AlfalfaGEDB | Msa0173710

M. sativa cultivar zhongmu-4 / Msa0173710

KEGG: K14484
GO: GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009642 GO:0009646 GO:0009647 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010262 GO:0010468 GO:0010556 GO:0010588 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141
PFAM: PF02309.19

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173710	sp\|Q9M1R4\|IAA30_ARATH	49.057	159	66	5	20	171	19	169	1.50e-37	130

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173710	A0A072VP23	98.295	176	3	0	1	176	1	176	7.10e-127	363

TFs/TRs:

Gene ID	Type	Classification
Msa0173710	TR	AUX/IAA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0014570	Msa0173710	0.805069	1.594960e-49	-8.615850e-47
Msa0035040	Msa0173710	0.909512	5.247437e-82	-8.615850e-47
Msa0039250	Msa0173710	0.810968	8.851268e-51	-8.615850e-47
Msa0081420	Msa0173710	0.811905	5.541424e-51	-8.615850e-47
Msa0093850	Msa0173710	0.806302	8.785627e-50	-8.615850e-47
Msa0133720	Msa0173710	0.811419	7.067019e-51	-8.615850e-47
Msa0133820	Msa0173710	0.807247	5.549171e-50	-8.615850e-47
Msa0154440	Msa0173710	0.808597	2.864682e-50	-8.615850e-47
Msa0173710	Msa0181230	0.831371	1.734196e-55	-8.615850e-47
Msa0173710	Msa0300320	0.812669	3.774821e-51	-8.615850e-47
Msa0173710	Msa0341690	0.814148	1.785778e-51	-8.615850e-47
Msa0173710	Msa0372810	0.802408	5.689837e-49	-8.615850e-47
Msa0173710	Msa0474730	0.800127	1.667433e-48	-8.615850e-47
Msa0173710	Msa0479200	0.833503	5.138914e-56	-8.615850e-47
Msa0173710	Msa0556010	0.841519	4.523159e-58	-8.615850e-47
Msa0173710	Msa0581690	0.811254	7.674404e-51	-8.615850e-47
Msa0173710	Msa1208160	0.801368	9.306234e-49	-8.615850e-47
Msa0173710	Msa1219000	0.802676	5.010877e-49	-8.615850e-47
Msa0173710	Msa1375460	0.918120	2.303928e-86	-8.615850e-47
Msa0173710	Msa1383530	0.808408	3.143746e-50	-8.615850e-47
Msa0173710	Msa1423350	0.800136	1.660104e-48	-8.615850e-47
Msa0173710	Msa1440310	0.807836	4.161223e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173710	MtrunA17_Chr1g0193861	98.295	176	3	0	1	176	1	176	1.37e-130	363
Msa0173710	MtrunA17_Chr7g0270851	66.102	177	41	5	1	175	1	160	1.48e-68	205
Msa0173710	MtrunA17_Chr4g0069561	53.676	136	56	2	41	173	52	183	4.80e-38	129
Msa0173710	MtrunA17_Chr1g0183251	50.909	110	36	4	85	176	147	256	5.65e-24	94.7
Msa0173710	MtrunA17_Chr1g0184801	38.650	163	79	6	16	176	58	201	1.66e-22	89.4
Msa0173710	MtrunA17_Chr1g0166011	33.714	175	91	5	9	176	26	182	1.81e-21	86.3
Msa0173710	MtrunA17_Chr7g0260621	41.880	117	62	4	64	176	87	201	2.41e-20	84.0
Msa0173710	MtrunA17_Chr1g0187961	44.944	89	48	1	82	170	84	171	2.50e-20	83.2
Msa0173710	MtrunA17_Chr5g0411501	42.727	110	48	3	82	176	214	323	1.17e-18	81.6
Msa0173710	MtrunA17_Chr6g0486121	36.232	138	63	4	64	176	105	242	2.88e-18	79.3
Msa0173710	MtrunA17_Chr5g0428141	42.453	106	49	3	83	176	230	335	3.06e-18	80.5
Msa0173710	MtrunA17_Chr2g0330951	36.066	122	52	4	78	176	142	260	4.42e-18	79.0
Msa0173710	MtrunA17_Chr1g0184791	38.938	113	55	2	78	176	121	233	5.64e-18	78.6
Msa0173710	MtrunA17_Chr8g0366881	42.727	110	48	4	82	176	227	336	9.17e-18	79.3
Msa0173710	MtrunA17_Chr1g0187921	40.708	113	52	4	78	176	113	224	3.41e-17	76.3
Msa0173710	MtrunA17_Chr8g0390281	38.333	120	52	3	76	176	165	281	3.46e-17	77.0
Msa0173710	MtrunA17_Chr7g0260641	37.273	110	56	2	80	176	129	238	4.03e-17	76.3
Msa0173710	MtrunA17_Chr8g0340731	33.333	108	57	1	78	170	150	257	5.95e-17	76.3
Msa0173710	MtrunA17_Chr2g0331411	38.532	109	52	2	83	176	206	314	1.08e-16	75.9
Msa0173710	MtrunA17_Chr1g0190711	40.000	105	50	4	85	176	137	241	8.09e-16	72.8
Msa0173710	MtrunA17_Chr4g0004181	47.475	99	45	4	82	176	73	168	9.87e-16	71.2
Msa0173710	MtrunA17_Chr1g0209181	40.449	89	51	1	85	173	85	171	1.45e-14	68.2
Msa0173710	MtrunA17_Chr2g0332141	34.783	92	52	1	85	168	8	99	4.48e-14	65.5
Msa0173710	MtrunA17_Chr7g0239061	36.364	88	49	1	81	168	568	648	1.91e-13	67.4
Msa0173710	MtrunA17_Chr4g0064131	32.773	119	59	4	64	170	96	205	5.28e-13	64.3
Msa0173710	MtrunA17_Chr2g0276781	33.010	103	55	3	66	168	538	626	9.17e-12	62.8
Msa0173710	MtrunA17_Chr8g0385791	31.250	112	61	4	59	168	692	789	3.38e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173710	AT3G62100.1	49.057	159	66	5	20	171	19	169	1.52e-38	130
Msa0173710	AT2G46990.1	46.259	147	67	4	36	172	28	172	4.17e-35	121
Msa0173710	AT3G17600.1	44.366	142	60	5	42	174	27	158	1.96e-32	114
