AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1229500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229500 MtrunA17_Chr8g0336591 100.000 115 0 0 1 115 1 115 2.89e-83 238
Msa1229500 MtrunA17_Chr4g0055191 52.830 106 47 2 1 105 38 141 3.77e-32 110
Msa1229500 MtrunA17_Chr5g0400051 56.311 103 37 4 18 115 66 165 5.36e-31 107
Msa1229500 MtrunA17_Chr3g0124361 53.571 56 25 1 32 87 118 172 8.43e-16 69.7
Msa1229500 MtrunA17_Chr8g0344991 57.143 56 22 1 38 93 39 92 2.17e-15 67.0
Msa1229500 MtrunA17_Chr3g0115551 48.148 54 28 0 29 82 81 134 2.33e-14 65.1
Msa1229500 MtrunA17_Chr2g0301141 57.407 54 22 1 29 82 177 229 1.16e-13 64.7
Msa1229500 MtrunA17_Chr2g0295651 44.444 72 31 2 14 78 35 104 2.20e-12 59.7
Msa1229500 MtrunA17_Chr7g0260011 53.659 41 19 0 37 77 214 254 4.95e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229500 AT2G44670.1 54.878 82 37 0 34 115 12 93 2.52e-29 102
Msa1229500 AT4G17670.1 47.368 114 41 4 16 115 51 159 4.96e-27 98.2
Msa1229500 AT5G47060.2 53.571 84 36 2 35 115 94 177 1.11e-25 95.1
Msa1229500 AT5G47060.1 53.571 84 36 2 35 115 94 177 1.11e-25 95.1
Msa1229500 AT1G78020.1 48.529 68 33 1 15 82 68 133 1.07e-17 74.3
Msa1229500 AT5G65040.1 47.541 61 30 1 33 93 54 112 2.04e-16 69.7
Msa1229500 AT1G22160.1 44.118 68 34 2 15 82 59 122 7.57e-15 66.6
Msa1229500 AT1G53885.1 55.319 47 21 0 35 81 39 85 3.67e-14 64.3
Msa1229500 AT1G53903.1 55.319 47 21 0 35 81 39 85 3.67e-14 64.3
Msa1229500 AT5G49120.1 50.000 46 23 0 33 78 63 108 3.51e-11 57.0
Msa1229500 AT5G20700.1 57.778 45 18 1 38 82 182 225 5.08e-11 58.2

Find 37 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAAAACATGCTAGATTT+TGG 0.214267 8_2:+5210676 None:intergenic
AAAGTATCAAAGATACTTTA+TGG 0.256012 8_2:-5209707 Msa1229500:three_prime_UTR
AGAATTTCTAACACCTCTTT+TGG 0.295222 8_2:+5210138 None:intergenic
ACATAAAGATGTCTTTGTTT+TGG 0.307802 8_2:+5210581 None:intergenic
GAGAAGGAGTTGGGAAAAGC+AGG 0.309590 8_2:+5210773 None:intergenic
TCAGAATTCTTCAAACAATA+AGG 0.335402 8_2:-5210107 Msa1229500:CDS
TACTTTATGGAGAATCTAGA+TGG 0.388164 8_2:-5209694 Msa1229500:three_prime_UTR
AGAGATGGAGAGAAGGAGTT+GGG 0.420733 8_2:+5210764 None:intergenic
GAGAGATGGAGAGAAGGAGT+TGG 0.427645 8_2:+5210763 None:intergenic
ATTGTTTGAAGAATTCTGAT+TGG 0.437983 8_2:+5210111 None:intergenic
ATGAATCCAAAGAGAAAAGT+TGG 0.445108 8_2:-5210171 Msa1229500:CDS
TTCTACAAAGATAACAAGCT+TGG 0.448464 8_2:+5210614 None:intergenic
AATGGATCATAAATATTATG+AGG 0.452370 8_2:-5209767 Msa1229500:three_prime_UTR
GGAGAAGGGATTGAAGAAGA+TGG 0.454187 8_2:+5210697 None:intergenic
TCATCATCATGTGGTGTCCA+TGG 0.456612 8_2:-5209649 Msa1229500:three_prime_UTR
TGAGTTGAGAGATGGAGAGA+AGG 0.480551 8_2:+5210757 None:intergenic
