AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1071410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071410 MtrunA17_Chr5g0395821 99.119 454 4 0 1 454 1 454 0.0 937
Msa1071410 MtrunA17_Chr3g0098921 91.503 459 34 4 1 454 1 459 0.0 872
Msa1071410 MtrunA17_Chr7g0267961 75.223 448 105 5 12 454 11 457 0.0 707
Msa1071410 MtrunA17_Chr7g0233651 66.966 445 126 7 15 454 3 431 0.0 591
Msa1071410 MtrunA17_Chr7g0235181 65.011 443 135 7 14 454 2 426 0.0 563
Msa1071410 MtrunA17_Chr7g0234591 61.607 448 147 8 17 454 4 436 0.0 537
Msa1071410 MtrunA17_Chr7g0228191 71.160 319 90 1 124 440 13 331 9.00e-173 488
Msa1071410 MtrunA17_Chr2g0330681 54.499 389 149 9 25 408 4 369 2.49e-131 384
Msa1071410 MtrunA17_Chr2g0330601 58.055 329 106 4 126 452 71 369 2.64e-127 374
Msa1071410 MtrunA17_Chr4g0057131 41.611 447 218 9 11 433 29 456 3.72e-113 341
Msa1071410 MtrunA17_Chr3g0111961 53.618 304 133 4 126 429 168 463 1.18e-112 340
Msa1071410 MtrunA17_Chr2g0308501 49.840 313 147 5 123 430 4 311 1.03e-107 322
Msa1071410 MtrunA17_Chr2g0281451 27.386 241 156 9 140 374 18 245 1.23e-17 85.9
Msa1071410 MtrunA17_Chr6g0448921 26.891 238 155 9 140 371 19 243 2.76e-15 78.6
Msa1071410 MtrunA17_Chr5g0401671 23.630 292 162 8 143 426 312 550 6.54e-15 77.0
Msa1071410 MtrunA17_Chr4g0053651 26.336 262 168 11 177 427 287 534 2.15e-14 75.5
Msa1071410 MtrunA17_Chr1g0176241 27.778 252 152 11 182 426 253 481 2.81e-14 74.7
Msa1071410 MtrunA17_Chr1g0176241 25.510 294 156 10 182 428 122 399 1.17e-13 72.8
Msa1071410 MtrunA17_Chr5g0401661 23.121 346 192 10 83 426 367 640 1.35e-13 73.2
Msa1071410 MtrunA17_Chr3g0136971 24.194 310 192 9 155 434 326 622 1.22e-12 70.1
Msa1071410 MtrunA17_Chr3g0136971 27.273 198 129 7 150 345 434 618 2.14e-12 69.3
Msa1071410 MtrunA17_Chr1g0172501 24.000 300 173 10 178 433 271 559 2.52e-12 68.9
Msa1071410 MtrunA17_Chr3g0093681 24.000 300 173 10 178 433 271 559 9.88e-12 67.0
Msa1071410 MtrunA17_Chr5g0405851 27.374 179 118 5 166 342 240 408 2.00e-11 65.9
Msa1071410 MtrunA17_Chr7g0253861 22.857 210 150 4 220 427 53 252 5.46e-11 63.9
Msa1071410 MtrunA17_Chr1g0185501 26.768 198 128 6 150 341 126 312 6.70e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071410 AT4G33270.1 79.778 450 89 2 7 454 8 457 0.0 759
Msa1071410 AT4G33260.1 80.317 442 85 2 15 454 6 447 0.0 737
Msa1071410 AT4G33260.2 80.535 411 78 2 15 423 6 416 0.0 701
Msa1071410 AT5G27570.1 69.623 451 130 5 7 454 4 450 0.0 642
Msa1071410 AT5G27080.1 69.585 434 126 4 23 454 13 442 0.0 623
Msa1071410 AT5G26900.1 68.578 436 132 3 20 454 13 444 0.0 612
Msa1071410 AT5G27945.1 62.634 372 123 5 95 454 61 428 1.46e-162 466
Msa1071410 AT4G22910.1 42.822 411 217 4 33 433 62 464 3.39e-115 347
Msa1071410 AT5G13840.1 51.974 304 138 3 126 429 163 458 1.17e-110 335
Msa1071410 AT5G13840.2 51.974 304 138 3 126 429 163 458 1.17e-110 335
Msa1071410 AT4G11920.1 41.556 450 227 9 5 433 22 456 2.36e-110 334
Msa1071410 AT1G11160.4 29.101 189 119 7 159 345 40 215 3.86e-16 81.6
Msa1071410 AT1G11160.2 29.101 189 119 7 159 345 40 215 4.24e-16 81.6
Msa1071410 AT1G11160.1 29.101 189 119 7 159 345 40 215 4.36e-16 81.6
Msa1071410 AT5G08390.1 26.891 238 155 9 140 371 19 243 9.51e-16 80.5
Msa1071410 AT1G61210.3 26.201 229 141 8 138 351 6 221 1.51e-15 80.1
Msa1071410 AT1G61210.2 26.201 229 141 8 138 351 6 221 1.71e-15 79.7
Msa1071410 AT1G61210.1 26.201 229 141 8 138 351 6 221 1.72e-15 79.7
Msa1071410 AT1G11160.3 29.341 167 105 6 181 345 18 173 1.98e-15 79.3
Msa1071410 AT5G23430.1 27.189 217 140 8 140 351 19 222 1.36e-14 76.6
Msa1071410 AT5G23430.3 27.189 217 140 8 140 351 19 222 1.41e-14 76.6
Msa1071410 AT5G23430.2 27.189 217 140 8 140 351 19 222 1.41e-14 76.6
Msa1071410 AT5G52820.1 27.451 255 152 12 182 428 244 473 7.98e-14 73.9
Msa1071410 AT5G25150.1 26.000 300 183 10 155 428 329 615 2.42e-13 72.8
Msa1071410 AT5G25150.1 27.551 196 127 7 150 343 433 615 1.97e-11 66.6
Msa1071410 AT5G25150.2 26.000 300 183 10 155 428 329 615 2.88e-13 72.4
Msa1071410 AT5G25150.2 27.551 196 127 7 150 343 433 615 2.18e-11 66.6
Msa1071410 AT3G49660.1 23.922 255 175 9 178 426 71 312 7.49e-13 69.7
Msa1071410 AT3G49660.1 25.373 201 125 9 150 341 128 312 9.93e-11 63.2
Msa1071410 AT5G56130.1 23.077 208 117 4 259 427 16 219 1.06e-11 66.2
Msa1071410 AT5G67320.1 24.221 289 166 12 143 427 330 569 1.55e-11 67.0
Msa1071410 AT2G41500.1 25.614 285 153 11 149 430 311 539 1.60e-11 66.6