Msa0173710	AT3G62100.2	46.207	145	63	5	20	157	19	155	1.03e-29	107
Msa0173710	AT2G46990.2	43.939	132	62	4	36	157	28	157	9.86e-27	99.4
Msa0173710	AT5G25890.1	46.809	94	42	2	84	176	81	167	2.80e-24	93.6
Msa0173710	AT4G28640.3	47.664	107	45	3	75	170	128	234	1.87e-23	93.6
Msa0173710	AT4G28640.1	47.664	107	45	3	75	170	128	234	1.96e-23	93.2
Msa0173710	AT4G28640.2	47.664	107	45	3	75	170	128	234	1.23e-22	92.0
Msa0173710	AT1G04550.2	51.111	90	37	2	85	168	126	214	6.04e-22	89.4
Msa0173710	AT2G33310.2	47.525	101	44	3	85	176	131	231	4.30e-21	87.0
Msa0173710	AT2G33310.3	47.525	101	44	3	85	176	130	230	4.64e-21	87.0
Msa0173710	AT2G33310.1	47.525	101	44	3	85	176	130	230	4.64e-21	87.0
Msa0173710	AT3G16500.1	37.288	118	56	2	71	170	132	249	1.58e-20	85.9
Msa0173710	AT3G16500.2	37.288	118	56	2	71	170	132	249	2.06e-20	85.5
Msa0173710	AT1G51950.1	41.000	100	48	2	83	171	149	248	3.66e-20	85.1
Msa0173710	AT5G65670.2	42.202	109	48	2	83	176	216	324	5.60e-20	85.5
Msa0173710	AT5G65670.1	42.202	109	48	2	83	176	216	324	6.01e-20	85.5
Msa0173710	AT1G04240.1	44.211	95	51	2	83	176	92	185	1.41e-19	82.0
Msa0173710	AT3G23030.1	41.121	107	56	2	64	170	64	163	2.32e-19	80.9
Msa0173710	AT1G04240.2	44.211	95	51	2	83	176	192	285	5.76e-19	82.0
Msa0173710	AT3G23030.2	41.121	107	56	2	64	170	151	250	8.87e-19	81.3
Msa0173710	AT5G43700.1	46.512	86	45	1	85	170	90	174	1.96e-18	79.0
Msa0173710	AT1G52830.1	38.793	116	65	4	64	176	74	186	5.56e-18	77.8
Msa0173710	AT4G29080.1	39.450	109	51	3	83	176	185	293	8.02e-18	79.3
Msa0173710	AT4G14560.1	44.186	86	47	1	85	170	76	160	1.43e-17	76.3
Msa0173710	AT3G15540.1	43.011	93	50	2	85	176	98	188	1.05e-16	74.3
Msa0173710	AT1G15050.2	35.606	132	67	4	42	170	29	145	1.61e-16	72.8
Msa0173710	AT1G15050.1	35.606	132	67	4	42	170	61	177	2.34e-16	73.2
Msa0173710	AT2G22670.5	39.815	108	50	3	84	176	200	307	3.62e-16	74.7
Msa0173710	AT2G22670.2	39.815	108	50	3	84	176	200	307	3.62e-16	74.7
Msa0173710	AT2G22670.3	39.815	108	50	3	84	176	200	307	3.75e-16	74.7
Msa0173710	AT2G22670.1	39.815	108	50	3	84	176	200	307	3.75e-16	74.7
Msa0173710	AT2G22670.4	39.450	109	51	3	83	176	216	324	4.03e-16	75.1
Msa0173710	AT4G14550.1	32.847	137	68	6	64	176	80	216	2.08e-15	71.6
Msa0173710	AT1G04250.1	40.367	109	51	4	82	176	109	217	2.41e-15	71.6
Msa0173710	AT4G14550.2	32.847	137	68	6	64	176	80	216	3.02e-15	71.2
Msa0173710	AT1G04100.1	37.864	103	50	2	82	170	150	252	3.60e-15	71.6
Msa0173710	AT3G04730.1	37.143	105	53	2	85	176	120	224	8.50e-15	70.1
Msa0173710	AT3G23050.1	37.143	105	53	4	85	176	126	230	1.55e-14	69.3
Msa0173710	AT1G15580.1	39.535	86	48	2	85	170	76	157	6.11e-14	66.2
Msa0173710	AT4G23980.2	34.615	104	61	2	65	168	503	599	2.22e-12	64.7
Msa0173710	AT4G23980.1	34.615	104	61	2	65	168	505	601	2.24e-12	64.7
Msa0173710	AT2G01200.2	35.644	101	63	1	70	170	85	183	1.28e-11	60.8
Msa0173710	AT2G01200.1	35.644	101	63	1	70	170	85	183	1.28e-11	60.8
Msa0173710	AT4G32280.2	36.782	87	47	2	85	170	119	198	3.87e-11	59.7
Msa0173710	AT4G32280.1	36.782	87	47	2	85	170	161	240	7.91e-11	59.3

Find 59 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGTGGAATTGTAGAATT+TGG	0.173695	1_4:-59079642	None:intergenic
TTCACTTCTCTAATTTAAAA+TGG	0.180789	1_4:-59081107	None:intergenic
TAAAATGGACCTAATCTTAA+AGG	0.200614	1_4:-59081092	None:intergenic
TCTTTATTATTTAAACCTTA+AGG	0.333508	1_4:+59079578	Msa0173710:five_prime_UTR
TCACCGCCTTGTTGCTGAAT+TGG	0.337037	1_4:-59079939	None:intergenic
TTGCAAAGTCCTTTAAGATT+AGG	0.337977	1_4:+59081083	Msa0173710:three_prime_UTR
AAGAATAAGCCGCCACCTTA+AGG	0.358276	1_4:-59079593	None:intergenic
CTCAATTTGCTAGCTCATAA+TGG	0.373904	1_4:+59080038	Msa0173710:CDS
TCACAAGGGTTGATGCATTC+GGG	0.385803	1_4:+59080853	Msa0173710:CDS
TACTCTTTAGATTATGTTTG+AGG	0.388933	1_4:+59080970	Msa0173710:three_prime_UTR
TGCAGAAGGAGACTTGATTA+TGG	0.392903	1_4:+59080269	Msa0173710:CDS
ATCACAAGGGTTGATGCATT+CGG	0.400585	1_4:+59080852	Msa0173710:CDS
TACATGGAAGGCATTCCAAT+TGG	0.410476	1_4:+59080008	Msa0173710:CDS
AAGGAGACTTGATTATGGTT+GGG	0.414355	1_4:+59080274	Msa0173710:CDS
TATGGTTGGGGATGTCCCTT+GGG	0.419336	1_4:+59080287	Msa0173710:CDS
AAATTGAGCTTTCTCCCAAT+TGG	0.430798	1_4:-59080023	None:intergenic
TTATGGTTGGGGATGTCCCT+TGG	0.433671	1_4:+59080286	Msa0173710:CDS
TACAATTCCACAATGGGAAA+AGG	0.446881	1_4:+59079650	Msa0173710:exon
AGAGAACAAAATCAAAATGA+AGG	0.451318	1_4:+59081017	Msa0173710:three_prime_UTR