TGGAAGATTTCAACCAAAAG+AGG 0.483181 8_2:-5210151 Msa1229500:CDS
AAAGAATAGTTAGCAGCCAT+TGG 0.486211 8_2:+5210733 None:intergenic
ACAAAGACATCTTTATGTAC+AGG 0.489194 8_2:-5210576 Msa1229500:intron
TACAAAGATAACAAGCTTGG+AGG 0.501824 8_2:+5210617 None:intergenic
TATCTTTGTAGAAAACCTCT+TGG 0.507181 8_2:-5210604 Msa1229500:CDS
CCATTGGTTGAGTTGAGAGA+TGG 0.527760 8_2:+5210749 None:intergenic
TACATCCTTTCATCATCATG+TGG 0.550154 8_2:-5209658 Msa1229500:three_prime_UTR
ACTTTATGGAGAATCTAGAT+GGG 0.558477 8_2:-5209693 Msa1229500:three_prime_UTR
CCATCTCTCAACTCAACCAA+TGG 0.563428 8_2:-5210749 Msa1229500:exon
CTGCACTCATTGCTACAGAA+TGG 0.599412 8_2:+5210214 None:intergenic
CATTCTGTAGCAATGAGTGC+AGG 0.607408 8_2:-5210213 Msa1229500:CDS
AGAAGGAGTTGGGAAAAGCA+GGG 0.626374 8_2:+5210774 None:intergenic
GGATCATAAATATTATGAGG+CGG 0.629799 8_2:-5209764 Msa1229500:three_prime_UTR
TTAAAATCACATGACATGAG+TGG 0.637461 8_2:-5210052 Msa1229500:three_prime_UTR
AAGATCAGAATCAGTTGCAG+TGG 0.640103 8_2:-5210080 Msa1229500:CDS
TAGAATCTAGAATAGATACA+TGG 0.642392 8_2:-5209574 Msa1229500:three_prime_UTR
TAACAAGCTTGGAGGAAGTG+AGG 0.645660 8_2:+5210625 None:intergenic
ATGAAGATTCTGATAAAACA+AGG 0.650615 8_2:-5209961 Msa1229500:three_prime_UTR
GGACACCACATGATGATGAA+AGG 0.656135 8_2:+5209653 None:intergenic
AGATACATGGAATTATGACA+TGG 0.682329 8_2:-5209561 Msa1229500:three_prime_UTR
CTTTATGGAGAATCTAGATG+GGG 0.689450 8_2:-5209692 Msa1229500:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATGTAAAATAATTATT+TGG - chr8_2:5210010-5210029 Msa1229500:three_prime_UTR 10.0%
!! ATATGAGAAAAAAAATAAAA+AGG + chr8_2:5210525-5210544 None:intergenic 10.0%
!! TTTGATGTAAAATAATTATT+TGG - chr8_2:5210010-5210029 Msa1229500:three_prime_UTR 10.0%
!! ATATGAGAAAAAAAATAAAA+AGG + chr8_2:5210525-5210544 None:intergenic 10.0%
!!! AGAGAACTTTTTTAATTATT+TGG - chr8_2:5210039-5210058 Msa1229500:three_prime_UTR 15.0%
!! TTGAAAAAAAAATTATGAAG+TGG - chr8_2:5210332-5210351 Msa1229500:intron 15.0%
!!! AGAGAACTTTTTTAATTATT+TGG - chr8_2:5210039-5210058 Msa1229500:three_prime_UTR 15.0%
!! TTGAAAAAAAAATTATGAAG+TGG - chr8_2:5210332-5210351 Msa1229500:intron 15.0%
!!! TAATAAAACATGCTAGATTT+TGG + chr8_2:5209669-5209688 None:intergenic 20.0%
!!! AAATCTAGCATGTTTTATTA+TGG - chr8_2:5209669-5209688 Msa1229500:three_prime_UTR 20.0%
!! AAAGTATAAATATTCATCTG+GGG + chr8_2:5209839-5209858 None:intergenic 20.0%
!! CAAAGTATAAATATTCATCT+GGG + chr8_2:5209840-5209859 None:intergenic 20.0%
!! ACAAAGTATAAATATTCATC+TGG + chr8_2:5209841-5209860 None:intergenic 20.0%
!!! TTTACACTTAATTTTCATGT+AGG - chr8_2:5209861-5209880 Msa1229500:three_prime_UTR 20.0%