Msa1071410 AT2G41500.2 25.614 285 153 11 149 430 311 539 1.60e-11 66.6
Msa1071410 AT5G16750.1 25.238 210 144 7 149 354 32 232 1.90e-11 67.0
Msa1071410 AT2G32700.6 24.453 274 180 13 159 426 532 784 4.42e-11 65.9
Msa1071410 AT2G32700.2 24.453 274 180 13 159 426 534 786 4.59e-11 65.5
Msa1071410 AT2G32700.5 24.453 274 180 13 159 426 534 786 4.59e-11 65.5
Msa1071410 AT2G32700.1 24.453 274 180 13 159 426 534 786 4.59e-11 65.5
Msa1071410 AT2G32700.4 24.453 274 180 13 159 426 534 786 4.59e-11 65.5
Msa1071410 AT2G32700.3 24.453 274 180 13 159 426 534 786 4.59e-11 65.5
Msa1071410 AT2G32700.7 24.453 274 180 13 159 426 553 805 5.19e-11 65.5
Msa1071410 AT5G13480.2 26.383 235 149 10 182 409 137 354 6.96e-11 65.1
Msa1071410 AT5G13480.4 26.383 235 149 10 182 409 114 331 8.20e-11 64.7
Msa1071410 AT5G13480.3 26.383 235 149 10 182 409 114 331 8.23e-11 64.7

Find 153 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTCGCCTGGGCTTTA+TGG 0.172694 7_2:+67922184 None:intergenic
CAGACGAAACATTGAGGTTT+TGG 0.210103 7_2:-67920833 Msa1071410:CDS
AGATAGGAATTGTATGAATT+AGG 0.210843 7_2:+67923228 None:intergenic
TTTGAATGATGAGAGAAATA+AGG 0.244865 7_2:+67923188 None:intergenic
CTGGAAGGGGAGCACACTTC+TGG 0.268112 7_2:+67922344 None:intergenic
GATAGGAATTGTATGAATTA+GGG 0.295845 7_2:+67923229 None:intergenic
TTAAAACCCCAACAAATAAA+AGG 0.309977 7_2:-67920397 Msa1071410:three_prime_UTR
CTCTCTCTAACAATGGCTTC+AGG 0.319079 7_2:-67922976 Msa1071410:exon
CTATCTACGCGTTGCCTCAT+AGG 0.321314 7_2:+67920658 None:intergenic
ATGCGGCTCACATGTGAAAA+TGG 0.326418 7_2:+67920753 None:intergenic
GTTCTTGAAAGCTAGAATTC+TGG 0.331154 7_2:+67922274 None:intergenic
ATGATAATCTACTTTACATC+TGG 0.357040 7_2:-67921241 Msa1071410:CDS
GCGATCGAACAATCAAGTTT+TGG 0.357857 7_2:-67921088 Msa1071410:CDS
TAGCTTCCTGTACGCTTCTC+TGG 0.359002 7_2:+67922325 None:intergenic
AATGGCTCAGCTCTTGCTTT+CGG 0.359726 7_2:+67920771 None:intergenic
CCCTATCACATCTGTGAGTT+GGG 0.371621 7_2:-67921642 Msa1071410:CDS
CACTTCAAGAGTTCTTTATA+TGG 0.372662 7_2:-67920895 Msa1071410:CDS
TTGAATGATGAGAGAAATAA+GGG 0.380069 7_2:+67923189 None:intergenic
TCCATAGCAGGGAACATACT+TGG 0.385318 7_2:+67921021 None:intergenic
GTTGCCACTGTGCAACCATC+CGG 0.387110 7_2:+67920864 None:intergenic
AAATCCATCGCCGATCTATT+CGG 0.388532 7_2:+67922416 None:intergenic
GCTCCTGATGGGCGTCATAT+TGG 0.389395 7_2:-67921620 Msa1071410:CDS
CCTGAAGAGGAAAACGTGAT+TGG 0.389938 7_2:+67922926 None:intergenic
GGATACAGCTTCAGATAAAC+AGG 0.391975 7_2:-67921564 Msa1071410:intron
CAGAGTCTTTAAACATGAAC+AGG 0.397977 7_2:-67922298 Msa1071410:CDS
GAACTTTGAAAGGTGGTCAT+AGG 0.402652 7_2:-67921445 Msa1071410:CDS
ATTACCTCAATTTATTAGAC+TGG 0.406978 7_2:-67921769 Msa1071410:CDS
CTGAAGAGGAAAACGTGATT+GGG 0.412005 7_2:+67922927 None:intergenic
TCTGCCATCTTCACCATTGA+AGG 0.425176 7_2:+67920930 None:intergenic
AAGAAGTTTGCGGATTGAAA+TGG 0.432752 7_2:-67921298 Msa1071410:CDS
CCCAAGTATGTTCCCTGCTA+TGG 0.435862 7_2:-67921022 Msa1071410:CDS
TAGGCAGCGAGTAGGGTCTT+TGG 0.438523 7_2:-67921426 Msa1071410:CDS
TAATAGTCATCCACAAGGTC+TGG 0.439377 7_2:+67921788 None:intergenic
TTTCATTCTTGTTCCATAGC+AGG 0.442202 7_2:+67921009 None:intergenic
CACAGAATCAGCTAACACTT+TGG 0.446675 7_2:-67920959 Msa1071410:CDS
GCCCAACTCACAGATGTGAT+AGG 0.447194 7_2:+67921641 None:intergenic
GCCCTATCACATCTGTGAGT+TGG 0.447852 7_2:-67921643 Msa1071410:CDS
CAAGGGAATTTGCTAGCTAC+TGG 0.450097 7_2:-67921122 Msa1071410:CDS
CTTGCTTGGTGTCCATTCCA+AGG 0.450852 7_2:-67921140 Msa1071410:CDS
CTCTGTAAGTGTTCCTGAAG+AGG 0.453227 7_2:+67922913 None:intergenic
TGCTTGAACTCGGTTGACAC+TGG 0.455069 7_2:-67921047 Msa1071410:CDS
TCATGAGGAATCAAATCAAC+TGG 0.456090 7_2:+67922239 None:intergenic
TTGGAAACACAGTGTATTTG+TGG 0.457657 7_2:-67921718 Msa1071410:CDS
TCTTTATATGGCGCAGAGCC+CGG 0.458141 7_2:-67920883 Msa1071410:CDS
AGAGATTATATATAGCAGAT+AGG 0.460787 7_2:+67923212 None:intergenic
GTACTTTACAGTGGAGTAAA+GGG 0.462572 7_2:+67920680 None:intergenic
CTCCTACACAGTGGCTTCAC+AGG 0.468541 7_2:-67921193 Msa1071410:CDS
TGGTGTGTGACTACGTCCAC+GGG 0.468941 7_2:+67920558 None:intergenic
TCAGACTTCTGAGAGGACTT+TGG 0.470401 7_2:-67921816 Msa1071410:intron
TCCTGTACGCTTCTCTGGAA+GGG 0.470590 7_2:+67922330 None:intergenic
GATGGGCGTCATATTGGCAT+TGG 0.470950 7_2:-67921614 Msa1071410:CDS
GGTACTTTACAGTGGAGTAA+AGG 0.472946 7_2:+67920679 None:intergenic
CTAGCTACTGGTGGAGGCAG+TGG 0.480596 7_2:-67921110 Msa1071410:CDS
CCGTGACGAACCACGTATAT+CGG 0.480622 7_2:-67920534 Msa1071410:three_prime_UTR
