Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718040 | XP_003612362.1 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 1.43e-91 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718040 | sp|P40619|HMGL_IPONI | 62.602 | 123 | 44 | 2 | 11 | 132 | 10 | 131 | 6.36e-41 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718040 | G7K181 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 6.83e-92 | 271 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0718040 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0718040 | 0.842077 | 3.222300e-58 | -8.615850e-47 |
| Msa0016530 | Msa0718040 | 0.813355 | 2.668850e-51 | -8.615850e-47 |
| Msa0018920 | Msa0718040 | 0.820012 | 8.587347e-53 | -8.615850e-47 |
| Msa0020540 | Msa0718040 | 0.807457 | 5.007367e-50 | -8.615850e-47 |
| Msa0030070 | Msa0718040 | 0.853396 | 2.457320e-61 | -8.615850e-47 |
| Msa0030690 | Msa0718040 | 0.830971 | 2.174768e-55 | -8.615850e-47 |
| Msa0032970 | Msa0718040 | 0.800846 | 1.190163e-48 | -8.615850e-47 |
| Msa0032980 | Msa0718040 | 0.849234 | 3.685459e-60 | -8.615850e-47 |
| Msa0035140 | Msa0718040 | 0.816242 | 6.115958e-52 | -8.615850e-47 |
| Msa0040640 | Msa0718040 | 0.810489 | 1.123801e-50 | -8.615850e-47 |
| Msa0044520 | Msa0718040 | 0.801597 | 8.353340e-49 | -8.615850e-47 |
| Msa0056180 | Msa0718040 | 0.806312 | 8.742888e-50 | -8.615850e-47 |
| Msa0067060 | Msa0718040 | 0.856553 | 2.977065e-62 | -8.615850e-47 |
| Msa0067380 | Msa0718040 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0068150 | Msa0718040 | 0.820039 | 8.468163e-53 | -8.615850e-47 |
| Msa0091350 | Msa0718040 | 0.855628 | 5.551963e-62 | -8.615850e-47 |
| Msa0091360 | Msa0718040 | 0.807971 | 3.894036e-50 | -8.615850e-47 |
| Msa0093860 | Msa0718040 | 0.838553 | 2.685257e-57 | -8.615850e-47 |
| Msa0100600 | Msa0718040 | 0.804470 | 2.127624e-49 | -8.615850e-47 |
| Msa0106630 | Msa0718040 | 0.833859 | 4.186463e-56 | -8.615850e-47 |
| Msa0112670 | Msa0718040 | 0.835527 | 1.593137e-56 | -8.615850e-47 |
| Msa0113410 | Msa0718040 | 0.812101 | 5.022404e-51 | -8.615850e-47 |
| Msa0115550 | Msa0718040 | 0.823792 | 1.144585e-53 | -8.615850e-47 |
| Msa0603410 | Msa0718040 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
| Msa0603980 | Msa0718040 | 0.808522 | 2.972455e-50 | -8.615850e-47 |
| Msa0606100 | Msa0718040 | 0.835868 | 1.306292e-56 | -8.615850e-47 |
| Msa0607330 | Msa0718040 | 0.833387 | 5.490524e-56 | -8.615850e-47 |
| Msa0608350 | Msa0718040 | 0.853557 | 2.208147e-61 | -8.615850e-47 |
| Msa0612520 | Msa0718040 | 0.825252 | 5.188540e-54 | -8.615850e-47 |
| Msa0613630 | Msa0718040 | 0.824290 | 8.745220e-54 | -8.615850e-47 |
| Msa0615630 | Msa0718040 | 0.827556 | 1.465890e-54 | -8.615850e-47 |
| Msa0620500 | Msa0718040 | 0.857584 | 1.477481e-62 | -8.615850e-47 |
| Msa0621710 | Msa0718040 | 0.807110 | 5.931356e-50 | -8.615850e-47 |
| Msa0625340 | Msa0718040 | 0.837604 | 4.712861e-57 | -8.615850e-47 |
| Msa0625620 | Msa0718040 | 0.832581 | 8.711196e-56 | -8.615850e-47 |
| Msa0640800 | Msa0718040 | 0.826509 | 2.608780e-54 | -8.615850e-47 |
| Msa0645340 | Msa0718040 | 0.836543 | 8.799858e-57 | -8.615850e-47 |
| Msa0647050 | Msa0718040 | 0.848643 | 5.377227e-60 | -8.615850e-47 |
| Msa0647440 | Msa0718040 | 0.842494 | 2.498340e-58 | -8.615850e-47 |
| Msa0648040 | Msa0718040 | 0.800570 | 1.354927e-48 | -8.615850e-47 |
| Msa0648760 | Msa0718040 | 0.865752 | 4.700034e-65 | -8.615850e-47 |
| Msa0653160 | Msa0718040 | 0.824679 | 7.084648e-54 | -8.615850e-47 |
| Msa0654740 | Msa0718040 | 0.854148 | 1.492885e-61 | -8.615850e-47 |
| Msa0657210 | Msa0718040 | 0.804024 | 2.633999e-49 | -8.615850e-47 |
| Msa0659150 | Msa0718040 | 0.838565 | 2.666178e-57 | -8.615850e-47 |
| Msa0659200 | Msa0718040 | 0.821748 | 3.422909e-53 | -8.615850e-47 |
| Msa0660260 | Msa0718040 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
| Msa0668900 | Msa0718040 | 0.819270 | 1.268376e-52 | -8.615850e-47 |
| Msa0687090 | Msa0718040 | 0.828424 | 9.060027e-55 | -8.615850e-47 |
| Msa0688620 | Msa0718040 | 0.880246 | 6.429978e-70 | -8.615850e-47 |
| Msa0690320 | Msa0718040 | 0.863191 | 2.967942e-64 | -8.615850e-47 |
| Msa0690740 | Msa0718040 | 0.807630 | 4.602401e-50 | -8.615850e-47 |
| Msa0691270 | Msa0718040 | 0.873009 | 2.048440e-67 | -8.615850e-47 |
| Msa0695560 | Msa0718040 | 0.809366 | 1.960614e-50 | -8.615850e-47 |
| Msa0698730 | Msa0718040 | 0.847680 | 9.920727e-60 | -8.615850e-47 |
| Msa0700500 | Msa0718040 | 0.812292 | 4.561488e-51 | -8.615850e-47 |
| Msa0701250 | Msa0718040 | 0.822972 | 1.779547e-53 | -8.615850e-47 |
| Msa0705180 | Msa0718040 | 0.802799 | 4.725588e-49 | -8.615850e-47 |
| Msa0707260 | Msa0718040 | 0.815168 | 1.061498e-51 | -8.615850e-47 |
| Msa0711010 | Msa0718040 | 0.835371 | 1.744359e-56 | -8.615850e-47 |
| Msa0714520 | Msa0718040 | 0.824292 | 8.737512e-54 | -8.615850e-47 |
| Msa0717900 | Msa0718040 | 0.865930 | 4.130586e-65 | -8.615850e-47 |
| Msa0718040 | Msa0720280 | 0.872777 | 2.449774e-67 | -8.615850e-47 |
| Msa0718040 | Msa0737130 | 0.804213 | 2.406309e-49 | -8.615850e-47 |
| Msa0718040 | Msa0740710 | 0.842733 | 2.159052e-58 | -8.615850e-47 |
| Msa0718040 | Msa0747740 | 0.809046 | 2.296136e-50 | -8.615850e-47 |
| Msa0718040 | Msa0749190 | 0.881065 | 3.271528e-70 | -8.615850e-47 |
| Msa0718040 | Msa0750520 | 0.878223 | 3.341645e-69 | -8.615850e-47 |
| Msa0718040 | Msa0778600 | 0.833451 | 5.294310e-56 | -8.615850e-47 |
