AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0344110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344110 MtrunA17_Chr2g0295841 98.496 1330 20 0 1 1330 1 1330 0.0 2696
Msa0344110 MtrunA17_Chr7g0270721 84.000 150 24 0 1171 1320 1 150 7.49e-67 222
Msa0344110 MtrunA17_Chr7g0270751 77.953 127 28 0 378 504 2 128 1.03e-54 186
Msa0344110 MtrunA17_Chr6g0468091 82.407 108 16 2 1 108 1 105 7.31e-49 169
Msa0344110 MtrunA17_Chr4g0067781 82.407 108 16 2 1 108 1 105 1.25e-48 168
Msa0344110 MtrunA17_Chr7g0270741 96.078 51 2 0 877 927 1 51 1.26e-26 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344110 AT4G15890.1 55.572 1355 536 21 1 1330 1 1314 0.0 1440
Msa0344110 AT4G15890.2 55.277 1355 536 22 1 1330 1 1310 0.0 1426

Find 314 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAGTAGCTTATTTAATTT+TGG 0.113880 3_1:+2680071 None:intergenic
TCAACTTTCTGTACAGAATT+TGG 0.159430 3_1:+2683771 None:intergenic
GTCAAGGGAAAACTAATTTA+AGG 0.174735 3_1:-2683257 Msa0344110:CDS
CCTTTACTTGGCCCACTTCT+AGG 0.191201 3_1:+2680242 None:intergenic
TGTACAGAATTTGGCGAATT+AGG 0.194372 3_1:+2683780 None:intergenic
GATTGATTTGCAACTGATTT+TGG 0.198404 3_1:+2678148 None:intergenic
TCCGAGGTATTTGGCAAATA+AGG 0.215277 3_1:-2683391 Msa0344110:CDS
ACAAGTTCTCACATTCTTCT+TGG 0.241403 3_1:+2681859 None:intergenic
TTGAAAGAGTTTATGGGTTT+TGG 0.253401 3_1:-2683009 Msa0344110:CDS
AACTGATCCTGCTGCTGATT+TGG 0.255991 3_1:-2681277 Msa0344110:CDS
AATTCCCAGTCCACTGCTTT+TGG 0.261434 3_1:+2681477 None:intergenic
TGGACTCACGATGTCCATTA+TGG 0.262095 3_1:+2678970 None:intergenic
GAAAACTAATTTAAGGCTTT+TGG 0.283506 3_1:-2683250 Msa0344110:CDS
ACCTATGAGGGGACTGTTCT+TGG 0.287289 3_1:+2678333 None:intergenic
CCTGACTTCCGACCTTTACT+TGG 0.287942 3_1:+2680230 None:intergenic
TGAGCGTTGTTATTAGGATT+TGG 0.290127 3_1:+2683867 None:intergenic
ATCTGCTGAGCGTTGTTATT+AGG 0.290172 3_1:+2683861 None:intergenic
GGCACTTCAGAATATAATTA+AGG 0.300402 3_1:-2681598 Msa0344110:CDS
TCGACTTTGGCGCAGGTTGT+TGG 0.302857 3_1:-2683066 Msa0344110:CDS
CTGTACAGAAAGTTGATGTT+AGG 0.308042 3_1:-2683764 Msa0344110:CDS
ATTACAGCTATTTATACAAT+TGG 0.312928 3_1:-2680179 Msa0344110:CDS
AGGAGTGAAGAGAGTGAAAA+CGG 0.322214 3_1:+2683944 None:intergenic
GGGAATGGTTGAGGAGGGTT+TGG 0.322634 3_1:+2684108 None:intergenic
GGTTGTTAGGGTTATGGAAG+TGG 0.322925 3_1:-2683319 Msa0344110:CDS
GAGCGTTGTTATTAGGATTT+GGG 0.323153 3_1:+2683868 None:intergenic
AATGGAGGTTGTTAGGGTTA+TGG 0.325419 3_1:-2683325 Msa0344110:CDS
TGAGAAATTAGTTAATGTTA+TGG 0.327011 3_1:-2683724 Msa0344110:CDS
CATTGTTGAAGGATCCTTTA+GGG 0.329085 3_1:-2683200 Msa0344110:CDS
ACATTGTTGAAGGATCCTTT+AGG 0.330598 3_1:-2683201 Msa0344110:CDS
CATAGAGTTGAAACGTCTAT+TGG 0.330825 3_1:-2678359 Msa0344110:CDS
CGACTTTGGCGCAGGTTGTT+GGG 0.334679 3_1:-2683065 Msa0344110:CDS
AATGCATTTATTTGTACAAC+TGG 0.343052 3_1:+2681396 None:intergenic
AAGAAGCAATAGTCTTGAAA+TGG 0.346434 3_1:-2680358 Msa0344110:CDS
GGGAATTTCTTCATCATCAT+TGG 0.352263 3_1:-2681461 Msa0344110:CDS
TTCTATTATTTGAGAAGCTC+TGG 0.361263 3_1:+2680319 None:intergenic
GAGAAATTAGTTAATGTTAT+GGG 0.362090 3_1:-2683723 Msa0344110:CDS
TTCTCTCATGGAATGCCTTC+GGG 0.365074 3_1:-2678311 Msa0344110:CDS
CCCCATTGCAAATCTCTCTA+AGG 0.370517 3_1:+2681694 None:intergenic
GAGAGAAGAGAGGGATTGTT+CGG 0.373389 3_1:+2684130 None:intergenic
GGAACGGAGGAAGGAGAGAA+AGG 0.375629 3_1:+2683917 None:intergenic
CTAAGGGTTGGGAATGGTTG+AGG 0.376575 3_1:+2684099 None:intergenic
GGCGTCGTAGAGTGGGTCTA+AGG 0.378436 3_1:+2684082 None:intergenic
GTTCTCTCATGGAATGCCTT+CGG 0.389730 3_1:-2678312 Msa0344110:CDS
CTTGTTTCAAGAACTTGTTT+TGG 0.390953 3_1:-2681841 Msa0344110:CDS
GATTGTTCGGAGAGTGGTTG+TGG 0.394788 3_1:+2684143 None:intergenic
CGGTGGCGATTGGAGGGATT+AGG 0.395555 3_1:+2684045 None:intergenic
GCCTGAAAAGAGCTGTCATT+TGG 0.397728 3_1:+2677775 None:intergenic
ATTGCTATCGAGACTGTTGC+AGG 0.399185 3_1:-2679443 Msa0344110:intron
CCTAGAGGGATTACGTGAAA+TGG 0.404664 3_1:-2679249 Msa0344110:intron
CAATGGGGAGGTGAGTCCTT+GGG 0.404868 3_1:-2681679 Msa0344110:CDS
GGTACACTGCTCTTATTGAT+TGG 0.405150 3_1:-2679762 Msa0344110:intron
TCTTGTTGCAGAGAGGTTGC+AGG 0.407155 3_1:+2680047 None:intergenic
TGTTGTAATGCCGAAGTCTC+AGG 0.408410 3_1:-2683490 Msa0344110:CDS
ACCTGATGTTGCTAAGAATC+TGG 0.414696 3_1:-2678125 Msa0344110:CDS
CTCAATATTGAAGATGCAAC+TGG 0.416969 3_1:-2678691 Msa0344110:CDS
GTGATGATAGTGTGCAATAA+TGG 0.417227 3_1:+2680110 None:intergenic
AATGACTGCCGTGCCCATAA+TGG 0.422052 3_1:-2678984 Msa0344110:CDS
GCGAGGAGAGAGTGAGGTGG+TGG 0.422409 3_1:+2684008 None:intergenic
GCCAGATTCTTAGCAACATC+AGG 0.423271 3_1:+2678124 None:intergenic
GGAGTGAAGAGAGTGAAAAC+GGG 0.424602 3_1:+2683945 None:intergenic
GGCTCATAACTTGCTCAAAC+GGG 0.425446 3_1:-2681256 Msa0344110:CDS
CCACTCGGTTGTTACCGTTT+CGG 0.425660 3_1:+2681926 None:intergenic
TGAGGTTCAGTATGGTAGAT+TGG 0.427676 3_1:-2683610 Msa0344110:CDS
TAGAATTTCTGCACATAACT+TGG 0.428426 3_1:+2678735 None:intergenic
GAGAGGGATTGTTCGGAGAG+TGG 0.428653 3_1:+2684137 None:intergenic
ATAACAACGCTCAGCAGATT+CGG 0.429751 3_1:-2683857 Msa0344110:CDS
TTGATGAATCAGAAAAGATT+AGG 0.430112 3_1:-2679189 Msa0344110:CDS
AAGGAGATACAGAATTCCTT+GGG 0.430278 3_1:+2681713 None:intergenic
GCAATGGGGAGGTGAGTCCT+TGG 0.433317 3_1:-2681680 Msa0344110:CDS
TTAAGGTGTCCGAGTCCATC+TGG 0.441441 3_1:-2681581 Msa0344110:CDS
AATTTCCTTTAGCAAAGAAC+GGG 0.441442 3_1:+2677997 None:intergenic
TAAGAGACACCGTGTGATCT+TGG 0.442265 3_1:+2679501 None:intergenic
AGGGAATCAATGAGATGCTT+AGG 0.443031 3_1:-2682957 Msa0344110:CDS
CAGCTGCAGTTCTAGATATT+CGG 0.443480 3_1:+2681817 None:intergenic
TTACAGCTATTTATACAATT+GGG 0.444781 3_1:-2680178 Msa0344110:CDS
TTCTTCCAAAAGCAGTGGAC+TGG 0.446024 3_1:-2681482 Msa0344110:CDS
AACAGCCCGTTCTTTGCTAA+AGG 0.446610 3_1:-2678002 Msa0344110:CDS
GTTGTTAGGGTTATGGAAGT+GGG 0.446778 3_1:-2683318 Msa0344110:CDS
AAAGAAACCAAGCGCCTTGT+GGG 0.446929 3_1:+2681523 None:intergenic
GATGTTAGTGCTACGATTCG+AGG 0.446972 3_1:-2683099 Msa0344110:CDS
TTCGAAACCTCCCCATGCTC+CGG 0.447033 3_1:+2683549 None:intergenic
CCAAGTAAAGGTCGGAAGTC+AGG 0.453017 3_1:-2680230 Msa0344110:CDS
GAATGAGATTGATGACATAT+TGG 0.453212 3_1:-2678269 Msa0344110:CDS
TGTACAGAAAGTTGATGTTA+GGG 0.456506 3_1:-2683763 Msa0344110:CDS
TGTACAAATAAATGCATTTG+AGG 0.457062 3_1:-2681391 Msa0344110:CDS
GCGACGGAGGGAACGGAGGA+AGG 0.459005 3_1:+2683908 None:intergenic
AGGGCGAGCTTTGTCGACTT+TGG 0.459162 3_1:-2683079 Msa0344110:CDS
TTTGGTGATGGAAATGATGC+GGG 0.460407 3_1:-2682991 Msa0344110:CDS
AGCTTTGTCGACTTTGGCGC+AGG 0.461963 3_1:-2683073 Msa0344110:CDS
CTATATTCCTCTGTTTGTAC+AGG 0.464460 3_1:-2679949 Msa0344110:intron
GTTCAGTATGGTAGATTGGT+TGG 0.465468 3_1:-2683606 Msa0344110:CDS
CTTGCTATGGTTCAGCCAGA+TGG 0.465632 3_1:+2681566 None:intergenic
AATCAACGATTTCAAACTCT+CGG 0.466014 3_1:+2683677 None:intergenic
TTTCGGTGTGGTGGGTTTCG+CGG 0.466538 3_1:+2684168 None:intergenic
