
| Msa0123560 | Msa0151180 | 0.801527 | 8.632388e-49 | -8.615850e-47 |
| Msa0123560 | Msa0167980 | 0.873495 | 1.406718e-67 | -8.615850e-47 |
| Msa0123560 | Msa0170570 | 0.802885 | 4.537491e-49 | -8.615850e-47 |
| Msa0123560 | Msa0171290 | 0.820691 | 5.999915e-53 | -8.615850e-47 |
| Msa0123560 | Msa0175540 | 0.809374 | 1.953063e-50 | -8.615850e-47 |
| Msa0123560 | Msa0183050 | 0.819060 | 1.415926e-52 | -8.615850e-47 |
| Msa0123560 | Msa0183900 | 0.813489 | 2.493954e-51 | -8.615850e-47 |
| Msa0123560 | Msa0184040 | 0.813143 | 2.971062e-51 | -8.615850e-47 |
| Msa0123560 | Msa0191050 | 0.824005 | 1.020345e-53 | -8.615850e-47 |
| Msa0123560 | Msa0191070 | 0.800562 | 1.359441e-48 | -8.615850e-47 |
| Msa0123560 | Msa0191940 | 0.817134 | 3.859280e-52 | -8.615850e-47 |
| Msa0123560 | Msa0194950 | -0.891809 | 2.829776e-74 | -8.615850e-47 |
| Msa0123560 | Msa0195630 | 0.818319 | 2.086140e-52 | -8.615850e-47 |
| Msa0123560 | Msa0204960 | 0.821423 | 4.070171e-53 | -8.615850e-47 |
| Msa0123560 | Msa0209350 | 0.812073 | 5.093946e-51 | -8.615850e-47 |
| Msa0123560 | Msa0211150 | 0.820291 | 7.413684e-53 | -8.615850e-47 |
| Msa0123560 | Msa0217670 | 0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0123560 | Msa0217680 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa0123560 | Msa0230610 | 0.812770 | 3.586073e-51 | -8.615850e-47 |
| Msa0123560 | Msa0233350 | 0.824903 | 6.272735e-54 | -8.615850e-47 |
| Msa0123560 | Msa0234050 | 0.820573 | 6.387630e-53 | -8.615850e-47 |
| Msa0123560 | Msa0236960 | -0.845563 | 3.756765e-59 | -8.615850e-47 |
| Msa0123560 | Msa0237410 | 0.819642 | 1.043375e-52 | -8.615850e-47 |
| Msa0123560 | Msa0240920 | 0.800929 | 1.144511e-48 | -8.615850e-47 |
| Msa0123560 | Msa0249860 | 0.850325 | 1.826823e-60 | -8.615850e-47 |
| Msa0123560 | Msa0257490 | 0.835283 | 1.836134e-56 | -8.615850e-47 |
| Msa0123560 | Msa0272300 | 0.872889 | 2.247020e-67 | -8.615850e-47 |
| Msa0123560 | Msa0281530 | 0.813752 | 2.183690e-51 | -8.615850e-47 |
| Msa0123560 | Msa0287410 | 0.832130 | 1.126430e-55 | -8.615850e-47 |
| Msa0123560 | Msa0287650 | 0.810945 | 8.955319e-51 | -8.615850e-47 |
| Msa0123560 | Msa0291500 | 0.851590 | 8.037162e-61 | -8.615850e-47 |
| Msa0123560 | Msa0296790 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0123560 | Msa0302160 | 0.800964 | 1.125548e-48 | -8.615850e-47 |
| Msa0123560 | Msa0305410 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0123560 | Msa0308270 | 0.827260 | 1.725513e-54 | -8.615850e-47 |
| Msa0123560 | Msa0311700 | 0.814469 | 1.516183e-51 | -8.615850e-47 |
| Msa0123560 | Msa0314720 | 0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0123560 | Msa0315440 | -0.892416 | 1.619959e-74 | -8.615850e-47 |
| Msa0123560 | Msa0326480 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0123560 | Msa0329350 | 0.827559 | 1.463608e-54 | -8.615850e-47 |
| Msa0123560 | Msa0339490 | 0.800333 | 1.513764e-48 | -8.615850e-47 |
| Msa0123560 | Msa0346430 | 0.850878 | 1.277262e-60 | -8.615850e-47 |
| Msa0123560 | Msa0369950 | 0.807532 | 4.826891e-50 | -8.615850e-47 |
| Msa0123560 | Msa0376310 | 0.815298 | 9.931011e-52 | -8.615850e-47 |
| Msa0123560 | Msa0376910 | 0.809993 | 1.437483e-50 | -8.615850e-47 |
| Msa0123560 | Msa0380300 | 0.821579 | 3.745793e-53 | -8.615850e-47 |
| Msa0123560 | Msa0385500 | 0.830743 | 2.473108e-55 | -8.615850e-47 |
| Msa0123560 | Msa0391690 | 0.843410 | 1.425119e-58 | -8.615850e-47 |
| Msa0123560 | Msa0398670 | 0.834385 | 3.090129e-56 | -8.615850e-47 |
| Msa0123560 | Msa0415430 | 0.812248 | 4.665174e-51 | -8.615850e-47 |
| Msa0123560 | Msa0429030 | 0.859834 | 3.144251e-63 | -8.615850e-47 |
| Msa0123560 | Msa0433360 | 0.822652 | 2.112316e-53 | -8.615850e-47 |
| Msa0123560 | Msa0442610 | 0.820977 | 5.156917e-53 | -8.615850e-47 |
| Msa0123560 | Msa0453350 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
| Msa0123560 | Msa0469990 | 0.814428 | 1.548614e-51 | -8.615850e-47 |
| Msa0123560 | Msa0471440 | 0.807122 | 5.898153e-50 | -8.615850e-47 |
| Msa0123560 | Msa0477080 | 0.847774 | 9.344609e-60 | -8.615850e-47 |
| Msa0123560 | Msa0479170 | 0.808369 | 3.204483e-50 | -8.615850e-47 |
| Msa0123560 | Msa0479270 | 0.847028 | 1.498603e-59 | -8.615850e-47 |
| Msa0123560 | Msa0484720 | 0.817831 | 2.689085e-52 | -8.615850e-47 |
| Msa0123560 | Msa0484740 | 0.843659 | 1.223351e-58 | -8.615850e-47 |
| Msa0123560 | Msa0493630 | 0.824202 | 9.169066e-54 | -8.615850e-47 |
| Msa0123560 | Msa0512340 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0123560 | Msa0521050 | 0.820286 | 7.432911e-53 | -8.615850e-47 |
| Msa0123560 | Msa0521430 | 0.813547 | 2.421564e-51 | -8.615850e-47 |
| Msa0123560 | Msa0524500 | 0.820100 | 8.196529e-53 | -8.615850e-47 |
| Msa0123560 | Msa0527540 | 0.818315 | 2.090534e-52 | -8.615850e-47 |
| Msa0123560 | Msa0531530 | 0.824754 | 6.799990e-54 | -8.615850e-47 |
| Msa0123560 | Msa0531690 | 0.827753 | 1.314516e-54 | -8.615850e-47 |