TTCATTCTTGTTCCATAGCA+GGG 0.481145 7_2:+67921010 None:intergenic
ACAACTCTGAAGTGCAGCTA+TGG 0.484474 7_2:-67921586 Msa1071410:CDS
ATGCCAATATGACGCCCATC+AGG 0.488601 7_2:+67921617 None:intergenic
ACTTTGGAAATATCCTTCAA+TGG 0.495344 7_2:-67920943 Msa1071410:CDS
ATATCCTTCAATGGTGAAGA+TGG 0.498891 7_2:-67920934 Msa1071410:CDS
AACAACCACATACTCACAAC+CGG 0.499451 7_2:-67921398 Msa1071410:CDS
TGCTATGGAACAAGAATGAA+AGG 0.505330 7_2:-67921007 Msa1071410:CDS
TTCCTGTACGCTTCTCTGGA+AGG 0.508481 7_2:+67922329 None:intergenic
GTGGTGTGTGACTACGTCCA+CGG 0.509034 7_2:+67920557 None:intergenic
TTGCCACTGTGCAACCATCC+GGG 0.511124 7_2:+67920865 None:intergenic
CACCTGAGGAATAATTCGCC+TGG 0.512239 7_2:+67922175 None:intergenic
TTGCTTGGTGTCCATTCCAA+GGG 0.513094 7_2:-67921139 Msa1071410:CDS
TCTGTGAGTTGGGCTCCTGA+TGG 0.513830 7_2:-67921632 Msa1071410:CDS
CACCGGTGCATGCTTGAACT+CGG 0.514125 7_2:-67921057 Msa1071410:CDS
TTTCGATTATGCACACTACA+TGG 0.515001 7_2:-67922396 Msa1071410:CDS
CTGTGAGTTGGGCTCCTGAT+GGG 0.515660 7_2:-67921631 Msa1071410:CDS
CCCCTTCCAGAGAAGCGTAC+AGG 0.515877 7_2:-67922331 Msa1071410:CDS
CCGATATACGTGGTTCGTCA+CGG 0.520907 7_2:+67920534 None:intergenic
AGATCATACATCTGCAGTAA+AGG 0.521203 7_2:-67921165 Msa1071410:CDS
AGGGAGTTACTCAGCTCTCA+TGG 0.521335 7_2:-67920987 Msa1071410:CDS
CACACTACATGGTGACAGAA+GGG 0.522072 7_2:-67922385 Msa1071410:CDS
GGGCATGAACAAGAAGTTTG+CGG 0.522362 7_2:-67921308 Msa1071410:CDS
TAGATTATCATTCCCTCCAC+TGG 0.527433 7_2:+67921253 None:intergenic
CTGCAGTTGAGAACTTTGAA+AGG 0.529944 7_2:-67921455 Msa1071410:intron
TTACCTCAATTTATTAGACT+GGG 0.529967 7_2:-67921768 Msa1071410:CDS
AATGTTCTTGCAATAGCACT+TGG 0.530924 7_2:-67921737 Msa1071410:CDS
CCTGTACGCTTCTCTGGAAG+GGG 0.531549 7_2:+67922331 None:intergenic
ACCCCAACAAATAAAAGGAA+TGG 0.535284 7_2:-67920392 Msa1071410:three_prime_UTR
GCCCAGGCGAATTATTCCTC+AGG 0.535877 7_2:-67922177 Msa1071410:intron
ACCTGAGGAATAATTCGCCT+GGG 0.538294 7_2:+67922176 None:intergenic
GACAGAAGGGGCTAAAGGTA+AGG 0.539789 7_2:-67922372 Msa1071410:CDS
ATGGTGACAGAAGGGGCTAA+AGG 0.542605 7_2:-67922377 Msa1071410:CDS
GCTAGCAAATTCCCTTGGAA+TGG 0.543063 7_2:+67921128 None:intergenic
GCTTGAACTCGGTTGACACT+GGG 0.546774 7_2:-67921046 Msa1071410:CDS
TTTGGACGCTCCAGACCTTG+TGG 0.549436 7_2:-67921798 Msa1071410:CDS
CAACTCTGAAGTGCAGCTAT+GGG 0.552386 7_2:-67921585 Msa1071410:CDS
CTGCAGTAAAGGCTCTTGCT+TGG 0.552397 7_2:-67921154 Msa1071410:CDS
GTGGTCATAGGCAGCGAGTA+GGG 0.553407 7_2:-67921433 Msa1071410:CDS
GGAATCAAATCAACTGGAGT+AGG 0.555155 7_2:+67922245 None:intergenic
GTTCAAGCATGCACCGGTGT+GGG 0.559486 7_2:+67921061 None:intergenic
GTGAAGATGGCAGAGCTCAA+TGG 0.559588 7_2:-67920921 Msa1071410:CDS
TGATAATCTACTTTACATCT+GGG 0.563072 7_2:-67921240 Msa1071410:CDS
ATATTTGGGGACTGAATGAG+AGG 0.567505 7_2:+67920452 None:intergenic
CCCAACTCACAGATGTGATA+GGG 0.567907 7_2:+67921642 None:intergenic
GCACACTACATGGTGACAGA+AGG 0.570973 7_2:-67922386 Msa1071410:CDS
CTACTTTACATCTGGGACAG+AGG 0.574017 7_2:-67921233 Msa1071410:CDS
TTCCCCAGTCTAATAAATTG+AGG 0.574191 7_2:+67921765 None:intergenic
GGCAACGCGTAGATAGAAGA+TGG 0.575004 7_2:-67920651 Msa1071410:three_prime_UTR
CATACTCACAACCGGAGGGA+TGG 0.577159 7_2:-67921390 Msa1071410:CDS
GATGATGAAGTAAGCTCATG+AGG 0.578213 7_2:+67922224 None:intergenic
TCCCTCCGGTTGTGAGTATG+TGG 0.579028 7_2:+67921393 None:intergenic
TATATGGCGCAGAGCCCGGA+TGG 0.579495 7_2:-67920879 Msa1071410:CDS
CGATATACGTGGTTCGTCAC+GGG 0.579804 7_2:+67920535 None:intergenic
TCCACTGTAAAGTACCTATG+AGG 0.581940 7_2:-67920672 Msa1071410:three_prime_UTR
CAGATTTATACCGAATAGAT+CGG 0.585167 7_2:-67922426 Msa1071410:CDS
TATTTGTGGGATGCATCAAA+TGG 0.585182 7_2:-67921704 Msa1071410:CDS
CAGTAGCTAGCAAATTCCCT+TGG 0.590454 7_2:+67921123 None:intergenic
CTCACAACCGGAGGGATGGA+CGG 0.590810 7_2:-67921386 Msa1071410:CDS
AACCGAGTTCAAGCATGCAC+CGG 0.591621 7_2:+67921055 None:intergenic
TGGAAACACAGTGTATTTGT+GGG 0.594599 7_2:-67921717 Msa1071410:CDS
GGTGGTCATAGGCAGCGAGT+AGG 0.596714 7_2:-67921434 Msa1071410:CDS
AATTTGCTAGCTACTGGTGG+AGG 0.597622 7_2:-67921116 Msa1071410:CDS
CAGCAGCAGACGAAACATTG+AGG 0.598798 7_2:-67920839 Msa1071410:CDS
GGGAATTTGCTAGCTACTGG+TGG 0.599431 7_2:-67921119 Msa1071410:CDS
TATACCGAATAGATCGGCGA+TGG 0.599857 7_2:-67922420 Msa1071410:CDS
ATCAAATCAACTGGAGTAGG+TGG 0.601482 7_2:+67922248 None:intergenic
AGCGAGTAGGGTCTTTGGCA+TGG 0.601597 7_2:-67921421 Msa1071410:CDS