TGTTTCTCTACTAAAGCAAA+TGG 0.467960 3_1:-2678785 Msa0344110:CDS
TCCTTAGAGAGATTTGCAAT+GGG 0.468873 3_1:-2681695 Msa0344110:CDS
TGGCTCATAACTTGCTCAAA+CGG 0.469215 3_1:-2681257 Msa0344110:CDS
GCTTTCCGTTCGTGATTCGT+TGG 0.470396 3_1:+2678950 None:intergenic
GAATCTTGTGACATTGTTGA+AGG 0.471468 3_1:-2683211 Msa0344110:CDS
GACTTCGGCATTACAACAAA+AGG 0.473353 3_1:+2683495 None:intergenic
TCCATTGCGGTGGCGATTGG+AGG 0.474305 3_1:+2684038 None:intergenic
ACGTTTCAACTCTATGAAGA+TGG 0.474677 3_1:+2678366 None:intergenic
GTAGAGTGGGTCTAAGGGTT+GGG 0.474958 3_1:+2684088 None:intergenic
GGAAGAAGGGAATGTGGCGT+GGG 0.475967 3_1:-2683160 Msa0344110:CDS
TTGCACACTATCATCACCTC+TGG 0.476824 3_1:-2680104 Msa0344110:CDS
GAAAGGTTTAGACAACGAAA+TGG 0.478113 3_1:-2681748 Msa0344110:CDS
TAGAATGCAATAATGTTGCC+TGG 0.478158 3_1:-2681356 Msa0344110:CDS
CATTGTTGCTTAACGCTGAT+CGG 0.478297 3_1:-2677724 Msa0344110:three_prime_UTR
CCAGTGAAAGACTTGACTTT+GGG 0.478615 3_1:+2677932 None:intergenic
TAAGGAGATACAGAATTCCT+TGG 0.479653 3_1:+2681712 None:intergenic
GAGGGTTTGGAGAGAAGAGA+GGG 0.479717 3_1:+2684121 None:intergenic
ACCAGTGAAAGACTTGACTT+TGG 0.479828 3_1:+2677931 None:intergenic
TGGGTTTAATTCATCTTGAT+CGG 0.480437 3_1:-2683704 Msa0344110:CDS
GTTGAATCACAAAATTGTTA+CGG 0.483244 3_1:-2681619 Msa0344110:CDS
GAGAAGGTGTGTGGATGAGA+AGG 0.484222 3_1:-2682935 Msa0344110:CDS
GGACTCACGATGTCCATTAT+GGG 0.484381 3_1:+2678971 None:intergenic
ACTAACTTGACTGCTCTACT+TGG 0.484657 3_1:-2682880 Msa0344110:CDS
TGAGCCGAGGGCGTTGGCAG+TGG 0.485786 3_1:-2683355 Msa0344110:CDS
GGGTTGGGAATGGTTGAGGA+GGG 0.488038 3_1:+2684103 None:intergenic
GATGCGGGTGTCGGAGGAAA+GGG 0.489627 3_1:-2682976 Msa0344110:CDS
TCTTCCAAAAGCAGTGGACT+GGG 0.490628 3_1:-2681481 Msa0344110:CDS
AAACTCCTCACCTGAGACTT+CGG 0.490716 3_1:+2683480 None:intergenic
AAATGGATCTTCAACTAGAA+AGG 0.491312 3_1:-2678434 Msa0344110:CDS
AGGGGTGAATTCGACGGATG+AGG 0.491789 3_1:-2683181 Msa0344110:CDS
AACTGGACAGTCTGTTCTAC+AGG 0.493929 3_1:-2678674 Msa0344110:intron
ACGAATGCTAAGAAGTGAAT+CGG 0.494372 3_1:+2682810 None:intergenic
GGCAAACTTTGCCTTGCTGA+TGG 0.495244 3_1:-2679987 Msa0344110:CDS
CCCAAAGTCAAGTCTTTCAC+TGG 0.496013 3_1:-2677932 Msa0344110:CDS
TTGGAGAGAGGAGGAAAGAG+AGG 0.498035 3_1:+2683973 None:intergenic
ATTCATCAACAAGTGACAAA+AGG 0.500825 3_1:+2679203 None:intergenic
GGACTGCCCCACAAGGCGCT+TGG 0.500971 3_1:-2681530 Msa0344110:CDS
TGCGCTGGTGAAGCGTTGTT+CGG 0.501383 3_1:-2683121 Msa0344110:CDS
GGAGATTTCTGTTACGATGC+GGG 0.501515 3_1:+2684196 None:intergenic
GAGTCCATTGCGGTGGCGAT+TGG 0.501794 3_1:+2684035 None:intergenic
AACTAGAAAGGCTATAACTC+AGG 0.502839 3_1:-2678422 Msa0344110:CDS
AGAAGCAATAGTCTTGAAAT+GGG 0.503507 3_1:-2680357 Msa0344110:CDS
CATCTCCGGTGGCGCTACTC+CGG 0.504552 3_1:+2684235 None:intergenic
CGGCAGACTTAGAAGAAGAA+GGG 0.504866 3_1:-2678462 Msa0344110:CDS
GAGAAGCTCTGGATAGAACT+TGG 0.504985 3_1:+2680330 None:intergenic
GCCCTCGGCTCAGCTTTATC+CGG 0.505864 3_1:+2683366 None:intergenic
GTGGTGGGTTTCGCGGAGGT+CGG 0.507582 3_1:+2684175 None:intergenic
AGGAAGAAGGGAATGTGGCG+TGG 0.508286 3_1:-2683161 Msa0344110:CDS
CGGAGTAGCGCCACCGGAGA+TGG 0.508591 3_1:-2684234 Msa0344110:exon
AGCAGATTCGGAAGCGGAGA+CGG 0.508647 3_1:-2683845 Msa0344110:CDS
AATTCGACGGATGAGGAAGA+AGG 0.510292 3_1:-2683174 Msa0344110:CDS
CTCCTTAGAGAGATTTGCAA+TGG 0.511786 3_1:-2681696 Msa0344110:CDS
GGAGGGTTTGGAGAGAAGAG+AGG 0.512339 3_1:+2684120 None:intergenic
TCGGCAGACTTAGAAGAAGA+AGG 0.512477 3_1:-2678463 Msa0344110:CDS
GAATACTCGGTCACTAGCCC+AGG 0.514327 3_1:+2681338 None:intergenic
TCCATGCGTTCACAAGGGTC+GGG 0.515428 3_1:-2677641 Msa0344110:three_prime_UTR
ACCAAGAACAGTCCCCTCAT+AGG 0.515821 3_1:-2678334 Msa0344110:CDS
GCCCGACCCTTGTGAACGCA+TGG 0.516080 3_1:+2677640 None:intergenic
TATTCAAGGGTGGCTGACCA+TGG 0.516492 3_1:-2680009 Msa0344110:CDS
TATAACTCAGGCAGTCAAGA+AGG 0.516990 3_1:-2678410 Msa0344110:CDS
CATTAGAGATTGTTTGCAAG+AGG 0.517525 3_1:+2681316 None:intergenic
AAACTATTATATGCTAAAAG+AGG 0.518019 3_1:+2679029 None:intergenic
GATTAGGTGGGAAGGTGAAA+CGG 0.519372 3_1:+2684061 None:intergenic
CGTAGAGTGGGTCTAAGGGT+TGG 0.519519 3_1:+2684087 None:intergenic
GTACAAATAAATGCATTTGA+GGG 0.520142 3_1:-2681390 Msa0344110:CDS
ATCTAGAGGTGATAAGCGCT+TGG 0.520855 3_1:-2677900 Msa0344110:CDS
AGGAAGGAGAGAAAGGAGAG+AGG 0.521205 3_1:+2683924 None:intergenic
ATCAACGATTTCAAACTCTC+GGG 0.522470 3_1:+2683678 None:intergenic
ATCCATGCGTTCACAAGGGT+CGG 0.523364 3_1:-2677642 Msa0344110:three_prime_UTR
CCTAGAAGTGGGCCAAGTAA+AGG 0.525097 3_1:-2680242 Msa0344110:CDS
AGTGTTTCGTCGTCCATCTC+CGG 0.525333 3_1:+2684221 None:intergenic
CTCTAGAGGCACCTAGAAGA+AGG 0.526586 3_1:+2677799 None:intergenic
ATGCCTTCGGGTCCTTCTCA+AGG 0.526670 3_1:-2678299 Msa0344110:CDS
AAATCAGCAGCAGGATCAGT+TGG 0.526688 3_1:+2681279 None:intergenic
TAAAGCTGAGCCGAGGGCGT+TGG 0.527058 3_1:-2683361 Msa0344110:CDS
CCCTCCAATCGCCACCGCAA+TGG 0.528014 3_1:-2684039 Msa0344110:CDS
TTCTGCACATAACTTGGCAA+AGG 0.530806 3_1:+2678741 None:intergenic
AACTTGACTGCTCTACTTGG+AGG 0.530826 3_1:-2682877 Msa0344110:CDS
ACAATTGCAGGAGCTTGAAA+AGG 0.532349 3_1:-2679842 Msa0344110:intron
GTGGGTCTAAGGGTTGGGAA+TGG 0.532512 3_1:+2684093 None:intergenic
AAATCCACTGCCAACGCCCT+CGG 0.534411 3_1:+2683351 None:intergenic
AAAGGTTGCTAGAAGATGCT+CGG 0.535279 3_1:+2678759 None:intergenic
TTGTGTAATGAGGTTCAGTA+TGG 0.536718 3_1:-2683618 Msa0344110:CDS
TCCGTCGAATTCACCCCTAA+AGG 0.541701 3_1:+2683186 None:intergenic
ATGGTTCAGCCAGATGGACT+CGG 0.544136 3_1:+2681572 None:intergenic
ATTCCATGAGAGAACCTATG+AGG 0.546255 3_1:+2678320 None:intergenic
AGCAATTCAAAGATGCATGC+TGG 0.546816 3_1:+2677599 None:intergenic
TGAAAGCGCGACGGAGGGAA+CGG 0.547103 3_1:+2683901 None:intergenic
TGGCGATTGGAGGGATTAGG+TGG 0.547407 3_1:+2684048 None:intergenic
AAGGTTGCTAGAAGATGCTC+GGG 0.547680 3_1:+2678760 None:intergenic
ACAAACACATGAACAAAATG+AGG 0.547734 3_1:-2678089 Msa0344110:CDS
GATTTGGTGTTTGGATGCGC+TGG 0.548777 3_1:-2683136 Msa0344110:CDS
CTTGTTGCAGAGAGGTTGCA+GGG 0.550049 3_1:+2680048 None:intergenic
GAAGAAGGGAATGTGGCGTG+GGG 0.550877 3_1:-2683159 Msa0344110:CDS
TAATTTCCTTTAGCAAAGAA+CGG 0.552386 3_1:+2677996 None:intergenic
GATGGAAATGATGCGGGTGT+CGG 0.552947 3_1:-2682985 Msa0344110:CDS
TGATGCGGGTGTCGGAGGAA+AGG 0.554659 3_1:-2682977 Msa0344110:CDS
GGTGAAACGGCGTCGTAGAG+TGG 0.556633 3_1:+2684074 None:intergenic
GCCTTATTTGCCAAATACCT+CGG 0.556922 3_1:+2683390 None:intergenic
CGTTTCAACTCTATGAAGAT+GGG 0.559362 3_1:+2678367 None:intergenic
GCAAACTTTGCCTTGCTGAT+GGG 0.560882 3_1:-2679986 Msa0344110:CDS
CAAAAGTACCTCGGAAAGAG+AGG 0.561434 3_1:+2682774 None:intergenic
GTGAAACGGCGTCGTAGAGT+GGG 0.563314 3_1:+2684075 None:intergenic
TTATGAGCCAAATCAGCAGC+AGG 0.563977 3_1:+2681270 None:intergenic
CAGAACATTCTCAGCCGAAA+CGG 0.566731 3_1:-2681940 Msa0344110:CDS
CCATTGCGGTGGCGATTGGA+GGG 0.568044 3_1:+2684039 None:intergenic