| Msa0123560 | Msa0542260 | 0.806097 | 9.704533e-50 | -8.615850e-47 |
| Msa0123560 | Msa0542290 | 0.840814 | 6.932010e-58 | -8.615850e-47 |
| Msa0123560 | Msa0547160 | 0.839783 | 1.288641e-57 | -8.615850e-47 |
| Msa0123560 | Msa0548240 | 0.849520 | 3.067612e-60 | -8.615850e-47 |
| Msa0123560 | Msa0549450 | 0.810884 | 9.232920e-51 | -8.615850e-47 |
| Msa0123560 | Msa0552810 | 0.802706 | 4.939000e-49 | -8.615850e-47 |
| Msa0123560 | Msa0556060 | 0.839662 | 1.385469e-57 | -8.615850e-47 |
| Msa0123560 | Msa0566310 | 0.812667 | 3.777652e-51 | -8.615850e-47 |
| Msa0123560 | Msa0572840 | 0.801231 | 9.927010e-49 | -8.615850e-47 |
| Msa0123560 | Msa0580280 | 0.838667 | 2.509204e-57 | -8.615850e-47 |
| Msa0123560 | Msa0587910 | 0.822243 | 2.629743e-53 | -8.615850e-47 |
| Msa0123560 | Msa0604290 | 0.808128 | 3.606004e-50 | -8.615850e-47 |
| Msa0123560 | Msa0607050 | 0.810599 | 1.063911e-50 | -8.615850e-47 |
| Msa0123560 | Msa0608160 | 0.802554 | 5.310280e-49 | -8.615850e-47 |
| Msa0123560 | Msa0609410 | -0.816244 | 6.111251e-52 | -8.615850e-47 |
| Msa0123560 | Msa0613920 | 0.832249 | 1.053019e-55 | -8.615850e-47 |
| Msa0123560 | Msa0620230 | 0.818490 | 1.908076e-52 | -8.615850e-47 |
| Msa0123560 | Msa0648080 | 0.811274 | 7.599226e-51 | -8.615850e-47 |
| Msa0123560 | Msa0651050 | 0.828762 | 7.508337e-55 | -8.615850e-47 |
| Msa0123560 | Msa0657580 | 0.803424 | 3.508748e-49 | -8.615850e-47 |
| Msa0123560 | Msa0665860 | 0.819504 | 1.122109e-52 | -8.615850e-47 |
| Msa0123560 | Msa0666270 | 0.832732 | 7.994061e-56 | -8.615850e-47 |
| Msa0123560 | Msa0682680 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
| Msa0123560 | Msa0687020 | 0.826984 | 2.009020e-54 | -8.615850e-47 |
| Msa0123560 | Msa0687030 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0123560 | Msa0689500 | 0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa0123560 | Msa0690150 | 0.807104 | 5.950636e-50 | -8.615850e-47 |
| Msa0123560 | Msa0692840 | 0.811772 | 5.924064e-51 | -8.615850e-47 |
| Msa0123560 | Msa0692940 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0123560 | Msa0692980 | 0.801696 | 7.971483e-49 | -8.615850e-47 |
| Msa0123560 | Msa0696450 | 0.810986 | 8.772105e-51 | -8.615850e-47 |
| Msa0123560 | Msa0697940 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0123560 | Msa0698540 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
| Msa0123560 | Msa0702830 | 0.828056 | 1.111101e-54 | -8.615850e-47 |
| Msa0123560 | Msa0708000 | -0.801837 | 7.457361e-49 | -8.615850e-47 |
| Msa0123560 | Msa0709400 | 0.855770 | 5.049266e-62 | -8.615850e-47 |
| Msa0123560 | Msa0711100 | 0.800125 | 1.669051e-48 | -8.615850e-47 |
| Msa0123560 | Msa0713820 | 0.821832 | 3.273425e-53 | -8.615850e-47 |
| Msa0123560 | Msa0716690 | 0.801916 | 7.184829e-49 | -8.615850e-47 |
| Msa0123560 | Msa0718750 | 0.809015 | 2.331838e-50 | -8.615850e-47 |
| Msa0123560 | Msa0732880 | 0.806774 | 6.987991e-50 | -8.615850e-47 |
| Msa0123560 | Msa0737600 | 0.820719 | 5.912586e-53 | -8.615850e-47 |
| Msa0123560 | Msa0740510 | 0.847212 | 1.333742e-59 | -8.615850e-47 |
| Msa0123560 | Msa0747060 | 0.834970 | 2.202976e-56 | -8.615850e-47 |
| Msa0123560 | Msa0750170 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa0123560 | Msa0752700 | 0.809511 | 1.825183e-50 | -8.615850e-47 |
| Msa0123560 | Msa0756060 | 0.821993 | 3.003819e-53 | -8.615850e-47 |
| Msa0123560 | Msa0763070 | 0.802585 | 5.232532e-49 | -8.615850e-47 |
| Msa0123560 | Msa0772410 | 0.804328 | 2.277596e-49 | -8.615850e-47 |
| Msa0123560 | Msa0790890 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0123560 | Msa0794730 | 0.801977 | 6.980180e-49 | -8.615850e-47 |
| Msa0123560 | Msa0794970 | 0.826801 | 2.222678e-54 | -8.615850e-47 |
| Msa0123560 | Msa0806790 | 0.815333 | 9.753342e-52 | -8.615850e-47 |
| Msa0123560 | Msa0806800 | 0.818430 | 1.967937e-52 | -8.615850e-47 |
| Msa0123560 | Msa0820770 | 0.851273 | 9.882385e-61 | -8.615850e-47 |
| Msa0123560 | Msa0827280 | 0.804688 | 1.915331e-49 | -8.615850e-47 |
| Msa0123560 | Msa0831100 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0123560 | Msa0832150 | 0.818630 | 1.773560e-52 | -8.615850e-47 |
| Msa0123560 | Msa0832340 | 0.823911 | 1.073528e-53 | -8.615850e-47 |
| Msa0123560 | Msa0847770 | 0.809889 | 1.513387e-50 | -8.615850e-47 |
| Msa0123560 | Msa0861090 | 0.848525 | 5.799851e-60 | -8.615850e-47 |
| Msa0123560 | Msa0866950 | 0.822607 | 2.164237e-53 | -8.615850e-47 |
| Msa0123560 | Msa0880450 | 0.816768 | 4.664475e-52 | -8.615850e-47 |
| Msa0123560 | Msa0880470 | 0.809225 | 2.102567e-50 | -8.615850e-47 |
| Msa0123560 | Msa0881460 | 0.803045 | 4.204423e-49 | -8.615850e-47 |
| Msa0123560 | Msa0924470 | 0.817497 | 3.198601e-52 | -8.615850e-47 |
| Msa0123560 | Msa0933310 | 0.801664 | 8.090939e-49 | -8.615850e-47 |
| Msa0123560 | Msa0934850 | 0.811138 | 8.134027e-51 | -8.615850e-47 |
| Msa0123560 | Msa0963270 | 0.849767 | 2.617020e-60 | -8.615850e-47 |