| Msa0718040 | Msa0780910 | 0.829792 | 4.222090e-55 | -8.615850e-47 |
| Msa0718040 | Msa0800660 | 0.818250 | 2.161483e-52 | -8.615850e-47 |
| Msa0718040 | Msa0803140 | 0.870686 | 1.209897e-66 | -8.615850e-47 |
| Msa0718040 | Msa0816080 | 0.855982 | 4.375156e-62 | -8.615850e-47 |
| Msa0718040 | Msa0817360 | 0.800607 | 1.331624e-48 | -8.615850e-47 |
| Msa0718040 | Msa0821160 | 0.837547 | 4.873293e-57 | -8.615850e-47 |
| Msa0718040 | Msa0821350 | 0.817909 | 2.582209e-52 | -8.615850e-47 |
| Msa0718040 | Msa0835350 | 0.818271 | 2.138361e-52 | -8.615850e-47 |
| Msa0718040 | Msa0837680 | 0.809897 | 1.507932e-50 | -8.615850e-47 |
| Msa0718040 | Msa0841500 | 0.867480 | 1.326689e-65 | -8.615850e-47 |
| Msa0718040 | Msa0861440 | 0.815895 | 7.313770e-52 | -8.615850e-47 |
| Msa0718040 | Msa0866530 | 0.803212 | 3.882444e-49 | -8.615850e-47 |
| Msa0718040 | Msa0879920 | 0.800035 | 1.740397e-48 | -8.615850e-47 |
| Msa0718040 | Msa0900090 | 0.824090 | 9.744265e-54 | -8.615850e-47 |
| Msa0718040 | Msa0900760 | 0.803712 | 3.058228e-49 | -8.615850e-47 |
| Msa0718040 | Msa0901150 | 0.859998 | 2.804691e-63 | -8.615850e-47 |
| Msa0718040 | Msa0909760 | 0.880958 | 3.573989e-70 | -8.615850e-47 |
| Msa0718040 | Msa0924430 | 0.814225 | 1.716689e-51 | -8.615850e-47 |
| Msa0718040 | Msa0926080 | 0.828542 | 8.486177e-55 | -8.615850e-47 |
| Msa0718040 | Msa0931590 | 0.802202 | 6.274897e-49 | -8.615850e-47 |
| Msa0718040 | Msa0960770 | 0.815286 | 9.991390e-52 | -8.615850e-47 |
| Msa0718040 | Msa0965470 | 0.809882 | 1.519101e-50 | -8.615850e-47 |
| Msa0718040 | Msa0966710 | 0.854649 | 1.069275e-61 | -8.615850e-47 |
| Msa0718040 | Msa0999950 | 0.824193 | 9.214156e-54 | -8.615850e-47 |
| Msa0718040 | Msa1000970 | 0.856229 | 3.705067e-62 | -8.615850e-47 |
| Msa0718040 | Msa1002640 | 0.801027 | 1.093042e-48 | -8.615850e-47 |
| Msa0718040 | Msa1008670 | 0.860931 | 1.463429e-63 | -8.615850e-47 |
| Msa0718040 | Msa1008680 | 0.842928 | 1.916434e-58 | -8.615850e-47 |
| Msa0718040 | Msa1033920 | 0.857520 | 1.543603e-62 | -8.615850e-47 |
| Msa0718040 | Msa1035570 | 0.809066 | 2.273248e-50 | -8.615850e-47 |
| Msa0718040 | Msa1035650 | 0.818592 | 1.808825e-52 | -8.615850e-47 |
| Msa0718040 | Msa1060900 | 0.848783 | 4.918198e-60 | -8.615850e-47 |
| Msa0718040 | Msa1071410 | 0.880535 | 5.065771e-70 | -8.615850e-47 |
| Msa0718040 | Msa1076020 | 0.826082 | 3.297877e-54 | -8.615850e-47 |
| Msa0718040 | Msa1078880 | 0.840474 | 8.508031e-58 | -8.615850e-47 |
| Msa0718040 | Msa1078970 | 0.853293 | 2.630217e-61 | -8.615850e-47 |
| Msa0718040 | Msa1079640 | 0.832193 | 1.087187e-55 | -8.615850e-47 |
| Msa0718040 | Msa1082380 | 0.888055 | 8.283776e-73 | -8.615850e-47 |
| Msa0718040 | Msa1087660 | 0.812874 | 3.404100e-51 | -8.615850e-47 |
| Msa0718040 | Msa1104220 | 0.801059 | 1.076556e-48 | -8.615850e-47 |
| Msa0718040 | Msa1106220 | 0.823805 | 1.136601e-53 | -8.615850e-47 |
| Msa0718040 | Msa1116190 | 0.832508 | 9.083713e-56 | -8.615850e-47 |
| Msa0718040 | Msa1116660 | 0.869140 | 3.871106e-66 | -8.615850e-47 |
| Msa0718040 | Msa1116740 | 0.871534 | 6.352530e-67 | -8.615850e-47 |
| Msa0718040 | Msa1124470 | 0.823103 | 1.658305e-53 | -8.615850e-47 |
| Msa0718040 | Msa1126620 | 0.803026 | 4.242710e-49 | -8.615850e-47 |
| Msa0718040 | Msa1127280 | 0.864048 | 1.609128e-64 | -8.615850e-47 |
| Msa0718040 | Msa1139050 | 0.825577 | 4.344664e-54 | -8.615850e-47 |
| Msa0718040 | Msa1148630 | 0.819990 | 8.685706e-53 | -8.615850e-47 |
| Msa0718040 | Msa1149450 | 0.817070 | 3.991050e-52 | -8.615850e-47 |
| Msa0718040 | Msa1162880 | 0.889121 | 3.216612e-73 | -8.615850e-47 |
| Msa0718040 | Msa1163180 | 0.823865 | 1.100496e-53 | -8.615850e-47 |
| Msa0718040 | Msa1165480 | 0.869670 | 2.601914e-66 | -8.615850e-47 |
| Msa0718040 | Msa1169190 | 0.841740 | 3.955052e-58 | -8.615850e-47 |
| Msa0718040 | Msa1190390 | 0.819396 | 1.186983e-52 | -8.615850e-47 |
| Msa0718040 | Msa1212700 | 0.840287 | 9.522423e-58 | -8.615850e-47 |
| Msa0718040 | Msa1212920 | 0.823564 | 1.294276e-53 | -8.615850e-47 |
| Msa0718040 | Msa1213830 | 0.809496 | 1.838449e-50 | -8.615850e-47 |
| Msa0718040 | Msa1214350 | 0.818123 | 2.309874e-52 | -8.615850e-47 |
| Msa0718040 | Msa1215980 | 0.858351 | 8.742951e-63 | -8.615850e-47 |
| Msa0718040 | Msa1219770 | 0.838777 | 2.350792e-57 | -8.615850e-47 |
| Msa0718040 | Msa1220170 | 0.803466 | 3.439497e-49 | -8.615850e-47 |
| Msa0718040 | Msa1223390 | 0.817848 | 2.664850e-52 | -8.615850e-47 |
| Msa0718040 | Msa1254420 | 0.847132 | 1.402971e-59 | -8.615850e-47 |
| Msa0718040 | Msa1254540 | 0.849297 | 3.539046e-60 | -8.615850e-47 |
| Msa0718040 | Msa1263740 | 0.842760 | 2.123331e-58 | -8.615850e-47 |
| Msa0718040 | Msa1263780 | 0.842681 | 2.229393e-58 | -8.615850e-47 |
| Msa0718040 | Msa1266690 | 0.842023 | 3.329665e-58 | -8.615850e-47 |
| Msa0718040 | Msa1267930 | 0.822124 | 2.801041e-53 | -8.615850e-47 |
| Msa0718040 | Msa1294460 | 0.851311 | 9.639356e-61 | -8.615850e-47 |
| Msa0718040 | Msa1294790 | 0.846985 | 1.539890e-59 | -8.615850e-47 |
| Msa0718040 | Msa1297070 | 0.801713 | 7.906354e-49 | -8.615850e-47 |
| Msa0718040 | Msa1299980 | 0.834186 | 3.466495e-56 | -8.615850e-47 |
| Msa0718040 | Msa1300460 | 0.820739 | 5.848343e-53 | -8.615850e-47 |
| Msa0718040 | Msa1301820 | 0.810829 | 9.487921e-51 | -8.615850e-47 |
| Msa0718040 | Msa1305780 | 0.835174 | 1.956861e-56 | -8.615850e-47 |
| Msa0718040 | Msa1308850 | 0.812807 | 3.521208e-51 | -8.615850e-47 |