AAATCTCGTTCTGCACAGAC+CGG 0.568248 3_1:-2684254 Msa0344110:five_prime_UTR
TTCAATATTGAGCATACCAT+CGG 0.569235 3_1:+2678702 None:intergenic
TGCCTTCTCACAAGTTCACA+AGG 0.569805 3_1:+2679475 None:intergenic
AATATATCCATGCGTTCACA+AGG 0.570156 3_1:-2677647 Msa0344110:three_prime_UTR
ATAGCAAGCCAATAGAAAAG+TGG 0.573840 3_1:-2681551 Msa0344110:CDS
TTGTTAGGGTTATGGAAGTG+GGG 0.574191 3_1:-2683317 Msa0344110:CDS
CTTGACAAGCATAAAGTGAA+AGG 0.575554 3_1:-2681432 Msa0344110:CDS
TCCCCTCATAGGTTCTCTCA+TGG 0.575975 3_1:-2678323 Msa0344110:CDS
ACCGGATAAAGCTGAGCCGA+GGG 0.577203 3_1:-2683367 Msa0344110:CDS
TCCTTTAGGGGTGAATTCGA+CGG 0.578077 3_1:-2683187 Msa0344110:CDS
TATGTTGTGAAAATGAGTCA+AGG 0.578254 3_1:-2683273 Msa0344110:CDS
TGCGATTGAATTGTGTAATG+AGG 0.578867 3_1:-2683628 Msa0344110:CDS
AAAAGAAACCAAGCGCCTTG+TGG 0.579082 3_1:+2681522 None:intergenic
TGAGAAGCGAGGAGAGAGTG+AGG 0.579616 3_1:+2684002 None:intergenic
ATAGCACTCATATCAGCAGA+TGG 0.580065 3_1:+2680137 None:intergenic
CACTCGCGTGTCATCTGAGT+CGG 0.580526 3_1:-2678482 Msa0344110:CDS
AGAATGCAATAATGTTGCCT+GGG 0.580526 3_1:-2681355 Msa0344110:CDS
TTCTTCACTCCACCTAGAAG+TGG 0.580939 3_1:-2680254 Msa0344110:CDS
GGTTTCGAAGACAGCTGCTG+AGG 0.583201 3_1:-2683535 Msa0344110:CDS
ATTCAAGGGTGGCTGACCAT+GGG 0.584477 3_1:-2680008 Msa0344110:CDS
CACAATTCAATCGCAGTCAA+CGG 0.585667 3_1:+2683636 None:intergenic
AGCTAAAGCAACAGTTGCTG+AGG 0.586473 3_1:-2678185 Msa0344110:CDS
TTACTTGGCCCACTTCTAGG+TGG 0.586631 3_1:+2680245 None:intergenic
CACGATGTCCATTATGGGCA+CGG 0.586746 3_1:+2678976 None:intergenic
GAAGTGGTGCTGAAGACAAT+GGG 0.587028 3_1:-2682844 Msa0344110:CDS
AGTATTTCTTCCAAAAGCAG+TGG 0.587499 3_1:-2681487 Msa0344110:CDS
ATCCTTGTGAACTTGTGAGA+AGG 0.589225 3_1:-2679477 Msa0344110:CDS
GGCAGACTTAGAAGAAGAAG+GGG 0.589731 3_1:-2678461 Msa0344110:CDS
ATTCTAGCTGCAGCTTCCGA+TGG 0.590327 3_1:-2678718 Msa0344110:CDS
AGGGTTGGGAATGGTTGAGG+AGG 0.591131 3_1:+2684102 None:intergenic
CATTCTTGTAGTCCTTGAGA+AGG 0.591165 3_1:+2678287 None:intergenic
CACCGGATAAAGCTGAGCCG+AGG 0.591570 3_1:-2683368 Msa0344110:CDS
CAATAATATTGTGGTCACAA+TGG 0.592756 3_1:-2679800 Msa0344110:CDS
GCGTCGTAGAGTGGGTCTAA+GGG 0.594206 3_1:+2684083 None:intergenic
TTGCTAAAGGAAATTAACAA+GGG 0.595622 3_1:-2677989 Msa0344110:CDS
TGTTAGGGTTATGGAAGTGG+GGG 0.596595 3_1:-2683316 Msa0344110:CDS
AAAGCGCAAGTCATTGTCAA+AGG 0.597675 3_1:-2680204 Msa0344110:CDS
ATGTTGTGAAAATGAGTCAA+GGG 0.598029 3_1:-2683272 Msa0344110:CDS
GTATTTGGCAAATAAGGCAC+CGG 0.598211 3_1:-2683385 Msa0344110:CDS
AGATGGTGTGAGGAAAGCGT+TGG 0.599015 3_1:-2683421 Msa0344110:CDS
ACAGACCGGAGTAGCGCCAC+CGG 0.599499 3_1:-2684240 Msa0344110:five_prime_UTR
ATAACTCAGGCAGTCAAGAA+GGG 0.600058 3_1:-2678409 Msa0344110:CDS
TGCACACTATCATCACCTCT+GGG 0.600442 3_1:-2680103 Msa0344110:CDS
CGGTGTGGTGGGTTTCGCGG+AGG 0.601076 3_1:+2684171 None:intergenic
TTTGCTAAAGGAAATTAACA+AGG 0.606282 3_1:-2677990 Msa0344110:CDS
AAAGTCAAGTCTTTCACTGG+TGG 0.606408 3_1:-2677929 Msa0344110:CDS
TCAATGAGATGCTTAGGAGA+AGG 0.607762 3_1:-2682951 Msa0344110:CDS
AAGAAGGGAATGTGGCGTGG+GGG 0.609032 3_1:-2683158 Msa0344110:CDS
TAGAGAGATTTGCAATGGGG+AGG 0.610540 3_1:-2681691 Msa0344110:CDS
CCAAAATTAAATAAGCTACT+CGG 0.610998 3_1:-2680071 Msa0344110:CDS
ACGCTCAGCAGATTCGGAAG+CGG 0.613059 3_1:-2683851 Msa0344110:CDS
TTCCATGAGAGAACCTATGA+GGG 0.613927 3_1:+2678321 None:intergenic
AGCTGCTGCCTCTCTTTCCG+AGG 0.614927 3_1:-2682782 Msa0344110:intron
TGGAGGTGCTATTGATGAAG+TGG 0.616257 3_1:-2682860 Msa0344110:CDS
ATTCGACGGATGAGGAAGAA+GGG 0.616359 3_1:-2683173 Msa0344110:CDS
AGAGGAAGACGTGAGAAGCG+AGG 0.616771 3_1:+2683991 None:intergenic
TTGTTTGCAAGAGGAATACT+CGG 0.617662 3_1:+2681325 None:intergenic
AGCTCTTCGCAATAATATTG+TGG 0.617862 3_1:-2679809 Msa0344110:CDS
TTGCAAGCTTCCCATCAGCA+AGG 0.619436 3_1:+2679976 None:intergenic
TTTGAAACCGGAGCATGGGG+AGG 0.620577 3_1:-2683556 Msa0344110:CDS
ATTCAACATGCATGCAACAG+AGG 0.620770 3_1:-2681226 Msa0344110:intron
AGGTAGTGAAAAGGCTAGTG+TGG 0.621538 3_1:-2683034 Msa0344110:CDS
GGATGAGGAAGAAGGGAATG+TGG 0.622612 3_1:-2683166 Msa0344110:CDS
GGAAATGATGCGGGTGTCGG+AGG 0.622763 3_1:-2682982 Msa0344110:CDS
AGGTTCGATATATGAAGAGG+TGG 0.623247 3_1:+2681794 None:intergenic
AGCAAGGCAAAGTTTGCCCA+TGG 0.623683 3_1:+2679992 None:intergenic
TAGCACTCATATCAGCAGAT+GGG 0.623751 3_1:+2680138 None:intergenic
ATTGGAGGGATTAGGTGGGA+AGG 0.623945 3_1:+2684053 None:intergenic
GAAGCGAGGAGAGAGTGAGG+TGG 0.624812 3_1:+2684005 None:intergenic
ATGTTAGTGCTACGATTCGA+GGG 0.626901 3_1:-2683098 Msa0344110:CDS
TGCTAAAGGAAATTAACAAG+GGG 0.628435 3_1:-2677988 Msa0344110:CDS
ATGCGTTCACAAGGGTCGGG+CGG 0.630575 3_1:-2677638 Msa0344110:three_prime_UTR
GGCGATTGGAGGGATTAGGT+GGG 0.630744 3_1:+2684049 None:intergenic
AGGAGATTCTTGTTGCAGAG+AGG 0.631095 3_1:+2680040 None:intergenic
GAAAAGTGGACTGCCCCACA+AGG 0.631853 3_1:-2681537 Msa0344110:CDS
GGCAGGTTCGATATATGAAG+AGG 0.637844 3_1:+2681791 None:intergenic
GAGTGAAGAGAGTGAAAACG+GGG 0.638437 3_1:+2683946 None:intergenic
AGTTTGAGTAGGGATTCAGA+TGG 0.638669 3_1:-2683438 Msa0344110:CDS
AAGAAACCAAGCGCCTTGTG+GGG 0.639811 3_1:+2681524 None:intergenic
AAGCGCGACGGAGGGAACGG+AGG 0.641701 3_1:+2683904 None:intergenic
AGCTGTCATTTGGACTCTAG+AGG 0.642391 3_1:+2677785 None:intergenic
TGTTGCTAAGAATCTGGCAA+AGG 0.644310 3_1:-2678119 Msa0344110:CDS
ACAAAATGAGGACAGTGACA+AGG 0.646049 3_1:-2678077 Msa0344110:CDS
ATTGTTGAAGGATCCTTTAG+GGG 0.648131 3_1:-2683199 Msa0344110:CDS
TCTTCACTCCACCTAGAAGT+GGG 0.648689 3_1:-2680253 Msa0344110:CDS
AAGGTGTGTGGATGAGAAGG+CGG 0.649780 3_1:-2682932 Msa0344110:CDS
TCATTATCAGCTATTTGACG+AGG 0.652708 3_1:+2681891 None:intergenic
GATGCTTAGGAGAAGGTGTG+TGG 0.653593 3_1:-2682944 Msa0344110:CDS
ACGTTCAAAGAACTAAGTTG+TGG 0.654052 3_1:+2677956 None:intergenic
GTAGGGATTCAGATGGTGTG+AGG 0.654607 3_1:-2683431 Msa0344110:CDS
TGAAGTGGTGCTGAAGACAA+TGG 0.658212 3_1:-2682845 Msa0344110:CDS
AGGGATTACGTGAAATGGAG+AGG 0.659576 3_1:-2679244 Msa0344110:CDS
ACTGGTGGACTCGTATCTAG+AGG 0.662266 3_1:-2677914 Msa0344110:CDS
GTTTCGTCGTCCATCTCCGG+TGG 0.662914 3_1:+2684224 None:intergenic
TGGAGATGAGTCCATTGCGG+TGG 0.663224 3_1:+2684028 None:intergenic
CGGAGATTTCTGTTACGATG+CGG 0.667244 3_1:+2684195 None:intergenic
AGACCAACCTGTACAAACAG+AGG 0.668204 3_1:+2679942 None:intergenic
GGTGCTGAAGACAATGGGAA+TGG 0.668697 3_1:-2682839 Msa0344110:CDS
TGAGTCCAACGAATCACGAA+CGG 0.669431 3_1:-2678955 Msa0344110:CDS
GAAGTGGGCCAAGTAAAGGT+CGG 0.670816 3_1:-2680238 Msa0344110:CDS
AGTCCTTGAGAAGGACCCGA+AGG 0.680364 3_1:+2678296 None:intergenic
TAATGCCGAAGTCTCAGGTG+AGG 0.684927 3_1:-2683485 Msa0344110:CDS
CCTTAGAGAGATTTGCAATG+GGG 0.688090 3_1:-2681694 Msa0344110:CDS
AGGAGATACAGAATTCCTTG+GGG 0.691571 3_1:+2681714 None:intergenic
AGGAACTGAATGTAGCCACT+CGG 0.693346 3_1:+2681911 None:intergenic
GTTACATAACCAAGATCACA+CGG 0.707602 3_1:-2679510 Msa0344110:CDS