| Msa0123560 | Msa0971090 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
| Msa0123560 | Msa0980880 | 0.804960 | 1.680955e-49 | -8.615850e-47 |
| Msa0123560 | Msa0997970 | 0.823419 | 1.399531e-53 | -8.615850e-47 |
| Msa0123560 | Msa1012320 | 0.801138 | 1.037093e-48 | -8.615850e-47 |
| Msa0123560 | Msa1023920 | 0.838467 | 2.826431e-57 | -8.615850e-47 |
| Msa0123560 | Msa1031660 | 0.809678 | 1.680049e-50 | -8.615850e-47 |
| Msa0123560 | Msa1034150 | 0.829685 | 4.483030e-55 | -8.615850e-47 |
| Msa0123560 | Msa1036300 | 0.822128 | 2.795378e-53 | -8.615850e-47 |
| Msa0123560 | Msa1041850 | 0.811449 | 6.961746e-51 | -8.615850e-47 |
| Msa0123560 | Msa1043050 | 0.803322 | 3.684414e-49 | -8.615850e-47 |
| Msa0123560 | Msa1046280 | 0.823634 | 1.246010e-53 | -8.615850e-47 |
| Msa0123560 | Msa1058750 | 0.818725 | 1.687214e-52 | -8.615850e-47 |
| Msa0123560 | Msa1062920 | 0.825467 | 4.614011e-54 | -8.615850e-47 |
| Msa0123560 | Msa1070720 | 0.802769 | 4.793946e-49 | -8.615850e-47 |
| Msa0123560 | Msa1078170 | 0.827379 | 1.616318e-54 | -8.615850e-47 |
| Msa0123560 | Msa1078270 | 0.804556 | 2.040977e-49 | -8.615850e-47 |
| Msa0123560 | Msa1084430 | 0.804356 | 2.246624e-49 | -8.615850e-47 |
| Msa0123560 | Msa1087850 | 0.822441 | 2.365635e-53 | -8.615850e-47 |
| Msa0123560 | Msa1089320 | 0.810757 | 9.837055e-51 | -8.615850e-47 |
| Msa0123560 | Msa1107900 | 0.841155 | 5.641108e-58 | -8.615850e-47 |
| Msa0123560 | Msa1109680 | 0.806286 | 8.856466e-50 | -8.615850e-47 |
| Msa0123560 | Msa1114410 | 0.812448 | 4.218303e-51 | -8.615850e-47 |
| Msa0123560 | Msa1117240 | 0.813864 | 2.062991e-51 | -8.615850e-47 |
| Msa0123560 | Msa1124960 | 0.835258 | 1.863221e-56 | -8.615850e-47 |
| Msa0123560 | Msa1130980 | 0.843168 | 1.653691e-58 | -8.615850e-47 |
| Msa0123560 | Msa1150710 | 0.814418 | 1.556578e-51 | -8.615850e-47 |
| Msa0123560 | Msa1159840 | 0.822724 | 2.032614e-53 | -8.615850e-47 |
| Msa0123560 | Msa1165230 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
| Msa0123560 | Msa1167340 | 0.843795 | 1.125006e-58 | -8.615850e-47 |
| Msa0123560 | Msa1169770 | 0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa0123560 | Msa1190930 | 0.832085 | 1.155883e-55 | -8.615850e-47 |
| Msa0123560 | Msa1199990 | 0.829426 | 5.183012e-55 | -8.615850e-47 |
| Msa0123560 | Msa1204530 | 0.837632 | 4.635204e-57 | -8.615850e-47 |
| Msa0123560 | Msa1204630 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
| Msa0123560 | Msa1239910 | 0.838822 | 2.288185e-57 | -8.615850e-47 |
| Msa0123560 | Msa1244600 | 0.867177 | 1.658959e-65 | -8.615850e-47 |
| Msa0123560 | Msa1244610 | 0.816752 | 4.704082e-52 | -8.615850e-47 |
| Msa0123560 | Msa1244720 | -0.810058 | 1.392359e-50 | -8.615850e-47 |
| Msa0123560 | Msa1250530 | 0.825478 | 4.585579e-54 | -8.615850e-47 |
| Msa0123560 | Msa1251160 | 0.800973 | 1.120666e-48 | -8.615850e-47 |
| Msa0123560 | Msa1253020 | 0.826267 | 2.979469e-54 | -8.615850e-47 |
| Msa0123560 | Msa1254730 | 0.832270 | 1.040580e-55 | -8.615850e-47 |
| Msa0123560 | Msa1256470 | 0.829745 | 4.333691e-55 | -8.615850e-47 |
| Msa0123560 | Msa1267430 | 0.813318 | 2.719437e-51 | -8.615850e-47 |
| Msa0123560 | Msa1279400 | 0.846202 | 2.518114e-59 | -8.615850e-47 |
| Msa0123560 | Msa1284550 | 0.800360 | 1.494715e-48 | -8.615850e-47 |
| Msa0123560 | Msa1293510 | 0.812322 | 4.494990e-51 | -8.615850e-47 |
| Msa0123560 | Msa1294820 | 0.820510 | 6.604634e-53 | -8.615850e-47 |
| Msa0123560 | Msa1304820 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0123560 | Msa1305340 | 0.804627 | 1.973000e-49 | -8.615850e-47 |
| Msa0123560 | Msa1305660 | 0.836695 | 8.048212e-57 | -8.615850e-47 |
| Msa0123560 | Msa1305700 | 0.825365 | 4.877861e-54 | -8.615850e-47 |
| Msa0123560 | Msa1305710 | 0.819359 | 1.210280e-52 | -8.615850e-47 |
| Msa0123560 | Msa1305810 | 0.827510 | 1.503604e-54 | -8.615850e-47 |
| Msa0123560 | Msa1331000 | 0.801510 | 8.704904e-49 | -8.615850e-47 |
| Msa0123560 | Msa1331320 | 0.816690 | 4.856382e-52 | -8.615850e-47 |
| Msa0123560 | Msa1341950 | 0.837439 | 5.193644e-57 | -8.615850e-47 |
| Msa0123560 | Msa1342890 | 0.817496 | 3.200074e-52 | -8.615850e-47 |
| Msa0123560 | Msa1346730 | 0.847467 | 1.135524e-59 | -8.615850e-47 |
| Msa0123560 | Msa1353980 | 0.828453 | 8.914688e-55 | -8.615850e-47 |
| Msa0123560 | Msa1356140 | 0.827506 | 1.507053e-54 | -8.615850e-47 |
| Msa0123560 | Msa1357620 | 0.830752 | 2.460837e-55 | -8.615850e-47 |
| Msa0123560 | Msa1362420 | 0.843389 | 1.443999e-58 | -8.615850e-47 |
| Msa0123560 | Msa1364210 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
| Msa0123560 | Msa1367590 | 0.820158 | 7.949933e-53 | -8.615850e-47 |
| Msa0123560 | Msa1374470 | 0.805011 | 1.640130e-49 | -8.615850e-47 |
| Msa0123560 | Msa1376650 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0123560 | Msa1382540 | 0.812051 | 5.148988e-51 | -8.615850e-47 |
| Msa0123560 | Msa1385770 | 0.808288 | 3.333842e-50 | -8.615850e-47 |