TAACACGTTACAATGTACAT+AGG 0.602945 7_2:+67920609 None:intergenic
GGATTGAAATGGTCGGCTAA+CGG 0.603805 7_2:-67921287 Msa1071410:CDS
AGTTCAAGCATGCACCGGTG+TGG 0.604168 7_2:+67921060 None:intergenic
ATGTTACTGCTTAGCGAATG+CGG 0.605647 7_2:+67920736 None:intergenic
GTAAAGGGCAGAAAATAACT+TGG 0.606742 7_2:+67920695 None:intergenic
AAGATAAAACCATAAAGCCC+AGG 0.612129 7_2:-67922193 Msa1071410:CDS
CCATAGCAGGGAACATACTT+GGG 0.613427 7_2:+67921022 None:intergenic
AGGGCCGTCTTCTTCTTCGA+CGG 0.614774 7_2:+67921661 None:intergenic
AAGTGCTATTGCAAGAACAT+TGG 0.617527 7_2:+67921739 None:intergenic
CAGTTGAGAACTTTGAAAGG+TGG 0.617886 7_2:-67921452 Msa1071410:CDS
GTCAACAATTAGCCAGTGGA+GGG 0.619435 7_2:-67921265 Msa1071410:CDS
GGTCAACAATTAGCCAGTGG+AGG 0.633558 7_2:-67921266 Msa1071410:CDS
TACCTCAATTTATTAGACTG+GGG 0.642053 7_2:-67921767 Msa1071410:CDS
GCTATGGAACAAGAATGAAA+GGG 0.642631 7_2:-67921006 Msa1071410:CDS
ACCACATACTCACAACCGGA+GGG 0.650856 7_2:-67921394 Msa1071410:CDS
GCCTCATAGGTACTTTACAG+TGG 0.657693 7_2:+67920671 None:intergenic
TATACGTGGTTCGTCACGGG+TGG 0.660616 7_2:+67920538 None:intergenic
ACAACACATGATTTGCCCCG+TGG 0.662203 7_2:-67920574 Msa1071410:three_prime_UTR
AGCCTGTGAAGCCACTGTGT+AGG 0.662766 7_2:+67921191 None:intergenic
ACACTACATGGTGACAGAAG+GGG 0.666148 7_2:-67922384 Msa1071410:CDS
AACGGTCAACAATTAGCCAG+TGG 0.669539 7_2:-67921269 Msa1071410:CDS
CTTACAGAGAAAGAGTTCCA+AGG 0.680127 7_2:-67922899 Msa1071410:CDS
GTTACCGTCGAAGAAGAAGA+CGG 0.688864 7_2:-67921665 Msa1071410:CDS
ACATTGTTGAAACATACAGA+GGG 0.688874 7_2:-67921328 Msa1071410:CDS
AACCACATACTCACAACCGG+AGG 0.695066 7_2:-67921395 Msa1071410:CDS
CACATTGTTGAAACATACAG+AGG 0.702329 7_2:-67921329 Msa1071410:CDS
AGTTTGCGGATTGAAATGGT+CGG 0.710202 7_2:-67921294 Msa1071410:CDS
TGAGGTAATAGTCATCCACA+AGG 0.712406 7_2:+67921783 None:intergenic
AGAACAAAGACCGATATACG+TGG 0.737164 7_2:+67920524 None:intergenic
GGTGTGTGACTACGTCCACG+GGG 0.745352 7_2:+67920559 None:intergenic
CTTCTAGTTCTCCTACACAG+TGG 0.755247 7_2:-67921202 Msa1071410:CDS
GAGCCCGGATGGTTGCACAG+TGG 0.763260 7_2:-67920868 Msa1071410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAATAAATTTTGAAATTT+TGG - chr7_2:67920865-67920884 Msa1071410:CDS 10.0%
!!! AGAATAAATTTTGAAATTTT+GGG - chr7_2:67920866-67920885 Msa1071410:CDS 10.0%
!!! TTGTGAATAAATTTTAAAAT+TGG - chr7_2:67920901-67920920 Msa1071410:CDS 10.0%
!!! TGTGAATAAATTTTAAAATT+GGG - chr7_2:67920902-67920921 Msa1071410:CDS 10.0%
!! TTTATTAATTCTTAGTTAAA+AGG - chr7_2:67921582-67921601 Msa1071410:CDS 10.0%
!! TTATTAATTCTTAGTTAAAA+GGG - chr7_2:67921583-67921602 Msa1071410:CDS 10.0%
!!! TGATATGTTTTTATATATTT+GGG + chr7_2:67923179-67923198 None:intergenic 10.0%
!!! GGATTTTAATTATCAAATTT+TGG - chr7_2:67920800-67920819 Msa1071410:CDS 15.0%
!!! GAATAAATTTTGAAATTTTG+GGG - chr7_2:67920867-67920886 Msa1071410:CDS 15.0%
!!! AATAAATTTTGAAATTTTGG+GGG - chr7_2:67920868-67920887 Msa1071410:CDS 15.0%
!! AATAACAATGATAAAACATA+AGG + chr7_2:67921489-67921508 None:intergenic 15.0%
!!! ATGTTTTATCATTGTTATTT+TGG - chr7_2:67921490-67921509 Msa1071410:intron 15.0%
!! ACTCATTCAAAATTTAAATT+TGG + chr7_2:67921535-67921554 None:intergenic 15.0%
!!! GATATGTTTTTATATATTTG+GGG + chr7_2:67923178-67923197 None:intergenic 15.0%
!!! CTGATATGTTTTTATATATT+TGG + chr7_2:67923180-67923199 None:intergenic 15.0%
!! TATTCAGATCTTTCAAAATT+AGG - chr7_2:67920761-67920780 Msa1071410:CDS 20.0%
!! ATTCAGATCTTTCAAAATTA+GGG - chr7_2:67920762-67920781 Msa1071410:CDS 20.0%
!!! ATTAGGGTTTTAATGTAAAT+TGG - chr7_2:67920778-67920797 Msa1071410:CDS 20.0%
!!! TTAGGGTTTTAATGTAAATT+GGG - chr7_2:67920779-67920798 Msa1071410:CDS 20.0%
!!! ATTATCAAATTTTGGTGTTT+TGG - chr7_2:67920808-67920827 Msa1071410:CDS 20.0%
!!! GGATTTTTAATTTTCGAATT+GGG - chr7_2:67920923-67920942 Msa1071410:CDS 20.0%
!!! GATTTTTAATTTTCGAATTG+GGG - chr7_2:67920924-67920943 Msa1071410:CDS 20.0%
!!! ATTTTTAATTTTCGAATTGG+GGG - chr7_2:67920925-67920944 Msa1071410:CDS 20.0%
!! CACAAAATTGCAAAATATTA+TGG + chr7_2:67921755-67921774 None:intergenic 20.0%
! AGAGATTATATATAGCAGAT+AGG + chr7_2:67920405-67920424 None:intergenic 25.0%
! TTGAATGATGAGAGAAATAA+GGG + chr7_2:67920428-67920447 None:intergenic 25.0%
! TTTGAATGATGAGAGAAATA+AGG + chr7_2:67920429-67920448 None:intergenic 25.0%
!! TCTAATTCATTTCTTTTGCA+GGG - chr7_2:67920535-67920554 Msa1071410:three_prime_UTR 25.0%
!! AAATGTTCTTACATTTTCCT+TGG + chr7_2:67920735-67920754 None:intergenic 25.0%