CGACTCAGATGACACGCGAG+TGG 0.712878 3_1:+2678483 None:intergenic
TCCATGAGAGAACCTATGAG+GGG 0.716533 3_1:+2678322 None:intergenic
GCAGACTTAGAAGAAGAAGG+GGG 0.719754 3_1:-2678460 Msa0344110:CDS
GGAGATACAGAATTCCTTGG+GGG 0.722911 3_1:+2681715 None:intergenic
TGGTGGAGATGAGTCCATTG+CGG 0.728966 3_1:+2684025 None:intergenic
ATATATCCATGCGTTCACAA+GGG 0.737199 3_1:-2677646 Msa0344110:three_prime_UTR
CCGAAACGGTAACAACCGAG+TGG 0.752040 3_1:-2681926 Msa0344110:CDS
AGTGAAGAGAGTGAAAACGG+GGG 0.752960 3_1:+2683947 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATACAAATAACTTTTTTT+AGG - chr3_1:2679383-2679402 Msa0344110:intron 10.0%
!! ATATATATATATATAGTGTT+TGG - chr3_1:2679721-2679740 Msa0344110:intron 10.0%
!!! AAACAAAATATGTTTTGATT+AGG + chr3_1:2682029-2682048 None:intergenic 15.0%
!!! AATCAAAACATATTTTGTTT+TGG - chr3_1:2682029-2682048 Msa0344110:intron 15.0%
!!! ATCAAAACATATTTTGTTTT+GGG - chr3_1:2682030-2682049 Msa0344110:intron 15.0%
!! ATGTTATTCAAACATAAATT+GGG + chr3_1:2683336-2683355 None:intergenic 15.0%
!! AATGTTATTCAAACATAAAT+TGG + chr3_1:2683337-2683356 None:intergenic 15.0%
!!! TTGAACATTTTTCTTGTTTT+TGG + chr3_1:2678082-2678101 None:intergenic 20.0%
!! TGAGAAATTAGTTAATGTTA+TGG - chr3_1:2678173-2678192 Msa0344110:CDS 20.0%
!! GAGAAATTAGTTAATGTTAT+GGG - chr3_1:2678174-2678193 Msa0344110:CDS 20.0%
!!! TTTTGTTATTAGTTTGAGTA+GGG - chr3_1:2678449-2678468 Msa0344110:CDS 20.0%
!! ACAAAAACCTTATGAAAAAA+GGG + chr3_1:2679152-2679171 None:intergenic 20.0%
!! AACAAAAACCTTATGAAAAA+AGG + chr3_1:2679153-2679172 None:intergenic 20.0%
!!! AATGCAAAATTTTGCATATT+TGG - chr3_1:2679215-2679234 Msa0344110:CDS 20.0%
!!! TAGCATAATTGATTTCTATT+TGG - chr3_1:2679773-2679792 Msa0344110:CDS 20.0%
!!! ATTGATTTCTATTTGGATTT+TGG - chr3_1:2679780-2679799 Msa0344110:CDS 20.0%
!! TAGTAAAAAAATACCAAGAA+AGG + chr3_1:2679889-2679908 None:intergenic 20.0%
!!! TTTTCTTAATCTTTGAGAAA+TGG + chr3_1:2680910-2680929 None:intergenic 20.0%
!! CAAAGTAGATAATAATAACT+TGG - chr3_1:2680965-2680984 Msa0344110:intron 20.0%
!! ATTCATATTACATTAATCAG+AGG - chr3_1:2680993-2681012 Msa0344110:intron 20.0%
!! TTCATATTACATTAATCAGA+GGG - chr3_1:2680994-2681013 Msa0344110:intron 20.0%
!! ATAATTTCTTAAGCATAGTT+AGG - chr3_1:2681325-2681344 Msa0344110:CDS 20.0%
!! TAATTTCTTAAGCATAGTTA+GGG - chr3_1:2681326-2681345 Msa0344110:CDS 20.0%
!! ATTACAGCTATTTATACAAT+TGG - chr3_1:2681718-2681737 Msa0344110:CDS 20.0%
!! TTACAGCTATTTATACAATT+GGG - chr3_1:2681719-2681738 Msa0344110:CDS 20.0%
!! ACAAATTGATTAACAAGTAA+TGG - chr3_1:2682232-2682251 Msa0344110:intron 20.0%
!! AAACTATTATATGCTAAAAG+AGG + chr3_1:2682871-2682890 None:intergenic 20.0%
!! TGTTATTCAAACATAAATTG+GGG + chr3_1:2683335-2683354 None:intergenic 20.0%
!! AAGAGAACTAAAAATGTATT+AGG - chr3_1:2684065-2684084 Msa0344110:CDS 20.0%
!!! TTATTGAAGCTTTTTTTGTG+TGG + chr3_1:2677619-2677638 None:intergenic 25.0%
!!! GTTTTGTTATTAGTTTGAGT+AGG - chr3_1:2678448-2678467 Msa0344110:CDS 25.0%
!!! ATTTTATAATGGAGGTTGTT+AGG - chr3_1:2678565-2678584 Msa0344110:intron 25.0%
!!! TTTTATAATGGAGGTTGTTA+GGG - chr3_1:2678566-2678585 Msa0344110:intron 25.0%
!!! GAAAACTAATTTAAGGCTTT+TGG - chr3_1:2678647-2678666 Msa0344110:intron 25.0%
!!! TTTGTTACCCTTTTTTCATA+AGG - chr3_1:2679142-2679161 Msa0344110:intron 25.0%
! ATTCAAGACAAAAATGACAT+AGG + chr3_1:2679251-2679270 None:intergenic 25.0%
!!! AACTTTTTTTAGGCATTCTT+TGG - chr3_1:2679393-2679412 Msa0344110:intron 25.0%
! ATATATAGTGTTTGGTTAAG+AGG - chr3_1:2679729-2679748 Msa0344110:intron 25.0%
! TATATAGTGTTTGGTTAAGA+GGG - chr3_1:2679730-2679749 Msa0344110:intron 25.0%
! ATTCAAGATGGAAAGATAAT+TGG + chr3_1:2679834-2679853 None:intergenic 25.0%
!! ATCGACAGATATATGATTTT+TGG - chr3_1:2679908-2679927 Msa0344110:intron 25.0%
!! GATTTTACTTAACGATATGT+AGG - chr3_1:2679930-2679949 Msa0344110:intron 25.0%
! CCTCTAGTATTAAAAAGAAA+GGG - chr3_1:2680127-2680146 Msa0344110:CDS 25.0%
! AGTATTAAAAAGAAAGGGAA+AGG - chr3_1:2680132-2680151 Msa0344110:CDS 25.0%
! AAAAAAATTTGCACAAACCT+GGG - chr3_1:2680243-2680262 Msa0344110:CDS 25.0%
! GTTGAATCACAAAATTGTTA+CGG - chr3_1:2680278-2680297 Msa0344110:CDS 25.0%
! AATGCATTTATTTGTACAAC+TGG + chr3_1:2680504-2680523 None:intergenic 25.0%
! TGTACAAATAAATGCATTTG+AGG - chr3_1:2680506-2680525 Msa0344110:intron 25.0%
! GTACAAATAAATGCATTTGA+GGG - chr3_1:2680507-2680526 Msa0344110:intron 25.0%
!! ACTAAAAATAGCAATCGTTT+TGG - chr3_1:2681054-2681073 Msa0344110:intron 25.0%
! ATAGAAGTGATAATTTCAAG+AGG + chr3_1:2681127-2681146 None:intergenic 25.0%
! AAGAAGAAAAAGATTACTGT+CGG - chr3_1:2681229-2681248 Msa0344110:CDS 25.0%
! TTGTGAAACTAAGATTATCA+TGG + chr3_1:2681280-2681299 None:intergenic 25.0%
! AAGAAATTATCATAGACTGT+GGG + chr3_1:2681315-2681334 None:intergenic 25.0%
! TAAGAAATTATCATAGACTG+TGG + chr3_1:2681316-2681335 None:intergenic 25.0%
! AATTTCTTAAGCATAGTTAG+GGG - chr3_1:2681327-2681346 Msa0344110:CDS 25.0%
!!! CGAGTAGCTTATTTAATTTT+GGG + chr3_1:2681828-2681847 None:intergenic 25.0%
! CCAAAATTAAATAAGCTACT+CGG - chr3_1:2681826-2681845 Msa0344110:CDS 25.0%
!! TCTCCTTCTTTTTATATTCA+AGG - chr3_1:2681874-2681893 Msa0344110:CDS 25.0%
!! CTCCTTCTTTTTATATTCAA+GGG - chr3_1:2681875-2681894 Msa0344110:CDS 25.0%
! AGAATTATTACTTTATGCTG+AGG - chr3_1:2682271-2682290 Msa0344110:intron 25.0%
!!! CATCAGTTAAAGGTATTAAA+AGG + chr3_1:2682526-2682545 None:intergenic 25.0%
!!! TTACTTTTCTTTTATCCTAG+AGG - chr3_1:2682633-2682652 Msa0344110:intron 25.0%
!! TACTTTTCTTTTATCCTAGA+GGG - chr3_1:2682634-2682653 Msa0344110:intron 25.0%
! TTGATGAATCAGAAAAGATT+AGG - chr3_1:2682708-2682727 Msa0344110:intron 25.0%
!!! CTCTTTGGAAATATTTTGAA+AGG - chr3_1:2682746-2682765 Msa0344110:intron 25.0%
!!! AGCATATAATAGTTTTGTTG+AGG - chr3_1:2682876-2682895 Msa0344110:CDS 25.0%
! TTCTAACCAAATGCTAATTT+GGG + chr3_1:2683000-2683019 None:intergenic 25.0%
! TTTCTAACCAAATGCTAATT+TGG + chr3_1:2683001-2683020 None:intergenic 25.0%
! TGTTTGAATAACATTAACTG+TGG - chr3_1:2683342-2683361 Msa0344110:CDS 25.0%
!! AAGCAATTTTTGAATCACTT+GGG + chr3_1:2683847-2683866 None:intergenic 25.0%
! TAATTTCCTTTAGCAAAGAA+CGG + chr3_1:2683904-2683923 None:intergenic 25.0%
! TTTGCTAAAGGAAATTAACA+AGG - chr3_1:2683907-2683926 Msa0344110:CDS 25.0%
! TTGCTAAAGGAAATTAACAA+GGG - chr3_1:2683908-2683927 Msa0344110:CDS 25.0%
!!! TTGTTTTAACTTTCCCAAAG+CGG - chr3_1:2677575-2677594 Msa0344110:three_prime_UTR 30.0%
TCAACTTTCTGTACAGAATT+TGG + chr3_1:2678129-2678148 None:intergenic 30.0%
!! TGTACAGAAAGTTGATGTTA+GGG - chr3_1:2678134-2678153 Msa0344110:CDS 30.0%
TGGGTTTAATTCATCTTGAT+CGG - chr3_1:2678193-2678212 Msa0344110:CDS 30.0%
AATCAACGATTTCAAACTCT+CGG + chr3_1:2678223-2678242 None:intergenic 30.0%
!! GTGTTCAAAGATTTTGAAAG+AGG - chr3_1:2678317-2678336 Msa0344110:CDS 30.0%
!!! TTTGAAAGAGGTTTTGAAAC+CGG - chr3_1:2678329-2678348 Msa0344110:CDS 30.0%
TATGTTGTGAAAATGAGTCA+AGG - chr3_1:2678624-2678643 Msa0344110:intron 30.0%