AAATTTAAATATTCAAATGA+AGG	0.453913	1_4:-59081060	None:intergenic
CCTTCTTCTACTGTTGGAAG+AGG	0.459161	1_4:-59079690	None:intergenic
GAAGGAGACTTGATTATGGT+TGG	0.467457	1_4:+59080273	Msa0173710:CDS
ACATGGAAGGCATTCCAATT+GGG	0.472520	1_4:+59080009	Msa0173710:CDS
GGAAGAGGAGGAAGAAGAAG+TGG	0.473631	1_4:-59079675	None:intergenic
AAATTCTACAATTCCACAAT+GGG	0.475764	1_4:+59079644	Msa0173710:exon
GATAGAGGATGAAACATTAG+AGG	0.481392	1_4:-59079723	None:intergenic
AGGAGACTTGATTATGGTTG+GGG	0.490396	1_4:+59080275	Msa0173710:CDS
CTTCTTTGTGAAGGTTTACA+TGG	0.492048	1_4:+59079992	Msa0173710:CDS
AAAGAAAGAAAGAATTGAAG+AGG	0.500027	1_4:-59079552	None:intergenic
CTCAATCCAAGGTTAAGATC+AGG	0.506435	1_4:-59079779	None:intergenic
CATGTAAACCTTCACAAAGA+AGG	0.519682	1_4:-59079991	None:intergenic
TTTGTGAAGGTTTACATGGA+AGG	0.523480	1_4:+59079996	Msa0173710:CDS
ATGTTTCCTTCTTCTACTGT+TGG	0.532208	1_4:-59079696	None:intergenic
TTTGTCATATTAGGGGACAT+TGG	0.532866	1_4:+59079913	Msa0173710:intron
TTATTTAAACCTTAAGGTGG+CGG	0.534814	1_4:+59079584	Msa0173710:five_prime_UTR
CCTCTTCCAACAGTAGAAGA+AGG	0.535777	1_4:+59079690	Msa0173710:CDS
GTTAACACATGACATCTCTC+TGG	0.536944	1_4:-59080237	None:intergenic
GTAATGGCCCTTACATAGAA+TGG	0.537441	1_4:-59080105	None:intergenic
TATGTTTGAGGACTAGCAAA+GGG	0.538199	1_4:+59080982	Msa0173710:three_prime_UTR
GTTAAGTAAACTTACTCCCA+AGG	0.550745	1_4:-59080303	None:intergenic
TTCTTTAACATACCTTGAGG+TGG	0.555886	1_4:-59079834	None:intergenic
TCTTCTACTGTTGGAAGAGG+AGG	0.561746	1_4:-59079687	None:intergenic
CAACAGTGCCTTCTTTGTGA+AGG	0.564852	1_4:+59079983	Msa0173710:CDS
TCATAATGGCTATCATGAGT+TGG	0.572244	1_4:+59080052	Msa0173710:CDS
ATCAACATATTGTTGAGTGG+TGG	0.579143	1_4:-59079807	None:intergenic
CAAATTCTACAATTCCACAA+TGG	0.580800	1_4:+59079643	Msa0173710:exon
TTATTATTTAAACCTTAAGG+TGG	0.581557	1_4:+59079581	Msa0173710:five_prime_UTR
ATGTTGATTATTCCACCTCA+AGG	0.585626	1_4:+59079822	Msa0173710:CDS
TGTTCTTATCATCTGTGAAG+AGG	0.588185	1_4:+59080823	Msa0173710:CDS
GAGAACAAAATCAAAATGAA+GGG	0.593834	1_4:+59081018	Msa0173710:three_prime_UTR
TTATGTTTGAGGACTAGCAA+AGG	0.602533	1_4:+59080981	Msa0173710:three_prime_UTR
TTAAGTAAACTTACTCCCAA+GGG	0.604202	1_4:-59080302	None:intergenic
TGAAGAGGTTGAAGATCACA+AGG	0.619538	1_4:+59080838	Msa0173710:CDS
TGGTGGAAATGCTCAATCCA+AGG	0.621212	1_4:-59079790	None:intergenic
TTAACTTATGAAGATGCAGA+AGG	0.627924	1_4:+59080255	Msa0173710:CDS
TGGCAACCAATTCAGCAACA+AGG	0.686483	1_4:+59079933	Msa0173710:CDS
ATAATCAACATATTGTTGAG+TGG	0.703279	1_4:-59079810	None:intergenic
CAACCAATTCAGCAACAAGG+CGG	0.746050	1_4:+59079936	Msa0173710:CDS
GAAGAGGTTGAAGATCACAA+GGG	0.757105	1_4:+59080839	Msa0173710:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATCAATTAATTTACAAAAT+TGG	-	chr1_4:59080776-59080795	None:intergenic	10.0%
!!!	ATTTTGTAAATTAATTGATT+TGG	+	chr1_4:59080776-59080795	Msa0173710:intron	10.0%
!!	AAATTTAAATATTCAAATGA+AGG	-	chr1_4:59081063-59081082	None:intergenic	10.0%
!!	AATCAATTAATTTACAAAAT+TGG	-	chr1_4:59080776-59080795	None:intergenic	10.0%
!!!	ATTTTGTAAATTAATTGATT+TGG	+	chr1_4:59080776-59080795	Msa0173710:intron	10.0%
!!	AAATTTAAATATTCAAATGA+AGG	-	chr1_4:59081063-59081082	None:intergenic	10.0%
!!	TCTTTATTATTTAAACCTTA+AGG	+	chr1_4:59079578-59079597	Msa0173710:five_prime_UTR	15.0%
!!!	ATTTTTACTTCTTTTTTTGT+TGG	+	chr1_4:59080141-59080160	Msa0173710:intron	15.0%
!!	TCTTTATTATTTAAACCTTA+AGG	+	chr1_4:59079578-59079597	Msa0173710:five_prime_UTR	15.0%
!!!	ATTTTTACTTCTTTTTTTGT+TGG	+	chr1_4:59080141-59080160	Msa0173710:intron	15.0%
!!	TTATTATTTAAACCTTAAGG+TGG	+	chr1_4:59079581-59079600	Msa0173710:five_prime_UTR	20.0%
!!!	ATTGTGTTATTTGTCATATT+AGG	+	chr1_4:59079904-59079923	Msa0173710:intron	20.0%
!!!	TTGTGTTATTTGTCATATTA+GGG	+	chr1_4:59079905-59079924	Msa0173710:intron	20.0%
!!	AAGTAAAAATGCATATATGA+GGG	-	chr1_4:59080131-59080150	None:intergenic	20.0%
!!	AATTCACTTAGAATTGAAAT+GGG	-	chr1_4:59080350-59080369	None:intergenic	20.0%
!!	AAATTCACTTAGAATTGAAA+TGG	-	chr1_4:59080351-59080370	None:intergenic	20.0%
!!	ATTTCAATTCTAAGTGAATT+TGG	+	chr1_4:59080350-59080369	Msa0173710:intron	20.0%
!!!	TTGATTTGGTACAATTTTTT+TGG	+	chr1_4:59080790-59080809	Msa0173710:intron	20.0%
!!	TTCACTTCTCTAATTTAAAA+TGG	-	chr1_4:59081110-59081129	None:intergenic	20.0%
!!	TTATTATTTAAACCTTAAGG+TGG	+	chr1_4:59079581-59079600	Msa0173710:five_prime_UTR	20.0%
!!!	ATTGTGTTATTTGTCATATT+AGG	+	chr1_4:59079904-59079923	Msa0173710:intron	20.0%
