Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0167010 | XP_013468353.1 | 90.870 | 471 | 41 | 1 | 1 | 469 | 1 | 471 | 0.0 | 866 |
Msa0167010 | XP_013468353.1 | 91.667 | 420 | 35 | 0 | 474 | 893 | 60 | 479 | 0.0 | 788 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0167010 | sp|F4KCE9|KNL2_ARATH | 43.609 | 133 | 69 | 4 | 18 | 146 | 11 | 141 | 5.21e-28 | 124 |
Msa0167010 | sp|F4KCE9|KNL2_ARATH | 46.809 | 94 | 48 | 2 | 469 | 562 | 50 | 141 | 2.67e-19 | 96.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0167010 | A0A072VWG5 | 90.870 | 471 | 41 | 1 | 1 | 469 | 1 | 471 | 0.0 | 866 |
Msa0167010 | A0A072VWG5 | 91.667 | 420 | 35 | 0 | 474 | 893 | 60 | 479 | 0.0 | 788 |
Gene ID | Type | Classification |
---|---|---|
Msa0167010 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026800 | Msa0167010 | 0.838418 | 2.910198e-57 | -8.615850e-47 |
Msa0028420 | Msa0167010 | 0.805397 | 1.361493e-49 | -8.615850e-47 |
Msa0047070 | Msa0167010 | 0.802713 | 4.923673e-49 | -8.615850e-47 |
Msa0090400 | Msa0167010 | 0.814363 | 1.600909e-51 | -8.615850e-47 |
Msa0122040 | Msa0167010 | 0.847137 | 1.398956e-59 | -8.615850e-47 |
Msa0122510 | Msa0167010 | 0.816747 | 4.715013e-52 | -8.615850e-47 |
Msa0137880 | Msa0167010 | 0.820866 | 5.470696e-53 | -8.615850e-47 |
Msa0167010 | Msa0225680 | 0.801076 | 1.068045e-48 | -8.615850e-47 |
Msa0167010 | Msa0267110 | 0.815294 | 9.952351e-52 | -8.615850e-47 |
Msa0167010 | Msa0379770 | 0.834165 | 3.509029e-56 | -8.615850e-47 |
Msa0167010 | Msa0419700 | 0.826921 | 2.080278e-54 | -8.615850e-47 |
Msa0167010 | Msa0428150 | 0.842296 | 2.819461e-58 | -8.615850e-47 |
Msa0167010 | Msa0442830 | 0.801056 | 1.078231e-48 | -8.615850e-47 |
Msa0167010 | Msa0462500 | 0.839352 | 1.667844e-57 | -8.615850e-47 |
Msa0167010 | Msa0511750 | 0.812531 | 4.044784e-51 | -8.615850e-47 |
Msa0167010 | Msa0524190 | 0.800231 | 1.587852e-48 | -8.615850e-47 |
Msa0167010 | Msa0683570 | 0.809103 | 2.232478e-50 | -8.615850e-47 |
Msa0167010 | Msa0919770 | 0.814948 | 1.187561e-51 | -8.615850e-47 |
Msa0167010 | Msa0945110 | 0.818729 | 1.683431e-52 | -8.615850e-47 |
Msa0167010 | Msa0981950 | 0.807151 | 5.813407e-50 | -8.615850e-47 |
Msa0167010 | Msa1020560 | 0.806243 | 9.043340e-50 | -8.615850e-47 |
Msa0167010 | Msa1029250 | 0.805253 | 1.459737e-49 | -8.615850e-47 |
Msa0167010 | Msa1097980 | 0.805824 | 1.107501e-49 | -8.615850e-47 |
Msa0167010 | Msa1223470 | 0.804550 | 2.046871e-49 | -8.615850e-47 |
Msa0167010 | Msa1225700 | 0.829116 | 6.160811e-55 | -8.615850e-47 |
Msa0167010 | Msa1229500 | 0.803139 | 4.020157e-49 | -8.615850e-47 |
Msa0167010 | Msa1367370 | 0.804739 | 1.869121e-49 | -8.615850e-47 |
Msa0167010 | Msa1369550 | 0.831912 | 1.275666e-55 | -8.615850e-47 |
Msa0167010 | Msa1373650 | 0.810731 | 9.965235e-51 | -8.615850e-47 |
Msa0167010 | Msa1391770 | 0.802866 | 4.576866e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0167010 | MtrunA17_Chr1g0182611 | 90.870 | 471 | 41 | 1 | 1 | 469 | 1 | 471 | 0.0 | 866 |
Msa0167010 | MtrunA17_Chr1g0182611 | 91.667 | 420 | 35 | 0 | 474 | 893 | 60 | 479 | 0.0 | 788 |
Msa0167010 | MtrunA17_Chr1g0182621 | 68.768 | 349 | 97 | 3 | 545 | 893 | 246 | 582 | 9.49e-144 | 439 |
Msa0167010 | MtrunA17_Chr1g0182621 | 68.622 | 341 | 95 | 3 | 129 | 469 | 246 | 574 | 3.16e-139 | 427 |
Msa0167010 | MtrunA17_Chr1g0182621 | 58.537 | 328 | 120 | 4 | 22 | 344 | 26 | 342 | 3.80e-114 | 361 |
Msa0167010 | MtrunA17_Chr1g0182621 | 56.357 | 291 | 113 | 3 | 473 | 760 | 63 | 342 | 3.27e-94 | 308 |
Msa0167010 | MtrunA17_Chr7g0231611 | 35.714 | 140 | 80 | 5 | 1 | 137 | 1 | 133 | 5.54e-18 | 86.7 |
Msa0167010 | MtrunA17_Chr5g0416851 | 35.714 | 140 | 80 | 5 | 1 | 137 | 1 | 133 | 6.36e-18 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0167010 | AT5G02520.1 | 43.609 | 133 | 69 | 4 | 18 | 146 | 11 | 141 | 5.30e-29 | 124 |
Msa0167010 | AT5G02520.1 | 46.809 | 94 | 48 | 2 | 469 | 562 | 50 | 141 | 2.72e-20 | 96.7 |
Msa0167010 | AT5G02520.3 | 43.609 | 133 | 69 | 4 | 18 | 146 | 11 | 141 | 7.54e-29 | 123 |
Msa0167010 | AT5G02520.3 | 46.809 | 94 | 48 | 2 | 469 | 562 | 50 | 141 | 3.47e-20 | 96.3 |
Msa0167010 | AT5G02520.2 | 44.030 | 134 | 68 | 5 | 18 | 146 | 11 | 142 | 3.47e-28 | 121 |
Msa0167010 | AT5G02520.2 | 47.368 | 95 | 47 | 3 | 469 | 562 | 50 | 142 | 1.72e-19 | 94.0 |
Msa0167010 | AT1G58210.1 | 39.823 | 113 | 64 | 2 | 3 | 115 | 45 | 153 | 1.91e-16 | 81.3 |
Find 239 sgRNAs with CRISPR-Local
Find 667 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACCATCAGATGATATTTC+TGG | 0.152483 | 1_4:+48662727 | None:intergenic |
TTACCATCAGATGATATTTC+TGG | 0.152483 | 1_4:+48669014 | None:intergenic |
TTACCATCAAACAAGATTTC+TGG | 0.197160 | 1_4:+48669450 | None:intergenic |
TTCTACCTCGCTTAGAGTTT+TGG | 0.216024 | 1_4:-48661798 | Msa0167010:CDS |
TTCTACCTCGCTTAGAGTTT+TGG | 0.216024 | 1_4:-48668047 | Msa0167010:CDS |
CTCTGTTTCTCCAGAGTCAT+TGG | 0.218790 | 1_4:-48662054 | Msa0167010:CDS |
TGCAAGGGAGATAATTAATT+AGG | 0.247826 | 1_4:-48661272 | Msa0167010:three_prime_UTR |
CGGTAACAGGCTGTTTCTTC+TGG | 0.258466 | 1_4:+48662408 | None:intergenic |
CGGTAACAGGCTGTTTCTTC+TGG | 0.258466 | 1_4:+48668657 | None:intergenic |
GATTAACAGGGCAGAGATTT+AGG | 0.261531 | 1_4:-48661217 | Msa0167010:three_prime_UTR |
CTCAGTTTCTCCAGAGTCAT+TGG | 0.268603 | 1_4:-48668303 | Msa0167010:CDS |
ACAAATGGTATATGATTAAC+AGG | 0.290151 | 1_4:-48661230 | Msa0167010:three_prime_UTR |
TCAAACACCTATTTATAATA+TGG | 0.307116 | 1_4:-48661770 | Msa0167010:intron |
TCAAACACCTATTTATAATA+TGG | 0.307116 | 1_4:-48668019 | Msa0167010:intron |
GAGGTTGTTATAAGAGAAAA+AGG | 0.309998 | 1_4:-48662199 | Msa0167010:CDS |
GAGGTTGTTATAAGAGAAAA+AGG | 0.309998 | 1_4:-48668448 | Msa0167010:CDS |
TGTCAAGAAATCTTGTTTGA+TGG | 0.311615 | 1_4:-48663166 | Msa0167010:intron |
CGGAAGCAGCAGCCTGCATC+TGG | 0.314800 | 1_4:-48662853 | Msa0167010:CDS |
CGGAAGCAGCAGCCTGCATC+TGG | 0.314800 | 1_4:-48669140 | Msa0167010:CDS |
TAGAGGCTCTTCACCATCAT+TGG | 0.318246 | 1_4:-48661520 | Msa0167010:three_prime_UTR |
AGTGCATAGCTTTCCCAGTT+TGG | 0.320250 | 1_4:+48669549 | None:intergenic |
TCACATACCATATTATAAAT+AGG | 0.323614 | 1_4:+48661763 | None:intergenic |
TCACATACCATATTATAAAT+AGG | 0.323614 | 1_4:+48668012 | None:intergenic |
TCTTTATCTGGATGTGTTGC+CGG | 0.325220 | 1_4:+48662380 | None:intergenic |
TCTTTATCTGGATGTGTTGC+CGG | 0.325220 | 1_4:+48668629 | None:intergenic |
CCGCGAGATTATAGAAATTC+AGG | 0.330860 | 1_4:-48661568 | Msa0167010:CDS |
TGTCCAGAAATCTTGTTTGA+TGG | 0.334113 | 1_4:-48669453 | Msa0167010:intron |
GAGCAGCGCACGCTGGAAAA+TGG | 0.336004 | 1_4:-48663471 | Msa0167010:CDS |
GAGCAGCGCACGCTGGAAAA+TGG | 0.336004 | 1_4:-48669760 | Msa0167010:CDS |
AGAGCATAGCTTTCCCAGTT+TGG | 0.337878 | 1_4:+48663262 | None:intergenic |
TGATTCGGCCAATGCTGTTC+CGG | 0.339045 | 1_4:-48663206 | Msa0167010:CDS |
TGATTCGGCCAATGCTGTTC+CGG | 0.339045 | 1_4:-48669493 | Msa0167010:CDS |
GGAATAGTAAACACATTGTC+TGG | 0.341105 | 1_4:-48662278 | Msa0167010:CDS |
GGAATAGTAAACACATTGTC+TGG | 0.341105 | 1_4:-48668527 | Msa0167010:CDS |
GTGGAGATCTGGTCTTTATC+TGG | 0.363337 | 1_4:+48662368 | None:intergenic |
TCATATACCATTTGTATGTT+CGG | 0.364214 | 1_4:+48661238 | None:intergenic |
AGTGGGGTTGATGTTACTTA+TGG | 0.365193 | 1_4:-48662928 | Msa0167010:CDS |
AGTGGGGTTGATGTTACTTA+TGG | 0.365193 | 1_4:-48669215 | Msa0167010:CDS |
GCGGAGATCTGGTCTTTATC+TGG | 0.379385 | 1_4:+48668617 | None:intergenic |
GATGGTGAAGAGCCTCTAAA+AGG | 0.383621 | 1_4:+48661525 | None:intergenic |
CAGAAGAAACAGCCTGTTAC+CGG | 0.388877 | 1_4:-48662407 | Msa0167010:CDS |
CAGAAGAAACAGCCTGTTAC+CGG | 0.388877 | 1_4:-48668656 | Msa0167010:CDS |
AGAGGCTCTTCACCATCATT+GGG | 0.392278 | 1_4:-48661519 | Msa0167010:three_prime_UTR |
AGAGTTTAACATTATGCAAC+CGG | 0.398439 | 1_4:+48662432 | None:intergenic |
AGAGTTTAACATTATGCAAC+CGG | 0.398439 | 1_4:+48668681 | None:intergenic |
AACCCCACTCATCTCCTTTG+AGG | 0.416310 | 1_4:+48662942 | None:intergenic |
AACCCCACTCATCTCCTTTG+AGG | 0.416310 | 1_4:+48669229 | None:intergenic |
GAGGATTCTCTTCCACTGTA+TGG | 0.421691 | 1_4:-48661074 | Msa0167010:three_prime_UTR |
GGTGTTGCCTGACGAGGCCC+TGG | 0.428575 | 1_4:-48663004 | Msa0167010:CDS |
GCAAGGGAGATAATTAATTA+GGG | 0.429282 | 1_4:-48661271 | Msa0167010:three_prime_UTR |
GGGCAGAGATTTAGGCATAA+TGG | 0.434677 | 1_4:-48661209 | Msa0167010:three_prime_UTR |
TCTGTTTCTCCAGAGTCATT+GGG | 0.438436 | 1_4:-48662053 | Msa0167010:CDS |
TCAGTTTCTCCAGAGTCATT+GGG | 0.439624 | 1_4:-48668302 | Msa0167010:CDS |
CAATCTCCCGTGGTCTTATC+CGG | 0.440181 | 1_4:+48662548 | None:intergenic |
CAATCTCCCGTGGTCTTATC+CGG | 0.440181 | 1_4:+48668797 | None:intergenic |
TCCTACTTCTTTGGTATCAC+CGG | 0.443039 | 1_4:-48662567 | Msa0167010:CDS |
TCCTACTTCTTTGGTATCAC+CGG | 0.443039 | 1_4:-48668816 | Msa0167010:CDS |
GGCATTCCTCGAAGATGAAC+GGG | 0.446700 | 1_4:-48662519 | Msa0167010:CDS |
GGCATTCCTCGAAGATGAAC+GGG | 0.446700 | 1_4:-48668768 | Msa0167010:CDS |
GGTGAGGTCAATGTTGTTCA+TGG | 0.450542 | 1_4:-48662479 | Msa0167010:CDS |
TCTAGGTTACTTTATACGAT+TGG | 0.451256 | 1_4:-48670968 | Msa0167010:intron |
TTCTTCTAGTTTCCGACGAA+CGG | 0.453700 | 1_4:-48671073 | Msa0167010:intron |
GACACCCATTCAGTCACAAA+AGG | 0.454994 | 1_4:-48662300 | Msa0167010:CDS |
GACACCCATTCAGTCACAAA+AGG | 0.454994 | 1_4:-48668549 | Msa0167010:CDS |
GTTGCCGGATCTCCGGTAAC+AGG | 0.455494 | 1_4:+48662395 | None:intergenic |
GTTGCCGGATCTCCGGTAAC+AGG | 0.455494 | 1_4:+48668644 | None:intergenic |
GATCTCCGCCTTACCAGCCT+TGG | 0.465767 | 1_4:-48668603 | Msa0167010:CDS |
ACATGTCCCGTTCATCTTCG+AGG | 0.466823 | 1_4:+48662513 | None:intergenic |
ACATGTCCCGTTCATCTTCG+AGG | 0.466823 | 1_4:+48668762 | None:intergenic |
GTCAATGTTGTTCATGGTAG+TGG | 0.469034 | 1_4:-48668722 | Msa0167010:CDS |
TGTATGGAGCTGAGCTCCCT+TGG | 0.471768 | 1_4:-48661058 | Msa0167010:three_prime_UTR |
AGGCTGGTAAGGTGGAGATC+TGG | 0.472582 | 1_4:+48662357 | None:intergenic |
AGGCTGGTAAGGCGGAGATC+TGG | 0.473527 | 1_4:+48668606 | None:intergenic |
GGTGGGGTCAATGTTGTTCA+TGG | 0.475032 | 1_4:-48668728 | Msa0167010:CDS |
GGAGATGTGAGTAGGTAGCT+AGG | 0.475346 | 1_4:-48661188 | Msa0167010:three_prime_UTR |
GATCTCCACCTTACCAGCCT+TGG | 0.478185 | 1_4:-48662354 | Msa0167010:CDS |
ACAGCCTGTTACCGGAGATC+CGG | 0.478659 | 1_4:-48662399 | Msa0167010:CDS |
ACAGCCTGTTACCGGAGATC+CGG | 0.478659 | 1_4:-48668648 | Msa0167010:CDS |
GACCACGGGAGATTGCAATA+AGG | 0.479142 | 1_4:-48662540 | Msa0167010:CDS |
GACCACGGGAGATTGCAATA+AGG | 0.479142 | 1_4:-48668789 | Msa0167010:CDS |
TGGATGTGTTGCCGGATCTC+CGG | 0.481700 | 1_4:+48662388 | None:intergenic |
TGGATGTGTTGCCGGATCTC+CGG | 0.481700 | 1_4:+48668637 | None:intergenic |
AGGTTACTTTATACGATTGG+TGG | 0.484584 | 1_4:-48670965 | Msa0167010:CDS |