! TTAGACTACTAATCCAATTA+TGG + chr7_2:67920834-67920853 None:intergenic 25.0%
!!! GGGATTTTTAATTTTCGAAT+TGG - chr7_2:67920922-67920941 Msa1071410:CDS 25.0%
! AACTCAGTCAATAAAAAGTT+TGG + chr7_2:67921073-67921092 None:intergenic 25.0%
!!! TCATTGTTATTTTGGTTCTT+TGG - chr7_2:67921498-67921517 Msa1071410:intron 25.0%
!!! AATGAGTTTTGAAAATCAAG+TGG - chr7_2:67921548-67921567 Msa1071410:intron 25.0%
!!! ATGAGTTTTGAAAATCAAGT+GGG - chr7_2:67921549-67921568 Msa1071410:intron 25.0%
!!! TTAGGTTTTTGAAATTCAAG+TGG - chr7_2:67921673-67921692 Msa1071410:CDS 25.0%
! ATTACCTCAATTTATTAGAC+TGG - chr7_2:67921845-67921864 Msa1071410:intron 25.0%
! TTACCTCAATTTATTAGACT+GGG - chr7_2:67921846-67921865 Msa1071410:intron 25.0%
!! TAGTTCATAAAGGTGTATTA+AGG + chr7_2:67922097-67922116 None:intergenic 25.0%
!! AGGAATTTGATAGTTCATAA+AGG + chr7_2:67922107-67922126 None:intergenic 25.0%
! AAACCAAACAAGAATAATGT+TGG + chr7_2:67922139-67922158 None:intergenic 25.0%
! ATGATAATCTACTTTACATC+TGG - chr7_2:67922373-67922392 Msa1071410:CDS 25.0%
! TGATAATCTACTTTACATCT+GGG - chr7_2:67922374-67922393 Msa1071410:CDS 25.0%
! TTAAAACCCCAACAAATAAA+AGG - chr7_2:67923217-67923236 Msa1071410:five_prime_UTR 25.0%
!!! TTCCATTCCTTTTATTTGTT+GGG + chr7_2:67923227-67923246 None:intergenic 25.0%
!!! ATTCCATTCCTTTTATTTGT+TGG + chr7_2:67923228-67923247 None:intergenic 25.0%
! GTCTAATTCATTTCTTTTGC+AGG - chr7_2:67920534-67920553 Msa1071410:three_prime_UTR 30.0%
! TTCTTTTCTCTCTCTAACAA+TGG - chr7_2:67920631-67920650 Msa1071410:three_prime_UTR 30.0%
CAGATTTATACCGAATAGAT+CGG - chr7_2:67921188-67921207 Msa1071410:CDS 30.0%
CTTAGTTAAAAGGGTTTGTA+TGG - chr7_2:67921592-67921611 Msa1071410:CDS 30.0%
!! TCTTAGTTGAAAGTGTTGTA+TGG - chr7_2:67921716-67921735 Msa1071410:CDS 30.0%
TACCTCAATTTATTAGACTG+GGG - chr7_2:67921847-67921866 Msa1071410:intron 30.0%
TTGCCAACATTATTCTTGTT+TGG - chr7_2:67922133-67922152 Msa1071410:intron 30.0%
ACATTGTTGAAACATACAGA+GGG - chr7_2:67922286-67922305 Msa1071410:CDS 30.0%
! ACTTTGGAAATATCCTTCAA+TGG - chr7_2:67922671-67922690 Msa1071410:intron 30.0%
CACTTCAAGAGTTCTTTATA+TGG - chr7_2:67922719-67922738 Msa1071410:intron 30.0%
TAACACGTTACAATGTACAT+AGG + chr7_2:67923008-67923027 None:intergenic 30.0%
!!! TTTTAAAGTGAGCAAGCAAA+GGG + chr7_2:67923121-67923140 None:intergenic 30.0%
!!! TTTTTAAAGTGAGCAAGCAA+AGG + chr7_2:67923122-67923141 None:intergenic 30.0%
! GCTTGCTCACTTTAAAAATA+TGG - chr7_2:67923124-67923143 Msa1071410:five_prime_UTR 30.0%
!! TCCATTCCTTTTATTTGTTG+GGG + chr7_2:67923226-67923245 None:intergenic 30.0%
!! AAAACGTGATTGGGTTTTGA+TGG + chr7_2:67920681-67920700 None:intergenic 35.0%
!!! TTTGGTGTTTTGGCCATAAT+TGG - chr7_2:67920818-67920837 Msa1071410:CDS 35.0%
!! TTGATTTGTTTGTTGCCAGT+TGG - chr7_2:67921164-67921183 Msa1071410:CDS 35.0%
TTTCGATTATGCACACTACA+TGG - chr7_2:67921218-67921237 Msa1071410:CDS 35.0%
CAGAGTCTTTAAACATGAAC+AGG - chr7_2:67921316-67921335 Msa1071410:CDS 35.0%
GTTCTTGAAAGCTAGAATTC+TGG + chr7_2:67921343-67921362 None:intergenic 35.0%
TCATGAGGAATCAAATCAAC+TGG + chr7_2:67921378-67921397 None:intergenic 35.0%
AAGATAAAACCATAAAGCCC+AGG - chr7_2:67921421-67921440 Msa1071410:CDS 35.0%
!! TGTGCTAGTTGATGATTAGT+TGG - chr7_2:67921642-67921661 Msa1071410:CDS 35.0%
! GATTAGTTGGCTATCTGATT+AGG - chr7_2:67921655-67921674 Msa1071410:CDS 35.0%
!! TTGTTTTTCAGACTTCTGAG+AGG - chr7_2:67921791-67921810 Msa1071410:CDS 35.0%
TTCCCCAGTCTAATAAATTG+AGG + chr7_2:67921852-67921871 None:intergenic 35.0%
! AAGTGCTATTGCAAGAACAT+TGG + chr7_2:67921878-67921897 None:intergenic 35.0%
AATGTTCTTGCAATAGCACT+TGG - chr7_2:67921877-67921896 Msa1071410:intron 35.0%
TTGGAAACACAGTGTATTTG+TGG - chr7_2:67921896-67921915 Msa1071410:intron 35.0%
TGGAAACACAGTGTATTTGT+GGG - chr7_2:67921897-67921916 Msa1071410:intron 35.0%
TATTTGTGGGATGCATCAAA+TGG - chr7_2:67921910-67921929 Msa1071410:intron 35.0%
! AACAGGTTTTTACACTTACC+TGG - chr7_2:67922067-67922086 Msa1071410:intron 35.0%
AAGGTGTATTAAGGTTAACC+AGG + chr7_2:67922088-67922107 None:intergenic 35.0%
AATAATGTTGGCAAACTAGC+AGG + chr7_2:67922127-67922146 None:intergenic 35.0%
CACATTGTTGAAACATACAG+AGG - chr7_2:67922285-67922304 Msa1071410:CDS 35.0%
! AAGAAGTTTGCGGATTGAAA+TGG - chr7_2:67922316-67922335 Msa1071410:CDS 35.0%
AGATCATACATCTGCAGTAA+AGG - chr7_2:67922449-67922468 Msa1071410:intron 35.0%
TTCATTCTTGTTCCATAGCA+GGG + chr7_2:67922607-67922626 None:intergenic 35.0%
TTTCATTCTTGTTCCATAGC+AGG + chr7_2:67922608-67922627 None:intergenic 35.0%