ATGTTGTGAAAATGAGTCAA+GGG - chr3_1:2678625-2678644 Msa0344110:intron 30.0%
GTCAAGGGAAAACTAATTTA+AGG - chr3_1:2678640-2678659 Msa0344110:intron 30.0%
!! AACTAATTTAAGGCTTTTGG+CGG - chr3_1:2678650-2678669 Msa0344110:intron 30.0%
! GTTTTTATCAGGTAGTGAAA+AGG - chr3_1:2678854-2678873 Msa0344110:intron 30.0%
!!! TGTGGTTTTGAAAGAGTTTA+TGG - chr3_1:2678881-2678900 Msa0344110:intron 30.0%
!!! GTGGTTTTGAAAGAGTTTAT+GGG - chr3_1:2678882-2678901 Msa0344110:intron 30.0%
! TTGAAAGAGTTTATGGGTTT+TGG - chr3_1:2678888-2678907 Msa0344110:intron 30.0%
TTCTTTGGTTATTTAGTGGA+AGG - chr3_1:2679408-2679427 Msa0344110:intron 30.0%
TCTTTGGTTATTTAGTGGAA+GGG - chr3_1:2679409-2679428 Msa0344110:intron 30.0%
ATATAGTGTTTGGTTAAGAG+GGG - chr3_1:2679731-2679750 Msa0344110:intron 30.0%
!!! TTTGGATTTTGGTTTACTAG+TGG - chr3_1:2679791-2679810 Msa0344110:CDS 30.0%
!!! TTGGATTTTGGTTTACTAGT+GGG - chr3_1:2679792-2679811 Msa0344110:CDS 30.0%
!! CTTGTTTCAAGAACTTGTTT+TGG - chr3_1:2680056-2680075 Msa0344110:CDS 30.0%
! TTCTTTTTAATACTAGAGGC+AGG + chr3_1:2680126-2680145 None:intergenic 30.0%
GCCTCTAGTATTAAAAAGAA+AGG - chr3_1:2680126-2680145 Msa0344110:CDS 30.0%
! CCCTTTCTTTTTAATACTAG+AGG + chr3_1:2680130-2680149 None:intergenic 30.0%
GAAAAAAATTTGCACAAACC+TGG - chr3_1:2680242-2680261 Msa0344110:CDS 30.0%
GGCACTTCAGAATATAATTA+AGG - chr3_1:2680299-2680318 Msa0344110:CDS 30.0%
AACTAAACAAATCCTAACAC+TGG - chr3_1:2680731-2680750 Msa0344110:intron 30.0%
! AATCTTGCCTTATTCTTGAA+TGG - chr3_1:2680761-2680780 Msa0344110:intron 30.0%
TGCAATTGCGACAATTATTA+TGG - chr3_1:2681092-2681111 Msa0344110:intron 30.0%
GCAATTGCGACAATTATTAT+GGG - chr3_1:2681093-2681112 Msa0344110:intron 30.0%
ATCTTAGTTTCACAAGCAAT+CGG - chr3_1:2681285-2681304 Msa0344110:CDS 30.0%
AGAAATTATCATAGACTGTG+GGG + chr3_1:2681314-2681333 None:intergenic 30.0%
! AAGAAGCAATAGTCTTGAAA+TGG - chr3_1:2681539-2681558 Msa0344110:CDS 30.0%
! AGAAGCAATAGTCTTGAAAT+GGG - chr3_1:2681540-2681559 Msa0344110:CDS 30.0%
TTCTATTATTTGAGAAGCTC+TGG + chr3_1:2681581-2681600 None:intergenic 30.0%
!! CCGAGTAGCTTATTTAATTT+TGG + chr3_1:2681829-2681848 None:intergenic 30.0%
CACCCTTGAATATAAAAAGA+AGG + chr3_1:2681880-2681899 None:intergenic 30.0%
! CTTCTTTTTATATTCAAGGG+TGG - chr3_1:2681878-2681897 Msa0344110:CDS 30.0%
CAATAATATTGTGGTCACAA+TGG - chr3_1:2682097-2682116 Msa0344110:intron 30.0%
!! GTAATGGATGATATAAACTG+AGG - chr3_1:2682248-2682267 Msa0344110:intron 30.0%
ATTCAGCATAATGTGAACAT+TGG + chr3_1:2682304-2682323 None:intergenic 30.0%
! ATCAATACAAGAAGCATAGA+GGG + chr3_1:2682560-2682579 None:intergenic 30.0%
ATTCATCAACAAGTGACAAA+AGG + chr3_1:2682697-2682716 None:intergenic 30.0%
TTTACCTGATCGAAAAAAGT+TGG + chr3_1:2682972-2682991 None:intergenic 30.0%
!!! AACTTTTTTCGATCAGGTAA+AGG - chr3_1:2682971-2682990 Msa0344110:CDS 30.0%
!! TCTGTTGCATCATTTTTGTT+AGG - chr3_1:2683048-2683067 Msa0344110:CDS 30.0%
!! CTGTTGCATCATTTTTGTTA+GGG - chr3_1:2683049-2683068 Msa0344110:CDS 30.0%
!! TGTTGCATCATTTTTGTTAG+GGG - chr3_1:2683050-2683069 Msa0344110:CDS 30.0%
TGTTTCTCTACTAAAGCAAA+TGG - chr3_1:2683112-2683131 Msa0344110:CDS 30.0%
TAGAATTTCTGCACATAACT+TGG + chr3_1:2683165-2683184 None:intergenic 30.0%
TTCAATATTGAGCATACCAT+CGG + chr3_1:2683198-2683217 None:intergenic 30.0%
ATAACATTAACTGTGGTATC+AGG - chr3_1:2683349-2683368 Msa0344110:CDS 30.0%
! CAGGATACTTTTCAAATTCT+TGG - chr3_1:2683368-2683387 Msa0344110:CDS 30.0%
AAATGGATCTTCAACTAGAA+AGG - chr3_1:2683463-2683482 Msa0344110:CDS 30.0%
! GAATGAGATTGATGACATAT+TGG - chr3_1:2683628-2683647 Msa0344110:CDS 30.0%
!!! GATTGATTTGCAACTGATTT+TGG + chr3_1:2683752-2683771 None:intergenic 30.0%
ACAAACACATGAACAAAATG+AGG - chr3_1:2683808-2683827 Msa0344110:CDS 30.0%
! AGCAATTTTTGAATCACTTG+GGG + chr3_1:2683846-2683865 None:intergenic 30.0%
! GAAGCAATTTTTGAATCACT+TGG + chr3_1:2683848-2683867 None:intergenic 30.0%
ATTCAAAAATTGCTTCAGCA+AGG - chr3_1:2683852-2683871 Msa0344110:CDS 30.0%
TTCAAAAATTGCTTCAGCAA+GGG - chr3_1:2683853-2683872 Msa0344110:CDS 30.0%
AATTTCCTTTAGCAAAGAAC+GGG + chr3_1:2683903-2683922 None:intergenic 30.0%
TGCTAAAGGAAATTAACAAG+GGG - chr3_1:2683909-2683928 Msa0344110:CDS 30.0%
!!! GTTTTAGTTTTCCTTCTTCT+AGG - chr3_1:2684087-2684106 Msa0344110:CDS 30.0%
!!! TGTTTTAACTTTCCCAAAGC+GGG - chr3_1:2677576-2677595 Msa0344110:three_prime_UTR 35.0%
! TGAATTTTTGTTCCCGCTTT+GGG + chr3_1:2677591-2677610 None:intergenic 35.0%
! TTGAATTTTTGTTCCCGCTT+TGG + chr3_1:2677592-2677611 None:intergenic 35.0%
! GAGCGTTGTTATTAGGATTT+GGG + chr3_1:2678032-2678051 None:intergenic 35.0%
! TGAGCGTTGTTATTAGGATT+TGG + chr3_1:2678033-2678052 None:intergenic 35.0%
TGTACAGAATTTGGCGAATT+AGG + chr3_1:2678120-2678139 None:intergenic 35.0%
!! CTGTACAGAAAGTTGATGTT+AGG - chr3_1:2678133-2678152 Msa0344110:CDS 35.0%
ATCAACGATTTCAAACTCTC+GGG + chr3_1:2678222-2678241 None:intergenic 35.0%
TGCGATTGAATTGTGTAATG+AGG - chr3_1:2678269-2678288 Msa0344110:CDS 35.0%
TTGTGTAATGAGGTTCAGTA+TGG - chr3_1:2678279-2678298 Msa0344110:CDS 35.0%
!! GGTTAATTTTCCGAGGTATT+TGG - chr3_1:2678497-2678516 Msa0344110:CDS 35.0%
!! GTTGGCAGTGGATTTTATAA+TGG - chr3_1:2678554-2678573 Msa0344110:intron 35.0%
GAATCTTGTGACATTGTTGA+AGG - chr3_1:2678686-2678705 Msa0344110:CDS 35.0%
ACATTGTTGAAGGATCCTTT+AGG - chr3_1:2678696-2678715 Msa0344110:CDS 35.0%
CATTGTTGAAGGATCCTTTA+GGG - chr3_1:2678697-2678716 Msa0344110:CDS 35.0%
ATTGTTGAAGGATCCTTTAG+GGG - chr3_1:2678698-2678717 Msa0344110:CDS 35.0%
!!! TTTTGGTGATGGAAATGATG+CGG - chr3_1:2678905-2678924 Msa0344110:intron 35.0%
ACGAATGCTAAGAAGTGAAT+CGG + chr3_1:2679090-2679109 None:intergenic 35.0%
!! AAAGGGTAACAAAAGTACCT+CGG + chr3_1:2679135-2679154 None:intergenic 35.0%
!! TTTTGTTGTGCAGTGTTTTG+TGG - chr3_1:2679166-2679185 Msa0344110:CDS 35.0%
GGCATTCTTTGGTTATTTAG+TGG - chr3_1:2679404-2679423 Msa0344110:intron 35.0%
!!! TGGATTTTGGTTTACTAGTG+GGG - chr3_1:2679793-2679812 Msa0344110:CDS 35.0%
GAAAAAGAACAGGACTTTCA+GGG + chr3_1:2679867-2679886 None:intergenic 35.0%
! TCCTGTTCTTTTTCCTTTCT+TGG - chr3_1:2679873-2679892 Msa0344110:intron 35.0%
ACCAAGAAAGGAAAAAGAAC+AGG + chr3_1:2679877-2679896 None:intergenic 35.0%
TCATTATCAGCTATTTGACG+AGG + chr3_1:2680009-2680028 None:intergenic 35.0%
ACAAGTTCTCACATTCTTCT+TGG + chr3_1:2680041-2680060 None:intergenic 35.0%
GAAAGGTTTAGACAACGAAA+TGG - chr3_1:2680149-2680168 Msa0344110:CDS 35.0%
AAGGAGATACAGAATTCCTT+GGG + chr3_1:2680187-2680206 None:intergenic 35.0%
TAAGGAGATACAGAATTCCT+TGG + chr3_1:2680188-2680207 None:intergenic 35.0%
TCCTTAGAGAGATTTGCAAT+GGG - chr3_1:2680202-2680221 Msa0344110:CDS 35.0%
!!! GTGCAAATTTTTTTCACCCA+AGG + chr3_1:2680237-2680256 None:intergenic 35.0%
!!! ACTTTTCTATTGGCTTGCTA+TGG + chr3_1:2680347-2680366 None:intergenic 35.0%
ATAGCAAGCCAATAGAAAAG+TGG - chr3_1:2680346-2680365 Msa0344110:CDS 35.0%
AGTATTTCTTCCAAAAGCAG+TGG - chr3_1:2680410-2680429 Msa0344110:CDS 35.0%