ATCTGAAGCTGATATTGATT+CGG | 0.486466 | 1_4:-48663221 | Msa0167010:CDS |
ATCTGAAGCTGATATTGATT+CGG | 0.486466 | 1_4:-48669508 | Msa0167010:CDS |
GGTGTTGCCTGACGAGGCCC+AGG | 0.492009 | 1_4:-48669291 | Msa0167010:CDS |
AATATATACCAGCCCAATGA+TGG | 0.497740 | 1_4:+48661507 | None:intergenic |
GCTCTAGAATGCACCGGAGA+AGG | 0.500619 | 1_4:-48663244 | Msa0167010:CDS |
AAATTTCATTCCTACTTCGT+TGG | 0.500725 | 1_4:-48663025 | Msa0167010:CDS |
AAATTTCATTCCTACTTCGT+TGG | 0.500725 | 1_4:-48669312 | Msa0167010:CDS |
GAACAAAACACAAGATAGAA+AGG | 0.502201 | 1_4:+48661106 | None:intergenic |
GAAGAAATGGTTGCAGTTGG+AGG | 0.503417 | 1_4:+48671111 | None:intergenic |
GGAAACCGTTTAGCCATCTC+TGG | 0.503556 | 1_4:-48670924 | Msa0167010:CDS |
AAGTGCAACATCACTCTCAA+TGG | 0.503646 | 1_4:-48671145 | None:intergenic |
GCACTAGAATGCACCGGAGA+AGG | 0.506282 | 1_4:-48669531 | Msa0167010:CDS |
GTCAATGTTGTTCATGGTAG+TGG | 0.510692 | 1_4:-48662473 | Msa0167010:CDS |
AGAAGTGGAAACTCGTGATT+CGG | 0.511753 | 1_4:-48662785 | Msa0167010:CDS |
AGAAGTGGAAACTCGTGATT+CGG | 0.511753 | 1_4:-48669072 | Msa0167010:CDS |
CTGTAAAATCTCCACAAGGA+AGG | 0.520970 | 1_4:-48662118 | Msa0167010:CDS |
CTGTAAAATCTCCACAAGGA+AGG | 0.520970 | 1_4:-48668367 | Msa0167010:CDS |
TTGGAAGAAATGGTTGCAGT+TGG | 0.521784 | 1_4:+48671108 | None:intergenic |
TGGTATATATGTTATCACTA+GGG | 0.526872 | 1_4:-48663505 | Msa0167010:CDS |
TACACTATCCGGAACAGCAT+TGG | 0.528438 | 1_4:+48663198 | None:intergenic |
TACACTATCCGGAACAGCAT+TGG | 0.528438 | 1_4:+48669485 | None:intergenic |
ATTACAACCGAACATACAAA+TGG | 0.528654 | 1_4:-48661245 | Msa0167010:three_prime_UTR |
CTACGATGACCTCCAGATGC+AGG | 0.528905 | 1_4:+48662841 | None:intergenic |
CTACGATGACCTCCAGATGC+AGG | 0.528905 | 1_4:+48669128 | None:intergenic |
ACACCCATTCAGTCACAAAA+GGG | 0.532185 | 1_4:-48662299 | Msa0167010:CDS |
ACACCCATTCAGTCACAAAA+GGG | 0.532185 | 1_4:-48668548 | Msa0167010:CDS |
GTTGATGTTACTTATGGTAG+TGG | 0.532246 | 1_4:-48662922 | Msa0167010:CDS |
GTTGATGTTACTTATGGTAG+TGG | 0.532246 | 1_4:-48669209 | Msa0167010:CDS |
AATGGTTGCAGTTGGAGGAG+TGG | 0.532867 | 1_4:+48671116 | None:intergenic |
GGAAAATGCAAGAAACCATT+CGG | 0.536222 | 1_4:-48662982 | Msa0167010:CDS |
AGATGCCAGAGATGGCTAAA+CGG | 0.536792 | 1_4:+48670919 | None:intergenic |
AAAAGAATGCAAAGCCTCAA+AGG | 0.537351 | 1_4:-48662956 | Msa0167010:CDS |
AAAAGAATGCAAAGCCTCAA+AGG | 0.537351 | 1_4:-48669243 | Msa0167010:CDS |
TGTAAAATCTCCACAAGGAA+GGG | 0.537405 | 1_4:-48662117 | Msa0167010:CDS |
TGTAAAATCTCCACAAGGAA+GGG | 0.537405 | 1_4:-48668366 | Msa0167010:CDS |
GGAAAATGCAAGAAACCATT+CGG | 0.539873 | 1_4:-48669269 | Msa0167010:CDS |
CAAATTGCAGATACACTATC+CGG | 0.539970 | 1_4:+48663187 | None:intergenic |
AACATTAATAGCACGTAACC+TGG | 0.544388 | 1_4:+48662882 | None:intergenic |
AACATTAATAGCACGTAACC+TGG | 0.544388 | 1_4:+48669169 | None:intergenic |
ATATACCATCGGCAGTCTCA+AGG | 0.545294 | 1_4:+48663520 | None:intergenic |
ATATACCATCGGCAGTCTCA+AGG | 0.545294 | 1_4:+48669809 | None:intergenic |
GAGCTCTACCTCAACAGAAG+TGG | 0.545818 | 1_4:-48662800 | Msa0167010:CDS |
GAGCTCTACCTCAACAGAAG+TGG | 0.545818 | 1_4:-48669087 | Msa0167010:CDS |
AGTAAACACATTGTCTGGGC+AGG | 0.549663 | 1_4:-48662273 | Msa0167010:CDS |
AGTAAACACATTGTCTGGGC+AGG | 0.549663 | 1_4:-48668522 | Msa0167010:CDS |
TTCGTTGGTGTTGCCTGACG+AGG | 0.551013 | 1_4:-48663010 | Msa0167010:CDS |
TTCGTTGGTGTTGCCTGACG+AGG | 0.551013 | 1_4:-48669297 | Msa0167010:CDS |
GCTCTTCACCATCATTGGGC+TGG | 0.552717 | 1_4:-48661515 | Msa0167010:intron |
ATGTTGTTCATGGTAGTGGC+AGG | 0.553357 | 1_4:-48662469 | Msa0167010:CDS |
ATGTTGTTCATGGTAGTGGC+AGG | 0.553357 | 1_4:-48668718 | Msa0167010:CDS |
GACATGTCAATTAAGACGGG+TGG | 0.553490 | 1_4:-48668746 | Msa0167010:CDS |
CAAATTGCAGATACACTATC+CGG | 0.554156 | 1_4:+48669474 | None:intergenic |
ATCAGCTTCAGATCCTTCTC+CGG | 0.554639 | 1_4:+48663231 | None:intergenic |
ATCAGCTTCAGATCCTTCTC+CGG | 0.554639 | 1_4:+48669518 | None:intergenic |
ATGGTATATATGTTATCACT+AGG | 0.556691 | 1_4:-48663506 | Msa0167010:CDS |
ACTGCAACCATTTCTTCCAA+TGG | 0.556744 | 1_4:-48671105 | Msa0167010:CDS |
CTGCTCGTTCATGAAACCCC+TGG | 0.559015 | 1_4:+48669777 | None:intergenic |
GCGAAAATAGACATGGTACC+AGG | 0.560344 | 1_4:-48662900 | Msa0167010:CDS |
GCGAAAATAGACATGGTACC+AGG | 0.560344 | 1_4:-48669187 | Msa0167010:CDS |
AAGCCTCAAAGGAGATGAGT+GGG | 0.564158 | 1_4:-48662945 | Msa0167010:CDS |
AAGCCTCAAAGGAGATGAGT+GGG | 0.564158 | 1_4:-48669232 | Msa0167010:CDS |
ACTGAAGTCTGAAGTGTGCA+AGG | 0.565051 | 1_4:-48661288 | Msa0167010:three_prime_UTR |
TCGTCGGAAACTAGAAGAAG+TGG | 0.565214 | 1_4:+48671077 | None:intergenic |
GCATAGCTTTCCCAGTTTGG+AGG | 0.565501 | 1_4:+48663265 | None:intergenic |
GCATAGCTTTCCCAGTTTGG+AGG | 0.565501 | 1_4:+48669552 | None:intergenic |
AAGCAGCAGCCTGCATCTGG+AGG | 0.566088 | 1_4:-48662850 | Msa0167010:CDS |
AAGCAGCAGCCTGCATCTGG+AGG | 0.566088 | 1_4:-48669137 | Msa0167010:CDS |
GCAGGAATAGACGTAGTGCC+CGG | 0.566956 | 1_4:-48662451 | Msa0167010:CDS |
GCAGGAATAGACGTAGTGCC+CGG | 0.566956 | 1_4:-48668700 | Msa0167010:CDS |
TCAGGCAACACCAACGAAGT+AGG | 0.568738 | 1_4:+48663015 | None:intergenic |
TCAGGCAACACCAACGAAGT+AGG | 0.568738 | 1_4:+48669302 | None:intergenic |
GGCATAATGGAGATGTGAGT+AGG | 0.571720 | 1_4:-48661196 | Msa0167010:three_prime_UTR |
GGAAAAGAGTGATGGAGGAC+TGG | 0.572017 | 1_4:-48662333 | Msa0167010:CDS |
GGAAAAGAGTGATGGAGGAC+TGG | 0.572017 | 1_4:-48668582 | Msa0167010:CDS |
AGGCATTCCTCGAAGATGAA+CGG | 0.572872 | 1_4:-48662520 | Msa0167010:CDS |
AGGCATTCCTCGAAGATGAA+CGG | 0.572872 | 1_4:-48668769 | Msa0167010:CDS |
TCCGGTGATACCAAAGAAGT+AGG | 0.573504 | 1_4:+48662566 | None:intergenic |
TCCGGTGATACCAAAGAAGT+AGG | 0.573504 | 1_4:+48668815 | None:intergenic |
GGATACAAGTCACTCGAACA+AGG | 0.576987 | 1_4:-48662096 | Msa0167010:CDS |
GGATACAAGTCACTCGAACA+AGG | 0.576987 | 1_4:-48668345 | Msa0167010:CDS |
ACGAGTTTCCACTTCTGTTG+AGG | 0.577453 | 1_4:+48662792 | None:intergenic |
ACGAGTTTCCACTTCTGTTG+AGG | 0.577453 | 1_4:+48669079 | None:intergenic |
CATGAACGAGCAGCGCACGC+TGG | 0.579334 | 1_4:-48663478 | Msa0167010:CDS |
CATGAACGAGCAGCGCACGC+TGG | 0.579334 | 1_4:-48669767 | Msa0167010:CDS |
GGTATATATGTTATCACTAG+GGG | 0.588021 | 1_4:-48663504 | Msa0167010:CDS |
CATCCAGAAATATCATCTGA+TGG | 0.590199 | 1_4:-48662730 | Msa0167010:intron |
CATCCAGAAATATCATCTGA+TGG | 0.590199 | 1_4:-48669017 | Msa0167010:intron |
AGCTATGCTCTAGAATGCAC+CGG | 0.591217 | 1_4:-48663250 | Msa0167010:CDS |
ACGGGACATGTCAATTAAGA+CGG | 0.591957 | 1_4:-48662501 | Msa0167010:CDS |
ACGGGACATGTCAATTAAGA+CGG | 0.591957 | 1_4:-48668750 | Msa0167010:CDS |
ATGGTATATATGTTATCACC+AGG | 0.593857 | 1_4:-48669795 | Msa0167010:CDS |
CGGGACATGTCAATTAAGAC+GGG | 0.595490 | 1_4:-48662500 | Msa0167010:CDS |
CGGGACATGTCAATTAAGAC+GGG | 0.595490 | 1_4:-48668749 | Msa0167010:CDS |
CGTCGGAAACTAGAAGAAGT+GGG | 0.595818 | 1_4:+48671078 | None:intergenic |
ACATGTCAATTAAGACGGGT+GGG | 0.599000 | 1_4:-48668745 | Msa0167010:CDS |
TGACTTGTATCCCTTCCTTG+TGG | 0.599408 | 1_4:+48662107 | None:intergenic |
TGACTTGTATCCCTTCCTTG+TGG | 0.599408 | 1_4:+48668356 | None:intergenic |
AGTGTAATTTATCTAACCAA+GGG | 0.599817 | 1_4:+48661042 | None:intergenic |
TCTGGAAGAGATGCCAGAGA+TGG | 0.599841 | 1_4:+48670911 | None:intergenic |
CCTGAATTTCTATAATCTCG+CGG | 0.600251 | 1_4:+48661568 | None:intergenic |
TGCCTTATTGCAATCTCCCG+TGG | 0.601695 | 1_4:+48662538 | None:intergenic |
TGCCTTATTGCAATCTCCCG+TGG | 0.601695 | 1_4:+48668787 | None:intergenic |
GTGAGTAAACAACCGTTCGT+CGG | 0.603870 | 1_4:+48671061 | None:intergenic |
TATACCATCGGCAGTCTCAA+GGG | 0.605137 | 1_4:+48663521 | None:intergenic |
TATACCATCGGCAGTCTCAA+GGG | 0.605137 | 1_4:+48669810 | None:intergenic |
GAATAGTAAACACATTGTCT+GGG | 0.607705 | 1_4:-48662277 | Msa0167010:CDS |
GAATAGTAAACACATTGTCT+GGG | 0.607705 | 1_4:-48668526 | Msa0167010:CDS |
CCAGCCTTGGAAAAGAGTGA+TGG | 0.608271 | 1_4:-48662341 | Msa0167010:CDS |
CCAGCCTTGGAAAAGAGTGA+TGG | 0.608271 | 1_4:-48668590 | Msa0167010:CDS |
GATACAAGTCACTCGAACAA+GGG | 0.609110 | 1_4:-48662095 | Msa0167010:CDS |
GATACAAGTCACTCGAACAA+GGG | 0.609110 | 1_4:-48668344 | Msa0167010:CDS |
GGTATATATGTTATCACCAG+GGG | 0.609955 | 1_4:-48669793 | Msa0167010:CDS |
GGGAGCTCAGCTCCATACAG+TGG | 0.612646 | 1_4:+48661062 | None:intergenic |
GAGTGTAATTTATCTAACCA+AGG | 0.612988 | 1_4:+48661041 | None:intergenic |
AGCTATGCACTAGAATGCAC+CGG | 0.615493 | 1_4:-48669537 | Msa0167010:CDS |
GGTGATAACATATATACCAT+CGG | 0.618382 | 1_4:+48669798 | None:intergenic |
ACAGTTGAAACAGAAGCAGT+TGG | 0.619629 | 1_4:-48662173 | Msa0167010:CDS |
CTGCATCTGGAGGTCATCGT+AGG | 0.620919 | 1_4:-48662840 | Msa0167010:CDS |
CTGCATCTGGAGGTCATCGT+AGG | 0.620919 | 1_4:-48669127 | Msa0167010:CDS |
GCCTTGGAAAAGAGTGATGG+AGG | 0.621071 | 1_4:-48662338 | Msa0167010:CDS |
GCCTTGGAAAAGAGTGATGG+AGG | 0.621071 | 1_4:-48668587 | Msa0167010:CDS |
AGTGATAACATATATACCAT+CGG | 0.622033 | 1_4:+48663509 | None:intergenic |
GTATCACCGGATAAGACCAC+GGG | 0.626364 | 1_4:-48662554 | Msa0167010:CDS |
GTATCACCGGATAAGACCAC+GGG | 0.626364 | 1_4:-48668803 | Msa0167010:CDS |
CATGTCAATTAAGACGGGTG+GGG | 0.626788 | 1_4:-48668744 | Msa0167010:CDS |
TGAACAGCAAGGATCTGCAA+TGG | 0.630789 | 1_4:+48661140 | None:intergenic |
GTGTTGCCTGACGAGGCCCT+GGG | 0.635492 | 1_4:-48663003 | Msa0167010:CDS |
TGGCTCGTTAAATCATCTCA+AGG | 0.637214 | 1_4:-48670945 | Msa0167010:CDS |
CATGTCAATTAAGACGGGTG+AGG | 0.637260 | 1_4:-48662495 | Msa0167010:CDS |
GAGTTTAACATTATGCAACC+GGG | 0.641017 | 1_4:+48662433 | None:intergenic |
GAGTTTAACATTATGCAACC+GGG | 0.641017 | 1_4:+48668682 | None:intergenic |
GTCGGAAACTAGAAGAAGTG+GGG | 0.641310 | 1_4:+48671079 | None:intergenic |
CTGAAGTCTGAAGTGTGCAA+GGG | 0.642669 | 1_4:-48661287 | Msa0167010:three_prime_UTR |
CAATGACTCTGGAGAAACTG+AGG | 0.645689 | 1_4:+48668304 | None:intergenic |
AAAGCCTCAAAGGAGATGAG+TGG | 0.652543 | 1_4:-48662946 | Msa0167010:CDS |
AAAGCCTCAAAGGAGATGAG+TGG | 0.652543 | 1_4:-48669233 | Msa0167010:CDS |
AAAAGAGAGACTGAACAGCA+AGG | 0.661526 | 1_4:+48661129 | None:intergenic |
CAATGACTCTGGAGAAACAG+AGG | 0.661940 | 1_4:+48662055 | None:intergenic |
TGGTATATATGTTATCACCA+GGG | 0.665799 | 1_4:-48669794 | Msa0167010:CDS |
GTGCTATTAATGTTTGTCAG+CGG | 0.670687 | 1_4:-48662873 | Msa0167010:CDS |
GTGCTATTAATGTTTGTCAG+CGG | 0.670687 | 1_4:-48669160 | Msa0167010:CDS |
ACAGTTGAAACAGAAGCAGT+CGG | 0.677484 | 1_4:-48668422 | Msa0167010:CDS |
GGTATCACCGGATAAGACCA+CGG | 0.680385 | 1_4:-48662555 | Msa0167010:CDS |
GGTATCACCGGATAAGACCA+CGG | 0.680385 | 1_4:-48668804 | Msa0167010:CDS |
GAGATTATAGAAATTCAGGA+AGG | 0.686775 | 1_4:-48661564 | Msa0167010:CDS |
GTGTTGCCTGACGAGGCCCA+GGG | 0.687330 | 1_4:-48669290 | Msa0167010:CDS |
TCGGAAACTAGAAGAAGTGG+GGG | 0.688243 | 1_4:+48671080 | None:intergenic |