!!! TTATAATTGTGATTTTTCAG+AGG - chr8_2:5210098-5210117 Msa1229500:CDS 20.0%
!!! TATAATTGTGATTTTTCAGA+GGG - chr8_2:5210099-5210118 Msa1229500:CDS 20.0%
!! TCTCTTGTAAAAAAAATTGT+TGG - chr8_2:5210418-5210437 Msa1229500:intron 20.0%
!! ATAGAAAAAAAAACTCAACA+AGG - chr8_2:5210454-5210473 Msa1229500:intron 20.0%
!!! TTTTTTTTTCCCATAGAATT+TGG + chr8_2:5210556-5210575 None:intergenic 20.0%
!! ATTCTATGGGAAAAAAAAAA+TGG - chr8_2:5210557-5210576 Msa1229500:intron 20.0%
!! AATGGATCATAAATATTATG+AGG - chr8_2:5210575-5210594 Msa1229500:intron 20.0%
!!! TTTTTGTTGTCTCAATTTTA+TGG + chr8_2:5210613-5210632 None:intergenic 20.0%
!!! AAAGTATCAAAGATACTTTA+TGG - chr8_2:5210635-5210654 Msa1229500:CDS 20.0%
!!! GTATTTTTTATTCAAATCCA+TGG + chr8_2:5210713-5210732 None:intergenic 20.0%
!!! ATAGATTGAGAATTTTTCTA+CGG + chr8_2:5210742-5210761 None:intergenic 20.0%
!!! TAATAAAACATGCTAGATTT+TGG + chr8_2:5209669-5209688 None:intergenic 20.0%
!!! AAATCTAGCATGTTTTATTA+TGG - chr8_2:5209669-5209688 Msa1229500:three_prime_UTR 20.0%
!! AAAGTATAAATATTCATCTG+GGG + chr8_2:5209839-5209858 None:intergenic 20.0%
!! CAAAGTATAAATATTCATCT+GGG + chr8_2:5209840-5209859 None:intergenic 20.0%
!! ACAAAGTATAAATATTCATC+TGG + chr8_2:5209841-5209860 None:intergenic 20.0%
!!! TTTACACTTAATTTTCATGT+AGG - chr8_2:5209861-5209880 Msa1229500:three_prime_UTR 20.0%
!!! TTATAATTGTGATTTTTCAG+AGG - chr8_2:5210098-5210117 Msa1229500:CDS 20.0%
!!! TATAATTGTGATTTTTCAGA+GGG - chr8_2:5210099-5210118 Msa1229500:CDS 20.0%
!! TCTCTTGTAAAAAAAATTGT+TGG - chr8_2:5210418-5210437 Msa1229500:intron 20.0%
!! ATAGAAAAAAAAACTCAACA+AGG - chr8_2:5210454-5210473 Msa1229500:intron 20.0%
!!! TTTTTTTTTCCCATAGAATT+TGG + chr8_2:5210556-5210575 None:intergenic 20.0%
!! ATTCTATGGGAAAAAAAAAA+TGG - chr8_2:5210557-5210576 Msa1229500:intron 20.0%
!! AATGGATCATAAATATTATG+AGG - chr8_2:5210575-5210594 Msa1229500:intron 20.0%
!!! TTTTTGTTGTCTCAATTTTA+TGG + chr8_2:5210613-5210632 None:intergenic 20.0%
!!! AAAGTATCAAAGATACTTTA+TGG - chr8_2:5210635-5210654 Msa1229500:CDS 20.0%
!!! GTATTTTTTATTCAAATCCA+TGG + chr8_2:5210713-5210732 None:intergenic 20.0%
!!! ATAGATTGAGAATTTTTCTA+CGG + chr8_2:5210742-5210761 None:intergenic 20.0%
!!! ACATAAAGATGTCTTTGTTT+TGG + chr8_2:5209764-5209783 None:intergenic 25.0%
! AAAAAGATGAAGGAAAATTG+AGG + chr8_2:5209810-5209829 None:intergenic 25.0%
! ATTGTTTGAAGAATTCTGAT+TGG + chr8_2:5210234-5210253 None:intergenic 25.0%
! TCAGAATTCTTCAAACAATA+AGG - chr8_2:5210235-5210254 Msa1229500:intron 25.0%
!!! CATGTCATGTGATTTTAATT+AGG + chr8_2:5210288-5210307 None:intergenic 25.0%
!! TTTTATCAGAATCTTCATGA+TGG + chr8_2:5210379-5210398 None:intergenic 25.0%
! ATGAAGATTCTGATAAAACA+AGG - chr8_2:5210381-5210400 Msa1229500:intron 25.0%