TGCTATGGAACAAGAATGAA+AGG - chr7_2:67922607-67922626 Msa1071410:intron 35.0%
GCTATGGAACAAGAATGAAA+GGG - chr7_2:67922608-67922627 Msa1071410:intron 35.0%
ATATCCTTCAATGGTGAAGA+TGG - chr7_2:67922680-67922699 Msa1071410:intron 35.0%
!!! TTGAGGTTTTGGAATGCTTT+TGG - chr7_2:67922792-67922811 Msa1071410:intron 35.0%
GTAAAGGGCAGAAAATAACT+TGG + chr7_2:67922922-67922941 None:intergenic 35.0%
GTACTTTACAGTGGAGTAAA+GGG + chr7_2:67922937-67922956 None:intergenic 35.0%
ACCCCAACAAATAAAAGGAA+TGG - chr7_2:67923222-67923241 Msa1071410:five_prime_UTR 35.0%
CTGAAGAGGAAAACGTGATT+GGG + chr7_2:67920690-67920709 None:intergenic 40.0%
CTTACAGAGAAAGAGTTCCA+AGG - chr7_2:67920715-67920734 Msa1071410:three_prime_UTR 40.0%
! TTGGGGGTTTTCTTAGATTG+TGG - chr7_2:67920884-67920903 Msa1071410:CDS 40.0%
TCGGTATAAATCTGTCCAAC+TGG + chr7_2:67921182-67921201 None:intergenic 40.0%
AAATCCATCGCCGATCTATT+CGG + chr7_2:67921201-67921220 None:intergenic 40.0%
ATCAAATCAACTGGAGTAGG+TGG + chr7_2:67921369-67921388 None:intergenic 40.0%
GGAATCAAATCAACTGGAGT+AGG + chr7_2:67921372-67921391 None:intergenic 40.0%
GATGATGAAGTAAGCTCATG+AGG + chr7_2:67921393-67921412 None:intergenic 40.0%
AATAATTCGCCTGGGCTTTA+TGG + chr7_2:67921433-67921452 None:intergenic 40.0%
AGATTTCAGTAAGACACCTG+AGG + chr7_2:67921456-67921475 None:intergenic 40.0%
TAATAGTCATCCACAAGGTC+TGG + chr7_2:67921829-67921848 None:intergenic 40.0%
TGAGGTAATAGTCATCCACA+AGG + chr7_2:67921834-67921853 None:intergenic 40.0%
GGATACAGCTTCAGATAAAC+AGG - chr7_2:67922050-67922069 Msa1071410:intron 40.0%
CTGCAGTTGAGAACTTTGAA+AGG - chr7_2:67922159-67922178 Msa1071410:intron 40.0%
! CAGTTGAGAACTTTGAAAGG+TGG - chr7_2:67922162-67922181 Msa1071410:intron 40.0%
! GAACTTTGAAAGGTGGTCAT+AGG - chr7_2:67922169-67922188 Msa1071410:intron 40.0%
AACAACCACATACTCACAAC+CGG - chr7_2:67922216-67922235 Msa1071410:CDS 40.0%
! AGTTTGCGGATTGAAATGGT+CGG - chr7_2:67922320-67922339 Msa1071410:CDS 40.0%
TAGATTATCATTCCCTCCAC+TGG + chr7_2:67922364-67922383 None:intergenic 40.0%
! GCGATCGAACAATCAAGTTT+TGG - chr7_2:67922526-67922545 Msa1071410:intron 40.0%
!!! AAGTTTTGGAATACCCACAC+CGG - chr7_2:67922540-67922559 Msa1071410:intron 40.0%
CACAGAATCAGCTAACACTT+TGG - chr7_2:67922655-67922674 Msa1071410:intron 40.0%
! CAGACGAAACATTGAGGTTT+TGG - chr7_2:67922781-67922800 Msa1071410:intron 40.0%
ATGTTACTGCTTAGCGAATG+CGG + chr7_2:67922881-67922900 None:intergenic 40.0%
GGTACTTTACAGTGGAGTAA+AGG + chr7_2:67922938-67922957 None:intergenic 40.0%
! TCCACTGTAAAGTACCTATG+AGG - chr7_2:67922942-67922961 Msa1071410:CDS 40.0%
AGAACAAAGACCGATATACG+TGG + chr7_2:67923093-67923112 None:intergenic 40.0%
ATATTTGGGGACTGAATGAG+AGG + chr7_2:67923165-67923184 None:intergenic 40.0%
CTCTCTCTAACAATGGCTTC+AGG - chr7_2:67920638-67920657 Msa1071410:three_prime_UTR 45.0%
!! ACGTGATTGGGTTTTGATGG+CGG + chr7_2:67920678-67920697 None:intergenic 45.0%
CCTGAAGAGGAAAACGTGAT+TGG + chr7_2:67920691-67920710 None:intergenic 45.0%
! CCAATCACGTTTTCCTCTTC+AGG - chr7_2:67920688-67920707 Msa1071410:three_prime_UTR 45.0%
CTCTGTAAGTGTTCCTGAAG+AGG + chr7_2:67920704-67920723 None:intergenic 45.0%
TATACCGAATAGATCGGCGA+TGG - chr7_2:67921194-67921213 Msa1071410:CDS 45.0%
CACACTACATGGTGACAGAA+GGG - chr7_2:67921229-67921248 Msa1071410:CDS 45.0%
ACACTACATGGTGACAGAAG+GGG - chr7_2:67921230-67921249 Msa1071410:CDS 45.0%
ACCTGAGGAATAATTCGCCT+GGG + chr7_2:67921441-67921460 None:intergenic 45.0%
! TCAGACTTCTGAGAGGACTT+TGG - chr7_2:67921798-67921817 Msa1071410:CDS 45.0%
GTTACCGTCGAAGAAGAAGA+CGG - chr7_2:67921949-67921968 Msa1071410:intron 45.0%
CCCAACTCACAGATGTGATA+GGG + chr7_2:67921975-67921994 None:intergenic 45.0%
CCCTATCACATCTGTGAGTT+GGG - chr7_2:67921972-67921991 Msa1071410:intron 45.0%
!! ACAACTCTGAAGTGCAGCTA+TGG - chr7_2:67922028-67922047 Msa1071410:intron 45.0%
!! CAACTCTGAAGTGCAGCTAT+GGG - chr7_2:67922029-67922048 Msa1071410:intron 45.0%
! AATTTTACCGTCCATCCCTC+CGG + chr7_2:67922238-67922257 None:intergenic 45.0%
GGGCATGAACAAGAAGTTTG+CGG - chr7_2:67922306-67922325 Msa1071410:CDS 45.0%
GGATTGAAATGGTCGGCTAA+CGG - chr7_2:67922327-67922346 Msa1071410:CDS 45.0%
AACGGTCAACAATTAGCCAG+TGG - chr7_2:67922345-67922364 Msa1071410:CDS 45.0%
GTCAACAATTAGCCAGTGGA+GGG - chr7_2:67922349-67922368 Msa1071410:CDS 45.0%
! CTACTTTACATCTGGGACAG+AGG - chr7_2:67922381-67922400 Msa1071410:CDS 45.0%
!! CTTCTAGTTCTCCTACACAG+TGG - chr7_2:67922412-67922431 Msa1071410:CDS 45.0%