| Msa0718040 | Msa1331650 | 0.830841 | 2.339724e-55 | -8.615850e-47 |
| Msa0718040 | Msa1332950 | 0.805630 | 1.216773e-49 | -8.615850e-47 |
| Msa0718040 | Msa1333360 | 0.839191 | 1.836733e-57 | -8.615850e-47 |
| Msa0718040 | Msa1339170 | 0.820207 | 7.750043e-53 | -8.615850e-47 |
| Msa0718040 | Msa1342810 | 0.845886 | 3.069528e-59 | -8.615850e-47 |
| Msa0718040 | Msa1361930 | 0.881218 | 2.881799e-70 | -8.615850e-47 |
| Msa0718040 | Msa1364410 | 0.833279 | 5.842129e-56 | -8.615850e-47 |
| Msa0718040 | Msa1374790 | 0.804704 | 1.901155e-49 | -8.615850e-47 |
| Msa0718040 | Msa1381470 | 0.808831 | 2.552187e-50 | -8.615850e-47 |
| Msa0718040 | Msa1381800 | 0.874336 | 7.314635e-68 | -8.615850e-47 |
| Msa0718040 | Msa1383310 | 0.813132 | 2.988650e-51 | -8.615850e-47 |
| Msa0718040 | Msa1387500 | 0.844237 | 8.562278e-59 | -8.615850e-47 |
| Msa0718040 | Msa1393560 | 0.827427 | 1.573565e-54 | -8.615850e-47 |
| Msa0718040 | Msa1400010 | 0.816047 | 6.763586e-52 | -8.615850e-47 |
| Msa0718040 | Msa1406720 | 0.835648 | 1.484475e-56 | -8.615850e-47 |
| Msa0718040 | Msa1410190 | 0.837386 | 5.358245e-57 | -8.615850e-47 |
| Msa0718040 | Msa1424370 | 0.809796 | 1.585108e-50 | -8.615850e-47 |
| Msa0718040 | Msa1424590 | 0.801896 | 7.252356e-49 | -8.615850e-47 |
| Msa0718040 | Msa1426110 | 0.845920 | 3.005198e-59 | -8.615850e-47 |
| Msa0718040 | Msa1426320 | 0.834459 | 2.960669e-56 | -8.615850e-47 |
| Msa0718040 | Msa1434640 | 0.833404 | 5.438844e-56 | -8.615850e-47 |
| Msa0718040 | Msa1442260 | 0.845512 | 3.877798e-59 | -8.615850e-47 |
| Msa0718040 | Msa1447170 | 0.822124 | 2.802049e-53 | -8.615850e-47 |
| Msa0718040 | Msa1450190 | 0.823045 | 1.710824e-53 | -8.615850e-47 |
| Msa0718040 | Msa1451820 | 0.804456 | 2.141195e-49 | -8.615850e-47 |
| Msa0718040 | Msa1457840 | 0.813607 | 2.350159e-51 | -8.615850e-47 |
| Msa0125590 | Msa0718040 | 0.854582 | 1.118392e-61 | -8.615850e-47 |
| Msa0127340 | Msa0718040 | 0.856286 | 3.565091e-62 | -8.615850e-47 |
| Msa0127680 | Msa0718040 | 0.829457 | 5.094036e-55 | -8.615850e-47 |
| Msa0140380 | Msa0718040 | 0.838739 | 2.404728e-57 | -8.615850e-47 |
| Msa0141640 | Msa0718040 | 0.849103 | 4.007992e-60 | -8.615850e-47 |
| Msa0153210 | Msa0718040 | 0.840948 | 6.391405e-58 | -8.615850e-47 |
| Msa0156050 | Msa0718040 | 0.850774 | 1.366585e-60 | -8.615850e-47 |
| Msa0156090 | Msa0718040 | 0.844476 | 7.383124e-59 | -8.615850e-47 |
| Msa0159590 | Msa0718040 | 0.814155 | 1.779265e-51 | -8.615850e-47 |
| Msa0160170 | Msa0718040 | 0.800702 | 1.273473e-48 | -8.615850e-47 |
| Msa0165830 | Msa0718040 | 0.835071 | 2.076806e-56 | -8.615850e-47 |
| Msa0165840 | Msa0718040 | 0.813699 | 2.242980e-51 | -8.615850e-47 |
| Msa0166170 | Msa0718040 | 0.800728 | 1.257698e-48 | -8.615850e-47 |
| Msa0170070 | Msa0718040 | 0.842062 | 3.251438e-58 | -8.615850e-47 |
| Msa0186000 | Msa0718040 | 0.816243 | 6.115215e-52 | -8.615850e-47 |
| Msa0218020 | Msa0718040 | 0.801019 | 1.096867e-48 | -8.615850e-47 |
| Msa0373170 | Msa0718040 | 0.860979 | 1.415137e-63 | -8.615850e-47 |
| Msa0381730 | Msa0718040 | 0.811044 | 8.521800e-51 | -8.615850e-47 |
| Msa0382230 | Msa0718040 | 0.806067 | 9.849100e-50 | -8.615850e-47 |
| Msa0382740 | Msa0718040 | 0.818586 | 1.814333e-52 | -8.615850e-47 |
| Msa0382770 | Msa0718040 | 0.805216 | 1.485593e-49 | -8.615850e-47 |
| Msa0383000 | Msa0718040 | 0.829913 | 3.944968e-55 | -8.615850e-47 |
| Msa0404770 | Msa0718040 | 0.808808 | 2.581360e-50 | -8.615850e-47 |
| Msa0412130 | Msa0718040 | 0.866041 | 3.810463e-65 | -8.615850e-47 |
| Msa0415140 | Msa0718040 | 0.814836 | 1.257868e-51 | -8.615850e-47 |
| Msa0415820 | Msa0718040 | 0.833430 | 5.357108e-56 | -8.615850e-47 |
| Msa0420430 | Msa0718040 | 0.805869 | 1.083863e-49 | -8.615850e-47 |
| Msa0420670 | Msa0718040 | 0.820374 | 7.095963e-53 | -8.615850e-47 |
| Msa0421130 | Msa0718040 | 0.807992 | 3.855023e-50 | -8.615850e-47 |
| Msa0421750 | Msa0718040 | 0.834918 | 2.270062e-56 | -8.615850e-47 |
| Msa0422050 | Msa0718040 | 0.833530 | 5.059888e-56 | -8.615850e-47 |
| Msa0431200 | Msa0718040 | 0.814741 | 1.320077e-51 | -8.615850e-47 |
| Msa0433150 | Msa0718040 | 0.824269 | 8.846217e-54 | -8.615850e-47 |
| Msa0433760 | Msa0718040 | 0.823644 | 1.239517e-53 | -8.615850e-47 |
| Msa0456670 | Msa0718040 | 0.814512 | 1.483352e-51 | -8.615850e-47 |
| Msa0461550 | Msa0718040 | 0.844501 | 7.272222e-59 | -8.615850e-47 |
| Msa0466520 | Msa0718040 | 0.833949 | 3.973650e-56 | -8.615850e-47 |
| Msa0466880 | Msa0718040 | 0.803177 | 3.947283e-49 | -8.615850e-47 |
| Msa0467690 | Msa0718040 | 0.855331 | 6.780113e-62 | -8.615850e-47 |
| Msa0468700 | Msa0718040 | 0.822995 | 1.757877e-53 | -8.615850e-47 |
| Msa0477630 | Msa0718040 | 0.821413 | 4.091602e-53 | -8.615850e-47 |
| Msa0478140 | Msa0718040 | 0.817374 | 3.408910e-52 | -8.615850e-47 |
| Msa0478200 | Msa0718040 | 0.811710 | 6.109306e-51 | -8.615850e-47 |
| Msa0480730 | Msa0718040 | 0.820659 | 6.101230e-53 | -8.615850e-47 |
| Msa0272260 | Msa0718040 | 0.802418 | 5.662747e-49 | -8.615850e-47 |
| Msa0281540 | Msa0718040 | 0.821661 | 3.585915e-53 | -8.615850e-47 |
| Msa0320250 | Msa0718040 | 0.813589 | 2.371118e-51 | -8.615850e-47 |
| Msa0320270 | Msa0718040 | 0.816161 | 6.378376e-52 | -8.615850e-47 |
| Msa0320290 | Msa0718040 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
| Msa0320580 | Msa0718040 | 0.832796 | 7.703645e-56 | -8.615850e-47 |
| Msa0341680 | Msa0718040 | 0.835114 | 2.025927e-56 | -8.615850e-47 |