TCTTCTGTAAAATCTCCACA+AGG | 0.702540 | 1_4:-48662122 | Msa0167010:CDS |
TCTTCTGTAAAATCTCCACA+AGG | 0.702540 | 1_4:-48668371 | Msa0167010:CDS |
GGTAGTGGCGAAAATAGACA+TGG | 0.702887 | 1_4:-48662907 | Msa0167010:CDS |
GGTAGTGGCGAAAATAGACA+TGG | 0.702887 | 1_4:-48669194 | Msa0167010:CDS |
TTGCGCCAAAACTCTAAGCG+AGG | 0.703796 | 1_4:+48661793 | None:intergenic |
TTGCGCCAAAACTCTAAGCG+AGG | 0.703796 | 1_4:+48668042 | None:intergenic |
AGCCTCAAAGGAGATGAGTG+GGG | 0.721063 | 1_4:-48662944 | Msa0167010:CDS |
AGCCTCAAAGGAGATGAGTG+GGG | 0.721063 | 1_4:-48669231 | Msa0167010:CDS |
CAAATGGTATATGATTAACA+GGG | 0.740844 | 1_4:-48661229 | Msa0167010:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAATATTTGTAGA+AGG | + | chr1_4:48661748-48661767 | None:intergenic | 10.0% |
!! | ATTATTAAAACAAAACAATA+AGG | + | chr1_4:48661804-48661823 | None:intergenic | 10.0% |
!!! | ATTTCAAAGAATTTTTTATA+TGG | - | chr1_4:48662604-48662623 | Msa0167010:intron | 10.0% |
!! | AAATAATAGTTAAAGTTAAA+AGG | - | chr1_4:48666251-48666270 | Msa0167010:intron | 10.0% |
!!! | TTTTCTAAGATATAATAAAA+AGG | + | chr1_4:48667036-48667055 | None:intergenic | 10.0% |
!! | AAATAAAAAATATTTGTAGA+AGG | + | chr1_4:48668036-48668055 | None:intergenic | 10.0% |
!! | ATTATTAAAACAAAACAATA+AGG | + | chr1_4:48661804-48661823 | None:intergenic | 10.0% |
!!! | ATTTCAAAGAATTTTTTATA+TGG | - | chr1_4:48662604-48662623 | Msa0167010:intron | 10.0% |
!!! | TAAAATTATCATTTTTGAGT+CGG | - | chr1_4:48661526-48661545 | Msa0167010:three_prime_UTR | 15.0% |
!! | AAGTAAAAAAAAAAATTGCA+AGG | + | chr1_4:48661776-48661795 | None:intergenic | 15.0% |
!!! | GCAATTTTTTTTTTTACTTT+TGG | - | chr1_4:48661777-48661796 | Msa0167010:CDS | 15.0% |
!! | AATAAATCCTAGATATAAAA+TGG | + | chr1_4:48664256-48664275 | None:intergenic | 15.0% |
!!! | TATTTTAAATAAGAATGACT+TGG | - | chr1_4:48665665-48665684 | Msa0167010:intron | 15.0% |
!!! | AAAGAAGTACTAATTAAAAT+TGG | - | chr1_4:48666313-48666332 | Msa0167010:intron | 15.0% |
!!! | TGTTTTGTCAAAAATTAATA+TGG | - | chr1_4:48666426-48666445 | Msa0167010:intron | 15.0% |
!!! | GTTTTGTCAAAAATTAATAT+GGG | - | chr1_4:48666427-48666446 | Msa0167010:intron | 15.0% |
!!! | TTGATAGTTATAAAAATAGT+TGG | + | chr1_4:48666475-48666494 | None:intergenic | 15.0% |
!! | AATTTCAAGAAAAAAATTGT+CGG | - | chr1_4:48666851-48666870 | Msa0167010:intron | 15.0% |
!! | TAATAAAAAGGCAAAAAAAA+CGG | + | chr1_4:48667024-48667043 | None:intergenic | 15.0% |
!!! | TAAAATTATCATTTTTGAGT+CGG | - | chr1_4:48661526-48661545 | Msa0167010:three_prime_UTR | 15.0% |
!! | GTAAAAAAAAAAAAATTGCA+AGG | + | chr1_4:48668063-48668082 | None:intergenic | 15.0% |
!! | AATAAATCCTAGATATAAAA+TGG | + | chr1_4:48664256-48664275 | None:intergenic | 15.0% |
!!! | TTTTTTTTCTTTTCCTTTCT+AGG | - | chr1_4:48661198-48661217 | Msa0167010:three_prime_UTR | 20.0% |
!! | AAAAAGAAAAATTGTTAAGC+AGG | + | chr1_4:48661643-48661662 | None:intergenic | 20.0% |
!! | ATACTTTATGTTGTAAATCA+GGG | - | chr1_4:48662293-48662312 | Msa0167010:CDS | 20.0% |
!!! | ACATCATATCTTTTGATAAT+AGG | + | chr1_4:48662348-48662367 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTGCCTACTTTA+TGG | - | chr1_4:48662577-48662596 | Msa0167010:CDS | 20.0% |
!!! | GGTTTAATATTTTTTCTCTT+AGG | + | chr1_4:48663788-48663807 | None:intergenic | 20.0% |
!!! | TTATGTTTGGTTTATTTTGT+AGG | - | chr1_4:48664105-48664124 | Msa0167010:intron | 20.0% |
!! | TCAAACACCTATTTATAATA+TGG | - | chr1_4:48664164-48664183 | Msa0167010:intron | 20.0% |
!! | TCACATACCATATTATAAAT+AGG | + | chr1_4:48664174-48664193 | None:intergenic | 20.0% |
!! | ATGCATATGATATCTAATAA+TGG | + | chr1_4:48664232-48664251 | None:intergenic | 20.0% |
!!! | TAGGATTTATTTTCTCTTTA+AGG | - | chr1_4:48664265-48664284 | Msa0167010:intron | 20.0% |
!!! | ACAATCTATAATCTTTTAAC+TGG | - | chr1_4:48664319-48664338 | Msa0167010:intron | 20.0% |
!!! | AACTTTAGTTTTGATAGAAA+AGG | + | chr1_4:48665145-48665164 | None:intergenic | 20.0% |
!! | CAATACATATTCATCATTAT+TGG | + | chr1_4:48665402-48665421 | None:intergenic | 20.0% |
!! | CAATAATGATGAATATGTAT+TGG | - | chr1_4:48665400-48665419 | Msa0167010:intron | 20.0% |
!!! | TCTTTTTTAAAACCCTAAAT+TGG | - | chr1_4:48666002-48666021 | Msa0167010:intron | 20.0% |
!! | CAACTATTATCTCAAAATAA+AGG | + | chr1_4:48666159-48666178 | None:intergenic | 20.0% |
!!! | CTTTATTTTGAGATAATAGT+TGG | - | chr1_4:48666157-48666176 | Msa0167010:intron | 20.0% |
!!! | TACTTTTTTGAAAAGATCAT+AGG | - | chr1_4:48666383-48666402 | Msa0167010:intron | 20.0% |
!! | TCATAGGAGAAATATTAATA+CGG | - | chr1_4:48666399-48666418 | Msa0167010:intron | 20.0% |
!!! | AAATTAAAGCGTTCTTAAAA+AGG | - | chr1_4:48666574-48666593 | Msa0167010:intron | 20.0% |
!! | ATTTCAAGAAAAAAATTGTC+GGG | - | chr1_4:48666852-48666871 | Msa0167010:intron | 20.0% |
!! | GAAATTAAGGAAATTAATCA+GGG | + | chr1_4:48667107-48667126 | None:intergenic | 20.0% |
!!! | TTTTTTTTCTTTTCCTTTCT+AGG | - | chr1_4:48661198-48661217 | Msa0167010:three_prime_UTR | 20.0% |
!!! | TTTTAAGTTAGATGAAAACT+TGG | - | chr1_4:48667734-48667753 | Msa0167010:intron | 20.0% |
!! | AAAAAGAAAAATTGTTAAGC+AGG | + | chr1_4:48661643-48661662 | None:intergenic | 20.0% |
!! | ATACTTTATGTTGTAAATCA+GGG | - | chr1_4:48662293-48662312 | Msa0167010:CDS | 20.0% |
!!! | ACATCATATCTTTTGATAAT+AGG | + | chr1_4:48662348-48662367 | None:intergenic | 20.0% |
!!! | GGTTTAATATTTTTTCTCTT+AGG | + | chr1_4:48663788-48663807 | None:intergenic | 20.0% |
!! | ATATACAAAAATGCTAACAA+TGG | + | chr1_4:48670299-48670318 | None:intergenic | 20.0% |
!!! | ATTGTTAGCATTTTTGTATA+TGG | - | chr1_4:48670298-48670317 | Msa0167010:intron | 20.0% |
!! | TCAAACACCTATTTATAATA+TGG | - | chr1_4:48664164-48664183 | Msa0167010:intron | 20.0% |
!! | TCACATACCATATTATAAAT+AGG | + | chr1_4:48664174-48664193 | None:intergenic | 20.0% |
!! | ATGCATATGATATCTAATAA+TGG | + | chr1_4:48664232-48664251 | None:intergenic | 20.0% |
!!! | TAGGATTTATTTTCTCTTTA+AGG | - | chr1_4:48664265-48664284 | Msa0167010:intron | 20.0% |
!!! | ATTTATTTTCTCTTTAAGGT+GGG | - | chr1_4:48670518-48670537 | Msa0167010:intron | 20.0% |
!!! | ACAATCTATAATCTTTTAAC+TGG | - | chr1_4:48664319-48664338 | Msa0167010:intron | 20.0% |
! | TGATAGAGATAAGAATAAGA+AGG | + | chr1_4:48661166-48661185 | None:intergenic | 25.0% |
!!! | TTTTAAGTTAGATGAAAACC+TGG | - | chr1_4:48661445-48661464 | Msa0167010:intron | 25.0% |
!!! | TTTTTTACCATGTTTGACAA+TGG | - | chr1_4:48661661-48661680 | Msa0167010:intron | 25.0% |
!! | TATTTTACCATTGTCAAACA+TGG | + | chr1_4:48661671-48661690 | None:intergenic | 25.0% |
! | ATAAAGCTTCAATATGCAAA+CGG | - | chr1_4:48661688-48661707 | Msa0167010:intron | 25.0% |
! | AGGACTAAAATGAATATTAG+AGG | - | chr1_4:48661875-48661894 | Msa0167010:intron | 25.0% |
! | GGACTAAAATGAATATTAGA+GGG | - | chr1_4:48661876-48661895 | Msa0167010:intron | 25.0% |
! | AAATCTGTTCATATTGAAGT+TGG | + | chr1_4:48661903-48661922 | None:intergenic | 25.0% |
! | ACTAGCATTTATACATGAAA+AGG | + | chr1_4:48662183-48662202 | None:intergenic | 25.0% |
! | CATACTTTATGTTGTAAATC+AGG | - | chr1_4:48662292-48662311 | Msa0167010:CDS | 25.0% |
!!! | ATATCTTTTGATAATAGGAG+TGG | + | chr1_4:48662343-48662362 | None:intergenic | 25.0% |
! | AAACTCAACGTCATAAAATA+AGG | + | chr1_4:48662532-48662551 | None:intergenic | 25.0% |
! | TTGAAATCTAACCATAAAGT+AGG | + | chr1_4:48662591-48662610 | None:intergenic | 25.0% |
!!! | TTGTTTGATGGTAAGTATTT+TGG | - | chr1_4:48662742-48662761 | Msa0167010:CDS | 25.0% |
! | AGGTTGTTATAAGAGAAAAA+GGG | - | chr1_4:48663736-48663755 | Msa0167010:intron | 25.0% |
! | ATATACAAAAATGCTAACAG+TGG | + | chr1_4:48664050-48664069 | None:intergenic | 25.0% |
!! | ACTGTTAGCATTTTTGTATA+TGG | - | chr1_4:48664049-48664068 | Msa0167010:intron | 25.0% |
! | AAAGAATAGAGTGAAGTAAA+TGG | + | chr1_4:48664087-48664106 | None:intergenic | 25.0% |
! | TTCACTCTATTCTTTATGTT+TGG | - | chr1_4:48664092-48664111 | Msa0167010:intron | 25.0% |
!! | ATGCATACCATTTTATATCT+AGG | - | chr1_4:48664246-48664265 | Msa0167010:intron | 25.0% |
!!! | GATTTATTTTCTCTTTAAGG+CGG | - | chr1_4:48664268-48664287 | Msa0167010:intron | 25.0% |
!!! | ATTTATTTTCTCTTTAAGGC+GGG | - | chr1_4:48664269-48664288 | Msa0167010:intron | 25.0% |
!! | TCTTTTATATCACCTTTTAG+AGG | - | chr1_4:48664399-48664418 | Msa0167010:intron | 25.0% |
!! | TTTTTATCAGAACTATCATG+TGG | - | chr1_4:48664483-48664502 | Msa0167010:intron | 25.0% |
! | TCATATACCATTTGTATGTT+CGG | + | chr1_4:48664701-48664720 | None:intergenic | 25.0% |
! | CAAATGGTATATGATTAACA+TGG | - | chr1_4:48664707-48664726 | Msa0167010:intron | 25.0% |
! | AGTGTAATTTATCTAACCAA+GGG | + | chr1_4:48664897-48664916 | None:intergenic | 25.0% |
! | ATAATAGCAATATACAGATC+AGG | + | chr1_4:48664946-48664965 | None:intergenic | 25.0% |
!!! | CTGCATTATTAACTTTTTCT+GGG | + | chr1_4:48665007-48665026 | None:intergenic | 25.0% |
!!! | ACTGCATTATTAACTTTTTC+TGG | + | chr1_4:48665008-48665027 | None:intergenic | 25.0% |
! | GAACTAAGATAAAACTTAAG+AGG | - | chr1_4:48665031-48665050 | Msa0167010:intron | 25.0% |
! | TAAGATAAAACTTAAGAGGT+AGG | - | chr1_4:48665035-48665054 | Msa0167010:intron | 25.0% |
! | ATAGTTGATTGTGCATTAAA+TGG | + | chr1_4:48665098-48665117 | None:intergenic | 25.0% |
!!! | CAAAAGAAAACTTGTTAAAC+CGG | + | chr1_4:48665250-48665269 | None:intergenic | 25.0% |
!! | TATTTAAAATAGCAGTAGCT+TGG | + | chr1_4:48665656-48665675 | None:intergenic | 25.0% |
!!! | TAGCTTTTTTCTTTTTTGAG+AGG | + | chr1_4:48665861-48665880 | None:intergenic | 25.0% |
!! | TAGGCTTTAATACCAATTTA+GGG | + | chr1_4:48666017-48666036 | None:intergenic | 25.0% |
!! | ATAGGCTTTAATACCAATTT+AGG | + | chr1_4:48666018-48666037 | None:intergenic | 25.0% |
!!! | GTATTAAAGCCTATTGATTT+AGG | - | chr1_4:48666024-48666043 | Msa0167010:intron | 25.0% |
! | TATCATTGACATAAGAATGT+TGG | + | chr1_4:48666291-48666310 | None:intergenic | 25.0% |
! | CATAGGAGAAATATTAATAC+GGG | - | chr1_4:48666400-48666419 | Msa0167010:intron | 25.0% |
! | GGAAATTAAGGAAATTAATC+AGG | + | chr1_4:48667108-48667127 | None:intergenic | 25.0% |
! | NNAAATCAGAGAGGAAATTA+AGG | + | chr1_4:48667120-48667139 | None:intergenic | 25.0% |
! | TGATAGAGATAAGAATAAGA+AGG | + | chr1_4:48661166-48661185 | None:intergenic | 25.0% |
!!! | TTTTTTACCATGTTTGACAA+TGG | - | chr1_4:48661661-48661680 | Msa0167010:intron | 25.0% |
!! | TATTTTACCATTGTCAAACA+TGG | + | chr1_4:48661671-48661690 | None:intergenic | 25.0% |
! | ATAAAGCTTCAATATGCAAA+CGG | - | chr1_4:48661688-48661707 | Msa0167010:intron | 25.0% |
! | AGGACTAAAATGAATATTAG+AGG | - | chr1_4:48661875-48661894 | Msa0167010:intron | 25.0% |
! | GGACTAAAATGAATATTAGA+GGG | - | chr1_4:48661876-48661895 | Msa0167010:intron | 25.0% |