!! TTGCTTGGTGTCCATTCCAA+GGG - chr7_2:67922475-67922494 Msa1071410:intron 45.0%
GCTAGCAAATTCCCTTGGAA+TGG + chr7_2:67922489-67922508 None:intergenic 45.0%
CAGTAGCTAGCAAATTCCCT+TGG + chr7_2:67922494-67922513 None:intergenic 45.0%
!! CAAGGGAATTTGCTAGCTAC+TGG - chr7_2:67922492-67922511 Msa1071410:intron 45.0%
!! AATTTGCTAGCTACTGGTGG+AGG - chr7_2:67922498-67922517 Msa1071410:intron 45.0%
CCATAGCAGGGAACATACTT+GGG + chr7_2:67922595-67922614 None:intergenic 45.0%
TCCATAGCAGGGAACATACT+TGG + chr7_2:67922596-67922615 None:intergenic 45.0%
TCTGCCATCTTCACCATTGA+AGG + chr7_2:67922687-67922706 None:intergenic 45.0%
! GCAGCTTTTGCTACTACTTC+TGG + chr7_2:67922822-67922841 None:intergenic 45.0%
AATGGCTCAGCTCTTGCTTT+CGG + chr7_2:67922846-67922865 None:intergenic 45.0%
ATGCGGCTCACATGTGAAAA+TGG + chr7_2:67922864-67922883 None:intergenic 45.0%
GCCTCATAGGTACTTTACAG+TGG + chr7_2:67922946-67922965 None:intergenic 45.0%
!! CGTGATTGGGTTTTGATGGC+GGG + chr7_2:67920677-67920696 None:intergenic 50.0%
GCACACTACATGGTGACAGA+AGG - chr7_2:67921228-67921247 Msa1071410:CDS 50.0%
ATGGTGACAGAAGGGGCTAA+AGG - chr7_2:67921237-67921256 Msa1071410:CDS 50.0%
GACAGAAGGGGCTAAAGGTA+AGG - chr7_2:67921242-67921261 Msa1071410:CDS 50.0%
! TCCTGTACGCTTCTCTGGAA+GGG + chr7_2:67921287-67921306 None:intergenic 50.0%
TTCCTGTACGCTTCTCTGGA+AGG + chr7_2:67921288-67921307 None:intergenic 50.0%
TAGCTTCCTGTACGCTTCTC+TGG + chr7_2:67921292-67921311 None:intergenic 50.0%
CACCTGAGGAATAATTCGCC+TGG + chr7_2:67921442-67921461 None:intergenic 50.0%
GCCCTATCACATCTGTGAGT+TGG - chr7_2:67921971-67921990 Msa1071410:intron 50.0%
GCCCAACTCACAGATGTGAT+AGG + chr7_2:67921976-67921995 None:intergenic 50.0%
ATGCCAATATGACGCCCATC+AGG + chr7_2:67922000-67922019 None:intergenic 50.0%
GATGGGCGTCATATTGGCAT+TGG - chr7_2:67922000-67922019 Msa1071410:intron 50.0%
AACCACATACTCACAACCGG+AGG - chr7_2:67922219-67922238 Msa1071410:CDS 50.0%
ACCACATACTCACAACCGGA+GGG - chr7_2:67922220-67922239 Msa1071410:CDS 50.0%
GGTCAACAATTAGCCAGTGG+AGG - chr7_2:67922348-67922367 Msa1071410:CDS 50.0%
CTGCAGTAAAGGCTCTTGCT+TGG - chr7_2:67922460-67922479 Msa1071410:intron 50.0%
!! CTTGCTTGGTGTCCATTCCA+AGG - chr7_2:67922474-67922493 Msa1071410:intron 50.0%
!! GGGAATTTGCTAGCTACTGG+TGG - chr7_2:67922495-67922514 Msa1071410:intron 50.0%
AACCGAGTTCAAGCATGCAC+CGG + chr7_2:67922562-67922581 None:intergenic 50.0%
TGCTTGAACTCGGTTGACAC+TGG - chr7_2:67922567-67922586 Msa1071410:intron 50.0%
GCTTGAACTCGGTTGACACT+GGG - chr7_2:67922568-67922587 Msa1071410:intron 50.0%
CCCAAGTATGTTCCCTGCTA+TGG - chr7_2:67922592-67922611 Msa1071410:intron 50.0%
AGGGAGTTACTCAGCTCTCA+TGG - chr7_2:67922627-67922646 Msa1071410:intron 50.0%
GTGAAGATGGCAGAGCTCAA+TGG - chr7_2:67922693-67922712 Msa1071410:intron 50.0%
TCTTTATATGGCGCAGAGCC+CGG - chr7_2:67922731-67922750 Msa1071410:intron 50.0%
CAGCAGCAGACGAAACATTG+AGG - chr7_2:67922775-67922794 Msa1071410:intron 50.0%
CTATCTACGCGTTGCCTCAT+AGG + chr7_2:67922959-67922978 None:intergenic 50.0%
GGCAACGCGTAGATAGAAGA+TGG - chr7_2:67922963-67922982 Msa1071410:CDS 50.0%
! ACAACACATGATTTGCCCCG+TGG - chr7_2:67923040-67923059 Msa1071410:five_prime_UTR 50.0%
CGATATACGTGGTTCGTCAC+GGG + chr7_2:67923082-67923101 None:intergenic 50.0%
CCGATATACGTGGTTCGTCA+CGG + chr7_2:67923083-67923102 None:intergenic 50.0%
CCGTGACGAACCACGTATAT+CGG - chr7_2:67923080-67923099 Msa1071410:five_prime_UTR 50.0%
! CCTGTACGCTTCTCTGGAAG+GGG + chr7_2:67921286-67921305 None:intergenic 55.0%
GCCCAGGCGAATTATTCCTC+AGG - chr7_2:67921437-67921456 Msa1071410:CDS 55.0%
TTTGGACGCTCCAGACCTTG+TGG - chr7_2:67921816-67921835 Msa1071410:intron 55.0%
AGGGCCGTCTTCTTCTTCGA+CGG + chr7_2:67921956-67921975 None:intergenic 55.0%
! TCTGTGAGTTGGGCTCCTGA+TGG - chr7_2:67921982-67922001 Msa1071410:intron 55.0%
! CTGTGAGTTGGGCTCCTGAT+GGG - chr7_2:67921983-67922002 Msa1071410:intron 55.0%
! GCTCCTGATGGGCGTCATAT+TGG - chr7_2:67921994-67922013 Msa1071410:intron 55.0%
GTGGTCATAGGCAGCGAGTA+GGG - chr7_2:67922181-67922200 Msa1071410:CDS 55.0%
TAGGCAGCGAGTAGGGTCTT+TGG - chr7_2:67922188-67922207 Msa1071410:CDS 55.0%
AGCGAGTAGGGTCTTTGGCA+TGG - chr7_2:67922193-67922212 Msa1071410:CDS 55.0%
TCCCTCCGGTTGTGAGTATG+TGG + chr7_2:67922224-67922243 None:intergenic 55.0%
CATACTCACAACCGGAGGGA+TGG - chr7_2:67922224-67922243 Msa1071410:CDS 55.0%
CTCCTACACAGTGGCTTCAC+AGG - chr7_2:67922421-67922440 Msa1071410:CDS 55.0%
AGCCTGTGAAGCCACTGTGT+AGG + chr7_2:67922426-67922445 None:intergenic 55.0%