| Msa0344110 | Msa0718040 | 0.830943 | 2.209467e-55 | -8.615850e-47 |
| Msa0503990 | Msa0718040 | 0.810900 | 9.160541e-51 | -8.615850e-47 |
| Msa0506540 | Msa0718040 | 0.810534 | 1.099078e-50 | -8.615850e-47 |
| Msa0506880 | Msa0718040 | 0.828145 | 1.058110e-54 | -8.615850e-47 |
| Msa0507810 | Msa0718040 | 0.886577 | 3.031413e-72 | -8.615850e-47 |
| Msa0507820 | Msa0718040 | 0.867731 | 1.102707e-65 | -8.615850e-47 |
| Msa0507920 | Msa0718040 | 0.895621 | 8.052657e-76 | -8.615850e-47 |
| Msa0512530 | Msa0718040 | 0.824904 | 6.269440e-54 | -8.615850e-47 |
| Msa0513080 | Msa0718040 | 0.853267 | 2.675221e-61 | -8.615850e-47 |
| Msa0513560 | Msa0718040 | 0.818248 | 2.164235e-52 | -8.615850e-47 |
| Msa0514020 | Msa0718040 | 0.834459 | 2.961704e-56 | -8.615850e-47 |
| Msa0514580 | Msa0718040 | 0.812488 | 4.134621e-51 | -8.615850e-47 |
| Msa0520260 | Msa0718040 | 0.810598 | 1.064266e-50 | -8.615850e-47 |
| Msa0520870 | Msa0718040 | 0.833199 | 6.115628e-56 | -8.615850e-47 |
| Msa0521680 | Msa0718040 | 0.827988 | 1.154064e-54 | -8.615850e-47 |
| Msa0524320 | Msa0718040 | 0.805677 | 1.189392e-49 | -8.615850e-47 |
| Msa0524430 | Msa0718040 | 0.809939 | 1.476714e-50 | -8.615850e-47 |
| Msa0524520 | Msa0718040 | 0.834107 | 3.628891e-56 | -8.615850e-47 |
| Msa0524800 | Msa0718040 | 0.817751 | 2.803356e-52 | -8.615850e-47 |
| Msa0525000 | Msa0718040 | 0.816545 | 5.232113e-52 | -8.615850e-47 |
| Msa0527850 | Msa0718040 | 0.837817 | 4.156444e-57 | -8.615850e-47 |
| Msa0537990 | Msa0718040 | 0.846315 | 2.345759e-59 | -8.615850e-47 |
| Msa0541740 | Msa0718040 | 0.826155 | 3.168461e-54 | -8.615850e-47 |
| Msa0544410 | Msa0718040 | 0.830709 | 2.520525e-55 | -8.615850e-47 |
| Msa0548000 | Msa0718040 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0550590 | Msa0718040 | 0.845781 | 3.278934e-59 | -8.615850e-47 |
| Msa0553750 | Msa0718040 | 0.803705 | 3.068624e-49 | -8.615850e-47 |
| Msa0554300 | Msa0718040 | 0.861425 | 1.035230e-63 | -8.615850e-47 |
| Msa0557850 | Msa0718040 | 0.819393 | 1.189399e-52 | -8.615850e-47 |
| Msa0559100 | Msa0718040 | 0.801874 | 7.327078e-49 | -8.615850e-47 |
| Msa0561560 | Msa0718040 | 0.879418 | 1.266663e-69 | -8.615850e-47 |
| Msa0563740 | Msa0718040 | 0.814903 | 1.215109e-51 | -8.615850e-47 |
| Msa0563900 | Msa0718040 | 0.813041 | 3.127826e-51 | -8.615850e-47 |
| Msa0563940 | Msa0718040 | 0.800391 | 1.473619e-48 | -8.615850e-47 |
| Msa0563980 | Msa0718040 | 0.835547 | 1.574927e-56 | -8.615850e-47 |
| Msa0564980 | Msa0718040 | 0.828227 | 1.010972e-54 | -8.615850e-47 |
| Msa0569090 | Msa0718040 | 0.807145 | 5.830819e-50 | -8.615850e-47 |
| Msa0571350 | Msa0718040 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0571620 | Msa0718040 | 0.805440 | 1.333418e-49 | -8.615850e-47 |
| Msa0572830 | Msa0718040 | 0.828976 | 6.664634e-55 | -8.615850e-47 |
| Msa0575710 | Msa0718040 | 0.835454 | 1.662597e-56 | -8.615850e-47 |
| Msa0580200 | Msa0718040 | 0.820437 | 6.862213e-53 | -8.615850e-47 |
| Msa0582460 | Msa0718040 | 0.826828 | 2.189417e-54 | -8.615850e-47 |
| Msa0585340 | Msa0718040 | 0.844557 | 7.023603e-59 | -8.615850e-47 |
| Msa0586200 | Msa0718040 | 0.836528 | 8.878445e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718040 | MtrunA17_Chr5g0407011 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 1.31e-95 | 271 |
| Msa0718040 | MtrunA17_Chr8g0370431 | 67.969 | 128 | 38 | 2 | 1 | 127 | 1 | 126 | 3.35e-53 | 164 |
| Msa0718040 | MtrunA17_Chr3g0143991 | 60.952 | 105 | 33 | 2 | 6 | 105 | 13 | 114 | 1.66e-34 | 117 |
| Msa0718040 | MtrunA17_Chr7g0242251 | 60.000 | 100 | 39 | 1 | 32 | 131 | 47 | 145 | 2.17e-30 | 107 |
| Msa0718040 | MtrunA17_Chr1g0212341 | 48.485 | 99 | 49 | 1 | 32 | 130 | 98 | 194 | 4.78e-25 | 95.1 |
| Msa0718040 | MtrunA17_Chr2g0306571 | 85.714 | 49 | 7 | 0 | 82 | 130 | 144 | 192 | 1.90e-21 | 85.1 |
| Msa0718040 | MtrunA17_Chr4g0052011 | 38.272 | 81 | 50 | 0 | 25 | 105 | 53 | 133 | 2.97e-14 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718040 | AT1G20693.2 | 62.903 | 124 | 40 | 3 | 18 | 139 | 23 | 142 | 5.28e-42 | 136 |
| Msa0718040 | AT1G20693.3 | 64.545 | 110 | 35 | 2 | 18 | 127 | 23 | 128 | 3.88e-38 | 126 |
| Msa0718040 | AT1G20693.1 | 64.545 | 110 | 35 | 2 | 18 | 127 | 23 | 128 | 4.00e-38 | 126 |
| Msa0718040 | AT2G17560.3 | 50.769 | 130 | 61 | 1 | 6 | 135 | 8 | 134 | 1.10e-37 | 125 |
| Msa0718040 | AT1G20696.1 | 66.327 | 98 | 32 | 1 | 30 | 127 | 29 | 125 | 6.10e-37 | 123 |
| Msa0718040 | AT2G17560.2 | 52.033 | 123 | 56 | 1 | 6 | 128 | 8 | 127 | 8.18e-37 | 123 |
| Msa0718040 | AT2G17560.1 | 52.033 | 123 | 56 | 1 | 6 | 128 | 8 | 127 | 8.18e-37 | 123 |
| Msa0718040 | AT3G51880.5 | 61.468 | 109 | 37 | 3 | 24 | 131 | 40 | 144 | 2.06e-35 | 120 |
| Msa0718040 | AT3G51880.1 | 61.468 | 109 | 37 | 3 | 24 | 131 | 40 | 144 | 2.06e-35 | 120 |
| Msa0718040 | AT3G51880.3 | 61.468 | 109 | 37 | 3 | 24 | 131 | 40 | 144 | 2.06e-35 | 120 |
| Msa0718040 | AT3G51880.2 | 61.468 | 109 | 37 | 3 | 24 | 131 | 40 | 144 | 2.47e-35 | 120 |
| Msa0718040 | AT1G20696.2 | 72.368 | 76 | 21 | 0 | 30 | 105 | 29 | 104 | 7.17e-34 | 116 |
| Msa0718040 | AT1G20696.5 | 72.368 | 76 | 21 | 0 | 30 | 105 | 29 | 104 | 8.44e-34 | 115 |
| Msa0718040 | AT3G51880.4 | 60.952 | 105 | 36 | 3 | 24 | 127 | 40 | 140 | 4.88e-33 | 114 |
| Msa0718040 | AT4G35570.1 | 47.222 | 108 | 53 | 1 | 7 | 114 | 9 | 112 | 9.54e-30 | 104 |
| Msa0718040 | AT4G35570.2 | 47.222 | 108 | 53 | 1 | 7 | 114 | 9 | 112 | 9.54e-30 | 104 |