! | AAATCTGTTCATATTGAAGT+TGG | + | chr1_4:48661903-48661922 | None:intergenic | 25.0% |
! | ACTAGCATTTATACATGAAA+AGG | + | chr1_4:48662183-48662202 | None:intergenic | 25.0% |
! | CATACTTTATGTTGTAAATC+AGG | - | chr1_4:48662292-48662311 | Msa0167010:CDS | 25.0% |
!!! | ATATCTTTTGATAATAGGAG+TGG | + | chr1_4:48662343-48662362 | None:intergenic | 25.0% |
! | AGTGATAACATATATACCAT+CGG | + | chr1_4:48668677-48668696 | None:intergenic | 25.0% |
! | ATGGTATATATGTTATCACT+AGG | - | chr1_4:48668677-48668696 | Msa0167010:CDS | 25.0% |
! | TGGTATATATGTTATCACTA+GGG | - | chr1_4:48668678-48668697 | Msa0167010:CDS | 25.0% |
! | AAACTCAACGTCATAAAATA+AGG | + | chr1_4:48662532-48662551 | None:intergenic | 25.0% |
!!! | TGTTTTTTTTGCCTACTTTA+TGG | - | chr1_4:48668864-48668883 | Msa0167010:intron | 25.0% |
! | TTGAAATCTAACCATAAAGT+AGG | + | chr1_4:48662591-48662610 | None:intergenic | 25.0% |
!!! | TTGTTTGATGGTAAGTATTT+TGG | - | chr1_4:48662742-48662761 | Msa0167010:CDS | 25.0% |
! | AGGTTGTTATAAGAGAAAAA+GGG | - | chr1_4:48663736-48663755 | Msa0167010:intron | 25.0% |
! | AAAGAATAGAGTGAAGTAAA+TGG | + | chr1_4:48664087-48664106 | None:intergenic | 25.0% |
! | TTCACTCTATTCTTTATGTT+TGG | - | chr1_4:48664092-48664111 | Msa0167010:intron | 25.0% |
! | TCACTCTATTCTTTATGTTT+GGG | - | chr1_4:48664093-48664112 | Msa0167010:intron | 25.0% |
!!! | TTATGTTTGGGTTATTTTGT+AGG | - | chr1_4:48670354-48670373 | Msa0167010:intron | 25.0% |
!! | ATGCATACCATTTTATATCT+AGG | - | chr1_4:48664246-48664265 | Msa0167010:intron | 25.0% |
!!! | GATTTATTTTCTCTTTAAGG+TGG | - | chr1_4:48664268-48664287 | Msa0167010:intron | 25.0% |
!! | TCTTTTATATCACCTTTTAG+AGG | - | chr1_4:48664399-48664418 | Msa0167010:intron | 25.0% |
!! | TTTTTATCAGAACTATCATG+TGG | - | chr1_4:48664483-48664502 | Msa0167010:intron | 25.0% |
! | TCATATACCATTTGTATGTT+CGG | + | chr1_4:48664701-48664720 | None:intergenic | 25.0% |
! | ACAAATGGTATATGATTAAC+AGG | - | chr1_4:48664706-48664725 | Msa0167010:intron | 25.0% |
! | CAAATGGTATATGATTAACA+GGG | - | chr1_4:48664707-48664726 | Msa0167010:intron | 25.0% |
TCGTATAAAGTAACCTAGAA+AGG | + | chr1_4:48661214-48661233 | None:intergenic | 30.0% | |
! | TCTAGGTTACTTTATACGAT+TGG | - | chr1_4:48661215-48661234 | Msa0167010:three_prime_UTR | 30.0% |
TAGCTCATGTCTAAATTGTT+AGG | - | chr1_4:48661350-48661369 | Msa0167010:three_prime_UTR | 30.0% | |
GATTTGTGTCTCTCAAAATA+AGG | - | chr1_4:48661855-48661874 | Msa0167010:intron | 30.0% | |
! | CAATATGAACAGATTTTGCA+AGG | - | chr1_4:48661907-48661926 | Msa0167010:intron | 30.0% |
CTCTCAATTACTATCATAAG+AGG | - | chr1_4:48662248-48662267 | Msa0167010:CDS | 30.0% | |
GGTGATAACATATATACCAT+CGG | + | chr1_4:48662388-48662407 | None:intergenic | 30.0% | |
ATGGTATATATGTTATCACC+AGG | - | chr1_4:48662388-48662407 | Msa0167010:CDS | 30.0% | |
TGGTATATATGTTATCACCA+GGG | - | chr1_4:48662389-48662408 | Msa0167010:CDS | 30.0% | |
ATAAGTGTCAATGTCTTTCA+TGG | - | chr1_4:48662469-48662488 | Msa0167010:CDS | 30.0% | |
! | ATCTGAAGCTGATATTGATT+CGG | - | chr1_4:48662675-48662694 | Msa0167010:intron | 30.0% |
TTACCATCAAACAAGATTTC+TGG | + | chr1_4:48662736-48662755 | None:intergenic | 30.0% | |
!! | GTCAAAACATTTCTAAGACA+TGG | + | chr1_4:48662791-48662810 | None:intergenic | 30.0% |
!!! | TTGGTTTTAATTGTTGTTGC+AGG | - | chr1_4:48662842-48662861 | Msa0167010:CDS | 30.0% |
AAATTTCATTCCTACTTCGT+TGG | - | chr1_4:48662871-48662890 | Msa0167010:CDS | 30.0% | |
!!! | GTAGAGCTCTGTTTTTTATT+TGG | + | chr1_4:48663085-48663104 | None:intergenic | 30.0% |
TTACCATCAGATGATATTTC+TGG | + | chr1_4:48663172-48663191 | None:intergenic | 30.0% | |
AGAGTTTAACATTATGCAAC+CGG | + | chr1_4:48663505-48663524 | None:intergenic | 30.0% | |
GAATAGTAAACACATTGTCT+GGG | - | chr1_4:48663657-48663676 | Msa0167010:intron | 30.0% | |
!!! | TGAAAAAGTTTTGGGAATTC+TGG | + | chr1_4:48663705-48663724 | None:intergenic | 30.0% |
GAGGTTGTTATAAGAGAAAA+AGG | - | chr1_4:48663735-48663754 | Msa0167010:intron | 30.0% | |
CTTCATGAATTGACAATGAT+TGG | + | chr1_4:48663936-48663955 | None:intergenic | 30.0% | |
CAATCATTGTCAATTCATGA+AGG | - | chr1_4:48663934-48663953 | Msa0167010:intron | 30.0% | |
!!! | GTTTGGTTTATTTTGTAGGA+AGG | - | chr1_4:48664109-48664128 | Msa0167010:intron | 30.0% |
TGGTATGTGATATCTTCATT+TGG | - | chr1_4:48664184-48664203 | Msa0167010:intron | 30.0% | |
!!! | TTTATTTTCTCTTTAAGGCG+GGG | - | chr1_4:48664270-48664289 | Msa0167010:intron | 30.0% |
GAGATTATAGAAATTCAGGA+AGG | - | chr1_4:48664372-48664391 | Msa0167010:intron | 30.0% | |
AAGGTTAGAGAGAATTAGTT+AGG | + | chr1_4:48664552-48664571 | None:intergenic | 30.0% | |
!!! | TTTTTTACAGACCTGTAACA+AGG | + | chr1_4:48664571-48664590 | None:intergenic | 30.0% |
TGCAAGGGAGATAATTAATT+AGG | - | chr1_4:48664664-48664683 | Msa0167010:intron | 30.0% | |
GCAAGGGAGATAATTAATTA+GGG | - | chr1_4:48664665-48664684 | Msa0167010:intron | 30.0% | |
ATTACAACCGAACATACAAA+TGG | - | chr1_4:48664691-48664710 | Msa0167010:intron | 30.0% | |
CTAGGTGTATGTAAGAAAAA+TGG | - | chr1_4:48664766-48664785 | Msa0167010:intron | 30.0% | |
GAACAAAACACAAGATAGAA+AGG | + | chr1_4:48664833-48664852 | None:intergenic | 30.0% | |
!! | TGTTTTGTTCTTGATTCTAG+AGG | - | chr1_4:48664843-48664862 | Msa0167010:intron | 30.0% |
GAGTGTAATTTATCTAACCA+AGG | + | chr1_4:48664898-48664917 | None:intergenic | 30.0% | |
!! | CAGTTTTATGAAGACACTAT+TGG | + | chr1_4:48665069-48665088 | None:intergenic | 30.0% |
AAAAAGAAAATAGTTGCAGC+TGG | - | chr1_4:48665171-48665190 | Msa0167010:intron | 30.0% | |
! | CGGTTTAACAAGTTTTCTTT+TGG | - | chr1_4:48665248-48665267 | Msa0167010:intron | 30.0% |
ATTGGGATCATCTAATTCTA+AGG | - | chr1_4:48665437-48665456 | Msa0167010:intron | 30.0% | |
TGTCTATCATGTTTAATGTG+AGG | + | chr1_4:48665587-48665606 | None:intergenic | 30.0% | |
!! | TAAATAAGAATGACTTGGTG+TGG | - | chr1_4:48665670-48665689 | Msa0167010:intron | 30.0% |
ACTGAGACAAAGAAGAAAAA+TGG | - | chr1_4:48666661-48666680 | Msa0167010:intron | 30.0% | |
ATTGATGTACAGTCCTTAAT+TGG | + | chr1_4:48666804-48666823 | None:intergenic | 30.0% | |
CATGCAACATAAACATCAAA+TGG | - | chr1_4:48666901-48666920 | Msa0167010:intron | 30.0% | |
ATAAACATCAAATGGATCTG+TGG | - | chr1_4:48666909-48666928 | Msa0167010:intron | 30.0% | |
ACGGAAAAAGGCAAAAAAAA+AGG | + | chr1_4:48667005-48667024 | None:intergenic | 30.0% | |
AAGGCAAAAAAAACGGAAAA+AGG | + | chr1_4:48667017-48667036 | None:intergenic | 30.0% | |
TCAAGGGAGATTGATTATTT+GGG | + | chr1_4:48667084-48667103 | None:intergenic | 30.0% | |
!!! | CTGACTTTTTTGACTTATGT+TGG | + | chr1_4:48667279-48667298 | None:intergenic | 30.0% |
CAACATAAGTCAAAAAAGTC+AGG | - | chr1_4:48667277-48667296 | Msa0167010:intron | 30.0% | |
TCGTATAAAGTAACCTAGAA+AGG | + | chr1_4:48661214-48661233 | None:intergenic | 30.0% | |
! | TCTAGGTTACTTTATACGAT+TGG | - | chr1_4:48661215-48661234 | Msa0167010:three_prime_UTR | 30.0% |
TAGCTCATGTCTAAATTGTT+AGG | - | chr1_4:48661350-48661369 | Msa0167010:three_prime_UTR | 30.0% | |
! | CAATATGAACAGATTTTGCA+AGG | - | chr1_4:48661907-48661926 | Msa0167010:intron | 30.0% |
!! | AATTTAGCACCGTTTGATTT+TGG | + | chr1_4:48668243-48668262 | None:intergenic | 30.0% |
CTCTCAATTACTATCATAAG+AGG | - | chr1_4:48662248-48662267 | Msa0167010:CDS | 30.0% | |
GGTATATATGTTATCACTAG+GGG | - | chr1_4:48668679-48668698 | Msa0167010:CDS | 30.0% | |
! | ATCTGAAGCTGATATTGATT+CGG | - | chr1_4:48662675-48662694 | Msa0167010:intron | 30.0% |
! | TGTCAAGAAATCTTGTTTGA+TGG | - | chr1_4:48669017-48669036 | Msa0167010:intron | 30.0% |
!! | GTCAAAACATTTCTAAGACA+TGG | + | chr1_4:48662791-48662810 | None:intergenic | 30.0% |
!!! | TTGGTTTTAATTGTTGTTGC+AGG | - | chr1_4:48662842-48662861 | Msa0167010:CDS | 30.0% |
AAATTTCATTCCTACTTCGT+TGG | - | chr1_4:48662871-48662890 | Msa0167010:CDS | 30.0% | |
!!! | GTAGAGCTCTGTTTTTTATT+TGG | + | chr1_4:48663085-48663104 | None:intergenic | 30.0% |
TTACCATCAGATGATATTTC+TGG | + | chr1_4:48663172-48663191 | None:intergenic | 30.0% | |
AGAGTTTAACATTATGCAAC+CGG | + | chr1_4:48663505-48663524 | None:intergenic | 30.0% | |
GAATAGTAAACACATTGTCT+GGG | - | chr1_4:48663657-48663676 | Msa0167010:intron | 30.0% | |
!!! | TGAAAAAGTTTTGGGAATTC+TGG | + | chr1_4:48663705-48663724 | None:intergenic | 30.0% |
GAGGTTGTTATAAGAGAAAA+AGG | - | chr1_4:48663735-48663754 | Msa0167010:intron | 30.0% | |
CTTCATGAATTGACAATGAT+TGG | + | chr1_4:48663936-48663955 | None:intergenic | 30.0% | |
CAATCATTGTCAATTCATGA+AGG | - | chr1_4:48663934-48663953 | Msa0167010:intron | 30.0% | |
AAAATGCTAACAATGGCATT+GGG | + | chr1_4:48670292-48670311 | None:intergenic | 30.0% | |
AAAAATGCTAACAATGGCAT+TGG | + | chr1_4:48670293-48670312 | None:intergenic | 30.0% | |
GAGATTATAGAAATTCAGGA+AGG | - | chr1_4:48664372-48664391 | Msa0167010:intron | 30.0% | |
AAGGTTAGAGAGAATTAGTT+AGG | + | chr1_4:48664552-48664571 | None:intergenic | 30.0% | |
!!! | TTTTTTACAGACCTGTAACA+AGG | + | chr1_4:48664571-48664590 | None:intergenic | 30.0% |
TGCAAGGGAGATAATTAATT+AGG | - | chr1_4:48664664-48664683 | Msa0167010:intron | 30.0% | |
GCAAGGGAGATAATTAATTA+GGG | - | chr1_4:48664665-48664684 | Msa0167010:intron | 30.0% | |
ATTACAACCGAACATACAAA+TGG | - | chr1_4:48664691-48664710 | Msa0167010:intron | 30.0% | |
CTAGGTGTATGTAAGAAAAA+TGG | - | chr1_4:48664766-48664785 | Msa0167010:intron | 30.0% | |
GAACAAAACACAAGATAGAA+AGG | + | chr1_4:48664833-48664852 | None:intergenic | 30.0% | |
!! | TGTTTTGTTCTTGATTCTAG+AGG | - | chr1_4:48664843-48664862 | Msa0167010:intron | 30.0% |
ATAAGAAGGATGAGAGTGAA+GGG | + | chr1_4:48661152-48661171 | None:intergenic | 35.0% | |
AATAAGAAGGATGAGAGTGA+AGG | + | chr1_4:48661153-48661172 | None:intergenic | 35.0% | |
! | AGGTTACTTTATACGATTGG+TGG | - | chr1_4:48661218-48661237 | Msa0167010:three_prime_UTR | 35.0% |
AAGTGAAAACCCTTACTTTC+TGG | + | chr1_4:48661293-48661312 | None:intergenic | 35.0% | |
ACAATGCATTGCAATATGCA+GGG | - | chr1_4:48661572-48661591 | Msa0167010:CDS | 35.0% | |
AAGTGAATAAGTGGAGAATC+CGG | + | chr1_4:48661613-48661632 | None:intergenic | 35.0% | |
GGCAACTTAAAGTGAATAAG+TGG | + | chr1_4:48661622-48661641 | None:intergenic | 35.0% | |
!! | AATTTAGCCCCGTTTGATTT+TGG | + | chr1_4:48661954-48661973 | None:intergenic | 35.0% |
ACTAACAGTTAGCAGTTTGT+TGG | - | chr1_4:48662102-48662121 | Msa0167010:CDS | 35.0% | |
GGTATATATGTTATCACCAG+GGG | - | chr1_4:48662390-48662409 | Msa0167010:CDS | 35.0% | |
CACTTATTACAACAAACCTG+AGG | + | chr1_4:48662456-48662475 | None:intergenic | 35.0% | |
! | TATATGGTTTTCCTCCAAAC+TGG | - | chr1_4:48662620-48662639 | Msa0167010:intron | 35.0% |
! | ATATGGTTTTCCTCCAAACT+GGG | - | chr1_4:48662621-48662640 | Msa0167010:intron | 35.0% |
CAAATTGCAGATACACTATC+CGG | + | chr1_4:48662712-48662731 | None:intergenic | 35.0% | |