! GTTCAAGCATGCACCGGTGT+GGG + chr7_2:67922556-67922575 None:intergenic 55.0%
! AGTTCAAGCATGCACCGGTG+TGG + chr7_2:67922557-67922576 None:intergenic 55.0%
CACCGGTGCATGCTTGAACT+CGG - chr7_2:67922557-67922576 Msa1071410:intron 55.0%
TTGCCACTGTGCAACCATCC+GGG + chr7_2:67922752-67922771 None:intergenic 55.0%
GTTGCCACTGTGCAACCATC+CGG + chr7_2:67922753-67922772 None:intergenic 55.0%
TGGTGTGTGACTACGTCCAC+GGG + chr7_2:67923059-67923078 None:intergenic 55.0%
GTGGTGTGTGACTACGTCCA+CGG + chr7_2:67923060-67923079 None:intergenic 55.0%
TATACGTGGTTCGTCACGGG+TGG + chr7_2:67923079-67923098 None:intergenic 55.0%
! CTGGAAGGGGAGCACACTTC+TGG + chr7_2:67921273-67921292 None:intergenic 60.0%
! CCCCTTCCAGAGAAGCGTAC+AGG - chr7_2:67921283-67921302 Msa1071410:CDS 60.0%
GGTGGTCATAGGCAGCGAGT+AGG - chr7_2:67922180-67922199 Msa1071410:CDS 60.0%
CTCACAACCGGAGGGATGGA+CGG - chr7_2:67922228-67922247 Msa1071410:CDS 60.0%
CTAGCTACTGGTGGAGGCAG+TGG - chr7_2:67922504-67922523 Msa1071410:intron 60.0%
TATATGGCGCAGAGCCCGGA+TGG - chr7_2:67922735-67922754 Msa1071410:intron 60.0%
GGTGTGTGACTACGTCCACG+GGG + chr7_2:67923058-67923077 None:intergenic 60.0%
GAGCCCGGATGGTTGCACAG+TGG - chr7_2:67922746-67922765 Msa1071410:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 67920387 67923249 67920387 ID=Msa1071410;Name=Msa1071410
chr7_2 mRNA 67920387 67923249 67920387 ID=Msa1071410-mRNA-1;Parent=Msa1071410;Name=Msa1071410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=263|1|1|1|1|1|4|359|454
chr7_2 exon 67920387 67921471 67920387 ID=Msa1071410-mRNA-1:exon:14797;Parent=Msa1071410-mRNA-1
chr7_2 exon 67921565 67921834 67921565 ID=Msa1071410-mRNA-1:exon:14796;Parent=Msa1071410-mRNA-1
chr7_2 exon 67922178 67922453 67922178 ID=Msa1071410-mRNA-1:exon:14795;Parent=Msa1071410-mRNA-1
chr7_2 exon 67922894 67923249 67922894 ID=Msa1071410-mRNA-1:exon:14794;Parent=Msa1071410-mRNA-1
chr7_2 five_prime_UTR 67922987 67923249 67922987 ID=Msa1071410-mRNA-1:five_prime_utr;Parent=Msa1071410-mRNA-1
chr7_2 CDS 67922894 67922986 67922894 ID=Msa1071410-mRNA-1:cds;Parent=Msa1071410-mRNA-1
chr7_2 CDS 67922178 67922453 67922178 ID=Msa1071410-mRNA-1:cds;Parent=Msa1071410-mRNA-1
chr7_2 CDS 67921565 67921834 67921565 ID=Msa1071410-mRNA-1:cds;Parent=Msa1071410-mRNA-1
chr7_2 CDS 67920746 67921471 67920746 ID=Msa1071410-mRNA-1:cds;Parent=Msa1071410-mRNA-1
chr7_2 three_prime_UTR 67920387 67920745 67920387 ID=Msa1071410-mRNA-1:three_prime_utr;Parent=Msa1071410-mRNA-1
Gene Sequence

>Msa1071410

ATGGCTTCAGGTTCTTTGAGTTCTCCCGCCATCAAAACCCAATCACGTTTTCCTCTTCAGGAACACTTACAGAGAAAGAGTTCCAAGGAAAATTTGGACAGATTTATACCGAATAGATCGGCGATGGATTTCGATTATGCACACTACATGGTGACAGAAGGGGCTAAAGGTAAGGAAAATCCAGAAGTGTGCTCCCCTTCCAGAGAAGCGTACAGGAAGCTACTTGCAGAGTCTTTAAACATGAACAGGACCAGAATTCTAGCTTTCAAGAACAAGCCACCTACTCCAGTTGATTTGATTCCTCATGAGCTTACTTCATCATCTCTTCAACAAGATAAAACCATAAAGCCCAGGCGAATTATTCCTCAGACTTCTGAGAGGACTTTGGACGCTCCAGACCTTGTGGATGACTATTACCTCAATTTATTAGACTGGGGAAGCGCCAATGTTCTTGCAATAGCACTTGGAAACACAGTGTATTTGTGGGATGCATCAAATGGTTCTACTTCAGAACTTGTTACCGTCGAAGAAGAAGACGGCCCTATCACATCTGTGAGTTGGGCTCCTGATGGGCGTCATATTGGCATTGGTTTGAACAACTCTGAAGTGCAGCTATGGGATACAGCTTCAGATAAACAGTTGAGAACTTTGAAAGGTGGTCATAGGCAGCGAGTAGGGTCTTTGGCATGGAACAACCACATACTCACAACCGGAGGGATGGACGGTAAAATTATCAATAATGATGTAAGAATTAGAGCACACATTGTTGAAACATACAGAGGGCATGAACAAGAAGTTTGCGGATTGAAATGGTCGGCTAACGGTCAACAATTAGCCAGTGGAGGGAATGATAATCTACTTTACATCTGGGACAGAGGTACATCAACTTCTAGTTCTCCTACACAGTGGCTTCACAGGCTTGAAGATCATACATCTGCAGTAAAGGCTCTTGCTTGGTGTCCATTCCAAGGGAATTTGCTAGCTACTGGTGGAGGCAGTGGCGATCGAACAATCAAGTTTTGGAATACCCACACCGGTGCATGCTTGAACTCGGTTGACACTGGGTCCCAAGTATGTTCCCTGCTATGGAACAAGAATGAAAGGGAGTTACTCAGCTCTCATGGTTTTACACAGAATCAGCTAACACTTTGGAAATATCCTTCAATGGTGAAGATGGCAGAGCTCAATGGTCACACTTCAAGAGTTCTTTATATGGCGCAGAGCCCGGATGGTTGCACAGTGGCAACAGCAGCAGCAGACGAAACATTGAGGTTTTGGAATGCTTTTGGCACTCCAGAAGTAGTAGCAAAAGCTGCACCGAAAGCAAGAGCTGAGCCATTTTCACATGTGAGCCGCATTCGCTAA

Protein sequence

>Msa1071410

MASGSLSSPAIKTQSRFPLQEHLQRKSSKENLDRFIPNRSAMDFDYAHYMVTEGAKGKENPEVCSPSREAYRKLLAESLNMNRTRILAFKNKPPTPVDLIPHELTSSSLQQDKTIKPRRIIPQTSERTLDAPDLVDDYYLNLLDWGSANVLAIALGNTVYLWDASNGSTSELVTVEEEDGPITSVSWAPDGRHIGIGLNNSEVQLWDTASDKQLRTLKGGHRQRVGSLAWNNHILTTGGMDGKIINNDVRIRAHIVETYRGHEQEVCGLKWSANGQQLASGGNDNLLYIWDRGTSTSSSPTQWLHRLEDHTSAVKALAWCPFQGNLLATGGGSGDRTIKFWNTHTGACLNSVDTGSQVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLYMAQSPDGCTVATAAADETLRFWNAFGTPEVVAKAAPKARAEPFSHVSRIR*