!!!	TTGTGTTATTTGTCATATTA+GGG	+	chr1_4:59079905-59079924	Msa0173710:intron	20.0%
!!	AAGTAAAAATGCATATATGA+GGG	-	chr1_4:59080131-59080150	None:intergenic	20.0%
!!	AATTCACTTAGAATTGAAAT+GGG	-	chr1_4:59080350-59080369	None:intergenic	20.0%
!!	AAATTCACTTAGAATTGAAA+TGG	-	chr1_4:59080351-59080370	None:intergenic	20.0%
!!	ATTTCAATTCTAAGTGAATT+TGG	+	chr1_4:59080350-59080369	Msa0173710:intron	20.0%
!!!	TTGATTTGGTACAATTTTTT+TGG	+	chr1_4:59080790-59080809	Msa0173710:intron	20.0%
!!	TTCACTTCTCTAATTTAAAA+TGG	-	chr1_4:59081110-59081129	None:intergenic	20.0%
!	AAAGAAAGAAAGAATTGAAG+AGG	-	chr1_4:59079555-59079574	None:intergenic	25.0%
!	AAATTCTACAATTCCACAAT+GGG	+	chr1_4:59079644-59079663	Msa0173710:exon	25.0%
!	ATAATCAACATATTGTTGAG+TGG	-	chr1_4:59079813-59079832	None:intergenic	25.0%
!!	TTTTTCTTTAACATACCTTG+AGG	-	chr1_4:59079840-59079859	None:intergenic	25.0%
!!!	TGTGTTATTTGTCATATTAG+GGG	+	chr1_4:59079906-59079925	Msa0173710:intron	25.0%
!	AGTAAAAATGCATATATGAG+GGG	-	chr1_4:59080130-59080149	None:intergenic	25.0%
!	GAAGTAAAAATGCATATATG+AGG	-	chr1_4:59080132-59080151	None:intergenic	25.0%
!!	TGTTGGTAAAATGAGTAATA+TGG	+	chr1_4:59080158-59080177	Msa0173710:intron	25.0%
!!	AAGTGAATTTGGCATAATTT+TGG	+	chr1_4:59080361-59080380	Msa0173710:intron	25.0%
!!!	ATTTTGACACAAGTTACATT+CGG	+	chr1_4:59080644-59080663	Msa0173710:intron	25.0%
!!	TTTATGGTAACTGTGATTTT+CGG	-	chr1_4:59080698-59080717	None:intergenic	25.0%
!	TACTCTTTAGATTATGTTTG+AGG	+	chr1_4:59080970-59080989	Msa0173710:three_prime_UTR	25.0%
!	AGAGAACAAAATCAAAATGA+AGG	+	chr1_4:59081017-59081036	Msa0173710:three_prime_UTR	25.0%
!	GAGAACAAAATCAAAATGAA+GGG	+	chr1_4:59081018-59081037	Msa0173710:three_prime_UTR	25.0%
!	TAAAATGGACCTAATCTTAA+AGG	-	chr1_4:59081095-59081114	None:intergenic	25.0%
!	AAAGAAAGAAAGAATTGAAG+AGG	-	chr1_4:59079555-59079574	None:intergenic	25.0%
!	AAATTCTACAATTCCACAAT+GGG	+	chr1_4:59079644-59079663	Msa0173710:exon	25.0%
!	ATAATCAACATATTGTTGAG+TGG	-	chr1_4:59079813-59079832	None:intergenic	25.0%
!!	TTTTTCTTTAACATACCTTG+AGG	-	chr1_4:59079840-59079859	None:intergenic	25.0%
!!!	TGTGTTATTTGTCATATTAG+GGG	+	chr1_4:59079906-59079925	Msa0173710:intron	25.0%
!	AGTAAAAATGCATATATGAG+GGG	-	chr1_4:59080130-59080149	None:intergenic	25.0%
!	GAAGTAAAAATGCATATATG+AGG	-	chr1_4:59080132-59080151	None:intergenic	25.0%
!!	TGTTGGTAAAATGAGTAATA+TGG	+	chr1_4:59080158-59080177	Msa0173710:intron	25.0%
!!	AAGTGAATTTGGCATAATTT+TGG	+	chr1_4:59080361-59080380	Msa0173710:intron	25.0%
!!!	ATTTTGACACAAGTTACATT+CGG	+	chr1_4:59080644-59080663	Msa0173710:intron	25.0%
!!	TTTATGGTAACTGTGATTTT+CGG	-	chr1_4:59080698-59080717	None:intergenic	25.0%
!	TACTCTTTAGATTATGTTTG+AGG	+	chr1_4:59080970-59080989	Msa0173710:three_prime_UTR	25.0%
!	AGAGAACAAAATCAAAATGA+AGG	+	chr1_4:59081017-59081036	Msa0173710:three_prime_UTR	25.0%
!	GAGAACAAAATCAAAATGAA+GGG	+	chr1_4:59081018-59081037	Msa0173710:three_prime_UTR	25.0%
!	TAAAATGGACCTAATCTTAA+AGG	-	chr1_4:59081095-59081114	None:intergenic	25.0%
!	AGCAAGAAAAAAGAGTATGA+TGG	+	chr1_4:59079503-59079522	Msa0173710:five_prime_UTR	30.0%
!	GCAAGAAAAAAGAGTATGAT+GGG	+	chr1_4:59079504-59079523	Msa0173710:five_prime_UTR	30.0%
	TTATTTAAACCTTAAGGTGG+CGG	+	chr1_4:59079584-59079603	Msa0173710:five_prime_UTR	30.0%
	CATTGTGGAATTGTAGAATT+TGG	-	chr1_4:59079645-59079664	None:intergenic	30.0%
	CAAATTCTACAATTCCACAA+TGG	+	chr1_4:59079643-59079662	Msa0173710:exon	30.0%
	GACACAAACATAGTAGTTTA+AGG	-	chr1_4:59079869-59079888	None:intergenic	30.0%
	TTAACTTATGAAGATGCAGA+AGG	+	chr1_4:59080255-59080274	Msa0173710:CDS	30.0%
	TTAAGTAAACTTACTCCCAA+GGG	-	chr1_4:59080305-59080324	None:intergenic	30.0%
!!	TGGCATAATTTTGGTATGTT+AGG	+	chr1_4:59080370-59080389	Msa0173710:intron	30.0%
!!	GGCATAATTTTGGTATGTTA+GGG	+	chr1_4:59080371-59080390	Msa0173710:intron	30.0%
	TTGTGTCAAAATCACACTAA+GGG	-	chr1_4:59080636-59080655	None:intergenic	30.0%
	CGATGAGTTTGGTAAATTTA+TGG	-	chr1_4:59080714-59080733	None:intergenic	30.0%
!!!	TACAATTTTTTTGGCCATGT+AGG	+	chr1_4:59080799-59080818	Msa0173710:intron	30.0%
!!	TTGCAAAGTCCTTTAAGATT+AGG	+	chr1_4:59081083-59081102	Msa0173710:three_prime_UTR	30.0%
!!!	TGAACAAAGAAGTGTTTTGA+AGG	+	chr1_4:59081126-59081145	Msa0173710:three_prime_UTR	30.0%
!!!	GAACAAAGAAGTGTTTTGAA+GGG	+	chr1_4:59081127-59081146	Msa0173710:three_prime_UTR	30.0%
!	AGCAAGAAAAAAGAGTATGA+TGG	+	chr1_4:59079503-59079522	Msa0173710:five_prime_UTR	30.0%