| Msa0718040 | AT1G20696.3 | 56.842 | 95 | 38 | 2 | 44 | 136 | 1 | 94 | 1.34e-26 | 95.9 |
| Msa0718040 | AT1G20696.4 | 57.143 | 84 | 35 | 1 | 44 | 127 | 1 | 83 | 8.84e-24 | 89.0 |
| Msa0718040 | AT5G23420.1 | 46.667 | 75 | 37 | 2 | 28 | 101 | 107 | 179 | 7.89e-14 | 66.2 |
| Msa0718040 | AT4G23800.2 | 49.315 | 73 | 34 | 1 | 32 | 104 | 251 | 320 | 1.10e-12 | 64.3 |
| Msa0718040 | AT4G23800.2 | 41.892 | 74 | 42 | 1 | 32 | 105 | 369 | 441 | 9.10e-12 | 61.6 |
| Msa0718040 | AT4G23800.1 | 49.315 | 73 | 34 | 1 | 32 | 104 | 251 | 320 | 1.18e-12 | 64.3 |
| Msa0718040 | AT4G23800.1 | 41.892 | 74 | 42 | 1 | 32 | 105 | 375 | 447 | 9.58e-12 | 61.6 |
| Msa0718040 | AT2G34450.4 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 2.87e-12 | 60.8 |
| Msa0718040 | AT2G34450.3 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 2.87e-12 | 60.8 |
| Msa0718040 | AT2G34450.1 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 2.87e-12 | 60.8 |
| Msa0718040 | AT2G34450.2 | 36.620 | 71 | 44 | 1 | 36 | 105 | 63 | 133 | 8.30e-12 | 59.3 |
| Msa0718040 | AT4G11080.1 | 42.553 | 94 | 45 | 2 | 32 | 125 | 242 | 326 | 8.32e-12 | 61.6 |
Find 52 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAGGTTGGAATGTAAT+TGG | 0.139942 | 5_1:+12149921 | Msa0718040:three_prime_UTR |
| GACAATGCGTGCTTACAATA+TGG | 0.281097 | 5_1:+12149548 | Msa0718040:CDS |
| GAGAAGAAGATAAAGGGTTT+TGG | 0.284802 | 5_1:-12148695 | None:intergenic |
| GGAGGCCTCTTAGGCTTGTT+AGG | 0.297257 | 5_1:-12148963 | None:intergenic |
| AAAGCACTTGGAGGCCTCTT+AGG | 0.299005 | 5_1:-12148972 | None:intergenic |
| GGTTAGAGAGAAGAAGATAA+AGG | 0.344936 | 5_1:-12148702 | None:intergenic |
| TTGAATTAGGTTGGGAAAGC+TGG | 0.350890 | 5_1:+12149346 | Msa0718040:intron |
| GTTAGAGAGAAGAAGATAAA+GGG | 0.359950 | 5_1:-12148701 | None:intergenic |
| TTATAGGTTGGAATGTAATT+GGG | 0.365371 | 5_1:+12149922 | Msa0718040:three_prime_UTR |
| GTGATGAACAAACAGTTGTT+AGG | 0.366240 | 5_1:+12149971 | Msa0718040:three_prime_UTR |
| AAGCGCAAGGGCGCTGGTAC+TGG | 0.369054 | 5_1:+12148912 | Msa0718040:CDS |
| AATACAGACTCAGTTTGTTA+TGG | 0.379901 | 5_1:+12150064 | Msa0718040:three_prime_UTR |
| TGAGTCTGTATTAATAATAA+AGG | 0.404685 | 5_1:-12150053 | None:intergenic |
| CGTGAATAACAGCATTCAAT+TGG | 0.416609 | 5_1:-12150110 | None:intergenic |
| AGGAGGATGAGGAGTAAAGT+TGG | 0.417672 | 5_1:+12149847 | Msa0718040:exon |
| TTATCAGCCTTAGCATTGAA+TGG | 0.428927 | 5_1:-12149504 | None:intergenic |
| ACAGCAACGGACTTGTTGCT+TGG | 0.433440 | 5_1:-12149236 | None:intergenic |
| TTAGCATCGGAAACAGCTTT+CGG | 0.437399 | 5_1:-12148773 | None:intergenic |
| ATGCTAAACCTGCTGATAAC+CGG | 0.456641 | 5_1:+12148789 | Msa0718040:CDS |
| ACAATGCGTGCTTACAATAT+GGG | 0.459061 | 5_1:+12149549 | Msa0718040:CDS |
| ATCATCATTCACTTCAGACT+TGG | 0.478350 | 5_1:-12149718 | None:intergenic |
| AGTAAAGTTGGTGGTGCTGA+AGG | 0.482862 | 5_1:+12149859 | Msa0718040:exon |
| TGCTAAGGCTGATAAGTTGA+AGG | 0.485540 | 5_1:+12149512 | Msa0718040:CDS |
| CAGCTTTCGGCATGGTGAAA+CGG | 0.496316 | 5_1:-12148760 | None:intergenic |
| GAATCTCACCGGTTATCAGC+AGG | 0.496399 | 5_1:-12148797 | None:intergenic |
| GTTCAGAGAGAGGTTTAAGA+AGG | 0.508587 | 5_1:+12149208 | Msa0718040:CDS |
| GGAAAGCTGGTGGAAAGGAA+TGG | 0.519414 | 5_1:+12149359 | Msa0718040:CDS |
| AGGTTGAAGCGCAAGGGCGC+TGG | 0.524589 | 5_1:+12148906 | Msa0718040:intron |
| GTTTGTTAGGTTGAAGCGCA+AGG | 0.526395 | 5_1:+12148899 | Msa0718040:intron |
| AAGAATGCTTCTGAGGAAGA+AGG | 0.530721 | 5_1:+12149684 | Msa0718040:CDS |
| AATTAGGTTGGGAAAGCTGG+TGG | 0.535794 | 5_1:+12149349 | Msa0718040:intron |
| TCTGTATTAATAATAAAGGT+GGG | 0.545181 | 5_1:-12150049 | None:intergenic |
| GGTTGGGAAAGCTGGTGGAA+AGG | 0.549667 | 5_1:+12149354 | Msa0718040:intron |
| AGGATCCTAACAAGCCTAAG+AGG | 0.555088 | 5_1:+12148958 | Msa0718040:CDS |
| AAAACGAAGAAAGCACTTGG+AGG | 0.557236 | 5_1:-12148981 | None:intergenic |
| TTTGTTAGGTTGAAGCGCAA+GGG | 0.561375 | 5_1:+12148900 | Msa0718040:intron |
| GTCTGTATTAATAATAAAGG+TGG | 0.565564 | 5_1:-12150050 | None:intergenic |
| TAAGGCTCCATTCAATGCTA+AGG | 0.574542 | 5_1:+12149497 | Msa0718040:CDS |
| AGGATGAGGAGTAAAGTTGG+TGG | 0.574604 | 5_1:+12149850 | Msa0718040:exon |
| GACTGAGAAGAATGCTTCTG+AGG | 0.577758 | 5_1:+12149677 | Msa0718040:intron |
| ATGAAAACGAAGAAAGCACT+TGG | 0.589018 | 5_1:-12148984 | None:intergenic |
| GTTAGGTTTATATTAGCGCA+TGG | 0.590550 | 5_1:+12149988 | Msa0718040:three_prime_UTR |
| GTGAATGATGATGATGAGGA+TGG | 0.602793 | 5_1:+12149729 | Msa0718040:CDS |
| AAGCAACAAGTCCGTTGCTG+TGG | 0.608709 | 5_1:+12149238 | Msa0718040:CDS |
| GTTATCAGCAGGTTTAGCAT+CGG | 0.618036 | 5_1:-12148786 | None:intergenic |
| GGTGCTGAAGGAAGAAGCGT+AGG | 0.622139 | 5_1:+12149871 | Msa0718040:three_prime_UTR |
| TTAGGTCTGAGTTCAGAGAG+AGG | 0.622758 | 5_1:+12149198 | Msa0718040:intron |
| CAGAAATCTCACCACAGCAA+CGG | 0.627421 | 5_1:-12149249 | None:intergenic |
| ATCGGAAACAGCTTTCGGCA+TGG | 0.634546 | 5_1:-12148768 | None:intergenic |
| TGAAGTGAATGATGATGATG+AGG | 0.653732 | 5_1:+12149725 | Msa0718040:CDS |
| TAAGCAATCGAAGAAAGCGA+AGG | 0.658279 | 5_1:+12148938 | Msa0718040:CDS |
| TAAGGCTGATAAGTTGAAGG+AGG | 0.688265 | 5_1:+12149515 | Msa0718040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTATTCTATAATTTTTT+AGG | + | chr5_1:12149780-12149799 | Msa0718040:intron | 10.0% |
| !!! | AGAATAATTTTCATTATTAT+AGG | + | chr5_1:12149906-12149925 | Msa0718040:three_prime_UTR | 10.0% |
| !!! | GTATTATTCTATAATTTTTT+AGG | + | chr5_1:12149780-12149799 | Msa0718040:intron | 10.0% |