GGGAATTTCTTCATCATCAT+TGG - chr3_1:2680436-2680455 Msa0344110:intron 35.0%
CTTGACAAGCATAAAGTGAA+AGG - chr3_1:2680465-2680484 Msa0344110:intron 35.0%
TAGAATGCAATAATGTTGCC+TGG - chr3_1:2680541-2680560 Msa0344110:intron 35.0%
AGAATGCAATAATGTTGCCT+GGG - chr3_1:2680542-2680561 Msa0344110:intron 35.0%
TTGTTTGCAAGAGGAATACT+CGG + chr3_1:2680575-2680594 None:intergenic 35.0%
CATTAGAGATTGTTTGCAAG+AGG + chr3_1:2680584-2680603 None:intergenic 35.0%
AGATTAAGAAGTCCAGTGTT+AGG + chr3_1:2680746-2680765 None:intergenic 35.0%
TTACACATACATGCCATCAA+GGG + chr3_1:2680789-2680808 None:intergenic 35.0%
ATTACACATACATGCCATCA+AGG + chr3_1:2680790-2680809 None:intergenic 35.0%
AGTTCATAAACTACGTTCTC+CGG - chr3_1:2680865-2680884 Msa0344110:intron 35.0%
TCAAATGCAACAGAAACATC+CGG + chr3_1:2680887-2680906 None:intergenic 35.0%
ATTGCGACAATTATTATGGG+AGG - chr3_1:2681096-2681115 Msa0344110:intron 35.0%
AAATTCCAAGGACTTGTAGA+AGG + chr3_1:2681150-2681169 None:intergenic 35.0%
CAGATGGAGAAAAAATTCCA+AGG + chr3_1:2681162-2681181 None:intergenic 35.0%
ATGAAAGCTTAAGCATCAGA+TGG + chr3_1:2681178-2681197 None:intergenic 35.0%
! GTGATGATAGTGTGCAATAA+TGG + chr3_1:2681790-2681809 None:intergenic 35.0%
CTATATTCCTCTGTTTGTAC+AGG - chr3_1:2681948-2681967 Msa0344110:CDS 35.0%
!!! GACTGATTTTTTATGCCTCA+AGG - chr3_1:2681981-2682000 Msa0344110:intron 35.0%
!!! ATTTTTTATGCCTCAAGGAC+TGG - chr3_1:2681986-2682005 Msa0344110:intron 35.0%
ATAACATATACCAGTCCTTG+AGG + chr3_1:2681999-2682018 None:intergenic 35.0%
!!! TTGTTTTGGGATACAATTGC+AGG - chr3_1:2682043-2682062 Msa0344110:intron 35.0%
AGCTCTTCGCAATAATATTG+TGG - chr3_1:2682088-2682107 Msa0344110:intron 35.0%
TGTGATCTTGGTTATGTAAC+TGG + chr3_1:2682387-2682406 None:intergenic 35.0%
GTTACATAACCAAGATCACA+CGG - chr3_1:2682387-2682406 Msa0344110:intron 35.0%
AGAAACAGTGTAGTCATAGA+AGG + chr3_1:2682495-2682514 None:intergenic 35.0%
! GATCAATACAAGAAGCATAG+AGG + chr3_1:2682561-2682580 None:intergenic 35.0%
! CAGTTAGCAGATTTTCTCTT+TGG - chr3_1:2682731-2682750 Msa0344110:intron 35.0%
! AAAGGTTTGAAGCTTTACCT+CGG - chr3_1:2682764-2682783 Msa0344110:intron 35.0%
!!! TGTTTTTTTGTCACCAGTCA+AGG - chr3_1:2682843-2682862 Msa0344110:CDS 35.0%
!!! AAAGCCAACTTTTTTCGATC+AGG - chr3_1:2682965-2682984 Msa0344110:CDS 35.0%
CTCAATATTGAAGATGCAAC+TGG - chr3_1:2683206-2683225 Msa0344110:CDS 35.0%
! GTATTGATCTTTACCAGCAA+TGG - chr3_1:2683245-2683264 Msa0344110:CDS 35.0%
TGTGTGTATTCACAATAGTG+CGG + chr3_1:2683283-2683302 None:intergenic 35.0%
AACTAGAAAGGCTATAACTC+AGG - chr3_1:2683475-2683494 Msa0344110:CDS 35.0%
!! TGGGTATAGTGTTTTGAATG+AGG + chr3_1:2683514-2683533 None:intergenic 35.0%
CGTTTCAACTCTATGAAGAT+GGG + chr3_1:2683533-2683552 None:intergenic 35.0%
ACGTTTCAACTCTATGAAGA+TGG + chr3_1:2683534-2683553 None:intergenic 35.0%
CATAGAGTTGAAACGTCTAT+TGG - chr3_1:2683538-2683557 Msa0344110:CDS 35.0%
!!! ATTTGCAACTGATTTTGGCT+TGG + chr3_1:2683747-2683766 None:intergenic 35.0%
ACGTTCAAAGAACTAAGTTG+TGG + chr3_1:2683944-2683963 None:intergenic 35.0%
AATATATCCATGCGTTCACA+AGG - chr3_1:2684250-2684269 Msa0344110:five_prime_UTR 35.0%
ATATATCCATGCGTTCACAA+GGG - chr3_1:2684251-2684270 Msa0344110:five_prime_UTR 35.0%
AGGAGTGAAGAGAGTGAAAA+CGG + chr3_1:2677956-2677975 None:intergenic 40.0%
!! TAGTGTTTTTGAAAGCGCGA+CGG + chr3_1:2678008-2678027 None:intergenic 40.0%
! ATCTGCTGAGCGTTGTTATT+AGG + chr3_1:2678039-2678058 None:intergenic 40.0%
ATAACAACGCTCAGCAGATT+CGG - chr3_1:2678040-2678059 Msa0344110:CDS 40.0%
CACAATTCAATCGCAGTCAA+CGG + chr3_1:2678264-2678283 None:intergenic 40.0%
TGAGGTTCAGTATGGTAGAT+TGG - chr3_1:2678287-2678306 Msa0344110:CDS 40.0%
GTTCAGTATGGTAGATTGGT+TGG - chr3_1:2678291-2678310 Msa0344110:CDS 40.0%
GACTTCGGCATTACAACAAA+AGG + chr3_1:2678405-2678424 None:intergenic 40.0%
AGTTTGAGTAGGGATTCAGA+TGG - chr3_1:2678459-2678478 Msa0344110:CDS 40.0%
!!! AAGCGTTGGTTAATTTTCCG+AGG - chr3_1:2678490-2678509 Msa0344110:CDS 40.0%
! TCCGAGGTATTTGGCAAATA+AGG - chr3_1:2678506-2678525 Msa0344110:CDS 40.0%
!! GCCTTATTTGCCAAATACCT+CGG + chr3_1:2678510-2678529 None:intergenic 40.0%
GTATTTGGCAAATAAGGCAC+CGG - chr3_1:2678512-2678531 Msa0344110:CDS 40.0%
!! GGCAGTGGATTTTATAATGG+AGG - chr3_1:2678557-2678576 Msa0344110:intron 40.0%
AATGGAGGTTGTTAGGGTTA+TGG - chr3_1:2678572-2678591 Msa0344110:intron 40.0%
GTTGTTAGGGTTATGGAAGT+GGG - chr3_1:2678579-2678598 Msa0344110:intron 40.0%
TTGTTAGGGTTATGGAAGTG+GGG - chr3_1:2678580-2678599 Msa0344110:intron 40.0%
ATGTTAGTGCTACGATTCGA+GGG - chr3_1:2678799-2678818 Msa0344110:CDS 40.0%
! CAGGTTGTTGGGTTTTTATC+AGG - chr3_1:2678843-2678862 Msa0344110:intron 40.0%
!! GAGTTTATGGGTTTTGGTGA+TGG - chr3_1:2678894-2678913 Msa0344110:intron 40.0%
!! TTTGGTGATGGAAATGATGC+GGG - chr3_1:2678906-2678925 Msa0344110:intron 40.0%
AGGGAATCAATGAGATGCTT+AGG - chr3_1:2678940-2678959 Msa0344110:CDS 40.0%
TCAATGAGATGCTTAGGAGA+AGG - chr3_1:2678946-2678965 Msa0344110:CDS 40.0%
ACTAACTTGACTGCTCTACT+TGG - chr3_1:2679017-2679036 Msa0344110:CDS 40.0%
GGAACTAGTGAGATTCAAGA+TGG + chr3_1:2679846-2679865 None:intergenic 40.0%
GGAAAAAGAACAGGACTTTC+AGG + chr3_1:2679868-2679887 None:intergenic 40.0%
!! CAGCTGCAGTTCTAGATATT+CGG + chr3_1:2680083-2680102 None:intergenic 40.0%
AGGTTCGATATATGAAGAGG+TGG + chr3_1:2680106-2680125 None:intergenic 40.0%
AGGAGATACAGAATTCCTTG+GGG + chr3_1:2680186-2680205 None:intergenic 40.0%
CTCCTTAGAGAGATTTGCAA+TGG - chr3_1:2680201-2680220 Msa0344110:CDS 40.0%
CCTTAGAGAGATTTGCAATG+GGG - chr3_1:2680203-2680222 Msa0344110:CDS 40.0%
CAAACCTGGGCAAAAAGAAA+CGG - chr3_1:2680256-2680275 Msa0344110:CDS 40.0%
! CGCTTGGTTTCTTTTATCAG+AGG - chr3_1:2680383-2680402 Msa0344110:CDS 40.0%
!! TGGCTCATAACTTGCTCAAA+CGG - chr3_1:2680640-2680659 Msa0344110:intron 40.0%
ATTCAACATGCATGCAACAG+AGG - chr3_1:2680671-2680690 Msa0344110:intron 40.0%
AAGGGAGCCATTCAAGAATA+AGG + chr3_1:2680771-2680790 None:intergenic 40.0%
TCTATCCTTCTACAAGTCCT+TGG - chr3_1:2681142-2681161 Msa0344110:intron 40.0%
!!! GAATTGCTACTTTTGCTGAC+AGG - chr3_1:2681453-2681472 Msa0344110:CDS 40.0%
AAAGCGCAAGTCATTGTCAA+AGG - chr3_1:2681693-2681712 Msa0344110:CDS 40.0%
TAGCACTCATATCAGCAGAT+GGG + chr3_1:2681762-2681781 None:intergenic 40.0%
ATAGCACTCATATCAGCAGA+TGG + chr3_1:2681763-2681782 None:intergenic 40.0%
ATTCCTCTGTTTGTACAGGT+TGG - chr3_1:2681952-2681971 Msa0344110:intron 40.0%
ACAATTGCAGGAGCTTGAAA+AGG - chr3_1:2682055-2682074 Msa0344110:intron 40.0%
! CAATGGCAGACTTTTGTGTT+CGG - chr3_1:2682114-2682133 Msa0344110:intron 40.0%
GGTACACTGCTCTTATTGAT+TGG - chr3_1:2682135-2682154 Msa0344110:intron 40.0%
ATCCTTGTGAACTTGTGAGA+AGG - chr3_1:2682420-2682439 Msa0344110:intron 40.0%
CGAGTATGGACATCAGTTAA+AGG + chr3_1:2682536-2682555 None:intergenic 40.0%
AGGTGTCCCAAATTAGCATT+TGG - chr3_1:2682991-2683010 Msa0344110:CDS 40.0%