! | TGTCCAGAAATCTTGTTTGA+TGG | - | chr1_4:48662730-48662749 | Msa0167010:intron | 35.0% |
AGTCTCGATATATAAGTCGT+TGG | - | chr1_4:48662823-48662842 | Msa0167010:CDS | 35.0% | |
! | TTTAATTGTTGTTGCAGGTG+AGG | - | chr1_4:48662847-48662866 | Msa0167010:CDS | 35.0% |
GGAAAATGCAAGAAACCATT+CGG | - | chr1_4:48662914-48662933 | Msa0167010:CDS | 35.0% | |
! | TTGCATTCTTTTGTACCGAA+TGG | + | chr1_4:48662932-48662951 | None:intergenic | 35.0% |
AAAAGAATGCAAAGCCTCAA+AGG | - | chr1_4:48662940-48662959 | Msa0167010:CDS | 35.0% | |
! | GTTGATGTTACTTATGGTAG+TGG | - | chr1_4:48662974-48662993 | Msa0167010:CDS | 35.0% |
AACATTAATAGCACGTAACC+TGG | + | chr1_4:48663017-48663036 | None:intergenic | 35.0% | |
! | GTGCTATTAATGTTTGTCAG+CGG | - | chr1_4:48663023-48663042 | Msa0167010:CDS | 35.0% |
CATCCAGAAATATCATCTGA+TGG | - | chr1_4:48663166-48663185 | Msa0167010:intron | 35.0% | |
! | GAAGTCTTTTCCTACTTCTT+TGG | - | chr1_4:48663358-48663377 | Msa0167010:intron | 35.0% |
GAGTTTAACATTATGCAACC+GGG | + | chr1_4:48663504-48663523 | None:intergenic | 35.0% | |
! | ATTCCCTTTTGTGACTGAAT+GGG | + | chr1_4:48663641-48663660 | None:intergenic | 35.0% |
! | TATTCCCTTTTGTGACTGAA+TGG | + | chr1_4:48663642-48663661 | None:intergenic | 35.0% |
GGAATAGTAAACACATTGTC+TGG | - | chr1_4:48663656-48663675 | Msa0167010:intron | 35.0% | |
! | GTCTTCGCTGAAAAAGTTTT+GGG | + | chr1_4:48663713-48663732 | None:intergenic | 35.0% |
! | AGTCTTCGCTGAAAAAGTTT+TGG | + | chr1_4:48663714-48663733 | None:intergenic | 35.0% |
!!! | AAAACTTTTTCAGCGAAGAC+TGG | - | chr1_4:48663713-48663732 | Msa0167010:intron | 35.0% |
! | TGGAGATTTTACAGAAGATG+CGG | + | chr1_4:48663810-48663829 | None:intergenic | 35.0% |
TCTTCTGTAAAATCTCCACA+AGG | - | chr1_4:48663812-48663831 | Msa0167010:intron | 35.0% | |
TGTAAAATCTCCACAAGGAA+GGG | - | chr1_4:48663817-48663836 | Msa0167010:intron | 35.0% | |
GGTCTCAAAAAATCAAGATC+TGG | - | chr1_4:48663902-48663921 | Msa0167010:intron | 35.0% | |
AAAATGCTAACAGTGGCATT+GGG | + | chr1_4:48664043-48664062 | None:intergenic | 35.0% | |
AAAAATGCTAACAGTGGCAT+TGG | + | chr1_4:48664044-48664063 | None:intergenic | 35.0% | |
!!! | TGGTTTATTTTGTAGGAAGG+TGG | - | chr1_4:48664112-48664131 | Msa0167010:intron | 35.0% |
GATATCTAATAATGGCAGCT+GGG | + | chr1_4:48664224-48664243 | None:intergenic | 35.0% | |
TGATATCTAATAATGGCAGC+TGG | + | chr1_4:48664225-48664244 | None:intergenic | 35.0% | |
!!! | TTATTTTCTCTTTAAGGCGG+GGG | - | chr1_4:48664271-48664290 | Msa0167010:intron | 35.0% |
CCTGAATTTCTATAATCTCG+CGG | + | chr1_4:48664371-48664390 | None:intergenic | 35.0% | |
AATATATACCAGCCCAATGA+TGG | + | chr1_4:48664432-48664451 | None:intergenic | 35.0% | |
ATTCTCTCTAACCTTGTTAC+AGG | - | chr1_4:48664557-48664576 | Msa0167010:intron | 35.0% | |
ACAGGTCTGTAAAAAATGAG+CGG | - | chr1_4:48664575-48664594 | Msa0167010:intron | 35.0% | |
GATTAACATGGCAGAGATTT+AGG | - | chr1_4:48664719-48664738 | Msa0167010:intron | 35.0% | |
GATAAAACTTAAGAGGTAGG+AGG | - | chr1_4:48665038-48665057 | Msa0167010:intron | 35.0% | |
GTTGATTGTGCATTAAATGG+TGG | + | chr1_4:48665095-48665114 | None:intergenic | 35.0% | |
!! | ATTGTTGAGCTGATTTGTTC+TGG | - | chr1_4:48665329-48665348 | Msa0167010:intron | 35.0% |
!! | TTGTTGAGCTGATTTGTTCT+GGG | - | chr1_4:48665330-48665349 | Msa0167010:intron | 35.0% |
TTGGATGTAGCAAACAAGAT+TGG | - | chr1_4:48665419-48665438 | Msa0167010:intron | 35.0% | |
TGGATGTAGCAAACAAGATT+GGG | - | chr1_4:48665420-48665439 | Msa0167010:intron | 35.0% | |
TTAGCCAGTTCTATCATCTA+TGG | - | chr1_4:48665473-48665492 | Msa0167010:intron | 35.0% | |
ACAACCATAGATGATAGAAC+TGG | + | chr1_4:48665480-48665499 | None:intergenic | 35.0% | |
TCATCTATGGTTGTCATTGA+AGG | - | chr1_4:48665486-48665505 | Msa0167010:intron | 35.0% | |
TTGTCATTGAAGGAAACGTT+TGG | - | chr1_4:48665496-48665515 | Msa0167010:intron | 35.0% | |
TTGAAGGAAACGTTTGGAAA+AGG | - | chr1_4:48665502-48665521 | Msa0167010:intron | 35.0% | |
TGAAGGAAACGTTTGGAAAA+GGG | - | chr1_4:48665503-48665522 | Msa0167010:intron | 35.0% | |
TTAAAATAGCAGTAGCTTGG+TGG | + | chr1_4:48665653-48665672 | None:intergenic | 35.0% | |
! | CAACTAATTTGTGAATGCGT+TGG | - | chr1_4:48665732-48665751 | Msa0167010:intron | 35.0% |
TCCTTAATTGCTGAATGTGT+TGG | - | chr1_4:48665761-48665780 | Msa0167010:intron | 35.0% | |
TCCAACACATTCAGCAATTA+AGG | + | chr1_4:48665765-48665784 | None:intergenic | 35.0% | |
!! | AGGTTTGGTGCATGTATAAA+TGG | + | chr1_4:48666057-48666076 | None:intergenic | 35.0% |
TCAATACGCTTATCACTGTT+AGG | + | chr1_4:48666077-48666096 | None:intergenic | 35.0% | |
CGTTAAAAAGATACGACTCT+TGG | - | chr1_4:48666114-48666133 | Msa0167010:intron | 35.0% | |
ATGAAGACCGAATTAAAGAG+CGG | - | chr1_4:48666182-48666201 | Msa0167010:intron | 35.0% | |
CTTAAGACCGCTCTTTAATT+CGG | + | chr1_4:48666192-48666211 | None:intergenic | 35.0% | |
CTACGTAAAGCAAAAAATCG+AGG | - | chr1_4:48666626-48666645 | Msa0167010:intron | 35.0% | |
CAAGGGAGATTGATTATTTG+GGG | + | chr1_4:48667083-48667102 | None:intergenic | 35.0% | |
GTCAAGGGAGATTGATTATT+TGG | + | chr1_4:48667085-48667104 | None:intergenic | 35.0% | |
AGGAAATTAATCAGGGTCAA+GGG | + | chr1_4:48667100-48667119 | None:intergenic | 35.0% | |
AAGGAAATTAATCAGGGTCA+AGG | + | chr1_4:48667101-48667120 | None:intergenic | 35.0% | |
ATAAGAAGGATGAGAGTGAA+GGG | + | chr1_4:48661152-48661171 | None:intergenic | 35.0% | |
AATAAGAAGGATGAGAGTGA+AGG | + | chr1_4:48661153-48661172 | None:intergenic | 35.0% | |
! | AGGTTACTTTATACGATTGG+TGG | - | chr1_4:48661218-48661237 | Msa0167010:three_prime_UTR | 35.0% |
AAGTGAAAACCCTTACTTTC+TGG | + | chr1_4:48661293-48661312 | None:intergenic | 35.0% | |
GTTAGATGAAAACTTGGCTT+AGG | - | chr1_4:48667740-48667759 | Msa0167010:intron | 35.0% | |
ACAATGCATTGCAATATGCA+GGG | - | chr1_4:48661572-48661591 | Msa0167010:CDS | 35.0% | |
AAGTGAATAAGTGGAGAATC+CGG | + | chr1_4:48661613-48661632 | None:intergenic | 35.0% | |
GGCAACTTAAAGTGAATAAG+TGG | + | chr1_4:48661622-48661641 | None:intergenic | 35.0% | |
GATTTGTGTCTCTCAAAAGA+AGG | - | chr1_4:48668144-48668163 | Msa0167010:intron | 35.0% | |
ACTAACAGTTAGCAGTTTGT+TGG | - | chr1_4:48662102-48662121 | Msa0167010:CDS | 35.0% | |
CACTTATTACAACAAACCTG+AGG | + | chr1_4:48662456-48662475 | None:intergenic | 35.0% | |
ATAAGTGTCAATGTCTTTCG+TGG | - | chr1_4:48668758-48668777 | Msa0167010:CDS | 35.0% | |
! | TATATGGTTTTCCTCCAAAC+TGG | - | chr1_4:48662620-48662639 | Msa0167010:intron | 35.0% |
! | ATATGGTTTTCCTCCAAACT+GGG | - | chr1_4:48662621-48662640 | Msa0167010:intron | 35.0% |
CAAATTGCAGATACACTATC+CGG | + | chr1_4:48662712-48662731 | None:intergenic | 35.0% | |
AGTCTCGATATATAAGTCGT+TGG | - | chr1_4:48662823-48662842 | Msa0167010:CDS | 35.0% | |
! | TTTAATTGTTGTTGCAGGTG+AGG | - | chr1_4:48662847-48662866 | Msa0167010:CDS | 35.0% |
GGAAAATGCAAGAAACCATT+CGG | - | chr1_4:48662914-48662933 | Msa0167010:CDS | 35.0% | |
! | TTGCATTCTTTTGTACCGAA+TGG | + | chr1_4:48662932-48662951 | None:intergenic | 35.0% |
AAAAGAATGCAAAGCCTCAA+AGG | - | chr1_4:48662940-48662959 | Msa0167010:CDS | 35.0% | |
! | GTTGATGTTACTTATGGTAG+TGG | - | chr1_4:48662974-48662993 | Msa0167010:CDS | 35.0% |
AACATTAATAGCACGTAACC+TGG | + | chr1_4:48663017-48663036 | None:intergenic | 35.0% | |
! | GTGCTATTAATGTTTGTCAG+CGG | - | chr1_4:48663023-48663042 | Msa0167010:CDS | 35.0% |
CATCCAGAAATATCATCTGA+TGG | - | chr1_4:48663166-48663185 | Msa0167010:intron | 35.0% | |
! | GAAGTCTTTTCCTACTTCTT+TGG | - | chr1_4:48663358-48663377 | Msa0167010:intron | 35.0% |
GAGTTTAACATTATGCAACC+GGG | + | chr1_4:48663504-48663523 | None:intergenic | 35.0% | |
! | ATTCCCTTTTGTGACTGAAT+GGG | + | chr1_4:48663641-48663660 | None:intergenic | 35.0% |
! | TATTCCCTTTTGTGACTGAA+TGG | + | chr1_4:48663642-48663661 | None:intergenic | 35.0% |
GGAATAGTAAACACATTGTC+TGG | - | chr1_4:48663656-48663675 | Msa0167010:intron | 35.0% | |
! | GTCTTCGCTGAAAAAGTTTT+GGG | + | chr1_4:48663713-48663732 | None:intergenic | 35.0% |
! | AGTCTTCGCTGAAAAAGTTT+TGG | + | chr1_4:48663714-48663733 | None:intergenic | 35.0% |
!!! | AAAACTTTTTCAGCGAAGAC+TGG | - | chr1_4:48663713-48663732 | Msa0167010:intron | 35.0% |
! | TGGAGATTTTACAGAAGATG+CGG | + | chr1_4:48663810-48663829 | None:intergenic | 35.0% |
TCTTCTGTAAAATCTCCACA+AGG | - | chr1_4:48663812-48663831 | Msa0167010:intron | 35.0% | |
TGTAAAATCTCCACAAGGAA+GGG | - | chr1_4:48663817-48663836 | Msa0167010:intron | 35.0% | |
GGTCTCAAAAAATCAAGATC+TGG | - | chr1_4:48663902-48663921 | Msa0167010:intron | 35.0% | |
CATGAATGACAATTCATGAG+AGG | + | chr1_4:48670252-48670271 | None:intergenic | 35.0% | |
!! | GTTTGGGTTATTTTGTAGGA+AGG | - | chr1_4:48670358-48670377 | Msa0167010:intron | 35.0% |
GATATCTAATAATGGCAGCT+GGG | + | chr1_4:48664224-48664243 | None:intergenic | 35.0% | |
TGATATCTAATAATGGCAGC+TGG | + | chr1_4:48664225-48664244 | None:intergenic | 35.0% | |
AAGGTGGGTAAGATAAACAA+AGG | - | chr1_4:48670533-48670552 | Msa0167010:intron | 35.0% | |
AGGTGGGTAAGATAAACAAA+GGG | - | chr1_4:48670534-48670553 | Msa0167010:intron | 35.0% | |
CCTGAATTTCTATAATCTCG+CGG | + | chr1_4:48664371-48664390 | None:intergenic | 35.0% | |
AATATATACCAGCCCAATGA+TGG | + | chr1_4:48664432-48664451 | None:intergenic | 35.0% | |
ATTCTCTCTAACCTTGTTAC+AGG | - | chr1_4:48664557-48664576 | Msa0167010:intron | 35.0% | |
ACAGGTCTGTAAAAAATGAG+CGG | - | chr1_4:48664575-48664594 | Msa0167010:intron | 35.0% | |
TTGGAAGAAATGGTTGCAGT+TGG | + | chr1_4:48661078-48661097 | None:intergenic | 40.0% | |
ACTGCAACCATTTCTTCCAA+TGG | - | chr1_4:48661078-48661097 | Msa0167010:three_prime_UTR | 40.0% | |
!! | TTCTTCTAGTTTCCGACGAA+CGG | - | chr1_4:48661110-48661129 | Msa0167010:three_prime_UTR | 40.0% |
TAAGAAGGATGAGAGTGAAG+GGG | + | chr1_4:48661151-48661170 | None:intergenic | 40.0% | |
TGGCTCGTTAAATCATCTCA+AGG | - | chr1_4:48661238-48661257 | Msa0167010:three_prime_UTR | 40.0% | |
GCATCTCTTCCAGAAAGTAA+GGG | - | chr1_4:48661281-48661300 | Msa0167010:three_prime_UTR | 40.0% | |
GTTAGGTTAGAGTTCCAACT+AGG | - | chr1_4:48661367-48661386 | Msa0167010:intron | 40.0% | |
GTTAGATGAAAACCTGGCTT+AGG | - | chr1_4:48661451-48661470 | Msa0167010:intron | 40.0% | |
TAGCTTCAAAAACCTAAGCC+AGG | + | chr1_4:48661466-48661485 | None:intergenic | 40.0% | |
TGAGCATAACTCACTTGGTA+GGG | - | chr1_4:48661549-48661568 | Msa0167010:exon | 40.0% | |
GACAATGCATTGCAATATGC+AGG | - | chr1_4:48661571-48661590 | Msa0167010:CDS | 40.0% | |
CAATGCATTGCAATATGCAG+GGG | - | chr1_4:48661573-48661592 | Msa0167010:CDS | 40.0% | |
AGTGAATAAGTGGAGAATCC+GGG | + | chr1_4:48661612-48661631 | None:intergenic | 40.0% | |
CAAACTCTTGATATCTGCTG+CGG | + | chr1_4:48661717-48661736 | None:intergenic | 40.0% | |
CACCAAGTGCCAAAATCAAA+CGG | - | chr1_4:48661942-48661961 | Msa0167010:intron | 40.0% | |