| !!! | AGAATAATTTTCATTATTAT+AGG | + | chr5_1:12149906-12149925 | Msa0718040:three_prime_UTR | 10.0% |
| !!! | TTTTTGATTTTTTGTTTGTT+AGG | + | chr5_1:12148886-12148905 | Msa0718040:intron | 15.0% |
| !! | TTCATAAAAATCAAATTCAA+CGG | - | chr5_1:12149292-12149311 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTATTATAGGT+TGG | + | chr5_1:12149910-12149929 | Msa0718040:three_prime_UTR | 15.0% |
| !!! | TTTTTGATTTTTTGTTTGTT+AGG | + | chr5_1:12148886-12148905 | Msa0718040:intron | 15.0% |
| !! | TTCATAAAAATCAAATTCAA+CGG | - | chr5_1:12149292-12149311 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTATTATAGGT+TGG | + | chr5_1:12149910-12149929 | Msa0718040:three_prime_UTR | 15.0% |
| !!! | TTTTTTCGTTTATTGAGTTT+TGG | + | chr5_1:12149103-12149122 | Msa0718040:intron | 20.0% |
| !!! | ATTTTTGTTTTGCGTTTTTT+AGG | + | chr5_1:12149180-12149199 | Msa0718040:intron | 20.0% |
| !!! | CTAAATTTTAATTAGCGTTT+TGG | + | chr5_1:12149438-12149457 | Msa0718040:intron | 20.0% |
| !!! | TTTTGTGATATGTGTATTTT+AGG | + | chr5_1:12149473-12149492 | Msa0718040:intron | 20.0% |
| !!! | TTTCATCATTTTATGTTTTC+AGG | + | chr5_1:12149824-12149843 | Msa0718040:intron | 20.0% |
| !! | TCTGTATTAATAATAAAGGT+GGG | - | chr5_1:12150052-12150071 | None:intergenic | 20.0% |
| !! | TGAGTCTGTATTAATAATAA+AGG | - | chr5_1:12150056-12150075 | None:intergenic | 20.0% |
| !!! | TTTTTTCGTTTATTGAGTTT+TGG | + | chr5_1:12149103-12149122 | Msa0718040:intron | 20.0% |
| !!! | ATTTTTGTTTTGCGTTTTTT+AGG | + | chr5_1:12149180-12149199 | Msa0718040:intron | 20.0% |
| !!! | CTAAATTTTAATTAGCGTTT+TGG | + | chr5_1:12149438-12149457 | Msa0718040:intron | 20.0% |
| !!! | TTTTGTGATATGTGTATTTT+AGG | + | chr5_1:12149473-12149492 | Msa0718040:intron | 20.0% |
| !!! | TTTCATCATTTTATGTTTTC+AGG | + | chr5_1:12149824-12149843 | Msa0718040:intron | 20.0% |
| !! | TCTGTATTAATAATAAAGGT+GGG | - | chr5_1:12150052-12150071 | None:intergenic | 20.0% |
| !! | TGAGTCTGTATTAATAATAA+AGG | - | chr5_1:12150056-12150075 | None:intergenic | 20.0% |
| ! | AGAATCAAATCAAACTTCAA+CGG | - | chr5_1:12149156-12149175 | None:intergenic | 25.0% |
| !! | TCTAACGTGATTTTTGAATT+AGG | + | chr5_1:12149333-12149352 | Msa0718040:intron | 25.0% |
| !!! | GATATGTGTATTTTAGGATA+AGG | + | chr5_1:12149479-12149498 | Msa0718040:intron | 25.0% |
| !!! | TTGCTGATTTGAACTAATTT+TGG | + | chr5_1:12149647-12149666 | Msa0718040:intron | 25.0% |
| !! | ATTATAGGTTGGAATGTAAT+TGG | + | chr5_1:12149921-12149940 | Msa0718040:three_prime_UTR | 25.0% |
| !! | TTATAGGTTGGAATGTAATT+GGG | + | chr5_1:12149922-12149941 | Msa0718040:three_prime_UTR | 25.0% |
| ! | GTCTGTATTAATAATAAAGG+TGG | - | chr5_1:12150053-12150072 | None:intergenic | 25.0% |
| ! | AGAATCAAATCAAACTTCAA+CGG | - | chr5_1:12149156-12149175 | None:intergenic | 25.0% |
| !! | TCTAACGTGATTTTTGAATT+AGG | + | chr5_1:12149333-12149352 | Msa0718040:intron | 25.0% |
| !!! | GATATGTGTATTTTAGGATA+AGG | + | chr5_1:12149479-12149498 | Msa0718040:intron | 25.0% |
| !!! | TTGCTGATTTGAACTAATTT+TGG | + | chr5_1:12149647-12149666 | Msa0718040:intron | 25.0% |
| !! | ATTATAGGTTGGAATGTAAT+TGG | + | chr5_1:12149921-12149940 | Msa0718040:three_prime_UTR | 25.0% |
| !! | TTATAGGTTGGAATGTAATT+GGG | + | chr5_1:12149922-12149941 | Msa0718040:three_prime_UTR | 25.0% |
| ! | GTCTGTATTAATAATAAAGG+TGG | - | chr5_1:12150053-12150072 | None:intergenic | 25.0% |
| GTTAGAGAGAAGAAGATAAA+GGG | - | chr5_1:12148704-12148723 | None:intergenic | 30.0% | |
| ! | CTTCGTTTTCATGTAAGATT+CGG | + | chr5_1:12148995-12149014 | Msa0718040:intron | 30.0% |
| ! | ACGTGATTTTTGAATTAGGT+TGG | + | chr5_1:12149337-12149356 | Msa0718040:intron | 30.0% |
| ! | CGTGATTTTTGAATTAGGTT+GGG | + | chr5_1:12149338-12149357 | Msa0718040:intron | 30.0% |
| ! | TTCACTGTTCTGATTTTACT+CGG | + | chr5_1:12149613-12149632 | Msa0718040:intron | 30.0% |
| !! | CATCATTTTATGTTTTCAGG+AGG | + | chr5_1:12149827-12149846 | Msa0718040:intron | 30.0% |
| !! | AATACAGACTCAGTTTGTTA+TGG | + | chr5_1:12150064-12150083 | Msa0718040:three_prime_UTR | 30.0% |
| GTTAGAGAGAAGAAGATAAA+GGG | - | chr5_1:12148704-12148723 | None:intergenic | 30.0% | |
| ! | CTTCGTTTTCATGTAAGATT+CGG | + | chr5_1:12148995-12149014 | Msa0718040:intron | 30.0% |
| ! | ACGTGATTTTTGAATTAGGT+TGG | + | chr5_1:12149337-12149356 | Msa0718040:intron | 30.0% |
| ! | CGTGATTTTTGAATTAGGTT+GGG | + | chr5_1:12149338-12149357 | Msa0718040:intron | 30.0% |
| ! | TTCACTGTTCTGATTTTACT+CGG | + | chr5_1:12149613-12149632 | Msa0718040:intron | 30.0% |
| !! | CATCATTTTATGTTTTCAGG+AGG | + | chr5_1:12149827-12149846 | Msa0718040:intron | 30.0% |
| !! | AATACAGACTCAGTTTGTTA+TGG | + | chr5_1:12150064-12150083 | Msa0718040:three_prime_UTR | 30.0% |
| ! | GAGAAGAAGATAAAGGGTTT+TGG | - | chr5_1:12148698-12148717 | None:intergenic | 35.0% |
| GGTTAGAGAGAAGAAGATAA+AGG | - | chr5_1:12148705-12148724 | None:intergenic | 35.0% | |
| !! | ATGAAAACGAAGAAAGCACT+TGG | - | chr5_1:12148987-12149006 | None:intergenic | 35.0% |
| GTGCTAAAAGTTGTTCGAAT+CGG | + | chr5_1:12149017-12149036 | Msa0718040:intron | 35.0% | |
| ! | TTATCAGCCTTAGCATTGAA+TGG | - | chr5_1:12149507-12149526 | None:intergenic | 35.0% |
| ACAATGCGTGCTTACAATAT+GGG | + | chr5_1:12149549-12149568 | Msa0718040:CDS | 35.0% | |
| ATCATCATTCACTTCAGACT+TGG | - | chr5_1:12149721-12149740 | None:intergenic | 35.0% | |
| ! | TGAAGTGAATGATGATGATG+AGG | + | chr5_1:12149725-12149744 | Msa0718040:CDS | 35.0% |