!	GCAAGAAAAAAGAGTATGAT+GGG	+	chr1_4:59079504-59079523	Msa0173710:five_prime_UTR	30.0%
	TTATTTAAACCTTAAGGTGG+CGG	+	chr1_4:59079584-59079603	Msa0173710:five_prime_UTR	30.0%
	CATTGTGGAATTGTAGAATT+TGG	-	chr1_4:59079645-59079664	None:intergenic	30.0%
	CAAATTCTACAATTCCACAA+TGG	+	chr1_4:59079643-59079662	Msa0173710:exon	30.0%
	GACACAAACATAGTAGTTTA+AGG	-	chr1_4:59079869-59079888	None:intergenic	30.0%
	TTAACTTATGAAGATGCAGA+AGG	+	chr1_4:59080255-59080274	Msa0173710:CDS	30.0%
	TTAAGTAAACTTACTCCCAA+GGG	-	chr1_4:59080305-59080324	None:intergenic	30.0%
!!	TGGCATAATTTTGGTATGTT+AGG	+	chr1_4:59080370-59080389	Msa0173710:intron	30.0%
!!	GGCATAATTTTGGTATGTTA+GGG	+	chr1_4:59080371-59080390	Msa0173710:intron	30.0%
	TTGTGTCAAAATCACACTAA+GGG	-	chr1_4:59080636-59080655	None:intergenic	30.0%
	CGATGAGTTTGGTAAATTTA+TGG	-	chr1_4:59080714-59080733	None:intergenic	30.0%
!!!	TACAATTTTTTTGGCCATGT+AGG	+	chr1_4:59080799-59080818	Msa0173710:intron	30.0%
!!	TTGCAAAGTCCTTTAAGATT+AGG	+	chr1_4:59081083-59081102	Msa0173710:three_prime_UTR	30.0%
!!!	TGAACAAAGAAGTGTTTTGA+AGG	+	chr1_4:59081126-59081145	Msa0173710:three_prime_UTR	30.0%
!!!	GAACAAAGAAGTGTTTTGAA+GGG	+	chr1_4:59081127-59081146	Msa0173710:three_prime_UTR	30.0%
!	AGAAAAAAGAGTATGATGGG+TGG	+	chr1_4:59079507-59079526	Msa0173710:five_prime_UTR	35.0%
	TACAATTCCACAATGGGAAA+AGG	+	chr1_4:59079650-59079669	Msa0173710:exon	35.0%
	ATGTTTCCTTCTTCTACTGT+TGG	-	chr1_4:59079699-59079718	None:intergenic	35.0%
	GATAGAGGATGAAACATTAG+AGG	-	chr1_4:59079726-59079745	None:intergenic	35.0%
!!	AGGATTTTGATGTGTGATAG+AGG	-	chr1_4:59079741-59079760	None:intergenic	35.0%
	GGAAAAAGATGTTGTTGATC+AGG	-	chr1_4:59079761-59079780	None:intergenic	35.0%
!	CTTTTTCCTGATCTTAACCT+TGG	+	chr1_4:59079773-59079792	Msa0173710:CDS	35.0%
	ATCAACATATTGTTGAGTGG+TGG	-	chr1_4:59079810-59079829	None:intergenic	35.0%
!	ATGTTGATTATTCCACCTCA+AGG	+	chr1_4:59079822-59079841	Msa0173710:CDS	35.0%
	TTCTTTAACATACCTTGAGG+TGG	-	chr1_4:59079837-59079856	None:intergenic	35.0%
	TTTGTCATATTAGGGGACAT+TGG	+	chr1_4:59079913-59079932	Msa0173710:intron	35.0%
	CATGTAAACCTTCACAAAGA+AGG	-	chr1_4:59079994-59080013	None:intergenic	35.0%
	CTTCTTTGTGAAGGTTTACA+TGG	+	chr1_4:59079992-59080011	Msa0173710:CDS	35.0%
	TTTGTGAAGGTTTACATGGA+AGG	+	chr1_4:59079996-59080015	Msa0173710:CDS	35.0%
	AAATTGAGCTTTCTCCCAAT+TGG	-	chr1_4:59080026-59080045	None:intergenic	35.0%
!!	CTCAATTTGCTAGCTCATAA+TGG	+	chr1_4:59080038-59080057	Msa0173710:CDS	35.0%
	TCATAATGGCTATCATGAGT+TGG	+	chr1_4:59080052-59080071	Msa0173710:CDS	35.0%
	TGACACTACCATTCTATGTA+AGG	+	chr1_4:59080097-59080116	Msa0173710:intron	35.0%
	GACACTACCATTCTATGTAA+GGG	+	chr1_4:59080098-59080117	Msa0173710:intron	35.0%
	AATGCATATATGAGGGGTAA+TGG	-	chr1_4:59080124-59080143	None:intergenic	35.0%
!!!	TGTGACTTTGTTATTTTGCC+AGG	+	chr1_4:59080189-59080208	Msa0173710:intron	35.0%
!!!	GTGACTTTGTTATTTTGCCA+GGG	+	chr1_4:59080190-59080209	Msa0173710:intron	35.0%
!!!	TGACTTTGTTATTTTGCCAG+GGG	+	chr1_4:59080191-59080210	Msa0173710:intron	35.0%
	AAGGAGACTTGATTATGGTT+GGG	+	chr1_4:59080274-59080293	Msa0173710:CDS	35.0%
	GTTAAGTAAACTTACTCCCA+AGG	-	chr1_4:59080306-59080325	None:intergenic	35.0%
	CTTGTGTCAAAATCACACTA+AGG	-	chr1_4:59080637-59080656	None:intergenic	35.0%
	GTTTGAATTGACGATGAGTT+TGG	-	chr1_4:59080725-59080744	None:intergenic	35.0%
	GATGATAAGAACATCCTACA+TGG	-	chr1_4:59080816-59080835	None:intergenic	35.0%
	TGTTCTTATCATCTGTGAAG+AGG	+	chr1_4:59080823-59080842	Msa0173710:CDS	35.0%
!	TTATGTTTGAGGACTAGCAA+AGG	+	chr1_4:59080981-59081000	Msa0173710:three_prime_UTR	35.0%
!	TATGTTTGAGGACTAGCAAA+GGG	+	chr1_4:59080982-59081001	Msa0173710:three_prime_UTR	35.0%
!	AGAAAAAAGAGTATGATGGG+TGG	+	chr1_4:59079507-59079526	Msa0173710:five_prime_UTR	35.0%
	TACAATTCCACAATGGGAAA+AGG	+	chr1_4:59079650-59079669	Msa0173710:exon	35.0%
	ATGTTTCCTTCTTCTACTGT+TGG	-	chr1_4:59079699-59079718	None:intergenic	35.0%
	GATAGAGGATGAAACATTAG+AGG	-	chr1_4:59079726-59079745	None:intergenic	35.0%
!!	AGGATTTTGATGTGTGATAG+AGG	-	chr1_4:59079741-59079760	None:intergenic	35.0%
	GGAAAAAGATGTTGTTGATC+AGG	-	chr1_4:59079761-59079780	None:intergenic	35.0%
!	CTTTTTCCTGATCTTAACCT+TGG	+	chr1_4:59079773-59079792	Msa0173710:CDS	35.0%
	ATCAACATATTGTTGAGTGG+TGG	-	chr1_4:59079810-59079829	None:intergenic	35.0%
!	ATGTTGATTATTCCACCTCA+AGG	+	chr1_4:59079822-59079841	Msa0173710:CDS	35.0%