ACCAAGTGCCAAAATCAAAC+GGG | - | chr1_4:48661943-48661962 | Msa0167010:intron | 40.0% | |
TGCTGAGTTAGTGGTGATAA+GGG | + | chr1_4:48662057-48662076 | None:intergenic | 40.0% | |
ATGCTGAGTTAGTGGTGATA+AGG | + | chr1_4:48662058-48662077 | None:intergenic | 40.0% | |
TTGTGACACTTCAGCAGAAA+TGG | - | chr1_4:48662077-48662096 | Msa0167010:CDS | 40.0% | |
!! | GGAAAATGGTTTTACTCCTC+AGG | - | chr1_4:48662437-48662456 | Msa0167010:CDS | 40.0% |
GTGTCAATGTCTTTCATGGT+TGG | - | chr1_4:48662473-48662492 | Msa0167010:CDS | 40.0% | |
AGTTTGAGTGCTAACTGTGA+TGG | - | chr1_4:48662547-48662566 | Msa0167010:CDS | 40.0% | |
! | TGGTTTCTTGCATTTTCCCT+GGG | + | chr1_4:48662912-48662931 | None:intergenic | 40.0% |
! | ATGGTTTCTTGCATTTTCCC+TGG | + | chr1_4:48662913-48662932 | None:intergenic | 40.0% |
!! | AGTGGGGTTGATGTTACTTA+TGG | - | chr1_4:48662968-48662987 | Msa0167010:CDS | 40.0% |
AGAAGTGGAAACTCGTGATT+CGG | - | chr1_4:48663111-48663130 | Msa0167010:intron | 40.0% | |
TCCTACTTCTTTGGTATCAC+CGG | - | chr1_4:48663367-48663386 | Msa0167010:intron | 40.0% | |
ACGGGACATGTCAATTAAGA+CGG | - | chr1_4:48663433-48663452 | Msa0167010:intron | 40.0% | |
ACATGTCAATTAAGACGGGT+GGG | - | chr1_4:48663438-48663457 | Msa0167010:intron | 40.0% | |
GTCAATGTTGTTCATGGTAG+TGG | - | chr1_4:48663461-48663480 | Msa0167010:CDS | 40.0% | |
TCTTTATCTGGATGTGTTGC+CGG | + | chr1_4:48663557-48663576 | None:intergenic | 40.0% | |
ACACCCATTCAGTCACAAAA+GGG | - | chr1_4:48663635-48663654 | Msa0167010:intron | 40.0% | |
ACAGTTGAAACAGAAGCAGT+CGG | - | chr1_4:48663761-48663780 | Msa0167010:intron | 40.0% | |
! | GGAGATTTTACAGAAGATGC+GGG | + | chr1_4:48663809-48663828 | None:intergenic | 40.0% |
CTGTAAAATCTCCACAAGGA+AGG | - | chr1_4:48663816-48663835 | Msa0167010:intron | 40.0% | |
GATACAAGTCACTCGAACAA+GGG | - | chr1_4:48663839-48663858 | Msa0167010:intron | 40.0% | |
TCAGTTTCTCCAGAGTCATT+GGG | - | chr1_4:48663881-48663900 | Msa0167010:intron | 40.0% | |
!!! | TTTTTGAGACCCAATGACTC+TGG | + | chr1_4:48663893-48663912 | None:intergenic | 40.0% |
CATGAATGACAGTTCATGAG+AGG | + | chr1_4:48664003-48664022 | None:intergenic | 40.0% | |
! | TTCTACCTCGCTTAGAGTTT+TGG | - | chr1_4:48664136-48664155 | Msa0167010:intron | 40.0% |
! | CTTTTTACATTTGACCACCC+AGG | - | chr1_4:48664344-48664363 | Msa0167010:intron | 40.0% |
CCGCGAGATTATAGAAATTC+AGG | - | chr1_4:48664368-48664387 | Msa0167010:intron | 40.0% | |
TGGCAGAGATTTAGGCATAA+TGG | - | chr1_4:48664727-48664746 | Msa0167010:intron | 40.0% | |
AAAAGAGAGACTGAACAGCA+AGG | + | chr1_4:48664810-48664829 | None:intergenic | 40.0% | |
!! | CTCGTGCTATTTGTAGAAAG+TGG | - | chr1_4:48664973-48664992 | Msa0167010:intron | 40.0% |
AGAAAATAGTTGCAGCTGGT+AGG | - | chr1_4:48665175-48665194 | Msa0167010:intron | 40.0% | |
GAAAATAGTTGCAGCTGGTA+GGG | - | chr1_4:48665176-48665195 | Msa0167010:intron | 40.0% | |
!! | GTTCAACAGGCTTTTGAAGA+TGG | + | chr1_4:48665228-48665247 | None:intergenic | 40.0% |
TCTTCAAAAGCCTGTTGAAC+CGG | - | chr1_4:48665228-48665247 | Msa0167010:intron | 40.0% | |
! | ACTTGTTAAACCGGTTCAAC+AGG | + | chr1_4:48665241-48665260 | None:intergenic | 40.0% |
AATTTCGTGTTGAGCGAAAG+AGG | - | chr1_4:48665303-48665322 | Msa0167010:intron | 40.0% | |
ATTTCGTGTTGAGCGAAAGA+GGG | - | chr1_4:48665304-48665323 | Msa0167010:intron | 40.0% | |
!! | TCTAATTCTAAGGTAGCACC+TGG | - | chr1_4:48665447-48665466 | Msa0167010:intron | 40.0% |
! | ATGTGAGGCATCATTTAACC+AGG | + | chr1_4:48665572-48665591 | None:intergenic | 40.0% |
GGTGTGTGACCTAAATCAAT+AGG | + | chr1_4:48666036-48666055 | None:intergenic | 40.0% | |
ACGCTTATCACTGTTAGGTT+TGG | + | chr1_4:48666072-48666091 | None:intergenic | 40.0% | |
AATTGAATCGTGAAGCTGTC+GGG | + | chr1_4:48666731-48666750 | None:intergenic | 40.0% | |
CAATTGAATCGTGAAGCTGT+CGG | + | chr1_4:48666732-48666751 | None:intergenic | 40.0% | |
CTTAATTGGTGGAATACAGG+AGG | + | chr1_4:48666790-48666809 | None:intergenic | 40.0% | |
CTCCTGTATTCCACCAATTA+AGG | - | chr1_4:48666788-48666807 | Msa0167010:intron | 40.0% | |
GTCCTTAATTGGTGGAATAC+AGG | + | chr1_4:48666793-48666812 | None:intergenic | 40.0% | |
GATGTACAGTCCTTAATTGG+TGG | + | chr1_4:48666801-48666820 | None:intergenic | 40.0% | |
AAGTGCAACATCACTCTCAA+TGG | - | chr1_4:48667331-48667350 | Msa0167010:intron | 40.0% | |
TTGGAAGAAATGGTTGCAGT+TGG | + | chr1_4:48661078-48661097 | None:intergenic | 40.0% | |
ACTGCAACCATTTCTTCCAA+TGG | - | chr1_4:48661078-48661097 | Msa0167010:three_prime_UTR | 40.0% | |
!! | TTCTTCTAGTTTCCGACGAA+CGG | - | chr1_4:48661110-48661129 | Msa0167010:three_prime_UTR | 40.0% |
TAAGAAGGATGAGAGTGAAG+GGG | + | chr1_4:48661151-48661170 | None:intergenic | 40.0% | |
TGGCTCGTTAAATCATCTCA+AGG | - | chr1_4:48661238-48661257 | Msa0167010:three_prime_UTR | 40.0% | |
GCATCTCTTCCAGAAAGTAA+GGG | - | chr1_4:48661281-48661300 | Msa0167010:three_prime_UTR | 40.0% | |
GTTAGGTTAGAGTTCCAACT+AGG | - | chr1_4:48661367-48661386 | Msa0167010:intron | 40.0% | |
TGAGCATAACTCACTTGGTA+GGG | - | chr1_4:48661549-48661568 | Msa0167010:exon | 40.0% | |
GACAATGCATTGCAATATGC+AGG | - | chr1_4:48661571-48661590 | Msa0167010:CDS | 40.0% | |
CAATGCATTGCAATATGCAG+GGG | - | chr1_4:48661573-48661592 | Msa0167010:CDS | 40.0% | |
AGTGAATAAGTGGAGAATCC+GGG | + | chr1_4:48661612-48661631 | None:intergenic | 40.0% | |
CAAACTCTTGATATCTGCTG+CGG | + | chr1_4:48661717-48661736 | None:intergenic | 40.0% | |
CACCAAGTGCCAAAATCAAA+CGG | - | chr1_4:48661942-48661961 | Msa0167010:intron | 40.0% | |
! | CAAACGGTGCTAAATTTGCA+AGG | - | chr1_4:48668247-48668266 | Msa0167010:intron | 40.0% |
TTGTGACACTTCAGCAGAAA+TGG | - | chr1_4:48662077-48662096 | Msa0167010:CDS | 40.0% | |
!! | GGAAAATGGTTTTACTCCTC+AGG | - | chr1_4:48662437-48662456 | Msa0167010:CDS | 40.0% |
AGTTTGAGTGCTAACTGTGA+TGG | - | chr1_4:48662547-48662566 | Msa0167010:CDS | 40.0% | |
! | TGGTTTCTTGCATTTTCCCA+GGG | + | chr1_4:48669199-48669218 | None:intergenic | 40.0% |
! | ATGGTTTCTTGCATTTTCCC+AGG | + | chr1_4:48662913-48662932 | None:intergenic | 40.0% |
!! | AGTGGGGTTGATGTTACTTA+TGG | - | chr1_4:48662968-48662987 | Msa0167010:CDS | 40.0% |
AGAAGTGGAAACTCGTGATT+CGG | - | chr1_4:48663111-48663130 | Msa0167010:intron | 40.0% | |
TCCTACTTCTTTGGTATCAC+CGG | - | chr1_4:48663367-48663386 | Msa0167010:intron | 40.0% | |
ACGGGACATGTCAATTAAGA+CGG | - | chr1_4:48663433-48663452 | Msa0167010:intron | 40.0% | |
GTCAATGTTGTTCATGGTAG+TGG | - | chr1_4:48663461-48663480 | Msa0167010:CDS | 40.0% | |
TCTTTATCTGGATGTGTTGC+CGG | + | chr1_4:48663557-48663576 | None:intergenic | 40.0% | |
ACACCCATTCAGTCACAAAA+GGG | - | chr1_4:48663635-48663654 | Msa0167010:intron | 40.0% | |
ACAGTTGAAACAGAAGCAGT+TGG | - | chr1_4:48663761-48663780 | Msa0167010:intron | 40.0% | |
! | GGAGATTTTACAGAAGATGC+GGG | + | chr1_4:48663809-48663828 | None:intergenic | 40.0% |
CTGTAAAATCTCCACAAGGA+AGG | - | chr1_4:48663816-48663835 | Msa0167010:intron | 40.0% | |
GATACAAGTCACTCGAACAA+GGG | - | chr1_4:48663839-48663858 | Msa0167010:intron | 40.0% | |
! | TCTGTTTCTCCAGAGTCATT+GGG | - | chr1_4:48670130-48670149 | Msa0167010:intron | 40.0% |
!!! | TTTTTGAGACCCAATGACTC+TGG | + | chr1_4:48663893-48663912 | None:intergenic | 40.0% |
!! | TGGGTTATTTTGTAGGAAGG+TGG | - | chr1_4:48670361-48670380 | Msa0167010:intron | 40.0% |
! | TTCTACCTCGCTTAGAGTTT+TGG | - | chr1_4:48664136-48664155 | Msa0167010:intron | 40.0% |
! | CTTTTTACATTTGACCACCC+AGG | - | chr1_4:48664344-48664363 | Msa0167010:intron | 40.0% |
CCGCGAGATTATAGAAATTC+AGG | - | chr1_4:48664368-48664387 | Msa0167010:intron | 40.0% | |
GATTAACAGGGCAGAGATTT+AGG | - | chr1_4:48670966-48670985 | Msa0167010:CDS | 40.0% | |
AAAAGAGAGACTGAACAGCA+AGG | + | chr1_4:48664810-48664829 | None:intergenic | 40.0% | |
GAAGAAATGGTTGCAGTTGG+AGG | + | chr1_4:48661075-48661094 | None:intergenic | 45.0% | |
TCGGAAACTAGAAGAAGTGG+GGG | + | chr1_4:48661106-48661125 | None:intergenic | 45.0% | |
GTCGGAAACTAGAAGAAGTG+GGG | + | chr1_4:48661107-48661126 | None:intergenic | 45.0% | |
CGTCGGAAACTAGAAGAAGT+GGG | + | chr1_4:48661108-48661127 | None:intergenic | 45.0% | |
TCGTCGGAAACTAGAAGAAG+TGG | + | chr1_4:48661109-48661128 | None:intergenic | 45.0% | |
GTGAGTAAACAACCGTTCGT+CGG | + | chr1_4:48661125-48661144 | None:intergenic | 45.0% | |
AGATGCCAGAGATGGCTAAA+CGG | + | chr1_4:48661267-48661286 | None:intergenic | 45.0% | |
GGCATCTCTTCCAGAAAGTA+AGG | - | chr1_4:48661280-48661299 | Msa0167010:three_prime_UTR | 45.0% | |
GTGAGCATAACTCACTTGGT+AGG | - | chr1_4:48661548-48661567 | Msa0167010:exon | 45.0% | |
GTGAATAAGTGGAGAATCCG+GGG | + | chr1_4:48661611-48661630 | None:intergenic | 45.0% | |
CCAAGTGCCAAAATCAAACG+GGG | - | chr1_4:48661944-48661963 | Msa0167010:intron | 45.0% | |
CAAACGGGGCTAAATTTGCA+AGG | - | chr1_4:48661958-48661977 | Msa0167010:intron | 45.0% | |
GTGTCACAATGCTGAGTTAG+TGG | + | chr1_4:48662066-48662085 | None:intergenic | 45.0% | |
TATACCATCGGCAGTCTCAA+GGG | + | chr1_4:48662376-48662395 | None:intergenic | 45.0% | |
ATATACCATCGGCAGTCTCA+AGG | + | chr1_4:48662377-48662396 | None:intergenic | 45.0% | |
AGTGCATAGCTTTCCCAGTT+TGG | + | chr1_4:48662637-48662656 | None:intergenic | 45.0% | |
AGCTATGCACTAGAATGCAC+CGG | - | chr1_4:48662646-48662665 | Msa0167010:intron | 45.0% | |
ATCAGCTTCAGATCCTTCTC+CGG | + | chr1_4:48662668-48662687 | None:intergenic | 45.0% | |
TACACTATCCGGAACAGCAT+TGG | + | chr1_4:48662701-48662720 | None:intergenic | 45.0% | |
AAAGCCTCAAAGGAGATGAG+TGG | - | chr1_4:48662950-48662969 | Msa0167010:CDS | 45.0% | |
AAGCCTCAAAGGAGATGAGT+GGG | - | chr1_4:48662951-48662970 | Msa0167010:CDS | 45.0% | |
! | GGTAGTGGCGAAAATAGACA+TGG | - | chr1_4:48662989-48663008 | Msa0167010:CDS | 45.0% |
GCGAAAATAGACATGGTACC+AGG | - | chr1_4:48662996-48663015 | Msa0167010:CDS | 45.0% | |
ACGAGTTTCCACTTCTGTTG+AGG | + | chr1_4:48663107-48663126 | None:intergenic | 45.0% | |
TCCGGTGATACCAAAGAAGT+AGG | + | chr1_4:48663371-48663390 | None:intergenic | 45.0% | |
AGGCATTCCTCGAAGATGAA+CGG | - | chr1_4:48663414-48663433 | Msa0167010:intron | 45.0% | |
CGGGACATGTCAATTAAGAC+GGG | - | chr1_4:48663434-48663453 | Msa0167010:intron | 45.0% | |
GACATGTCAATTAAGACGGG+TGG | - | chr1_4:48663437-48663456 | Msa0167010:intron | 45.0% | |
CATGTCAATTAAGACGGGTG+GGG | - | chr1_4:48663439-48663458 | Msa0167010:intron | 45.0% | |
!! | ATGTTGTTCATGGTAGTGGC+AGG | - | chr1_4:48663465-48663484 | Msa0167010:CDS | 45.0% |
CAGAAGAAACAGCCTGTTAC+CGG | - | chr1_4:48663527-48663546 | Msa0167010:CDS | 45.0% | |
! | ACTCTTTTCCAAGGCTGGTA+AGG | + | chr1_4:48663591-48663610 | None:intergenic | 45.0% |
! | TCCTCCATCACTCTTTTCCA+AGG | + | chr1_4:48663600-48663619 | None:intergenic | 45.0% |