AAAGGTTGCTAGAAGATGCT+CGG + chr3_1:2683141-2683160 None:intergenic 40.0%
TTCTGCACATAACTTGGCAA+AGG + chr3_1:2683159-2683178 None:intergenic 40.0%
! GAAAACTTGATGACCATTGC+TGG + chr3_1:2683261-2683280 None:intergenic 40.0%
TATAACTCAGGCAGTCAAGA+AGG - chr3_1:2683487-2683506 Msa0344110:CDS 40.0%
ATAACTCAGGCAGTCAAGAA+GGG - chr3_1:2683488-2683507 Msa0344110:CDS 40.0%
TTCCATGAGAGAACCTATGA+GGG + chr3_1:2683579-2683598 None:intergenic 40.0%
ATTCCATGAGAGAACCTATG+AGG + chr3_1:2683580-2683599 None:intergenic 40.0%
CATTCTTGTAGTCCTTGAGA+AGG + chr3_1:2683613-2683632 None:intergenic 40.0%
ACCTGATGTTGCTAAGAATC+TGG - chr3_1:2683772-2683791 Msa0344110:CDS 40.0%
TGTTGCTAAGAATCTGGCAA+AGG - chr3_1:2683778-2683797 Msa0344110:CDS 40.0%
ACAAAATGAGGACAGTGACA+AGG - chr3_1:2683820-2683839 Msa0344110:CDS 40.0%
CCAGTGAAAGACTTGACTTT+GGG + chr3_1:2683968-2683987 None:intergenic 40.0%
ACCAGTGAAAGACTTGACTT+TGG + chr3_1:2683969-2683988 None:intergenic 40.0%
AAAGTCAAGTCTTTCACTGG+TGG - chr3_1:2683968-2683987 Msa0344110:CDS 40.0%
! TCCAAATGACAGCTCTTTTC+AGG - chr3_1:2684121-2684140 Msa0344110:CDS 40.0%
! CATTGTTGCTTAACGCTGAT+CGG - chr3_1:2684173-2684192 Msa0344110:CDS 40.0%
AGCAATTCAAAGATGCATGC+TGG + chr3_1:2684301-2684320 None:intergenic 40.0%
AAATCTCGTTCTGCACAGAC+CGG - chr3_1:2677643-2677662 Msa0344110:three_prime_UTR 45.0%
GGAGATTTCTGTTACGATGC+GGG + chr3_1:2677704-2677723 None:intergenic 45.0%
CGGAGATTTCTGTTACGATG+CGG + chr3_1:2677705-2677724 None:intergenic 45.0%
!! TTGTGGATTTTCGGTGTGGT+GGG + chr3_1:2677740-2677759 None:intergenic 45.0%
! GGAGAGTGGTTGTGGATTTT+CGG + chr3_1:2677749-2677768 None:intergenic 45.0%
GAGAGAAGAGAGGGATTGTT+CGG + chr3_1:2677770-2677789 None:intergenic 45.0%
GATTAGGTGGGAAGGTGAAA+CGG + chr3_1:2677839-2677858 None:intergenic 45.0%
AGTGAAGAGAGTGAAAACGG+GGG + chr3_1:2677953-2677972 None:intergenic 45.0%
GAGTGAAGAGAGTGAAAACG+GGG + chr3_1:2677954-2677973 None:intergenic 45.0%
GGAGTGAAGAGAGTGAAAAC+GGG + chr3_1:2677955-2677974 None:intergenic 45.0%
!!! AGGTTTTGAAACCGGAGCAT+GGG - chr3_1:2678337-2678356 Msa0344110:CDS 45.0%
!! GACAGCTGCTGAGGTTTTAA+AGG - chr3_1:2678371-2678390 Msa0344110:CDS 45.0%
TGTTGTAATGCCGAAGTCTC+AGG - chr3_1:2678407-2678426 Msa0344110:CDS 45.0%
AAACTCCTCACCTGAGACTT+CGG + chr3_1:2678420-2678439 None:intergenic 45.0%
GGTTGTTAGGGTTATGGAAG+TGG - chr3_1:2678578-2678597 Msa0344110:intron 45.0%
TGTTAGGGTTATGGAAGTGG+GGG - chr3_1:2678581-2678600 Msa0344110:intron 45.0%
! TCCTTTAGGGGTGAATTCGA+CGG - chr3_1:2678710-2678729 Msa0344110:CDS 45.0%
AATTCGACGGATGAGGAAGA+AGG - chr3_1:2678723-2678742 Msa0344110:CDS 45.0%
ATTCGACGGATGAGGAAGAA+GGG - chr3_1:2678724-2678743 Msa0344110:CDS 45.0%
GATGTTAGTGCTACGATTCG+AGG - chr3_1:2678798-2678817 Msa0344110:CDS 45.0%
AGGTAGTGAAAAGGCTAGTG+TGG - chr3_1:2678863-2678882 Msa0344110:intron 45.0%
AACTTGACTGCTCTACTTGG+AGG - chr3_1:2679020-2679039 Msa0344110:CDS 45.0%
!! TGGAGGTGCTATTGATGAAG+TGG - chr3_1:2679037-2679056 Msa0344110:CDS 45.0%
! TGAAGTGGTGCTGAAGACAA+TGG - chr3_1:2679052-2679071 Msa0344110:intron 45.0%
! GAAGTGGTGCTGAAGACAAT+GGG - chr3_1:2679053-2679072 Msa0344110:intron 45.0%
!! CAAAAGTACCTCGGAAAGAG+AGG + chr3_1:2679126-2679145 None:intergenic 45.0%
! TTGTGCAGTGTTTTGTGGAG+AGG - chr3_1:2679171-2679190 Msa0344110:CDS 45.0%
AGTGTTTGGTTAAGAGGGGA+AGG - chr3_1:2679735-2679754 Msa0344110:intron 45.0%
TTGGTTTACTAGTGGGGTTG+AGG - chr3_1:2679799-2679818 Msa0344110:CDS 45.0%
CAGAACATTCTCAGCCGAAA+CGG - chr3_1:2679957-2679976 Msa0344110:CDS 45.0%
AGGAACTGAATGTAGCCACT+CGG + chr3_1:2679989-2680008 None:intergenic 45.0%
GGCAGGTTCGATATATGAAG+AGG + chr3_1:2680109-2680128 None:intergenic 45.0%
GGAGATACAGAATTCCTTGG+GGG + chr3_1:2680185-2680204 None:intergenic 45.0%
CCCCATTGCAAATCTCTCTA+AGG + chr3_1:2680206-2680225 None:intergenic 45.0%
TAGAGAGATTTGCAATGGGG+AGG - chr3_1:2680206-2680225 Msa0344110:CDS 45.0%
! TCAACCGTTTCTTTTTGCCC+AGG + chr3_1:2680263-2680282 None:intergenic 45.0%
AAAGAAACCAAGCGCCTTGT+GGG + chr3_1:2680377-2680396 None:intergenic 45.0%
AAAAGAAACCAAGCGCCTTG+TGG + chr3_1:2680378-2680397 None:intergenic 45.0%
TTCTTCCAAAAGCAGTGGAC+TGG - chr3_1:2680415-2680434 Msa0344110:CDS 45.0%
! TCTTCCAAAAGCAGTGGACT+GGG - chr3_1:2680416-2680435 Msa0344110:CDS 45.0%
! AATTCCCAGTCCACTGCTTT+TGG + chr3_1:2680423-2680442 None:intergenic 45.0%
AAATCAGCAGCAGGATCAGT+TGG + chr3_1:2680621-2680640 None:intergenic 45.0%
! AACTGATCCTGCTGCTGATT+TGG - chr3_1:2680620-2680639 Msa0344110:intron 45.0%
TTATGAGCCAAATCAGCAGC+AGG + chr3_1:2680630-2680649 None:intergenic 45.0%
!! GGCTCATAACTTGCTCAAAC+GGG - chr3_1:2680641-2680660 Msa0344110:intron 45.0%
TTCTTGAATGGCTCCCTTGA+TGG - chr3_1:2680773-2680792 Msa0344110:intron 45.0%
CGACAATTATTATGGGAGGC+AGG - chr3_1:2681100-2681119 Msa0344110:intron 45.0%
ATTCACACACACCCTTCATG+CGG - chr3_1:2681201-2681220 Msa0344110:intron 45.0%
CTTCTTTGTTGCCGCATGAA+GGG + chr3_1:2681215-2681234 None:intergenic 45.0%
TCTTCTTTGTTGCCGCATGA+AGG + chr3_1:2681216-2681235 None:intergenic 45.0%
TTCTTCACTCCACCTAGAAG+TGG - chr3_1:2681643-2681662 Msa0344110:CDS 45.0%
TCTTCACTCCACCTAGAAGT+GGG - chr3_1:2681644-2681663 Msa0344110:CDS 45.0%
TTGCACACTATCATCACCTC+TGG - chr3_1:2681793-2681812 Msa0344110:CDS 45.0%
TGCACACTATCATCACCTCT+GGG - chr3_1:2681794-2681813 Msa0344110:CDS 45.0%
!! TTTTGGGTCAGAATTCCCAG+AGG + chr3_1:2681812-2681831 None:intergenic 45.0%
AGGAGATTCTTGTTGCAGAG+AGG + chr3_1:2681860-2681879 None:intergenic 45.0%
GCAAACTTTGCCTTGCTGAT+GGG - chr3_1:2681911-2681930 Msa0344110:CDS 45.0%
AGACCAACCTGTACAAACAG+AGG + chr3_1:2681958-2681977 None:intergenic 45.0%
TAAGAGACACCGTGTGATCT+TGG + chr3_1:2682399-2682418 None:intergenic 45.0%
TGCCTTCTCACAAGTTCACA+AGG + chr3_1:2682425-2682444 None:intergenic 45.0%
ATTGCTATCGAGACTGTTGC+AGG - chr3_1:2682454-2682473 Msa0344110:intron 45.0%
CCATTTCACGTAATCCCTCT+AGG + chr3_1:2682651-2682670 None:intergenic 45.0%
CCTAGAGGGATTACGTGAAA+TGG - chr3_1:2682648-2682667 Msa0344110:intron 45.0%
AGGGATTACGTGAAATGGAG+AGG - chr3_1:2682653-2682672 Msa0344110:intron 45.0%
AACAGCAAGTAGAACTACCG+AGG + chr3_1:2682784-2682803 None:intergenic 45.0%
GGACTCACGATGTCCATTAT+GGG + chr3_1:2682929-2682948 None:intergenic 45.0%
TGGACTCACGATGTCCATTA+TGG + chr3_1:2682930-2682949 None:intergenic 45.0%
TGAGTCCAACGAATCACGAA+CGG - chr3_1:2682942-2682961 Msa0344110:CDS 45.0%
!! GGGGTGCTGATGAAAAATCA+AGG - chr3_1:2683069-2683088 Msa0344110:CDS 45.0%
AAGGTTGCTAGAAGATGCTC+GGG + chr3_1:2683140-2683159 None:intergenic 45.0%
AACTGGACAGTCTGTTCTAC+AGG - chr3_1:2683223-2683242 Msa0344110:CDS 45.0%
TCGGCAGACTTAGAAGAAGA+AGG - chr3_1:2683434-2683453 Msa0344110:CDS 45.0%
CGGCAGACTTAGAAGAAGAA+GGG - chr3_1:2683435-2683454 Msa0344110:CDS 45.0%
GGCAGACTTAGAAGAAGAAG+GGG - chr3_1:2683436-2683455 Msa0344110:CDS 45.0%
GCAGACTTAGAAGAAGAAGG+GGG - chr3_1:2683437-2683456 Msa0344110:CDS 45.0%