| Msa0123560 | Msa1397120 | 0.800857 | 1.184026e-48 | -8.615850e-47 |
| Msa0123560 | Msa1400870 | -0.809163 | 2.167043e-50 | -8.615850e-47 |
| Msa0123560 | Msa1403890 | 0.800896 | 1.162224e-48 | -8.615850e-47 |
| Msa0123560 | Msa1404300 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0123560 | Msa1409240 | 0.809937 | 1.478383e-50 | -8.615850e-47 |
| Msa0123560 | Msa1411020 | 0.803178 | 3.945403e-49 | -8.615850e-47 |
| Msa0123560 | Msa1418340 | 0.841284 | 5.215009e-58 | -8.615850e-47 |
| Msa0123560 | Msa1420490 | 0.813699 | 2.243046e-51 | -8.615850e-47 |
| Msa0123560 | Msa1422580 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0123560 | Msa1423390 | 0.815458 | 9.149977e-52 | -8.615850e-47 |
| Msa0123560 | Msa1424290 | 0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0123560 | Msa1424450 | 0.808430 | 3.109394e-50 | -8.615850e-47 |
| Msa0123560 | Msa1433390 | 0.819356 | 1.212417e-52 | -8.615850e-47 |
| Msa0123560 | Msa1434350 | 0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0123560 | Msa1434420 | -0.887091 | 1.934466e-72 | -8.615850e-47 |
| Msa0123560 | Msa1439320 | 0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0123560 | Msa1440370 | 0.811479 | 6.857284e-51 | -8.615850e-47 |
| Msa0123560 | Msa1440810 | 0.809690 | 1.670650e-50 | -8.615850e-47 |
| Msa0123560 | Msa1443780 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0123560 | Msa1444740 | 0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0123560 | Msa1449520 | 0.801273 | 9.733324e-49 | -8.615850e-47 |
| Msa0123560 | Msa1451160 | 0.827494 | 1.517012e-54 | -8.615850e-47 |
| Msa0123560 | Msa1451550 | 0.821666 | 3.576750e-53 | -8.615850e-47 |
| Msa0123560 | Msa1451560 | 0.849737 | 2.668195e-60 | -8.615850e-47 |
| Msa0123560 | Msa1452240 | 0.805019 | 1.633973e-49 | -8.615850e-47 |
| Msa0123560 | Msa1457620 | 0.843655 | 1.226201e-58 | -8.615850e-47 |
| Msa0123560 | Msa1458290 | 0.817833 | 2.685566e-52 | -8.615850e-47 |
| Msa0123560 | Msa1458610 | 0.800896 | 1.162275e-48 | -8.615850e-47 |
| Msa0123560 | Msa1461280 | 0.828947 | 6.773091e-55 | -8.615850e-47 |
| Msa0123560 | Msa1462290 | 0.855906 | 4.607619e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123560 | MtrunA17_Chr1g0184301 | 83.465 | 127 | 1 | 1 | 1 | 107 | 1 | 127 | 1.98e-62 | 186 |
| Msa0123560 | MtrunA17_Chr1g0168091 | 50.000 | 112 | 32 | 2 | 16 | 107 | 18 | 125 | 6.15e-29 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123560 | AT3G58170.1 | 62.698 | 126 | 23 | 2 | 2 | 107 | 1 | 122 | 2.38e-47 | 148 |
| Msa0123560 | AT4G14455.1 | 47.287 | 129 | 39 | 3 | 2 | 107 | 1 | 123 | 5.22e-32 | 109 |
Find 37 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGCAACTCTGTTGTTTC+GGG | 0.248402 | 1_3:-50749112 | None:intergenic |
| GCATGCTTCATCCTTTAGTT+TGG | 0.298675 | 1_3:+50750995 | Msa0123560:three_prime_UTR |
| AAAGAGCAACTCTGTTGTTT+CGG | 0.302142 | 1_3:-50749113 | None:intergenic |
| CAATGGATGGATTGCAAGAT+AGG | 0.310657 | 1_3:+50749226 | Msa0123560:CDS |
| TATCATGCTCATCAATTTCA+TGG | 0.334184 | 1_3:-50749194 | None:intergenic |
| AAAGGATGAAGCATGCATAA+AGG | 0.386040 | 1_3:-50750988 | None:intergenic |
| TTACTTATGCACAGAACAAC+AGG | 0.419198 | 1_3:+50748320 | Msa0123560:five_prime_UTR |
| AAGGATGAAGCATGCATAAA+GGG | 0.435581 | 1_3:-50750987 | None:intergenic |
| TAACCGCATGCTGGATCATA+TGG | 0.436740 | 1_3:+50750212 | Msa0123560:CDS |
| GATCGAGTGAATCCGTGATC+TGG | 0.450210 | 1_3:+50748452 | Msa0123560:five_prime_UTR |
| GAGATATGATGAATTCTAGA+AGG | 0.474589 | 1_3:+50748485 | Msa0123560:exon |
| CAGTGAGAACATTCTTCGGC+TGG | 0.475781 | 1_3:-50750773 | None:intergenic |
| AGTTAAGGAGAGATAGAAAG+AGG | 0.475864 | 1_3:-50748286 | None:intergenic |
| GTTGTTCTGTGCATAAGTAA+AGG | 0.476689 | 1_3:-50748317 | None:intergenic |
| ATGAAAGCTTTCCAAACTAA+AGG | 0.481731 | 1_3:-50751006 | None:intergenic |
| TTATCATTTACTATCTAACT+AGG | 0.482678 | 1_3:+50750821 | Msa0123560:CDS |
| CTACCAGTGAGAACATTCTT+CGG | 0.486049 | 1_3:-50750777 | None:intergenic |
| GTCTGTTTGCAACAGCTGTC+AGG | 0.490064 | 1_3:+50750162 | Msa0123560:intron |
| ATCTTTATACAGACACATAA+CGG | 0.530566 | 1_3:-50750937 | None:intergenic |
| GGATAATCATAACCGCATGC+TGG | 0.533691 | 1_3:+50750203 | Msa0123560:CDS |
| TTTGATGGTATTGAGGAGGG+TGG | 0.537955 | 1_3:+50749135 | Msa0123560:CDS |
| GATAATGAACAAGCAATGGA+TGG | 0.545746 | 1_3:+50749213 | Msa0123560:CDS |
| CAATGAATGATAAGAACACT+TGG | 0.549968 | 1_3:+50751063 | Msa0123560:three_prime_UTR |
| ATCATGCTCATCAATTTCAT+GGG | 0.551837 | 1_3:-50749193 | None:intergenic |
| TTGATGTTGAATCTGAAAGA+AGG | 0.558532 | 1_3:+50750867 | Msa0123560:three_prime_UTR |
| AGGTGATATACATGAGGAGG+TGG | 0.560404 | 1_3:+50750182 | Msa0123560:CDS |
| AATGGATGGATTGCAAGATA+GGG | 0.574154 | 1_3:+50749227 | Msa0123560:CDS |
| CAGCCGAAGAATGTTCTCAC+TGG | 0.576953 | 1_3:+50750774 | Msa0123560:CDS |
| CGAGTGAATCCGTGATCTGG+TGG | 0.588577 | 1_3:+50748455 | Msa0123560:five_prime_UTR |