GACACCCATTCAGTCACAAA+AGG | - | chr1_4:48663634-48663653 | Msa0167010:intron | 45.0% | |
AGTAAACACATTGTCTGGGC+AGG | - | chr1_4:48663661-48663680 | Msa0167010:intron | 45.0% | |
!!! | ACTTTTTCAGCGAAGACTGG+AGG | - | chr1_4:48663716-48663735 | Msa0167010:intron | 45.0% |
! | TGACTTGTATCCCTTCCTTG+TGG | + | chr1_4:48663830-48663849 | None:intergenic | 45.0% |
GGATACAAGTCACTCGAACA+AGG | - | chr1_4:48663838-48663857 | Msa0167010:intron | 45.0% | |
! | CAATGACTCTGGAGAAACTG+AGG | + | chr1_4:48663882-48663901 | None:intergenic | 45.0% |
CTCAGTTTCTCCAGAGTCAT+TGG | - | chr1_4:48663880-48663899 | Msa0167010:intron | 45.0% | |
GCGGGGGTAAGATAAACAAA+GGG | - | chr1_4:48664287-48664306 | Msa0167010:intron | 45.0% | |
TTCTATAATCTCGCGGTCCT+GGG | + | chr1_4:48664364-48664383 | None:intergenic | 45.0% | |
TTTCTATAATCTCGCGGTCC+TGG | + | chr1_4:48664365-48664384 | None:intergenic | 45.0% | |
GATGGTGAAGAGCCTCTAAA+AGG | + | chr1_4:48664414-48664433 | None:intergenic | 45.0% | |
TAGAGGCTCTTCACCATCAT+TGG | - | chr1_4:48664416-48664435 | Msa0167010:intron | 45.0% | |
AGAGGCTCTTCACCATCATT+GGG | - | chr1_4:48664417-48664436 | Msa0167010:intron | 45.0% | |
! | ACTGAAGTCTGAAGTGTGCA+AGG | - | chr1_4:48664648-48664667 | Msa0167010:intron | 45.0% |
! | CTGAAGTCTGAAGTGTGCAA+GGG | - | chr1_4:48664649-48664668 | Msa0167010:intron | 45.0% |
! | GGCATAATGGAGATGTGAGT+AGG | - | chr1_4:48664740-48664759 | Msa0167010:intron | 45.0% |
TGAACAGCAAGGATCTGCAA+TGG | + | chr1_4:48664799-48664818 | None:intergenic | 45.0% | |
!! | CAGGCTTTTGAAGATGGTTG+TGG | + | chr1_4:48665222-48665241 | None:intergenic | 45.0% |
GATAGAACTGGCTAACATCC+AGG | + | chr1_4:48665468-48665487 | None:intergenic | 45.0% | |
TTGACGATTGAGCAACTTCC+TGG | - | chr1_4:48665551-48665570 | Msa0167010:intron | 45.0% | |
! | AAGTGTGTGACGTTTTGTCG+TGG | - | chr1_4:48666212-48666231 | Msa0167010:intron | 45.0% |
!! | AGCTGTCGGGTTCAAGTTTT+CGG | + | chr1_4:48666718-48666737 | None:intergenic | 45.0% |
GAAGAAATGGTTGCAGTTGG+AGG | + | chr1_4:48661075-48661094 | None:intergenic | 45.0% | |
TCGGAAACTAGAAGAAGTGG+GGG | + | chr1_4:48661106-48661125 | None:intergenic | 45.0% | |
GTCGGAAACTAGAAGAAGTG+GGG | + | chr1_4:48661107-48661126 | None:intergenic | 45.0% | |
CGTCGGAAACTAGAAGAAGT+GGG | + | chr1_4:48661108-48661127 | None:intergenic | 45.0% | |
TCGTCGGAAACTAGAAGAAG+TGG | + | chr1_4:48661109-48661128 | None:intergenic | 45.0% | |
GTGAGTAAACAACCGTTCGT+CGG | + | chr1_4:48661125-48661144 | None:intergenic | 45.0% | |
AGATGCCAGAGATGGCTAAA+CGG | + | chr1_4:48661267-48661286 | None:intergenic | 45.0% | |
GGCATCTCTTCCAGAAAGTA+AGG | - | chr1_4:48661280-48661299 | Msa0167010:three_prime_UTR | 45.0% | |
GTGAGCATAACTCACTTGGT+AGG | - | chr1_4:48661548-48661567 | Msa0167010:exon | 45.0% | |
GTGAATAAGTGGAGAATCCG+GGG | + | chr1_4:48661611-48661630 | None:intergenic | 45.0% | |
!! | CACCGTTTGATTTTGGCACT+TGG | + | chr1_4:48668236-48668255 | None:intergenic | 45.0% |
TGCTGAGTTAGTGGTGACAA+GGG | + | chr1_4:48668346-48668365 | None:intergenic | 45.0% | |
ATGCTGAGTTAGTGGTGACA+AGG | + | chr1_4:48668347-48668366 | None:intergenic | 45.0% | |
GTGTCACAATGCTGAGTTAG+TGG | + | chr1_4:48662066-48662085 | None:intergenic | 45.0% | |
TATACCATCGGCAGTCTCAA+GGG | + | chr1_4:48662376-48662395 | None:intergenic | 45.0% | |
ATATACCATCGGCAGTCTCA+AGG | + | chr1_4:48662377-48662396 | None:intergenic | 45.0% | |
GTGTCAATGTCTTTCGTGGT+TGG | - | chr1_4:48668762-48668781 | Msa0167010:CDS | 45.0% | |
AGAGCATAGCTTTCCCAGTT+TGG | + | chr1_4:48668924-48668943 | None:intergenic | 45.0% | |
!! | AGCTATGCTCTAGAATGCAC+CGG | - | chr1_4:48668933-48668952 | Msa0167010:intron | 45.0% |
ATCAGCTTCAGATCCTTCTC+CGG | + | chr1_4:48662668-48662687 | None:intergenic | 45.0% | |
TACACTATCCGGAACAGCAT+TGG | + | chr1_4:48662701-48662720 | None:intergenic | 45.0% | |
AAAGCCTCAAAGGAGATGAG+TGG | - | chr1_4:48662950-48662969 | Msa0167010:CDS | 45.0% | |
AAGCCTCAAAGGAGATGAGT+GGG | - | chr1_4:48662951-48662970 | Msa0167010:CDS | 45.0% | |
! | GGTAGTGGCGAAAATAGACA+TGG | - | chr1_4:48662989-48663008 | Msa0167010:CDS | 45.0% |
GCGAAAATAGACATGGTACC+AGG | - | chr1_4:48662996-48663015 | Msa0167010:CDS | 45.0% | |
ACGAGTTTCCACTTCTGTTG+AGG | + | chr1_4:48663107-48663126 | None:intergenic | 45.0% | |
TCCGGTGATACCAAAGAAGT+AGG | + | chr1_4:48663371-48663390 | None:intergenic | 45.0% | |
AGGCATTCCTCGAAGATGAA+CGG | - | chr1_4:48663414-48663433 | Msa0167010:intron | 45.0% | |
CGGGACATGTCAATTAAGAC+GGG | - | chr1_4:48663434-48663453 | Msa0167010:intron | 45.0% | |
CATGTCAATTAAGACGGGTG+AGG | - | chr1_4:48663439-48663458 | Msa0167010:intron | 45.0% | |
GGTGAGGTCAATGTTGTTCA+TGG | - | chr1_4:48669704-48669723 | Msa0167010:intron | 45.0% | |
!! | ATGTTGTTCATGGTAGTGGC+AGG | - | chr1_4:48663465-48663484 | Msa0167010:CDS | 45.0% |
CAGAAGAAACAGCCTGTTAC+CGG | - | chr1_4:48663527-48663546 | Msa0167010:CDS | 45.0% | |
! | GTGGAGATCTGGTCTTTATC+TGG | + | chr1_4:48669818-48669837 | None:intergenic | 45.0% |
! | ACTCTTTTCCAAGGCTGGTA+AGG | + | chr1_4:48663591-48663610 | None:intergenic | 45.0% |
! | TCCTCCATCACTCTTTTCCA+AGG | + | chr1_4:48663600-48663619 | None:intergenic | 45.0% |
GACACCCATTCAGTCACAAA+AGG | - | chr1_4:48663634-48663653 | Msa0167010:intron | 45.0% | |
AGTAAACACATTGTCTGGGC+AGG | - | chr1_4:48663661-48663680 | Msa0167010:intron | 45.0% | |
!!! | ACTTTTTCAGCGAAGACTGG+AGG | - | chr1_4:48663716-48663735 | Msa0167010:intron | 45.0% |
! | TGACTTGTATCCCTTCCTTG+TGG | + | chr1_4:48663830-48663849 | None:intergenic | 45.0% |
GGATACAAGTCACTCGAACA+AGG | - | chr1_4:48663838-48663857 | Msa0167010:intron | 45.0% | |
! | CAATGACTCTGGAGAAACAG+AGG | + | chr1_4:48670131-48670150 | None:intergenic | 45.0% |
! | CTCTGTTTCTCCAGAGTCAT+TGG | - | chr1_4:48670129-48670148 | Msa0167010:intron | 45.0% |
TTCTATAATCTCGCGGTCCT+GGG | + | chr1_4:48664364-48664383 | None:intergenic | 45.0% | |
TTTCTATAATCTCGCGGTCC+TGG | + | chr1_4:48664365-48664384 | None:intergenic | 45.0% | |
GATGGTGAAGAGCCTCTAAA+AGG | + | chr1_4:48664414-48664433 | None:intergenic | 45.0% | |
TAGAGGCTCTTCACCATCAT+TGG | - | chr1_4:48664416-48664435 | Msa0167010:intron | 45.0% | |
AGAGGCTCTTCACCATCATT+GGG | - | chr1_4:48664417-48664436 | Msa0167010:intron | 45.0% | |
! | ACTGAAGTCTGAAGTGTGCA+AGG | - | chr1_4:48664648-48664667 | Msa0167010:intron | 45.0% |
! | CTGAAGTCTGAAGTGTGCAA+GGG | - | chr1_4:48664649-48664668 | Msa0167010:intron | 45.0% |
GGGCAGAGATTTAGGCATAA+TGG | - | chr1_4:48670974-48670993 | Msa0167010:intron | 45.0% | |
! | GGCATAATGGAGATGTGAGT+AGG | - | chr1_4:48664740-48664759 | Msa0167010:intron | 45.0% |
TGAACAGCAAGGATCTGCAA+TGG | + | chr1_4:48664799-48664818 | None:intergenic | 45.0% | |
GAGGATTCTCTTCCACTGTA+TGG | - | chr1_4:48671109-48671128 | Msa0167010:CDS | 45.0% | |
!! | AAAAATTAAAAATAAATTAC+AGG | - | chr1_4:48661984-48662003 | Msa0167010:intron | 5.0% |
!! | AAAATTAAAAATAAATTACA+GGG | - | chr1_4:48661985-48662004 | Msa0167010:intron | 5.0% |
!!! | AATTTTTTTTTTTTTACTTT+TGG | - | chr1_4:48668066-48668085 | Msa0167010:intron | 5.0% |
!! | AAAAATTAAAAATAAATTAC+AGG | - | chr1_4:48661984-48662003 | Msa0167010:intron | 5.0% |
!! | AAAATTAAAAATAAATTACA+GGG | - | chr1_4:48661985-48662004 | Msa0167010:intron | 5.0% |
AATGGTTGCAGTTGGAGGAG+TGG | + | chr1_4:48661070-48661089 | None:intergenic | 50.0% | |
GGAAACCGTTTAGCCATCTC+TGG | - | chr1_4:48661259-48661278 | Msa0167010:three_prime_UTR | 50.0% | |
TCTGGAAGAGATGCCAGAGA+TGG | + | chr1_4:48661275-48661294 | None:intergenic | 50.0% | |
ACACACTGTGAGGTCCTAGT+TGG | + | chr1_4:48661384-48661403 | None:intergenic | 50.0% | |
AAACTCGCACACACACTGTG+AGG | + | chr1_4:48661394-48661413 | None:intergenic | 50.0% | |
GTCGGTGAGCATAACTCACT+TGG | - | chr1_4:48661544-48661563 | Msa0167010:exon | 50.0% | |
!! | CCCCGTTTGATTTTGGCACT+TGG | + | chr1_4:48661947-48661966 | None:intergenic | 50.0% |
! | TTTTCCCTTGAGACTGCCGA+TGG | - | chr1_4:48662369-48662388 | Msa0167010:CDS | 50.0% |
GCATAGCTTTCCCAGTTTGG+AGG | + | chr1_4:48662634-48662653 | None:intergenic | 50.0% | |
! | TGATTCGGCCAATGCTGTTC+CGG | - | chr1_4:48662690-48662709 | Msa0167010:intron | 50.0% |
TCAGGCAACACCAACGAAGT+AGG | + | chr1_4:48662884-48662903 | None:intergenic | 50.0% | |
AGCCTCAAAGGAGATGAGTG+GGG | - | chr1_4:48662952-48662971 | Msa0167010:CDS | 50.0% | |
AACCCCACTCATCTCCTTTG+AGG | + | chr1_4:48662957-48662976 | None:intergenic | 50.0% | |
GAGCTCTACCTCAACAGAAG+TGG | - | chr1_4:48663096-48663115 | Msa0167010:intron | 50.0% | |
GGTATCACCGGATAAGACCA+CGG | - | chr1_4:48663379-48663398 | Msa0167010:intron | 50.0% | |
GTATCACCGGATAAGACCAC+GGG | - | chr1_4:48663380-48663399 | Msa0167010:intron | 50.0% | |
!! | CAATCTCCCGTGGTCTTATC+CGG | + | chr1_4:48663389-48663408 | None:intergenic | 50.0% |
GACCACGGGAGATTGCAATA+AGG | - | chr1_4:48663394-48663413 | Msa0167010:intron | 50.0% | |
! | TGCCTTATTGCAATCTCCCG+TGG | + | chr1_4:48663399-48663418 | None:intergenic | 50.0% |
GGCATTCCTCGAAGATGAAC+GGG | - | chr1_4:48663415-48663434 | Msa0167010:intron | 50.0% | |
ACATGTCCCGTTCATCTTCG+AGG | + | chr1_4:48663424-48663443 | None:intergenic | 50.0% | |
GGTGGGGTCAATGTTGTTCA+TGG | - | chr1_4:48663455-48663474 | Msa0167010:intron | 50.0% | |
!! | CGGTAACAGGCTGTTTCTTC+TGG | + | chr1_4:48663529-48663548 | None:intergenic | 50.0% |
! | GCGGAGATCTGGTCTTTATC+TGG | + | chr1_4:48663569-48663588 | None:intergenic | 50.0% |
! | CTTTTCCAAGGCTGGTAAGG+CGG | + | chr1_4:48663588-48663607 | None:intergenic | 50.0% |
! | CCATCACTCTTTTCCAAGGC+TGG | + | chr1_4:48663596-48663615 | None:intergenic | 50.0% |
CCAGCCTTGGAAAAGAGTGA+TGG | - | chr1_4:48663593-48663612 | Msa0167010:intron | 50.0% | |
GCCTTGGAAAAGAGTGATGG+AGG | - | chr1_4:48663596-48663615 | Msa0167010:intron | 50.0% | |
! | GGAAAAGAGTGATGGAGGAC+TGG | - | chr1_4:48663601-48663620 | Msa0167010:intron | 50.0% |
! | TGGCATTGGGTGAGAAGTGT+TGG | + | chr1_4:48664030-48664049 | None:intergenic | 50.0% |
TTGCGCCAAAACTCTAAGCG+AGG | + | chr1_4:48664144-48664163 | None:intergenic | 50.0% | |
GGCGGGGGTAAGATAAACAA+AGG | - | chr1_4:48664286-48664305 | Msa0167010:intron | 50.0% | |
GGAGATGTGAGTAGGTAGCT+AGG | - | chr1_4:48664748-48664767 | Msa0167010:intron | 50.0% | |
GAGGATTCTCTTCCACCGTA+TGG | - | chr1_4:48664862-48664881 | Msa0167010:intron | 50.0% | |
! | TGACGTTTTGTCGTGGTGTG+AGG | - | chr1_4:48666219-48666238 | Msa0167010:intron | 50.0% |
!! | GCTGTCGGGTTCAAGTTTTC+GGG | + | chr1_4:48666717-48666736 | None:intergenic | 50.0% |
TGGTGGAATACAGGAGGTAG+TGG | + | chr1_4:48666784-48666803 | None:intergenic | 50.0% | |
CAAATGGATCTGTGGCGCAA+TGG | - | chr1_4:48666917-48666936 | Msa0167010:intron | 50.0% | |
GAACACGCAACCTTCTGATC+TGG | + | chr1_4:48666957-48666976 | None:intergenic | 50.0% | |