| !! | CATTTTATGTTTTCAGGAGG+AGG | + | chr5_1:12149830-12149849 | Msa0718040:intron | 35.0% |
| GTGATGAACAAACAGTTGTT+AGG | + | chr5_1:12149971-12149990 | Msa0718040:three_prime_UTR | 35.0% | |
| GTTAGGTTTATATTAGCGCA+TGG | + | chr5_1:12149988-12150007 | Msa0718040:three_prime_UTR | 35.0% | |
| CGTGAATAACAGCATTCAAT+TGG | - | chr5_1:12150113-12150132 | None:intergenic | 35.0% | |
| ! | GAGAAGAAGATAAAGGGTTT+TGG | - | chr5_1:12148698-12148717 | None:intergenic | 35.0% |
| GGTTAGAGAGAAGAAGATAA+AGG | - | chr5_1:12148705-12148724 | None:intergenic | 35.0% | |
| !! | ATGAAAACGAAGAAAGCACT+TGG | - | chr5_1:12148987-12149006 | None:intergenic | 35.0% |
| GTGCTAAAAGTTGTTCGAAT+CGG | + | chr5_1:12149017-12149036 | Msa0718040:intron | 35.0% | |
| ! | TTATCAGCCTTAGCATTGAA+TGG | - | chr5_1:12149507-12149526 | None:intergenic | 35.0% |
| ACAATGCGTGCTTACAATAT+GGG | + | chr5_1:12149549-12149568 | Msa0718040:CDS | 35.0% | |
| ATCATCATTCACTTCAGACT+TGG | - | chr5_1:12149721-12149740 | None:intergenic | 35.0% | |
| ! | TGAAGTGAATGATGATGATG+AGG | + | chr5_1:12149725-12149744 | Msa0718040:CDS | 35.0% |
| !! | CATTTTATGTTTTCAGGAGG+AGG | + | chr5_1:12149830-12149849 | Msa0718040:intron | 35.0% |
| GTGATGAACAAACAGTTGTT+AGG | + | chr5_1:12149971-12149990 | Msa0718040:three_prime_UTR | 35.0% | |
| GTTAGGTTTATATTAGCGCA+TGG | + | chr5_1:12149988-12150007 | Msa0718040:three_prime_UTR | 35.0% | |
| CGTGAATAACAGCATTCAAT+TGG | - | chr5_1:12150113-12150132 | None:intergenic | 35.0% | |
| AGAGAGAGAGAGAGAGAAAA+CGG | - | chr5_1:12148726-12148745 | None:intergenic | 40.0% | |
| ! | TTAGCATCGGAAACAGCTTT+CGG | - | chr5_1:12148776-12148795 | None:intergenic | 40.0% |
| GTTATCAGCAGGTTTAGCAT+CGG | - | chr5_1:12148789-12148808 | None:intergenic | 40.0% | |
| ATGCTAAACCTGCTGATAAC+CGG | + | chr5_1:12148789-12148808 | Msa0718040:CDS | 40.0% | |
| AGAATCACGAATCTCGAAGT+CGG | - | chr5_1:12148828-12148847 | None:intergenic | 40.0% | |
| TCGAGATTCGTGATTCTCAT+CGG | + | chr5_1:12148831-12148850 | Msa0718040:intron | 40.0% | |
| !! | TTTGTTAGGTTGAAGCGCAA+GGG | + | chr5_1:12148900-12148919 | Msa0718040:intron | 40.0% |
| TAAGCAATCGAAGAAAGCGA+AGG | + | chr5_1:12148938-12148957 | Msa0718040:CDS | 40.0% | |
| !! | AAAACGAAGAAAGCACTTGG+AGG | - | chr5_1:12148984-12149003 | None:intergenic | 40.0% |
| GTTCAGAGAGAGGTTTAAGA+AGG | + | chr5_1:12149208-12149227 | Msa0718040:CDS | 40.0% | |
| !! | TTGAATTAGGTTGGGAAAGC+TGG | + | chr5_1:12149346-12149365 | Msa0718040:intron | 40.0% |
| TAAGGCTCCATTCAATGCTA+AGG | + | chr5_1:12149497-12149516 | Msa0718040:CDS | 40.0% | |
| ! | TGCTAAGGCTGATAAGTTGA+AGG | + | chr5_1:12149512-12149531 | Msa0718040:CDS | 40.0% |
| ! | TAAGGCTGATAAGTTGAAGG+AGG | + | chr5_1:12149515-12149534 | Msa0718040:CDS | 40.0% |
| GACAATGCGTGCTTACAATA+TGG | + | chr5_1:12149548-12149567 | Msa0718040:CDS | 40.0% | |
| ! | AAGAATGCTTCTGAGGAAGA+AGG | + | chr5_1:12149684-12149703 | Msa0718040:CDS | 40.0% |
| ! | GTGAATGATGATGATGAGGA+TGG | + | chr5_1:12149729-12149748 | Msa0718040:CDS | 40.0% |
| AGAGAGAGAGAGAGAGAAAA+CGG | - | chr5_1:12148726-12148745 | None:intergenic | 40.0% | |
| ! | TTAGCATCGGAAACAGCTTT+CGG | - | chr5_1:12148776-12148795 | None:intergenic | 40.0% |
| GTTATCAGCAGGTTTAGCAT+CGG | - | chr5_1:12148789-12148808 | None:intergenic | 40.0% | |
| ATGCTAAACCTGCTGATAAC+CGG | + | chr5_1:12148789-12148808 | Msa0718040:CDS | 40.0% | |
| AGAATCACGAATCTCGAAGT+CGG | - | chr5_1:12148828-12148847 | None:intergenic | 40.0% | |
| TCGAGATTCGTGATTCTCAT+CGG | + | chr5_1:12148831-12148850 | Msa0718040:intron | 40.0% | |
| !! | TTTGTTAGGTTGAAGCGCAA+GGG | + | chr5_1:12148900-12148919 | Msa0718040:intron | 40.0% |
| TAAGCAATCGAAGAAAGCGA+AGG | + | chr5_1:12148938-12148957 | Msa0718040:CDS | 40.0% | |
| !! | AAAACGAAGAAAGCACTTGG+AGG | - | chr5_1:12148984-12149003 | None:intergenic | 40.0% |
| GTTCAGAGAGAGGTTTAAGA+AGG | + | chr5_1:12149208-12149227 | Msa0718040:CDS | 40.0% | |
| !! | TTGAATTAGGTTGGGAAAGC+TGG | + | chr5_1:12149346-12149365 | Msa0718040:intron | 40.0% |
| TAAGGCTCCATTCAATGCTA+AGG | + | chr5_1:12149497-12149516 | Msa0718040:CDS | 40.0% | |
| ! | TGCTAAGGCTGATAAGTTGA+AGG | + | chr5_1:12149512-12149531 | Msa0718040:CDS | 40.0% |
| ! | TAAGGCTGATAAGTTGAAGG+AGG | + | chr5_1:12149515-12149534 | Msa0718040:CDS | 40.0% |
| GACAATGCGTGCTTACAATA+TGG | + | chr5_1:12149548-12149567 | Msa0718040:CDS | 40.0% | |
| ! | AAGAATGCTTCTGAGGAAGA+AGG | + | chr5_1:12149684-12149703 | Msa0718040:CDS | 40.0% |
| ! | GTGAATGATGATGATGAGGA+TGG | + | chr5_1:12149729-12149748 | Msa0718040:CDS | 40.0% |
| AGTCGGAAGAAGAATCTCAC+CGG | - | chr5_1:12148811-12148830 | None:intergenic | 45.0% | |
| !! | GTTTGTTAGGTTGAAGCGCA+AGG | + | chr5_1:12148899-12148918 | Msa0718040:intron | 45.0% |
| AGGATCCTAACAAGCCTAAG+AGG | + | chr5_1:12148958-12148977 | Msa0718040:CDS | 45.0% | |
| TTAGGTCTGAGTTCAGAGAG+AGG | + | chr5_1:12149198-12149217 | Msa0718040:intron | 45.0% | |
| CAGAAATCTCACCACAGCAA+CGG | - | chr5_1:12149252-12149271 | None:intergenic | 45.0% | |
| !! | AATTAGGTTGGGAAAGCTGG+TGG | + | chr5_1:12149349-12149368 | Msa0718040:intron | 45.0% |
| GACTGAGAAGAATGCTTCTG+AGG | + | chr5_1:12149677-12149696 | Msa0718040:intron | 45.0% | |
| !! | ATGTTTTCAGGAGGAGGATG+AGG | + | chr5_1:12149836-12149855 | Msa0718040:intron | 45.0% |
| AGGAGGATGAGGAGTAAAGT+TGG | + | chr5_1:12149847-12149866 | Msa0718040:exon | 45.0% | |
| AGGATGAGGAGTAAAGTTGG+TGG | + | chr5_1:12149850-12149869 | Msa0718040:exon | 45.0% | |