| AATCCGTGATCTGGTGGTGG+TGG | 0.598793 | 1_3:+50748461 | Msa0123560:five_prime_UTR |
| GCATGATAATGAACAAGCAA+TGG | 0.600126 | 1_3:+50749209 | Msa0123560:CDS |
| GTGAATCCGTGATCTGGTGG+TGG | 0.622641 | 1_3:+50748458 | Msa0123560:five_prime_UTR |
| TCACCACCACCACCAGATCA+CGG | 0.632812 | 1_3:-50748464 | None:intergenic |
| AATTTCATGGGAAGAAGCTG+AGG | 0.635387 | 1_3:-50749181 | None:intergenic |
| GTCAGGTGATATACATGAGG+AGG | 0.657694 | 1_3:+50750179 | Msa0123560:CDS |
| GCTGTCAGGTGATATACATG+AGG | 0.690650 | 1_3:+50750176 | Msa0123560:intron |
| ACACCATATGATCCAGCATG+CGG | 0.718029 | 1_3:-50750215 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATCAATTAATTAATCT+TGG | - | chr1_3:50748517-50748536 | None:intergenic | 10.0% |
| !!! | TCTGAAATAGAAAATAATTA+TGG | - | chr1_3:50749088-50749107 | None:intergenic | 15.0% |
| !! | CTGTAATTATAATATCTATT+TGG | + | chr1_3:50749988-50750007 | Msa0123560:intron | 15.0% |
| !!! | AATATTTAATTTTCTGTGTA+TGG | + | chr1_3:50750723-50750742 | Msa0123560:intron | 15.0% |
| !!! | GTTGTTATTCAATTTGATTA+TGG | + | chr1_3:50748596-50748615 | Msa0123560:intron | 20.0% |
| !! | TCAAAATTATTCTTACTCTT+TGG | - | chr1_3:50748807-50748826 | None:intergenic | 20.0% |
| !! | CAACTTGTATTTAAATACTA+TGG | + | chr1_3:50749028-50749047 | Msa0123560:intron | 20.0% |
| !! | GAAACAATATCATATAAACA+AGG | - | chr1_3:50749421-50749440 | None:intergenic | 20.0% |
| !!! | TTATATGATATTGTTTCTGT+TGG | + | chr1_3:50749424-50749443 | Msa0123560:intron | 20.0% |
| !!! | TATATGATATTGTTTCTGTT+GGG | + | chr1_3:50749425-50749444 | Msa0123560:intron | 20.0% |
| !!! | AGTGTTTTATTGAATGTAAA+TGG | - | chr1_3:50749835-50749854 | None:intergenic | 20.0% |
| !! | ATGAATAATTCTGATAAACA+TGG | - | chr1_3:50749922-50749941 | None:intergenic | 20.0% |
| !! | ATTAAATATTTGATCCTAAG+AGG | - | chr1_3:50750713-50750732 | None:intergenic | 20.0% |
| !! | TTATCATTTACTATCTAACT+AGG | + | chr1_3:50750821-50750840 | Msa0123560:CDS | 20.0% |
| ! | CAATAAATCACACATATCAA+CGG | - | chr1_3:50748658-50748677 | None:intergenic | 25.0% |
| !!! | TCGTTTTTGGTTTATTAGAA+TGG | + | chr1_3:50749479-50749498 | Msa0123560:intron | 25.0% |
| ! | TAAATAGTCTACAGGAAAAA+GGG | - | chr1_3:50750023-50750042 | None:intergenic | 25.0% |
| ! | TTAAATAGTCTACAGGAAAA+AGG | - | chr1_3:50750024-50750043 | None:intergenic | 25.0% |
| ! | AAGATCTTTAAATAGTCTAC+AGG | - | chr1_3:50750031-50750050 | None:intergenic | 25.0% |
| ! | AGTTAAAGCAGAAAAAGAAA+AGG | - | chr1_3:50750282-50750301 | None:intergenic | 25.0% |
| ! | TATCTGTTGGTATTTATGTA+GGG | + | chr1_3:50750301-50750320 | Msa0123560:intron | 25.0% |
| ! | AACTATGGACAAATTCAAAA+TGG | + | chr1_3:50750360-50750379 | Msa0123560:intron | 25.0% |
| !!! | ATGTTTATATGACGGATTTA+TGG | + | chr1_3:50750523-50750542 | Msa0123560:intron | 25.0% |
| !! | TTTTGCTTTCCTTTATTGTT+TGG | + | chr1_3:50750647-50750666 | Msa0123560:intron | 25.0% |
| ! | TTTGCTTTCCTTTATTGTTT+GGG | + | chr1_3:50750648-50750667 | Msa0123560:intron | 25.0% |
| ! | GATAAGAAAAATCACAACAA+AGG | - | chr1_3:50750806-50750825 | None:intergenic | 25.0% |
| ! | ATCTTTATACAGACACATAA+CGG | - | chr1_3:50750940-50750959 | None:intergenic | 25.0% |
| !!! | GTAAAGGTTTTTTGGAGTTA+AGG | - | chr1_3:50748304-50748323 | None:intergenic | 30.0% |
| !!! | GTGCATAAGTAAAGGTTTTT+TGG | - | chr1_3:50748312-50748331 | None:intergenic | 30.0% |
| ACAGATCTGAAGAAATGAAA+CGG | - | chr1_3:50748365-50748384 | None:intergenic | 30.0% | |
| GAGATATGATGAATTCTAGA+AGG | + | chr1_3:50748485-50748504 | Msa0123560:exon | 30.0% | |
| ATTGATGAATTGATGTTGTG+AGG | + | chr1_3:50748674-50748693 | Msa0123560:intron | 30.0% | |
| ATGAGCTTATTAATGATCAC+TGG | + | chr1_3:50748773-50748792 | Msa0123560:intron | 30.0% | |
| GAAATTGTTAGAACAACAAC+TGG | + | chr1_3:50748859-50748878 | Msa0123560:intron | 30.0% | |
| ! | CAATGTTTGGTAACAAAGTT+CGG | + | chr1_3:50748925-50748944 | Msa0123560:intron | 30.0% |
| CTTCACTTCCTTTGTATTAT+CGG | + | chr1_3:50748981-50749000 | Msa0123560:intron | 30.0% | |
| ATCTTTCACCGATAATACAA+AGG | - | chr1_3:50748992-50749011 | None:intergenic | 30.0% | |
| TGTATTATCGGTGAAAGATT+AGG | + | chr1_3:50748993-50749012 | Msa0123560:intron | 30.0% | |
| GTATTATCGGTGAAAGATTA+GGG | + | chr1_3:50748994-50749013 | Msa0123560:intron | 30.0% | |
| AAATAATTATGGCGTCAAGT+AGG | - | chr1_3:50749077-50749096 | None:intergenic | 30.0% | |
| ATCATGCTCATCAATTTCAT+GGG | - | chr1_3:50749196-50749215 | None:intergenic | 30.0% | |
| TATCATGCTCATCAATTTCA+TGG | - | chr1_3:50749197-50749216 | None:intergenic | 30.0% | |
| CACATAAGTTATCTTTGTAC+AGG | - | chr1_3:50749324-50749343 | None:intergenic | 30.0% | |
| !! | CGTCATTTTGTTTCAACTAT+TGG | + | chr1_3:50749358-50749377 | Msa0123560:intron | 30.0% |
| GGAAATTGTGTTAGTGAATA+GGG | - | chr1_3:50749619-50749638 | None:intergenic | 30.0% | |
| TGGAAATTGTGTTAGTGAAT+AGG | - | chr1_3:50749620-50749639 | None:intergenic | 30.0% | |
| TTATTGTTAGAAAGTCTGTC+AGG | + | chr1_3:50749701-50749720 | Msa0123560:intron | 30.0% | |