!! AAAAACTCAACAAGGAATTT+TGG - chr8_2:5210462-5210481 Msa1229500:intron 25.0%
!! ATTTTCTCTTCCAAATTCTA+TGG - chr8_2:5210543-5210562 Msa1229500:intron 25.0%
!! TTTTCTCTTCCAAATTCTAT+GGG - chr8_2:5210544-5210563 Msa1229500:intron 25.0%
!! TAGAATCTAGAATAGATACA+TGG - chr8_2:5210768-5210787 Msa1229500:five_prime_UTR 25.0%
!!! ACATAAAGATGTCTTTGTTT+TGG + chr8_2:5209764-5209783 None:intergenic 25.0%
! AAAAAGATGAAGGAAAATTG+AGG + chr8_2:5209810-5209829 None:intergenic 25.0%
! ATTGTTTGAAGAATTCTGAT+TGG + chr8_2:5210234-5210253 None:intergenic 25.0%
! TCAGAATTCTTCAAACAATA+AGG - chr8_2:5210235-5210254 Msa1229500:intron 25.0%
!!! CATGTCATGTGATTTTAATT+AGG + chr8_2:5210288-5210307 None:intergenic 25.0%
!! TTTTATCAGAATCTTCATGA+TGG + chr8_2:5210379-5210398 None:intergenic 25.0%
! ATGAAGATTCTGATAAAACA+AGG - chr8_2:5210381-5210400 Msa1229500:intron 25.0%
!! AAAAACTCAACAAGGAATTT+TGG - chr8_2:5210462-5210481 Msa1229500:intron 25.0%
!! ATTTTCTCTTCCAAATTCTA+TGG - chr8_2:5210543-5210562 Msa1229500:intron 25.0%
!! TTTTCTCTTCCAAATTCTAT+GGG - chr8_2:5210544-5210563 Msa1229500:intron 25.0%
!! TAGAATCTAGAATAGATACA+TGG - chr8_2:5210768-5210787 Msa1229500:five_prime_UTR 25.0%
!! TCTAGCATGTTTTATTATGG+TGG - chr8_2:5209672-5209691 Msa1229500:three_prime_UTR 30.0%
TTCTACAAAGATAACAAGCT+TGG + chr8_2:5209731-5209750 None:intergenic 30.0%
TATCTTTGTAGAAAACCTCT+TGG - chr8_2:5209738-5209757 Msa1229500:three_prime_UTR 30.0%
ACAAAGACATCTTTATGTAC+AGG - chr8_2:5209766-5209785 Msa1229500:three_prime_UTR 30.0%
GTAGGTCATAACTCATAATA+AGG - chr8_2:5209879-5209898 Msa1229500:three_prime_UTR 30.0%
ATGAATCCAAAGAGAAAAGT+TGG - chr8_2:5210171-5210190 Msa1229500:CDS 30.0%
! AATCTTCCAACTTTTCTCTT+TGG + chr8_2:5210180-5210199 None:intergenic 30.0%
! AGAATTTCTAACACCTCTTT+TGG + chr8_2:5210207-5210226 None:intergenic 30.0%
TTAAAATCACATGACATGAG+TGG - chr8_2:5210290-5210309 Msa1229500:intron 30.0%
GGATCATAAATATTATGAGG+CGG - chr8_2:5210578-5210597 Msa1229500:CDS 30.0%
TACTTTATGGAGAATCTAGA+TGG - chr8_2:5210648-5210667 Msa1229500:CDS 30.0%
ACTTTATGGAGAATCTAGAT+GGG - chr8_2:5210649-5210668 Msa1229500:CDS 30.0%
AGATACATGGAATTATGACA+TGG - chr8_2:5210781-5210800 Msa1229500:five_prime_UTR 30.0%
!! TCTAGCATGTTTTATTATGG+TGG - chr8_2:5209672-5209691 Msa1229500:three_prime_UTR 30.0%
TTCTACAAAGATAACAAGCT+TGG + chr8_2:5209731-5209750 None:intergenic 30.0%
TATCTTTGTAGAAAACCTCT+TGG - chr8_2:5209738-5209757 Msa1229500:three_prime_UTR 30.0%
ACAAAGACATCTTTATGTAC+AGG - chr8_2:5209766-5209785 Msa1229500:three_prime_UTR 30.0%
GTAGGTCATAACTCATAATA+AGG - chr8_2:5209879-5209898 Msa1229500:three_prime_UTR 30.0%
ATGAATCCAAAGAGAAAAGT+TGG - chr8_2:5210171-5210190 Msa1229500:CDS 30.0%