	TTCTTTAACATACCTTGAGG+TGG	-	chr1_4:59079837-59079856	None:intergenic	35.0%
	TTTGTCATATTAGGGGACAT+TGG	+	chr1_4:59079913-59079932	Msa0173710:intron	35.0%
	CATGTAAACCTTCACAAAGA+AGG	-	chr1_4:59079994-59080013	None:intergenic	35.0%
	CTTCTTTGTGAAGGTTTACA+TGG	+	chr1_4:59079992-59080011	Msa0173710:CDS	35.0%
	TTTGTGAAGGTTTACATGGA+AGG	+	chr1_4:59079996-59080015	Msa0173710:CDS	35.0%
	AAATTGAGCTTTCTCCCAAT+TGG	-	chr1_4:59080026-59080045	None:intergenic	35.0%
!!	CTCAATTTGCTAGCTCATAA+TGG	+	chr1_4:59080038-59080057	Msa0173710:CDS	35.0%
	TCATAATGGCTATCATGAGT+TGG	+	chr1_4:59080052-59080071	Msa0173710:CDS	35.0%
	TGACACTACCATTCTATGTA+AGG	+	chr1_4:59080097-59080116	Msa0173710:intron	35.0%
	GACACTACCATTCTATGTAA+GGG	+	chr1_4:59080098-59080117	Msa0173710:intron	35.0%
	AATGCATATATGAGGGGTAA+TGG	-	chr1_4:59080124-59080143	None:intergenic	35.0%
!!!	TGTGACTTTGTTATTTTGCC+AGG	+	chr1_4:59080189-59080208	Msa0173710:intron	35.0%
!!!	GTGACTTTGTTATTTTGCCA+GGG	+	chr1_4:59080190-59080209	Msa0173710:intron	35.0%
!!!	TGACTTTGTTATTTTGCCAG+GGG	+	chr1_4:59080191-59080210	Msa0173710:intron	35.0%
	AAGGAGACTTGATTATGGTT+GGG	+	chr1_4:59080274-59080293	Msa0173710:CDS	35.0%
	GTTAAGTAAACTTACTCCCA+AGG	-	chr1_4:59080306-59080325	None:intergenic	35.0%
	CTTGTGTCAAAATCACACTA+AGG	-	chr1_4:59080637-59080656	None:intergenic	35.0%
	GTTTGAATTGACGATGAGTT+TGG	-	chr1_4:59080725-59080744	None:intergenic	35.0%
	GATGATAAGAACATCCTACA+TGG	-	chr1_4:59080816-59080835	None:intergenic	35.0%
	TGTTCTTATCATCTGTGAAG+AGG	+	chr1_4:59080823-59080842	Msa0173710:CDS	35.0%
!	TTATGTTTGAGGACTAGCAA+AGG	+	chr1_4:59080981-59081000	Msa0173710:three_prime_UTR	35.0%
!	TATGTTTGAGGACTAGCAAA+GGG	+	chr1_4:59080982-59081001	Msa0173710:three_prime_UTR	35.0%
	CTCAATCCAAGGTTAAGATC+AGG	-	chr1_4:59079782-59079801	None:intergenic	40.0%
!!	TACATGGAAGGCATTCCAAT+TGG	+	chr1_4:59080008-59080027	Msa0173710:CDS	40.0%
!!	ACATGGAAGGCATTCCAATT+GGG	+	chr1_4:59080009-59080028	Msa0173710:CDS	40.0%
	GTAATGGCCCTTACATAGAA+TGG	-	chr1_4:59080108-59080127	None:intergenic	40.0%
!!!	GACTTTGTTATTTTGCCAGG+GGG	+	chr1_4:59080192-59080211	Msa0173710:intron	40.0%
!!!	ACTTTGTTATTTTGCCAGGG+GGG	+	chr1_4:59080193-59080212	Msa0173710:intron	40.0%
	GTTAACACATGACATCTCTC+TGG	-	chr1_4:59080240-59080259	None:intergenic	40.0%
	TGCAGAAGGAGACTTGATTA+TGG	+	chr1_4:59080269-59080288	Msa0173710:CDS	40.0%
	GAAGGAGACTTGATTATGGT+TGG	+	chr1_4:59080273-59080292	Msa0173710:CDS	40.0%
	AGGAGACTTGATTATGGTTG+GGG	+	chr1_4:59080275-59080294	Msa0173710:CDS	40.0%
	TTGGTATGTTAGGGTGTGTT+TGG	+	chr1_4:59080380-59080399	Msa0173710:intron	40.0%
	TGGTATGTTAGGGTGTGTTT+GGG	+	chr1_4:59080381-59080400	Msa0173710:intron	40.0%
!	ATCACACTAAGGGTGTGTTT+GGG	-	chr1_4:59080626-59080645	None:intergenic	40.0%
!	AATCACACTAAGGGTGTGTT+TGG	-	chr1_4:59080627-59080646	None:intergenic	40.0%
!	GGTAACTGTGATTTTCGGTT+TGG	-	chr1_4:59080693-59080712	None:intergenic	40.0%
	TGAAGAGGTTGAAGATCACA+AGG	+	chr1_4:59080838-59080857	Msa0173710:CDS	40.0%
	GAAGAGGTTGAAGATCACAA+GGG	+	chr1_4:59080839-59080858	Msa0173710:CDS	40.0%
!!	ATCACAAGGGTTGATGCATT+CGG	+	chr1_4:59080852-59080871	Msa0173710:CDS	40.0%
	CTCAATCCAAGGTTAAGATC+AGG	-	chr1_4:59079782-59079801	None:intergenic	40.0%
!!	TACATGGAAGGCATTCCAAT+TGG	+	chr1_4:59080008-59080027	Msa0173710:CDS	40.0%
!!	ACATGGAAGGCATTCCAATT+GGG	+	chr1_4:59080009-59080028	Msa0173710:CDS	40.0%
	GTAATGGCCCTTACATAGAA+TGG	-	chr1_4:59080108-59080127	None:intergenic	40.0%
!!!	GACTTTGTTATTTTGCCAGG+GGG	+	chr1_4:59080192-59080211	Msa0173710:intron	40.0%
!!!	ACTTTGTTATTTTGCCAGGG+GGG	+	chr1_4:59080193-59080212	Msa0173710:intron	40.0%
	GTTAACACATGACATCTCTC+TGG	-	chr1_4:59080240-59080259	None:intergenic	40.0%
	TGCAGAAGGAGACTTGATTA+TGG	+	chr1_4:59080269-59080288	Msa0173710:CDS	40.0%
	GAAGGAGACTTGATTATGGT+TGG	+	chr1_4:59080273-59080292	Msa0173710:CDS	40.0%
	AGGAGACTTGATTATGGTTG+GGG	+	chr1_4:59080275-59080294	Msa0173710:CDS	40.0%
	TTGGTATGTTAGGGTGTGTT+TGG	+	chr1_4:59080380-59080399	Msa0173710:intron	40.0%
	TGGTATGTTAGGGTGTGTTT+GGG	+	chr1_4:59080381-59080400	Msa0173710:intron	40.0%
!	ATCACACTAAGGGTGTGTTT+GGG	-	chr1_4:59080626-59080645	None:intergenic	40.0%
!	AATCACACTAAGGGTGTGTT+TGG	-	chr1_4:59080627-59080646	None:intergenic	40.0%
!	GGTAACTGTGATTTTCGGTT+TGG	-	chr1_4:59080693-59080712	None:intergenic	40.0%
	TGAAGAGGTTGAAGATCACA+AGG	+	chr1_4:59080838-59080857	Msa0173710:CDS	40.0%
	GAAGAGGTTGAAGATCACAA+GGG	+	chr1_4:59080839-59080858	Msa0173710:CDS	40.0%