| ATTAGGAGTTCATTAAACTC+TGG | + | chr1_3:50749758-50749777 | Msa0123560:intron | 30.0% | |
| TGGAAAATCAAAAGAACAGT+AGG | - | chr1_3:50749788-50749807 | None:intergenic | 30.0% | |
| ! | TAAACTCTGCAATTTTGTGA+TGG | + | chr1_3:50750097-50750116 | Msa0123560:intron | 30.0% |
| !! | TCAGCTAGAAACAGTTTTAA+TGG | + | chr1_3:50750139-50750158 | Msa0123560:intron | 30.0% |
| !! | CAGCTAGAAACAGTTTTAAT+GGG | + | chr1_3:50750140-50750159 | Msa0123560:intron | 30.0% |
| TTTCTGCTTTAACTATCTGT+TGG | + | chr1_3:50750288-50750307 | Msa0123560:intron | 30.0% | |
| CTATCTGTTGGTATTTATGT+AGG | + | chr1_3:50750300-50750319 | Msa0123560:intron | 30.0% | |
| ATTTATGTAGGGCAATGATA+TGG | + | chr1_3:50750312-50750331 | Msa0123560:intron | 30.0% | |
| CAATGATATGGATTCTTCAA+GGG | + | chr1_3:50750324-50750343 | Msa0123560:intron | 30.0% | |
| AATGATATGGATTCTTCAAG+GGG | + | chr1_3:50750325-50750344 | Msa0123560:intron | 30.0% | |
| ! | ATTGTTCCAGTGTTGTTAAA+TGG | + | chr1_3:50750393-50750412 | Msa0123560:intron | 30.0% |
| TAACAAGTGCGTAAACTAAA+TGG | - | chr1_3:50750625-50750644 | None:intergenic | 30.0% | |
| ! | TGTCATTTCCCAAACAATAA+AGG | - | chr1_3:50750659-50750678 | None:intergenic | 30.0% |
| TTGATGTTGAATCTGAAAGA+AGG | + | chr1_3:50750867-50750886 | Msa0123560:three_prime_UTR | 30.0% | |
| ATGAAAGCTTTCCAAACTAA+AGG | - | chr1_3:50751009-50751028 | None:intergenic | 30.0% | |
| CAATGAATGATAAGAACACT+TGG | + | chr1_3:50751063-50751082 | Msa0123560:three_prime_UTR | 30.0% | |
| AGTTAAGGAGAGATAGAAAG+AGG | - | chr1_3:50748289-50748308 | None:intergenic | 35.0% | |
| GTTGTTCTGTGCATAAGTAA+AGG | - | chr1_3:50748320-50748339 | None:intergenic | 35.0% | |
| TTACTTATGCACAGAACAAC+AGG | + | chr1_3:50748320-50748339 | Msa0123560:five_prime_UTR | 35.0% | |
| ! | GTGAGGTTTTGCTTTCATTT+TGG | + | chr1_3:50748691-50748710 | Msa0123560:intron | 35.0% |
| ! | TTTTGTGTGTTAAGTGCTCA+AGG | + | chr1_3:50748723-50748742 | Msa0123560:intron | 35.0% |
| ACATTGCACGTTCTTTGTTA+GGG | - | chr1_3:50748911-50748930 | None:intergenic | 35.0% | |
| AACATTGCACGTTCTTTGTT+AGG | - | chr1_3:50748912-50748931 | None:intergenic | 35.0% | |
| AACAAAGAACGTGCAATGTT+TGG | + | chr1_3:50748912-50748931 | Msa0123560:intron | 35.0% | |
| ! | AAAGAGCAACTCTGTTGTTT+CGG | - | chr1_3:50749116-50749135 | None:intergenic | 35.0% |
| ! | AACAGAGTTGCTCTTTTTGA+TGG | + | chr1_3:50749120-50749139 | Msa0123560:CDS | 35.0% |
| !! | TGCTCTTTTTGATGGTATTG+AGG | + | chr1_3:50749128-50749147 | Msa0123560:CDS | 35.0% |
| !! | TCTTTTTGATGGTATTGAGG+AGG | + | chr1_3:50749131-50749150 | Msa0123560:CDS | 35.0% |
| !! | CTTTTTGATGGTATTGAGGA+GGG | + | chr1_3:50749132-50749151 | Msa0123560:CDS | 35.0% |
| ! | GCATGATAATGAACAAGCAA+TGG | + | chr1_3:50749209-50749228 | Msa0123560:CDS | 35.0% |
| GATAATGAACAAGCAATGGA+TGG | + | chr1_3:50749213-50749232 | Msa0123560:CDS | 35.0% | |
| !! | AATGGATGGATTGCAAGATA+GGG | + | chr1_3:50749227-50749246 | Msa0123560:CDS | 35.0% |
| TATCTTTGTACAGGATAGCT+AGG | - | chr1_3:50749315-50749334 | None:intergenic | 35.0% | |
| !! | TTGTTTCTGTTGGGAAGTAA+AGG | + | chr1_3:50749434-50749453 | Msa0123560:intron | 35.0% |
| AGTAAAGGATAACTTACTGC+AGG | + | chr1_3:50749449-50749468 | Msa0123560:intron | 35.0% | |
| AAAATTATACCCTGTCCATC+CGG | + | chr1_3:50749542-50749561 | Msa0123560:intron | 35.0% | |
| TGAGCTCAAAACTCTTACAA+TGG | - | chr1_3:50749811-50749830 | None:intergenic | 35.0% | |
| CTAATAGAACCCAGGAATTT+AGG | - | chr1_3:50749865-50749884 | None:intergenic | 35.0% | |
| TCTGAATTCTAATAGAACCC+AGG | - | chr1_3:50749873-50749892 | None:intergenic | 35.0% | |
| ! | TCTACAGGAAAAAGGGTTTT+AGG | - | chr1_3:50750016-50750035 | None:intergenic | 35.0% |
| !! | AACTGTTTCTAGCTGATACA+GGG | - | chr1_3:50750135-50750154 | None:intergenic | 35.0% |
| !! | AAACTGTTTCTAGCTGATAC+AGG | - | chr1_3:50750136-50750155 | None:intergenic | 35.0% |
| GCAATGATATGGATTCTTCA+AGG | + | chr1_3:50750323-50750342 | Msa0123560:intron | 35.0% | |
| TTCCTTCACATATTGCCTAT+GGG | - | chr1_3:50750469-50750488 | None:intergenic | 35.0% | |
| ATTCCTTCACATATTGCCTA+TGG | - | chr1_3:50750470-50750489 | None:intergenic | 35.0% | |
| GTCATATAAACATGCCATTG+CGG | - | chr1_3:50750516-50750535 | None:intergenic | 35.0% | |
| GCAATGGCATGTTTATATGA+CGG | + | chr1_3:50750515-50750534 | Msa0123560:intron | 35.0% | |
| GAACTATCCAATGTTGTTGA+TGG | - | chr1_3:50750558-50750577 | None:intergenic | 35.0% | |
| ! | CTTCAGAGGGCATATATATA+GGG | - | chr1_3:50750594-50750613 | None:intergenic | 35.0% |
| AATGGAATTGATCCTTCAGA+GGG | - | chr1_3:50750607-50750626 | None:intergenic | 35.0% | |
| AAATGGAATTGATCCTTCAG+AGG | - | chr1_3:50750608-50750627 | None:intergenic | 35.0% | |
| GGAAATGACAACACATTGAT+GGG | + | chr1_3:50750669-50750688 | Msa0123560:intron | 35.0% | |
| GAAATGACAACACATTGATG+GGG | + | chr1_3:50750670-50750689 | Msa0123560:intron | 35.0% | |
| ! | AGTTGTGTCTTTTTCCTCTT+AGG | + | chr1_3:50750696-50750715 | Msa0123560:intron | 35.0% |