! AATCTTCCAACTTTTCTCTT+TGG + chr8_2:5210180-5210199 None:intergenic 30.0%
! AGAATTTCTAACACCTCTTT+TGG + chr8_2:5210207-5210226 None:intergenic 30.0%
TTAAAATCACATGACATGAG+TGG - chr8_2:5210290-5210309 Msa1229500:intron 30.0%
GGATCATAAATATTATGAGG+CGG - chr8_2:5210578-5210597 Msa1229500:CDS 30.0%
TACTTTATGGAGAATCTAGA+TGG - chr8_2:5210648-5210667 Msa1229500:CDS 30.0%
ACTTTATGGAGAATCTAGAT+GGG - chr8_2:5210649-5210668 Msa1229500:CDS 30.0%
AGATACATGGAATTATGACA+TGG - chr8_2:5210781-5210800 Msa1229500:five_prime_UTR 30.0%
AAAGAATAGTTAGCAGCCAT+TGG + chr8_2:5209612-5209631 None:intergenic 35.0%
!! ACATGCTAGATTTTGGAGAA+GGG + chr8_2:5209662-5209681 None:intergenic 35.0%
!! AACATGCTAGATTTTGGAGA+AGG + chr8_2:5209663-5209682 None:intergenic 35.0%
TACAAAGATAACAAGCTTGG+AGG + chr8_2:5209728-5209747 None:intergenic 35.0%
TGGAAGATTTCAACCAAAAG+AGG - chr8_2:5210191-5210210 Msa1229500:CDS 35.0%
CTTTATGGAGAATCTAGATG+GGG - chr8_2:5210650-5210669 Msa1229500:CDS 35.0%
TACATCCTTTCATCATCATG+TGG - chr8_2:5210684-5210703 Msa1229500:CDS 35.0%
AAAGAATAGTTAGCAGCCAT+TGG + chr8_2:5209612-5209631 None:intergenic 35.0%
!! ACATGCTAGATTTTGGAGAA+GGG + chr8_2:5209662-5209681 None:intergenic 35.0%
!! AACATGCTAGATTTTGGAGA+AGG + chr8_2:5209663-5209682 None:intergenic 35.0%
TACAAAGATAACAAGCTTGG+AGG + chr8_2:5209728-5209747 None:intergenic 35.0%
TGGAAGATTTCAACCAAAAG+AGG - chr8_2:5210191-5210210 Msa1229500:CDS 35.0%
CTTTATGGAGAATCTAGATG+GGG - chr8_2:5210650-5210669 Msa1229500:CDS 35.0%
TACATCCTTTCATCATCATG+TGG - chr8_2:5210684-5210703 Msa1229500:CDS 35.0%
!!! ATGTCTTTGTTTTGGCCAAG+AGG + chr8_2:5209756-5209775 None:intergenic 40.0%
AAGATCAGAATCAGTTGCAG+TGG - chr8_2:5210262-5210281 Msa1229500:intron 40.0%
!!! ATGTCTTTGTTTTGGCCAAG+AGG + chr8_2:5209756-5209775 None:intergenic 40.0%
AAGATCAGAATCAGTTGCAG+TGG - chr8_2:5210262-5210281 Msa1229500:intron 40.0%
AGAAGGAGTTGGGAAAAGCA+GGG + chr8_2:5209571-5209590 None:intergenic 45.0%
AGAGATGGAGAGAAGGAGTT+GGG + chr8_2:5209581-5209600 None:intergenic 45.0%
! TGAGTTGAGAGATGGAGAGA+AGG + chr8_2:5209588-5209607 None:intergenic 45.0%
!! CCATTGGTTGAGTTGAGAGA+TGG + chr8_2:5209596-5209615 None:intergenic 45.0%
CCATCTCTCAACTCAACCAA+TGG - chr8_2:5209593-5209612 Msa1229500:three_prime_UTR 45.0%
GGAGAAGGGATTGAAGAAGA+TGG + chr8_2:5209648-5209667 None:intergenic 45.0%
TAACAAGCTTGGAGGAAGTG+AGG + chr8_2:5209720-5209739 None:intergenic 45.0%
GGGGTGTGACAAAAAGATGA+AGG + chr8_2:5209820-5209839 None:intergenic 45.0%
CTGCACTCATTGCTACAGAA+TGG + chr8_2:5210131-5210150 None:intergenic 45.0%
CATTCTGTAGCAATGAGTGC+AGG - chr8_2:5210129-5210148 Msa1229500:CDS 45.0%