!!	ATCACAAGGGTTGATGCATT+CGG	+	chr1_4:59080852-59080871	Msa0173710:CDS	40.0%
	AAGAATAAGCCGCCACCTTA+AGG	-	chr1_4:59079596-59079615	None:intergenic	45.0%
!	AGTGGAACCTTTTCCCATTG+TGG	-	chr1_4:59079660-59079679	None:intergenic	45.0%
	TCTTCTACTGTTGGAAGAGG+AGG	-	chr1_4:59079690-59079709	None:intergenic	45.0%
	CCTTCTTCTACTGTTGGAAG+AGG	-	chr1_4:59079693-59079712	None:intergenic	45.0%
	CCTCTTCCAACAGTAGAAGA+AGG	+	chr1_4:59079690-59079709	Msa0173710:CDS	45.0%
	TGGTGGAAATGCTCAATCCA+AGG	-	chr1_4:59079793-59079812	None:intergenic	45.0%
	TGGCAACCAATTCAGCAACA+AGG	+	chr1_4:59079933-59079952	Msa0173710:CDS	45.0%
	CAACCAATTCAGCAACAAGG+CGG	+	chr1_4:59079936-59079955	Msa0173710:CDS	45.0%
	CAACAGTGCCTTCTTTGTGA+AGG	+	chr1_4:59079983-59080002	Msa0173710:CDS	45.0%
	TTAGGGTGTGTTTGGGAAGA+GGG	+	chr1_4:59080388-59080407	Msa0173710:intron	45.0%
	TGTGTTTGGGAAGAGGGTTT+AGG	+	chr1_4:59080394-59080413	Msa0173710:intron	45.0%
	TTTGGGAAGAGGGTTTAGGA+GGG	+	chr1_4:59080398-59080417	Msa0173710:intron	45.0%
	TTTGGGAAGAGGGTTTAGGA+GGG	-	chr1_4:59080398-59080417	None:intergenic	45.0%
	TGTGTTTGGGAAGAGGGTTT+AGG	-	chr1_4:59080394-59080413	None:intergenic	45.0%
!	TAAGGGTGTGTTTGGGAAGA+GGG	-	chr1_4:59080619-59080638	None:intergenic	45.0%
!!	TCACAAGGGTTGATGCATTC+GGG	+	chr1_4:59080853-59080872	Msa0173710:CDS	45.0%
	AAGAATAAGCCGCCACCTTA+AGG	-	chr1_4:59079596-59079615	None:intergenic	45.0%
!	AGTGGAACCTTTTCCCATTG+TGG	-	chr1_4:59079660-59079679	None:intergenic	45.0%
	TCTTCTACTGTTGGAAGAGG+AGG	-	chr1_4:59079690-59079709	None:intergenic	45.0%
	CCTTCTTCTACTGTTGGAAG+AGG	-	chr1_4:59079693-59079712	None:intergenic	45.0%
	CCTCTTCCAACAGTAGAAGA+AGG	+	chr1_4:59079690-59079709	Msa0173710:CDS	45.0%
	TGGTGGAAATGCTCAATCCA+AGG	-	chr1_4:59079793-59079812	None:intergenic	45.0%
	TGGCAACCAATTCAGCAACA+AGG	+	chr1_4:59079933-59079952	Msa0173710:CDS	45.0%
	CAACCAATTCAGCAACAAGG+CGG	+	chr1_4:59079936-59079955	Msa0173710:CDS	45.0%
	CAACAGTGCCTTCTTTGTGA+AGG	+	chr1_4:59079983-59080002	Msa0173710:CDS	45.0%
	TTAGGGTGTGTTTGGGAAGA+GGG	+	chr1_4:59080388-59080407	Msa0173710:intron	45.0%
	TGTGTTTGGGAAGAGGGTTT+AGG	+	chr1_4:59080394-59080413	Msa0173710:intron	45.0%
	TTTGGGAAGAGGGTTTAGGA+GGG	+	chr1_4:59080398-59080417	Msa0173710:intron	45.0%
	TTTGGGAAGAGGGTTTAGGA+GGG	-	chr1_4:59080398-59080417	None:intergenic	45.0%
	TGTGTTTGGGAAGAGGGTTT+AGG	-	chr1_4:59080394-59080413	None:intergenic	45.0%
!	TAAGGGTGTGTTTGGGAAGA+GGG	-	chr1_4:59080619-59080638	None:intergenic	45.0%
!!	TCACAAGGGTTGATGCATTC+GGG	+	chr1_4:59080853-59080872	Msa0173710:CDS	45.0%
	GGAAGAGGAGGAAGAAGAAG+TGG	-	chr1_4:59079678-59079697	None:intergenic	50.0%
!	TCACCGCCTTGTTGCTGAAT+TGG	-	chr1_4:59079942-59079961	None:intergenic	50.0%
	TTATGGTTGGGGATGTCCCT+TGG	+	chr1_4:59080286-59080305	Msa0173710:CDS	50.0%
	TATGGTTGGGGATGTCCCTT+GGG	+	chr1_4:59080287-59080306	Msa0173710:CDS	50.0%
	GTTAGGGTGTGTTTGGGAAG+AGG	+	chr1_4:59080387-59080406	Msa0173710:intron	50.0%
	GTTTGGGAAGAGGGTTTAGG+AGG	+	chr1_4:59080397-59080416	Msa0173710:intron	50.0%
	TTGGGAAGAGGGTTTAGGAG+GGG	+	chr1_4:59080399-59080418	Msa0173710:intron	50.0%
	AAGAGGGTTTAGGAGGGGAA+GGG	+	chr1_4:59080404-59080423	Msa0173710:intron	50.0%
	AAGAGGGTTTAGGAGGGGAA+GGG	-	chr1_4:59080404-59080423	None:intergenic	50.0%
	TTGGGAAGAGGGTTTAGGAG+GGG	-	chr1_4:59080399-59080418	None:intergenic	50.0%
	GTTTGGGAAGAGGGTTTAGG+AGG	-	chr1_4:59080397-59080416	None:intergenic	50.0%
!	CTAAGGGTGTGTTTGGGAAG+AGG	-	chr1_4:59080620-59080639	None:intergenic	50.0%
	GGAAGAGGAGGAAGAAGAAG+TGG	-	chr1_4:59079678-59079697	None:intergenic	50.0%
!	TCACCGCCTTGTTGCTGAAT+TGG	-	chr1_4:59079942-59079961	None:intergenic	50.0%
	TTATGGTTGGGGATGTCCCT+TGG	+	chr1_4:59080286-59080305	Msa0173710:CDS	50.0%
	TATGGTTGGGGATGTCCCTT+GGG	+	chr1_4:59080287-59080306	Msa0173710:CDS	50.0%
	GTTAGGGTGTGTTTGGGAAG+AGG	+	chr1_4:59080387-59080406	Msa0173710:intron	50.0%
	GTTTGGGAAGAGGGTTTAGG+AGG	+	chr1_4:59080397-59080416	Msa0173710:intron	50.0%
	TTGGGAAGAGGGTTTAGGAG+GGG	+	chr1_4:59080399-59080418	Msa0173710:intron	50.0%
	AAGAGGGTTTAGGAGGGGAA+GGG	+	chr1_4:59080404-59080423	Msa0173710:intron	50.0%
	AAGAGGGTTTAGGAGGGGAA+GGG	-	chr1_4:59080404-59080423	None:intergenic	50.0%
	TTGGGAAGAGGGTTTAGGAG+GGG	-	chr1_4:59080399-59080418	None:intergenic	50.0%
	GTTTGGGAAGAGGGTTTAGG+AGG	-	chr1_4:59080397-59080416	None:intergenic	50.0%
!	CTAAGGGTGTGTTTGGGAAG+AGG	-	chr1_4:59080620-59080639	None:intergenic	50.0%