| AAGGATGAAGCATGCATAAA+GGG | - | chr1_3:50750990-50751009 | None:intergenic | 35.0% | |
| AAAGGATGAAGCATGCATAA+AGG | - | chr1_3:50750991-50751010 | None:intergenic | 35.0% | |
| GAAGGGGTAAAGTTGTAATC+TGG | - | chr1_3:50749055-50749074 | None:intergenic | 40.0% | |
| ATTATGGCGTCAAGTAGGAA+GGG | - | chr1_3:50749072-50749091 | None:intergenic | 40.0% | |
| AATTATGGCGTCAAGTAGGA+AGG | - | chr1_3:50749073-50749092 | None:intergenic | 40.0% | |
| !! | AAGAGCAACTCTGTTGTTTC+GGG | - | chr1_3:50749115-50749134 | None:intergenic | 40.0% |
| AATTTCATGGGAAGAAGCTG+AGG | - | chr1_3:50749184-50749203 | None:intergenic | 40.0% | |
| !! | CAATGGATGGATTGCAAGAT+AGG | + | chr1_3:50749226-50749245 | Msa0123560:CDS | 40.0% |
| !!! | TGCAGGAATTGTGTCGTTTT+TGG | + | chr1_3:50749466-50749485 | Msa0123560:intron | 40.0% |
| TGTCCTATCAGGTTCATATC+CGG | - | chr1_3:50749564-50749583 | None:intergenic | 40.0% | |
| AACACTGGTGACCCATTATT+GGG | + | chr1_3:50749593-50749612 | Msa0123560:intron | 40.0% | |
| AGTGAATAGGGCCCAATAAT+GGG | - | chr1_3:50749607-50749626 | None:intergenic | 40.0% | |
| TAGTGAATAGGGCCCAATAA+TGG | - | chr1_3:50749608-50749627 | None:intergenic | 40.0% | |
| TAGCAGAGGAAATAGAAGAG+AGG | + | chr1_3:50749651-50749670 | Msa0123560:intron | 40.0% | |
| AGCAGAGGAAATAGAAGAGA+GGG | + | chr1_3:50749652-50749671 | Msa0123560:intron | 40.0% | |
| AGGAAATAGAAGAGAGGGAA+GGG | + | chr1_3:50749657-50749676 | Msa0123560:intron | 40.0% | |
| GCTCAAAACTCTTACAATGG+TGG | - | chr1_3:50749808-50749827 | None:intergenic | 40.0% | |
| ACTTCGCTTACCTAAATTCC+TGG | + | chr1_3:50749852-50749871 | Msa0123560:intron | 40.0% | |
| CTTCGCTTACCTAAATTCCT+GGG | + | chr1_3:50749853-50749872 | Msa0123560:intron | 40.0% | |
| AAGATGTGATGCAGACATGA+AGG | - | chr1_3:50749899-50749918 | None:intergenic | 40.0% | |
| !! | ACTGTTTCTAGCTGATACAG+GGG | - | chr1_3:50750134-50750153 | None:intergenic | 40.0% |
| ATTTGTCCATAGTTCCTGAG+AGG | - | chr1_3:50750354-50750373 | None:intergenic | 40.0% | |
| TGGTCACCATTTAACAACAC+TGG | - | chr1_3:50750402-50750421 | None:intergenic | 40.0% | |
| ! | GTGTTGTTAAATGGTGACCA+TGG | + | chr1_3:50750402-50750421 | Msa0123560:intron | 40.0% |
| TCCTTCACATATTGCCTATG+GGG | - | chr1_3:50750468-50750487 | None:intergenic | 40.0% | |
| ATGTGAAGGAATGTCTTCCA+TGG | + | chr1_3:50750478-50750497 | Msa0123560:intron | 40.0% | |
| ! | CCTTCAGAGGGCATATATAT+AGG | - | chr1_3:50750595-50750614 | None:intergenic | 40.0% |
| CCTATATATATGCCCTCTGA+AGG | + | chr1_3:50750592-50750611 | Msa0123560:intron | 40.0% | |
| GGGAAATGACAACACATTGA+TGG | + | chr1_3:50750668-50750687 | Msa0123560:intron | 40.0% | |
| ! | TCTGTGTATGGTGATGTTTC+AGG | + | chr1_3:50750735-50750754 | Msa0123560:intron | 40.0% |
| CTACCAGTGAGAACATTCTT+CGG | - | chr1_3:50750780-50750799 | None:intergenic | 40.0% | |
| GCATGCTTCATCCTTTAGTT+TGG | + | chr1_3:50750995-50751014 | Msa0123560:three_prime_UTR | 40.0% | |
| TGTGTGTTAAGTGCTCAAGG+AGG | + | chr1_3:50748726-50748745 | Msa0123560:intron | 45.0% | |
| CAAGGAGGTGAATTGTGGAT+AGG | + | chr1_3:50748741-50748760 | Msa0123560:intron | 45.0% | |
| TTATGGCGTCAAGTAGGAAG+GGG | - | chr1_3:50749071-50749090 | None:intergenic | 45.0% | |
| ! | TTTGATGGTATTGAGGAGGG+TGG | + | chr1_3:50749135-50749154 | Msa0123560:CDS | 45.0% |
| CTTTGTACAGGATAGCTAGG+TGG | - | chr1_3:50749312-50749331 | None:intergenic | 45.0% | |
| CTATCAGGTTCATATCCGGA+TGG | - | chr1_3:50749560-50749579 | None:intergenic | 45.0% | |
| CATCCGGATATGAACCTGAT+AGG | + | chr1_3:50749558-50749577 | Msa0123560:intron | 45.0% | |
| ATGAACCTGATAGGACACCA+AGG | + | chr1_3:50749567-50749586 | Msa0123560:intron | 45.0% | |
| GAACACTGGTGACCCATTAT+TGG | + | chr1_3:50749592-50749611 | Msa0123560:intron | 45.0% | |
| CCTCTGCTACTACAATCTTC+TGG | - | chr1_3:50749640-50749659 | None:intergenic | 45.0% | |
| CCAGAAGATTGTAGTAGCAG+AGG | + | chr1_3:50749637-50749656 | Msa0123560:intron | 45.0% | |
| GAGGAAATAGAAGAGAGGGA+AGG | + | chr1_3:50749656-50749675 | Msa0123560:intron | 45.0% | |
| GGAAATAGAAGAGAGGGAAG+GGG | + | chr1_3:50749658-50749677 | Msa0123560:intron | 45.0% | |
| ! | GGAGAGTTACTCTCTGGTTT+AGG | + | chr1_3:50749722-50749741 | Msa0123560:intron | 45.0% |
| GCTGTCAGGTGATATACATG+AGG | + | chr1_3:50750176-50750195 | Msa0123560:intron | 45.0% | |
| GTCAGGTGATATACATGAGG+AGG | + | chr1_3:50750179-50750198 | Msa0123560:CDS | 45.0% | |
| AGGTGATATACATGAGGAGG+TGG | + | chr1_3:50750182-50750201 | Msa0123560:CDS | 45.0% | |
| GGATAATCATAACCGCATGC+TGG | + | chr1_3:50750203-50750222 | Msa0123560:CDS | 45.0% | |
| TAACCGCATGCTGGATCATA+TGG | + | chr1_3:50750212-50750231 | Msa0123560:CDS | 45.0% | |
| ACACCATATGATCCAGCATG+CGG | - | chr1_3:50750218-50750237 | None:intergenic | 45.0% | |
| ! | ATTTTTCACAACCGCCCCAT+AGG | + | chr1_3:50750451-50750470 | Msa0123560:intron | 45.0% |
| TTCACATATTGCCTATGGGG+CGG | - | chr1_3:50750465-50750484 | None:intergenic | 45.0% | |