! GGACACCACATGATGATGAA+AGG + chr8_2:5210692-5210711 None:intergenic 45.0%
TCATCATCATGTGGTGTCCA+TGG - chr8_2:5210693-5210712 Msa1229500:CDS 45.0%
AGAAGGAGTTGGGAAAAGCA+GGG + chr8_2:5209571-5209590 None:intergenic 45.0%
AGAGATGGAGAGAAGGAGTT+GGG + chr8_2:5209581-5209600 None:intergenic 45.0%
! TGAGTTGAGAGATGGAGAGA+AGG + chr8_2:5209588-5209607 None:intergenic 45.0%
!! CCATTGGTTGAGTTGAGAGA+TGG + chr8_2:5209596-5209615 None:intergenic 45.0%
CCATCTCTCAACTCAACCAA+TGG - chr8_2:5209593-5209612 Msa1229500:three_prime_UTR 45.0%
GGAGAAGGGATTGAAGAAGA+TGG + chr8_2:5209648-5209667 None:intergenic 45.0%
TAACAAGCTTGGAGGAAGTG+AGG + chr8_2:5209720-5209739 None:intergenic 45.0%
GGGGTGTGACAAAAAGATGA+AGG + chr8_2:5209820-5209839 None:intergenic 45.0%
CTGCACTCATTGCTACAGAA+TGG + chr8_2:5210131-5210150 None:intergenic 45.0%
CATTCTGTAGCAATGAGTGC+AGG - chr8_2:5210129-5210148 Msa1229500:CDS 45.0%
! GGACACCACATGATGATGAA+AGG + chr8_2:5210692-5210711 None:intergenic 45.0%
TCATCATCATGTGGTGTCCA+TGG - chr8_2:5210693-5210712 Msa1229500:CDS 45.0%
GAGAAGGAGTTGGGAAAAGC+AGG + chr8_2:5209572-5209591 None:intergenic 50.0%
GAGAGATGGAGAGAAGGAGT+TGG + chr8_2:5209582-5209601 None:intergenic 50.0%
GAGAAGGAGTTGGGAAAAGC+AGG + chr8_2:5209572-5209591 None:intergenic 50.0%
GAGAGATGGAGAGAAGGAGT+TGG + chr8_2:5209582-5209601 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 5209559 5210805 5209559 ID=Msa1229500;Name=Msa1229500
chr8_2 mRNA 5209559 5210805 5209559 ID=Msa1229500-mRNA-1;Parent=Msa1229500;Name=Msa1229500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=53|1|1|1|1|1|2|516|115
chr8_2 exon 5209559 5210246 5209559 ID=Msa1229500-mRNA-1:exon:1799;Parent=Msa1229500-mRNA-1
chr8_2 exon 5210577 5210805 5210577 ID=Msa1229500-mRNA-1:exon:1798;Parent=Msa1229500-mRNA-1
chr8_2 five_prime_UTR 5210753 5210805 5210753 ID=Msa1229500-mRNA-1:five_prime_utr;Parent=Msa1229500-mRNA-1
chr8_2 CDS 5210577 5210752 5210577 ID=Msa1229500-mRNA-1:cds;Parent=Msa1229500-mRNA-1
chr8_2 CDS 5210075 5210246 5210075 ID=Msa1229500-mRNA-1:cds;Parent=Msa1229500-mRNA-1
chr8_2 three_prime_UTR 5209559 5210074 5209559 ID=Msa1229500-mRNA-1:three_prime_utr;Parent=Msa1229500-mRNA-1
Gene Sequence

>Msa1229500

ATGGCTGCTAACTATTCTTTCTCTTCTTCATCACCATCTTCTTCAATCCCTTCTCCAAAATCTAGCATGTTTTATTATGGTGGAAGTGAAGATTTCTATGATGAACCTCACTTCCTCCAAGCTTGTTATCTTTGTAGAAAACCTCTTGGCCAAAACAAAGACATCTTTATGTACAGAGGGAACACACCATTCTGTAGCAATGAGTGCAGGCAAGAACAAATAGAGATTGATGAATCCAAAGAGAAAAGTTGGAAGATTTCAACCAAAAGAGGTGTTAGAAATTCTGAAACCAATCAGAATTCTTCAAACAATAAGGCTGTAAGATCAGAATCAGTTGCAGTGGCCTAA

Protein sequence

>Msa1229500

MAANYSFSSSSPSSSIPSPKSSMFYYGGSEDFYDEPHFLQACYLCRKPLGQNKDIFMYRGNTPFCSNECRQEQIEIDESKEKSWKISTKRGVRNSETNQNSSNNKAVRSESVAVA*