TTGCGTGTTCGATTCACGTC+AGG | - | chr1_4:48666967-48666986 | Msa0167010:intron | 50.0% | |
AATGGTTGCAGTTGGAGGAG+TGG | + | chr1_4:48661070-48661089 | None:intergenic | 50.0% | |
GGAAACCGTTTAGCCATCTC+TGG | - | chr1_4:48661259-48661278 | Msa0167010:three_prime_UTR | 50.0% | |
TCTGGAAGAGATGCCAGAGA+TGG | + | chr1_4:48661275-48661294 | None:intergenic | 50.0% | |
ACACACTGTGAGGTCCTAGT+TGG | + | chr1_4:48661384-48661403 | None:intergenic | 50.0% | |
AAACTCGCACACACACTGTG+AGG | + | chr1_4:48661394-48661413 | None:intergenic | 50.0% | |
GTCGGTGAGCATAACTCACT+TGG | - | chr1_4:48661544-48661563 | Msa0167010:exon | 50.0% | |
! | TTTTCCCTTGAGACTGCCGA+TGG | - | chr1_4:48662369-48662388 | Msa0167010:CDS | 50.0% |
GCATAGCTTTCCCAGTTTGG+AGG | + | chr1_4:48662634-48662653 | None:intergenic | 50.0% | |
! | TGATTCGGCCAATGCTGTTC+CGG | - | chr1_4:48662690-48662709 | Msa0167010:intron | 50.0% |
TCAGGCAACACCAACGAAGT+AGG | + | chr1_4:48662884-48662903 | None:intergenic | 50.0% | |
AGCCTCAAAGGAGATGAGTG+GGG | - | chr1_4:48662952-48662971 | Msa0167010:CDS | 50.0% | |
AACCCCACTCATCTCCTTTG+AGG | + | chr1_4:48662957-48662976 | None:intergenic | 50.0% | |
GAGCTCTACCTCAACAGAAG+TGG | - | chr1_4:48663096-48663115 | Msa0167010:intron | 50.0% | |
GGTATCACCGGATAAGACCA+CGG | - | chr1_4:48663379-48663398 | Msa0167010:intron | 50.0% | |
GTATCACCGGATAAGACCAC+GGG | - | chr1_4:48663380-48663399 | Msa0167010:intron | 50.0% | |
!! | CAATCTCCCGTGGTCTTATC+CGG | + | chr1_4:48663389-48663408 | None:intergenic | 50.0% |
GACCACGGGAGATTGCAATA+AGG | - | chr1_4:48663394-48663413 | Msa0167010:intron | 50.0% | |
! | TGCCTTATTGCAATCTCCCG+TGG | + | chr1_4:48663399-48663418 | None:intergenic | 50.0% |
GGCATTCCTCGAAGATGAAC+GGG | - | chr1_4:48663415-48663434 | Msa0167010:intron | 50.0% | |
ACATGTCCCGTTCATCTTCG+AGG | + | chr1_4:48663424-48663443 | None:intergenic | 50.0% | |
!! | CGGTAACAGGCTGTTTCTTC+TGG | + | chr1_4:48663529-48663548 | None:intergenic | 50.0% |
! | CTTTTCCAAGGCTGGTAAGG+TGG | + | chr1_4:48663588-48663607 | None:intergenic | 50.0% |
! | CCATCACTCTTTTCCAAGGC+TGG | + | chr1_4:48663596-48663615 | None:intergenic | 50.0% |
CCAGCCTTGGAAAAGAGTGA+TGG | - | chr1_4:48663593-48663612 | Msa0167010:intron | 50.0% | |
GCCTTGGAAAAGAGTGATGG+AGG | - | chr1_4:48663596-48663615 | Msa0167010:intron | 50.0% | |
! | GGAAAAGAGTGATGGAGGAC+TGG | - | chr1_4:48663601-48663620 | Msa0167010:intron | 50.0% |
! | TGGCATTGGGTGAGAAGTGT+TGG | + | chr1_4:48664030-48664049 | None:intergenic | 50.0% |
TTGCGCCAAAACTCTAAGCG+AGG | + | chr1_4:48664144-48664163 | None:intergenic | 50.0% | |
GGAGATGTGAGTAGGTAGCT+AGG | - | chr1_4:48664748-48664767 | Msa0167010:intron | 50.0% | |
!! | GGGGGTGCCATTGGAAGAAA+TGG | + | chr1_4:48661088-48661107 | None:intergenic | 55.0% |
!! | AGAAGAAGTGGGGGTGCCAT+TGG | + | chr1_4:48661097-48661116 | None:intergenic | 55.0% |
CTGCTCGTTCATGAAACCCC+TGG | + | chr1_4:48662409-48662428 | None:intergenic | 55.0% | |
GCACTAGAATGCACCGGAGA+AGG | - | chr1_4:48662652-48662671 | Msa0167010:intron | 55.0% | |
!! | TTCGTTGGTGTTGCCTGACG+AGG | - | chr1_4:48662886-48662905 | Msa0167010:CDS | 55.0% |
CTACGATGACCTCCAGATGC+AGG | + | chr1_4:48663058-48663077 | None:intergenic | 55.0% | |
CTGCATCTGGAGGTCATCGT+AGG | - | chr1_4:48663056-48663075 | Msa0167010:intron | 55.0% | |
GCAGGAATAGACGTAGTGCC+CGG | - | chr1_4:48663483-48663502 | Msa0167010:CDS | 55.0% | |
ACAGCCTGTTACCGGAGATC+CGG | - | chr1_4:48663535-48663554 | Msa0167010:CDS | 55.0% | |
TGGATGTGTTGCCGGATCTC+CGG | + | chr1_4:48663549-48663568 | None:intergenic | 55.0% | |
TATAATCTCGCGGTCCTGGG+TGG | + | chr1_4:48664361-48664380 | None:intergenic | 55.0% | |
GCTCTTCACCATCATTGGGC+TGG | - | chr1_4:48664421-48664440 | Msa0167010:intron | 55.0% | |
CAAGGGAGCTCAGCTCCATA+CGG | + | chr1_4:48664880-48664899 | None:intergenic | 55.0% | |
GCGTCTGACTCCAGATCAGA+AGG | - | chr1_4:48666944-48666963 | Msa0167010:intron | 55.0% | |
!! | GGGGGTGCCATTGGAAGAAA+TGG | + | chr1_4:48661088-48661107 | None:intergenic | 55.0% |
!! | AGAAGAAGTGGGGGTGCCAT+TGG | + | chr1_4:48661097-48661116 | None:intergenic | 55.0% |
!! | GCTCTAGAATGCACCGGAGA+AGG | - | chr1_4:48668939-48668958 | Msa0167010:intron | 55.0% |
!! | TTCGTTGGTGTTGCCTGACG+AGG | - | chr1_4:48662886-48662905 | Msa0167010:CDS | 55.0% |
CTACGATGACCTCCAGATGC+AGG | + | chr1_4:48663058-48663077 | None:intergenic | 55.0% | |
CTGCATCTGGAGGTCATCGT+AGG | - | chr1_4:48663056-48663075 | Msa0167010:intron | 55.0% | |
GCAGGAATAGACGTAGTGCC+CGG | - | chr1_4:48663483-48663502 | Msa0167010:CDS | 55.0% | |
ACAGCCTGTTACCGGAGATC+CGG | - | chr1_4:48663535-48663554 | Msa0167010:CDS | 55.0% | |
TGGATGTGTTGCCGGATCTC+CGG | + | chr1_4:48663549-48663568 | None:intergenic | 55.0% | |
AGGCTGGTAAGGTGGAGATC+TGG | + | chr1_4:48669829-48669848 | None:intergenic | 55.0% | |
GATCTCCACCTTACCAGCCT+TGG | - | chr1_4:48669829-48669848 | Msa0167010:CDS | 55.0% | |
TATAATCTCGCGGTCCTGGG+TGG | + | chr1_4:48664361-48664380 | None:intergenic | 55.0% | |
GCTCTTCACCATCATTGGGC+TGG | - | chr1_4:48664421-48664440 | Msa0167010:intron | 55.0% | |
TGTATGGAGCTGAGCTCCCT+TGG | - | chr1_4:48671125-48671144 | Msa0167010:CDS | 55.0% | |
AGGGGCTGAGATTCGAACCC+CGG | - | chr1_4:48661591-48661610 | Msa0167010:intron | 60.0% | |
GAGCAGCGCACGCTGGAAAA+TGG | - | chr1_4:48662423-48662442 | Msa0167010:CDS | 60.0% | |
! | CATTTTCCCTGGGCCTCGTC+AGG | + | chr1_4:48662902-48662921 | None:intergenic | 60.0% |
AAGCAGCAGCCTGCATCTGG+AGG | - | chr1_4:48663046-48663065 | Msa0167010:intron | 60.0% | |
GTTGCCGGATCTCCGGTAAC+AGG | + | chr1_4:48663542-48663561 | None:intergenic | 60.0% | |
AGGCTGGTAAGGCGGAGATC+TGG | + | chr1_4:48663580-48663599 | None:intergenic | 60.0% | |
GATCTCCGCCTTACCAGCCT+TGG | - | chr1_4:48663580-48663599 | Msa0167010:CDS | 60.0% | |
CGTATGGAGCTGAGCTCCCT+TGG | - | chr1_4:48664878-48664897 | Msa0167010:intron | 60.0% | |
AGGGGCTGAGATTCGAACCC+CGG | - | chr1_4:48661591-48661610 | Msa0167010:intron | 60.0% | |
GAGCAGCGCACGCTGGAAAA+TGG | - | chr1_4:48662423-48662442 | Msa0167010:CDS | 60.0% | |
! | CATTTTCCCAGGGCCTCGTC+AGG | + | chr1_4:48669189-48669208 | None:intergenic | 60.0% |
AAGCAGCAGCCTGCATCTGG+AGG | - | chr1_4:48663046-48663065 | Msa0167010:intron | 60.0% | |
GTTGCCGGATCTCCGGTAAC+AGG | + | chr1_4:48663542-48663561 | None:intergenic | 60.0% | |
GGGAGCTCAGCTCCATACAG+TGG | + | chr1_4:48671124-48671143 | None:intergenic | 60.0% | |
CATGAACGAGCAGCGCACGC+TGG | - | chr1_4:48662416-48662435 | Msa0167010:CDS | 65.0% | |
GTGTTGCCTGACGAGGCCCA+GGG | - | chr1_4:48662893-48662912 | Msa0167010:CDS | 65.0% | |
CGGAAGCAGCAGCCTGCATC+TGG | - | chr1_4:48663043-48663062 | Msa0167010:intron | 65.0% | |
GGGAGCTCAGCTCCATACGG+TGG | + | chr1_4:48664877-48664896 | None:intergenic | 65.0% | |
CATGAACGAGCAGCGCACGC+TGG | - | chr1_4:48662416-48662435 | Msa0167010:CDS | 65.0% | |
GTGTTGCCTGACGAGGCCCT+GGG | - | chr1_4:48669180-48669199 | Msa0167010:CDS | 65.0% | |
CGGAAGCAGCAGCCTGCATC+TGG | - | chr1_4:48663043-48663062 | Msa0167010:intron | 65.0% | |
! | GGTGTTGCCTGACGAGGCCC+AGG | - | chr1_4:48662892-48662911 | Msa0167010:CDS | 70.0% |
! | GGTGTTGCCTGACGAGGCCC+TGG | - | chr1_4:48662892-48662911 | Msa0167010:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 48661047 | 48671158 | 48661047 | ID=Msa0167010;Name=Msa0167010 |
chr1_4 | mRNA | 48661047 | 48671158 | 48661047 | ID=Msa0167010-mRNA-1;Parent=Msa0167010;Name=Msa0167010-mRNA-1;_AED=0.13;_eAED=0.13;_QI=10|0.84|0.71|1|0.92|0.85|14|377|893 |
chr1_4 | exon | 48661047 | 48661379 | 48661047 | ID=Msa0167010-mRNA-1:exon:14226;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48661516 | 48661592 | 48661516 | ID=Msa0167010-mRNA-1:exon:14225;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48661771 | 48661829 | 48661771 | ID=Msa0167010-mRNA-1:exon:14224;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48662033 | 48662605 | 48662033 | ID=Msa0167010-mRNA-1:exon:14223;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48662731 | 48663054 | 48662731 | ID=Msa0167010-mRNA-1:exon:14222;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48663167 | 48663314 | 48663167 | ID=Msa0167010-mRNA-1:exon:14221;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48663458 | 48663601 | 48663458 | ID=Msa0167010-mRNA-1:exon:14220;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48668020 | 48668078 | 48668020 | ID=Msa0167010-mRNA-1:exon:14219;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48668282 | 48668854 | 48668282 | ID=Msa0167010-mRNA-1:exon:14218;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48669018 | 48669341 | 48669018 | ID=Msa0167010-mRNA-1:exon:14217;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48669454 | 48669601 | 48669454 | ID=Msa0167010-mRNA-1:exon:14216;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48669747 | 48669891 | 48669747 | ID=Msa0167010-mRNA-1:exon:14215;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48670909 | 48670985 | 48670909 | ID=Msa0167010-mRNA-1:exon:14214;Parent=Msa0167010-mRNA-1 |
chr1_4 | exon | 48671074 | 48671158 | 48671074 | ID=Msa0167010-mRNA-1:exon:14213;Parent=Msa0167010-mRNA-1 |
chr1_4 | five_prime_UTR | 48671149 | 48671158 | 48671149 | ID=Msa0167010-mRNA-1:five_prime_utr;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48671074 | 48671148 | 48671074 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48670909 | 48670985 | 48670909 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48669747 | 48669891 | 48669747 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48669454 | 48669601 | 48669454 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48669018 | 48669341 | 48669018 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48668282 | 48668854 | 48668282 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48668020 | 48668078 | 48668020 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48663458 | 48663601 | 48663458 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48663167 | 48663314 | 48663167 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48662731 | 48663054 | 48662731 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48662033 | 48662605 | 48662033 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48661771 | 48661829 | 48661771 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | CDS | 48661560 | 48661592 | 48661560 | ID=Msa0167010-mRNA-1:cds;Parent=Msa0167010-mRNA-1 |
chr1_4 | three_prime_UTR | 48661516 | 48661559 | 48661516 | ID=Msa0167010-mRNA-1:three_prime_utr;Parent=Msa0167010-mRNA-1 |
chr1_4 | three_prime_UTR | 48661047 | 48661379 | 48661047 | ID=Msa0167010-mRNA-1:three_prime_utr;Parent=Msa0167010-mRNA-1 |
Gene Sequence |
Protein sequence |