| !! | CCAATGTTGTTGATGGCAGA+GGG | - | chr1_3:50750551-50750570 | None:intergenic | 45.0% |
| !! | TCCAATGTTGTTGATGGCAG+AGG | - | chr1_3:50750552-50750571 | None:intergenic | 45.0% |
| !!! | AATTAATTTTTTATTTGATT+AGG | + | chr1_3:50748423-50748442 | Msa0123560:intron | 5.0% |
| GATCGAGTGAATCCGTGATC+TGG | + | chr1_3:50748452-50748471 | Msa0123560:five_prime_UTR | 50.0% | |
| GTGCTCAAGGAGGTGAATTG+TGG | + | chr1_3:50748736-50748755 | Msa0123560:intron | 50.0% | |
| GATAGCTAGGTGGCAGTCTA+TGG | - | chr1_3:50749302-50749321 | None:intergenic | 50.0% | |
| GGTTCATATCCGGATGGACA+GGG | - | chr1_3:50749554-50749573 | None:intergenic | 50.0% | |
| AGGTTCATATCCGGATGGAC+AGG | - | chr1_3:50749555-50749574 | None:intergenic | 50.0% | |
| !! | TTCGACCTTGGTGTCCTATC+AGG | - | chr1_3:50749575-50749594 | None:intergenic | 50.0% |
| CTGTCAGGAGAGTTACTCTC+TGG | + | chr1_3:50749716-50749735 | Msa0123560:intron | 50.0% | |
| ! | ACTCTCTGGTTTAGGAGCTC+TGG | + | chr1_3:50749730-50749749 | Msa0123560:intron | 50.0% |
| ! | TAGGAGCTCTGGTCTGGATT+AGG | + | chr1_3:50749741-50749760 | Msa0123560:intron | 50.0% |
| GTCTGTTTGCAACAGCTGTC+AGG | + | chr1_3:50750162-50750181 | Msa0123560:intron | 50.0% | |
| ATGGCGCCACATGTCAGATT+CGG | + | chr1_3:50750421-50750440 | Msa0123560:intron | 50.0% | |
| TGACACCCGAATCTGACATG+TGG | - | chr1_3:50750430-50750449 | None:intergenic | 50.0% | |
| GCCCCATAGGCAATATGTGA+AGG | + | chr1_3:50750464-50750483 | Msa0123560:intron | 50.0% | |
| CATGCCATTGCGGCTAATGA+CGG | - | chr1_3:50750506-50750525 | None:intergenic | 50.0% | |
| CCCTCTGCCATCAACAACAT+TGG | + | chr1_3:50750548-50750567 | Msa0123560:intron | 50.0% | |
| CAGTGAGAACATTCTTCGGC+TGG | - | chr1_3:50750776-50750795 | None:intergenic | 50.0% | |
| CAGCCGAAGAATGTTCTCAC+TGG | + | chr1_3:50750774-50750793 | Msa0123560:CDS | 50.0% | |
| CGAGTGAATCCGTGATCTGG+TGG | + | chr1_3:50748455-50748474 | Msa0123560:five_prime_UTR | 55.0% | |
| GTGAATCCGTGATCTGGTGG+TGG | + | chr1_3:50748458-50748477 | Msa0123560:five_prime_UTR | 55.0% | |
| !! | AATCCGTGATCTGGTGGTGG+TGG | + | chr1_3:50748461-50748480 | Msa0123560:five_prime_UTR | 55.0% |
| TCACCACCACCACCAGATCA+CGG | - | chr1_3:50748467-50748486 | None:intergenic | 55.0% | |
| AGGAAGTGAAGCTGCTCTGC+AGG | - | chr1_3:50748972-50748991 | None:intergenic | 55.0% | |
| AGGACACCAAGGTCGAACAC+TGG | + | chr1_3:50749578-50749597 | Msa0123560:intron | 55.0% | |
| ! | CTGGTTTAGGAGCTCTGGTC+TGG | + | chr1_3:50749735-50749754 | Msa0123560:intron | 55.0% |
| TCTTCAAGGGGAGTCCTCTC+AGG | + | chr1_3:50750337-50750356 | Msa0123560:intron | 55.0% | |
| GGGAGTCCTCTCAGGAACTA+TGG | + | chr1_3:50750345-50750364 | Msa0123560:intron | 55.0% | |
| GAATCTGACATGTGGCGCCA+TGG | - | chr1_3:50750422-50750441 | None:intergenic | 55.0% | |
| TGGCGCCACATGTCAGATTC+GGG | + | chr1_3:50750422-50750441 | Msa0123560:intron | 55.0% | |
| TGCTCTGCAGGCAGAGACGT+AGG | - | chr1_3:50748960-50748979 | None:intergenic | 60.0% | |
| GGGTCACCAGTGTTCGACCT+TGG | - | chr1_3:50749587-50749606 | None:intergenic | 60.0% | |
| GAAGAGAGGGAAGGGGAGTG+AGG | + | chr1_3:50749665-50749684 | Msa0123560:intron | 60.0% | |
| ! | TGCGGCTAATGACGGTGCCA+TGG | - | chr1_3:50750498-50750517 | None:intergenic | 60.0% |
| GGCACCGTCATTAGCCGCAA+TGG | + | chr1_3:50750499-50750518 | Msa0123560:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 50748273 | 50751093 | 50748273 | ID=Msa0123560;Name=Msa0123560 |
| chr1_3 | mRNA | 50748273 | 50751093 | 50748273 | ID=Msa0123560-mRNA-1;Parent=Msa0123560;Name=Msa0123560-mRNA-1;_AED=0.20;_eAED=0.20;_QI=114|0.75|1|1|0.5|0.6|5|247|107 |
| chr1_3 | exon | 50748273 | 50748341 | 50748273 | ID=Msa0123560-mRNA-1:exon:15495;Parent=Msa0123560-mRNA-1 |
| chr1_3 | exon | 50748445 | 50748506 | 50748445 | ID=Msa0123560-mRNA-1:exon:15496;Parent=Msa0123560-mRNA-1 |
| chr1_3 | exon | 50749107 | 50749266 | 50749107 | ID=Msa0123560-mRNA-1:exon:15497;Parent=Msa0123560-mRNA-1 |
| chr1_3 | exon | 50750177 | 50750233 | 50750177 | ID=Msa0123560-mRNA-1:exon:15498;Parent=Msa0123560-mRNA-1 |
| chr1_3 | exon | 50750757 | 50751093 | 50750757 | ID=Msa0123560-mRNA-1:exon:15499;Parent=Msa0123560-mRNA-1 |
| chr1_3 | five_prime_UTR | 50748273 | 50748341 | 50748273 | ID=Msa0123560-mRNA-1:five_prime_utr;Parent=Msa0123560-mRNA-1 |
| chr1_3 | five_prime_UTR | 50748445 | 50748489 | 50748445 | ID=Msa0123560-mRNA-1:five_prime_utr;Parent=Msa0123560-mRNA-1 |
| chr1_3 | CDS | 50748490 | 50748506 | 50748490 | ID=Msa0123560-mRNA-1:cds;Parent=Msa0123560-mRNA-1 |
| chr1_3 | CDS | 50749107 | 50749266 | 50749107 | ID=Msa0123560-mRNA-1:cds;Parent=Msa0123560-mRNA-1 |
| chr1_3 | CDS | 50750177 | 50750233 | 50750177 | ID=Msa0123560-mRNA-1:cds;Parent=Msa0123560-mRNA-1 |
| chr1_3 | CDS | 50750757 | 50750846 | 50750757 | ID=Msa0123560-mRNA-1:cds;Parent=Msa0123560-mRNA-1 |
| chr1_3 | three_prime_UTR | 50750847 | 50751093 | 50750847 | ID=Msa0123560-mRNA-1:three_prime_utr;Parent=Msa0123560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