	TTTGCCAGGGGGGACTGAAA+TGG	+	chr1_4:59080203-59080222	Msa0173710:intron	55.0%
	GAAGAGGGTTTAGGAGGGGA+AGG	+	chr1_4:59080403-59080422	Msa0173710:intron	55.0%
	GAAGAGGGTTTAGGAGGGGA+AGG	-	chr1_4:59080403-59080422	None:intergenic	55.0%
	TTTGCCAGGGGGGACTGAAA+TGG	+	chr1_4:59080203-59080222	Msa0173710:intron	55.0%
	GAAGAGGGTTTAGGAGGGGA+AGG	+	chr1_4:59080403-59080422	Msa0173710:intron	55.0%
	GAAGAGGGTTTAGGAGGGGA+AGG	-	chr1_4:59080403-59080422	None:intergenic	55.0%
	CCATCCATTTCAGTCCCCCC+TGG	-	chr1_4:59080210-59080229	None:intergenic	60.0%
	CCAGGGGGGACTGAAATGGA+TGG	+	chr1_4:59080207-59080226	Msa0173710:intron	60.0%
	AGGGTTTAGGAGGGGAAGGG+AGG	+	chr1_4:59080407-59080426	Msa0173710:intron	60.0%
	GGGTTTAGGAGGGGAAGGGA+GGG	+	chr1_4:59080408-59080427	Msa0173710:intron	60.0%
	GGTTTAGGAGGGGAAGGGAG+GGG	+	chr1_4:59080409-59080428	Msa0173710:intron	60.0%
	TTAGGAGGGGAAGGGAGTGG+AGG	-	chr1_4:59080595-59080614	None:intergenic	60.0%
	GGTTTAGGAGGGGAAGGGAG+TGG	-	chr1_4:59080409-59080428	None:intergenic	60.0%
	CCATCCATTTCAGTCCCCCC+TGG	-	chr1_4:59080210-59080229	None:intergenic	60.0%
	CCAGGGGGGACTGAAATGGA+TGG	+	chr1_4:59080207-59080226	Msa0173710:intron	60.0%
	AGGGTTTAGGAGGGGAAGGG+AGG	+	chr1_4:59080407-59080426	Msa0173710:intron	60.0%
	GGGTTTAGGAGGGGAAGGGA+GGG	+	chr1_4:59080408-59080427	Msa0173710:intron	60.0%
	GGTTTAGGAGGGGAAGGGAG+GGG	+	chr1_4:59080409-59080428	Msa0173710:intron	60.0%
	TTAGGAGGGGAAGGGAGTGG+AGG	-	chr1_4:59080595-59080614	None:intergenic	60.0%
	GGTTTAGGAGGGGAAGGGAG+TGG	-	chr1_4:59080409-59080428	None:intergenic	60.0%
	TTAGGAGGGGAAGGGAGGGG+AGG	+	chr1_4:59080412-59080431	Msa0173710:intron	65.0%
	TAGGAGGGGAAGGGAGGGGA+GGG	+	chr1_4:59080413-59080432	Msa0173710:intron	65.0%
	TTAGGAGGGGAAGGGAGGGG+AGG	+	chr1_4:59080412-59080431	Msa0173710:intron	65.0%
	TAGGAGGGGAAGGGAGGGGA+GGG	+	chr1_4:59080413-59080432	Msa0173710:intron	65.0%
	AGGAGGGGAAGGGAGGGGAG+GGG	+	chr1_4:59080414-59080433	Msa0173710:intron	70.0%
	AGGAGGGGAAGGGAGGGGAG+GGG	+	chr1_4:59080414-59080433	Msa0173710:intron	70.0%
	AGGGGAAGGGAGGGGAGGGG+AGG	+	chr1_4:59080417-59080436	Msa0173710:intron	75.0%
	GGGGAAGGGAGGGGAGGGGA+GGG	+	chr1_4:59080418-59080437	Msa0173710:intron	75.0%
	AGGGGAAGGGAGGGGAGGGG+AGG	+	chr1_4:59080417-59080436	Msa0173710:intron	75.0%
	GGGGAAGGGAGGGGAGGGGA+GGG	+	chr1_4:59080418-59080437	Msa0173710:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	59079490	59081177	59079490	ID=Msa0173710;Name=Msa0173710
chr1_4	mRNA	59079490	59081177	59079490	ID=Msa0173710-mRNA-1;Parent=Msa0173710;Name=Msa0173710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=172\|1\|1\|1\|1\|1\|4\|296\|176
chr1_4	exon	59079490	59079843	59079490	ID=Msa0173710-mRNA-1:exon:18436;Parent=Msa0173710-mRNA-1
chr1_4	exon	59079926	59080113	59079926	ID=Msa0173710-mRNA-1:exon:18437;Parent=Msa0173710-mRNA-1
chr1_4	exon	59080211	59080310	59080211	ID=Msa0173710-mRNA-1:exon:18438;Parent=Msa0173710-mRNA-1
chr1_4	exon	59080821	59081177	59080821	ID=Msa0173710-mRNA-1:exon:18439;Parent=Msa0173710-mRNA-1
chr1_4	five_prime_UTR	59079490	59079661	59079490	ID=Msa0173710-mRNA-1:five_prime_utr;Parent=Msa0173710-mRNA-1
chr1_4	CDS	59079662	59079843	59079662	ID=Msa0173710-mRNA-1:cds;Parent=Msa0173710-mRNA-1
chr1_4	CDS	59079926	59080113	59079926	ID=Msa0173710-mRNA-1:cds;Parent=Msa0173710-mRNA-1
chr1_4	CDS	59080211	59080310	59080211	ID=Msa0173710-mRNA-1:cds;Parent=Msa0173710-mRNA-1
chr1_4	CDS	59080821	59080881	59080821	ID=Msa0173710-mRNA-1:cds;Parent=Msa0173710-mRNA-1
chr1_4	three_prime_UTR	59080882	59081177	59080882	ID=Msa0173710-mRNA-1:three_prime_utr;Parent=Msa0173710-mRNA-1

Gene Sequence

>Msa0173710

ATGGGAAAAGGTTCCACTTCTTCTTCCTCCTCTTCCAACAGTAGAAGAAGGAAACATAATTCCTCTAATGTTTCATCCTCTATCACACATCAAAATCCTGATCAACAACATCTTTTTCCTGATCTTAACCTTGGATTGAGCATTTCCACCACTCAACAATATGTTGATTATTCCACCTCAAGGGGACATTGGCAACCAATTCAGCAACAAGGCGGTGAAGTAAATGATTGCAGTGATTACAACAGTGCCTTCTTTGTGAAGGTTTACATGGAAGGCATTCCAATTGGGAGAAAGCTCAATTTGCTAGCTCATAATGGCTATCATGAGTTGGTTAATACACTTGAACAAATGTTTGACACTACCATTCTATGGGGGACTGAAATGGATGGAGTGCAACCAGAGAGATGTCATGTGTTAACTTATGAAGATGCAGAAGGAGACTTGATTATGGTTGGGGATGTCCCTTGGGAGATGTTCTTATCATCTGTGAAGAGGTTGAAGATCACAAGGGTTGATGCATTCGGGCTTTAA

Protein sequence

>Msa0173710

MGKGSTSSSSSSNSRRRKHNSSNVSSSITHQNPDQQHLFPDLNLGLSISTTQQYVDYSTSRGHWQPIQQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQPERCHVLTYEDAEGDLIMVGDVPWEMFLSSVKRLKITRVDAFGL*