| !! | AGTAAAGTTGGTGGTGCTGA+AGG | + | chr5_1:12149859-12149878 | Msa0718040:exon | 45.0% |
| AGTCGGAAGAAGAATCTCAC+CGG | - | chr5_1:12148811-12148830 | None:intergenic | 45.0% | |
| !! | GTTTGTTAGGTTGAAGCGCA+AGG | + | chr5_1:12148899-12148918 | Msa0718040:intron | 45.0% |
| AGGATCCTAACAAGCCTAAG+AGG | + | chr5_1:12148958-12148977 | Msa0718040:CDS | 45.0% | |
| TTAGGTCTGAGTTCAGAGAG+AGG | + | chr5_1:12149198-12149217 | Msa0718040:intron | 45.0% | |
| CAGAAATCTCACCACAGCAA+CGG | - | chr5_1:12149252-12149271 | None:intergenic | 45.0% | |
| !! | AATTAGGTTGGGAAAGCTGG+TGG | + | chr5_1:12149349-12149368 | Msa0718040:intron | 45.0% |
| GACTGAGAAGAATGCTTCTG+AGG | + | chr5_1:12149677-12149696 | Msa0718040:intron | 45.0% | |
| !! | ATGTTTTCAGGAGGAGGATG+AGG | + | chr5_1:12149836-12149855 | Msa0718040:intron | 45.0% |
| AGGAGGATGAGGAGTAAAGT+TGG | + | chr5_1:12149847-12149866 | Msa0718040:exon | 45.0% | |
| AGGATGAGGAGTAAAGTTGG+TGG | + | chr5_1:12149850-12149869 | Msa0718040:exon | 45.0% | |
| !! | AGTAAAGTTGGTGGTGCTGA+AGG | + | chr5_1:12149859-12149878 | Msa0718040:exon | 45.0% |
| CAGCTTTCGGCATGGTGAAA+CGG | - | chr5_1:12148763-12148782 | None:intergenic | 50.0% | |
| ATCGGAAACAGCTTTCGGCA+TGG | - | chr5_1:12148771-12148790 | None:intergenic | 50.0% | |
| ! | GAATCTCACCGGTTATCAGC+AGG | - | chr5_1:12148800-12148819 | None:intergenic | 50.0% |
| ! | AAAGCACTTGGAGGCCTCTT+AGG | - | chr5_1:12148975-12148994 | None:intergenic | 50.0% |
| !! | ACAGCAACGGACTTGTTGCT+TGG | - | chr5_1:12149239-12149258 | None:intergenic | 50.0% |
| AAGCAACAAGTCCGTTGCTG+TGG | + | chr5_1:12149238-12149257 | Msa0718040:CDS | 50.0% | |
| GGAAAGCTGGTGGAAAGGAA+TGG | + | chr5_1:12149359-12149378 | Msa0718040:CDS | 50.0% | |
| AAGCTCTGTCTGATGCTGTG+AGG | + | chr5_1:12149383-12149402 | Msa0718040:intron | 50.0% | |
| CAGCTTTCGGCATGGTGAAA+CGG | - | chr5_1:12148763-12148782 | None:intergenic | 50.0% | |
| ATCGGAAACAGCTTTCGGCA+TGG | - | chr5_1:12148771-12148790 | None:intergenic | 50.0% | |
| ! | GAATCTCACCGGTTATCAGC+AGG | - | chr5_1:12148800-12148819 | None:intergenic | 50.0% |
| ! | AAAGCACTTGGAGGCCTCTT+AGG | - | chr5_1:12148975-12148994 | None:intergenic | 50.0% |
| !! | ACAGCAACGGACTTGTTGCT+TGG | - | chr5_1:12149239-12149258 | None:intergenic | 50.0% |
| AAGCAACAAGTCCGTTGCTG+TGG | + | chr5_1:12149238-12149257 | Msa0718040:CDS | 50.0% | |
| GGAAAGCTGGTGGAAAGGAA+TGG | + | chr5_1:12149359-12149378 | Msa0718040:CDS | 50.0% | |
| AAGCTCTGTCTGATGCTGTG+AGG | + | chr5_1:12149383-12149402 | Msa0718040:intron | 50.0% | |
| ! | GGAGGCCTCTTAGGCTTGTT+AGG | - | chr5_1:12148966-12148985 | None:intergenic | 55.0% |
| GGTTGGGAAAGCTGGTGGAA+AGG | + | chr5_1:12149354-12149373 | Msa0718040:intron | 55.0% | |
| ! | GGTGCTGAAGGAAGAAGCGT+AGG | + | chr5_1:12149871-12149890 | Msa0718040:three_prime_UTR | 55.0% |
| ! | GGAGGCCTCTTAGGCTTGTT+AGG | - | chr5_1:12148966-12148985 | None:intergenic | 55.0% |
| GGTTGGGAAAGCTGGTGGAA+AGG | + | chr5_1:12149354-12149373 | Msa0718040:intron | 55.0% | |
| ! | GGTGCTGAAGGAAGAAGCGT+AGG | + | chr5_1:12149871-12149890 | Msa0718040:three_prime_UTR | 55.0% |
| ! | AGGTTGAAGCGCAAGGGCGC+TGG | + | chr5_1:12148906-12148925 | Msa0718040:intron | 65.0% |
| !! | AAGCGCAAGGGCGCTGGTAC+TGG | + | chr5_1:12148912-12148931 | Msa0718040:CDS | 65.0% |
| ! | AGGTTGAAGCGCAAGGGCGC+TGG | + | chr5_1:12148906-12148925 | Msa0718040:intron | 65.0% |
| !! | AAGCGCAAGGGCGCTGGTAC+TGG | + | chr5_1:12148912-12148931 | Msa0718040:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 12148674 | 12150160 | 12148674 | ID=Msa0718040;Name=Msa0718040 |
| chr5_1 | mRNA | 12148674 | 12150160 | 12148674 | ID=Msa0718040-mRNA-1;Parent=Msa0718040;Name=Msa0718040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=96|1|1|1|1|1|7|297|140 |
| chr5_1 | exon | 12148674 | 12148810 | 12148674 | ID=Msa0718040-mRNA-1:exon:4905;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12148908 | 12149006 | 12148908 | ID=Msa0718040-mRNA-1:exon:4906;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12149202 | 12149259 | 12149202 | ID=Msa0718040-mRNA-1:exon:4907;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12149355 | 12149399 | 12149355 | ID=Msa0718040-mRNA-1:exon:4908;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12149495 | 12149575 | 12149495 | ID=Msa0718040-mRNA-1:exon:4909;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12149678 | 12149758 | 12149678 | ID=Msa0718040-mRNA-1:exon:4910;Parent=Msa0718040-mRNA-1 |
| chr5_1 | exon | 12149846 | 12150160 | 12149846 | ID=Msa0718040-mRNA-1:exon:4911;Parent=Msa0718040-mRNA-1 |
| chr5_1 | five_prime_UTR | 12148674 | 12148769 | 12148674 | ID=Msa0718040-mRNA-1:five_prime_utr;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12148770 | 12148810 | 12148770 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12148908 | 12149006 | 12148908 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12149202 | 12149259 | 12149202 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12149355 | 12149399 | 12149355 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12149495 | 12149575 | 12149495 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12149678 | 12149758 | 12149678 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | CDS | 12149846 | 12149863 | 12149846 | ID=Msa0718040-mRNA-1:cds;Parent=Msa0718040-mRNA-1 |
| chr5_1 | three_prime_UTR | 12149864 | 12150160 | 12149864 | ID=Msa0718040-mRNA-1:three_prime_utr;Parent=Msa0718040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