GAAGAAGAAGGGGGAGAAAA+TGG - chr3_1:2683446-2683465 Msa0344110:CDS 45.0%
TCCATGAGAGAACCTATGAG+GGG + chr3_1:2683578-2683597 None:intergenic 45.0%
GTTCTCTCATGGAATGCCTT+CGG - chr3_1:2683585-2683604 Msa0344110:CDS 45.0%
TTCTCTCATGGAATGCCTTC+GGG - chr3_1:2683586-2683605 Msa0344110:CDS 45.0%
AGCTAAAGCAACAGTTGCTG+AGG - chr3_1:2683712-2683731 Msa0344110:CDS 45.0%
!!! TGCAACTGATTTTGGCTTGG+AGG + chr3_1:2683744-2683763 None:intergenic 45.0%
GCCAGATTCTTAGCAACATC+AGG + chr3_1:2683776-2683795 None:intergenic 45.0%
AACAGCCCGTTCTTTGCTAA+AGG - chr3_1:2683895-2683914 Msa0344110:CDS 45.0%
CCCAAAGTCAAGTCTTTCAC+TGG - chr3_1:2683965-2683984 Msa0344110:CDS 45.0%
ATCTAGAGGTGATAAGCGCT+TGG - chr3_1:2683997-2684016 Msa0344110:CDS 45.0%
! AGCTGTCATTTGGACTCTAG+AGG + chr3_1:2684115-2684134 None:intergenic 45.0%
GCCTGAAAAGAGCTGTCATT+TGG + chr3_1:2684125-2684144 None:intergenic 45.0%
AGTGTTTCGTCGTCCATCTC+CGG + chr3_1:2677679-2677698 None:intergenic 50.0%
!! GTTGTGGATTTTCGGTGTGG+TGG + chr3_1:2677741-2677760 None:intergenic 50.0%
! GTGGTTGTGGATTTTCGGTG+TGG + chr3_1:2677744-2677763 None:intergenic 50.0%
GATTGTTCGGAGAGTGGTTG+TGG + chr3_1:2677757-2677776 None:intergenic 50.0%
GAGGGTTTGGAGAGAAGAGA+GGG + chr3_1:2677779-2677798 None:intergenic 50.0%
CTAAGGGTTGGGAATGGTTG+AGG + chr3_1:2677801-2677820 None:intergenic 50.0%
GTAGAGTGGGTCTAAGGGTT+GGG + chr3_1:2677812-2677831 None:intergenic 50.0%
ATTGGAGGGATTAGGTGGGA+AGG + chr3_1:2677847-2677866 None:intergenic 50.0%
TGGTGGAGATGAGTCCATTG+CGG + chr3_1:2677875-2677894 None:intergenic 50.0%
TTGGAGAGAGGAGGAAAGAG+AGG + chr3_1:2677927-2677946 None:intergenic 50.0%
AGGAAGGAGAGAAAGGAGAG+AGG + chr3_1:2677976-2677995 None:intergenic 50.0%
!! GTTTTTGAAAGCGCGACGGA+GGG + chr3_1:2678004-2678023 None:intergenic 50.0%
!! TGTTTTTGAAAGCGCGACGG+AGG + chr3_1:2678005-2678024 None:intergenic 50.0%
!!! GAGGTTTTGAAACCGGAGCA+TGG - chr3_1:2678336-2678355 Msa0344110:CDS 50.0%
!!! GGTTTTGAAACCGGAGCATG+GGG - chr3_1:2678338-2678357 Msa0344110:CDS 50.0%
TAATGCCGAAGTCTCAGGTG+AGG - chr3_1:2678412-2678431 Msa0344110:CDS 50.0%
!! CAGGTGAGGAGTTTTGCTGT+TGG - chr3_1:2678426-2678445 Msa0344110:CDS 50.0%
GTAGGGATTCAGATGGTGTG+AGG - chr3_1:2678466-2678485 Msa0344110:CDS 50.0%
! AGATGGTGTGAGGAAAGCGT+TGG - chr3_1:2678476-2678495 Msa0344110:CDS 50.0%
TCCGTCGAATTCACCCCTAA+AGG + chr3_1:2678714-2678733 None:intergenic 50.0%
GGATGAGGAAGAAGGGAATG+TGG - chr3_1:2678731-2678750 Msa0344110:CDS 50.0%
!! GATTTGGTGTTTGGATGCGC+TGG - chr3_1:2678761-2678780 Msa0344110:CDS 50.0%
GATGGAAATGATGCGGGTGT+CGG - chr3_1:2678912-2678931 Msa0344110:intron 50.0%
! GATGCTTAGGAGAAGGTGTG+TGG - chr3_1:2678953-2678972 Msa0344110:CDS 50.0%
! GAGAAGGTGTGTGGATGAGA+AGG - chr3_1:2678962-2678981 Msa0344110:CDS 50.0%
AAGGTGTGTGGATGAGAAGG+CGG - chr3_1:2678965-2678984 Msa0344110:CDS 50.0%
! GGTGCTGAAGACAATGGGAA+TGG - chr3_1:2679058-2679077 Msa0344110:intron 50.0%
CCACTCGGTTGTTACCGTTT+CGG + chr3_1:2679974-2679993 None:intergenic 50.0%
TACAGAATTCCTTGGGGGAC+AGG + chr3_1:2680180-2680199 None:intergenic 50.0%
! TTAAGGTGTCCGAGTCCATC+TGG - chr3_1:2680316-2680335 Msa0344110:CDS 50.0%
! ATGGTTCAGCCAGATGGACT+CGG + chr3_1:2680328-2680347 None:intergenic 50.0%
! CTTGCTATGGTTCAGCCAGA+TGG + chr3_1:2680334-2680353 None:intergenic 50.0%
!! GGGGCAGTCCACTTTTCTAT+TGG + chr3_1:2680357-2680376 None:intergenic 50.0%
AAGAAACCAAGCGCCTTGTG+GGG + chr3_1:2680376-2680395 None:intergenic 50.0%
TTACTTGGCCCACTTCTAGG+TGG + chr3_1:2681655-2681674 None:intergenic 50.0%
CCTTTACTTGGCCCACTTCT+AGG + chr3_1:2681658-2681677 None:intergenic 50.0%
CCTAGAAGTGGGCCAAGTAA+AGG - chr3_1:2681655-2681674 Msa0344110:CDS 50.0%
GAAGTGGGCCAAGTAAAGGT+CGG - chr3_1:2681659-2681678 Msa0344110:CDS 50.0%
CCTGACTTCCGACCTTTACT+TGG + chr3_1:2681670-2681689 None:intergenic 50.0%
CCAAGTAAAGGTCGGAAGTC+AGG - chr3_1:2681667-2681686 Msa0344110:CDS 50.0%
CTTGTTGCAGAGAGGTTGCA+GGG + chr3_1:2681852-2681871 None:intergenic 50.0%
TCTTGTTGCAGAGAGGTTGC+AGG + chr3_1:2681853-2681872 None:intergenic 50.0%
TATTCAAGGGTGGCTGACCA+TGG - chr3_1:2681888-2681907 Msa0344110:CDS 50.0%
ATTCAAGGGTGGCTGACCAT+GGG - chr3_1:2681889-2681908 Msa0344110:CDS 50.0%
AGCAAGGCAAAGTTTGCCCA+TGG + chr3_1:2681908-2681927 None:intergenic 50.0%
GGCAAACTTTGCCTTGCTGA+TGG - chr3_1:2681910-2681929 Msa0344110:CDS 50.0%
TTGCAAGCTTCCCATCAGCA+AGG + chr3_1:2681924-2681943 None:intergenic 50.0%
GAAGCATAGAGGGACGAGTA+TGG + chr3_1:2682550-2682569 None:intergenic 50.0%
TATTGATCCAAAACCCGCGC+TGG - chr3_1:2682573-2682592 Msa0344110:intron 50.0%
ATTGATCCAAAACCCGCGCT+GGG - chr3_1:2682574-2682593 Msa0344110:intron 50.0%
TTATTCTCTCAACCCCAGCG+CGG + chr3_1:2682590-2682609 None:intergenic 50.0%
GCTAAAAGAGGAGCCTTGAC+TGG + chr3_1:2682859-2682878 None:intergenic 50.0%
AATGACTGCCGTGCCCATAA+TGG - chr3_1:2682913-2682932 Msa0344110:CDS 50.0%
CACGATGTCCATTATGGGCA+CGG + chr3_1:2682924-2682943 None:intergenic 50.0%
GCTTTCCGTTCGTGATTCGT+TGG + chr3_1:2682950-2682969 None:intergenic 50.0%
! ATTCTAGCTGCAGCTTCCGA+TGG - chr3_1:2683179-2683198 Msa0344110:CDS 50.0%
ACCAAGAACAGTCCCCTCAT+AGG - chr3_1:2683563-2683582 Msa0344110:CDS 50.0%
ACCTATGAGGGGACTGTTCT+TGG + chr3_1:2683567-2683586 None:intergenic 50.0%
TCCCCTCATAGGTTCTCTCA+TGG - chr3_1:2683574-2683593 Msa0344110:CDS 50.0%
!! ACTGGTGGACTCGTATCTAG+AGG - chr3_1:2683983-2684002 Msa0344110:CDS 50.0%
!! CTCTAGAGGCACCTAGAAGA+AGG + chr3_1:2684101-2684120 None:intergenic 50.0%
ATCCATGCGTTCACAAGGGT+CGG - chr3_1:2684255-2684274 Msa0344110:five_prime_UTR 50.0%
!! TTTCGGTGTGGTGGGTTTCG+CGG + chr3_1:2677732-2677751 None:intergenic 55.0%
GAGAGGGATTGTTCGGAGAG+TGG + chr3_1:2677763-2677782 None:intergenic 55.0%
GGAGGGTTTGGAGAGAAGAG+AGG + chr3_1:2677780-2677799 None:intergenic 55.0%
GGGAATGGTTGAGGAGGGTT+TGG + chr3_1:2677792-2677811 None:intergenic 55.0%
GGGTTGGGAATGGTTGAGGA+GGG + chr3_1:2677797-2677816 None:intergenic 55.0%
AGGGTTGGGAATGGTTGAGG+AGG + chr3_1:2677798-2677817 None:intergenic 55.0%
GTGGGTCTAAGGGTTGGGAA+TGG + chr3_1:2677807-2677826 None:intergenic 55.0%
CGTAGAGTGGGTCTAAGGGT+TGG + chr3_1:2677813-2677832 None:intergenic 55.0%
GCGTCGTAGAGTGGGTCTAA+GGG + chr3_1:2677817-2677836 None:intergenic 55.0%
GTGAAACGGCGTCGTAGAGT+GGG + chr3_1:2677825-2677844 None:intergenic 55.0%
GGCGATTGGAGGGATTAGGT+GGG + chr3_1:2677851-2677870 None:intergenic 55.0%
TGGCGATTGGAGGGATTAGG+TGG + chr3_1:2677852-2677871 None:intergenic 55.0%
TGGAGATGAGTCCATTGCGG+TGG + chr3_1:2677872-2677891 None:intergenic 55.0%
TGAGAAGCGAGGAGAGAGTG+AGG + chr3_1:2677898-2677917 None:intergenic 55.0%
AGAGGAAGACGTGAGAAGCG+AGG + chr3_1:2677909-2677928 None:intergenic 55.0%
!! AGAGTGAAAACGGGGGCGTT+TGG + chr3_1:2677946-2677965 None:intergenic 55.0%
GGAACGGAGGAAGGAGAGAA+AGG + chr3_1:2677983-2678002 None:intergenic 55.0%
ACGCTCAGCAGATTCGGAAG+CGG - chr3_1:2678046-2678065 Msa0344110:CDS 55.0%
AGCAGATTCGGAAGCGGAGA+CGG - chr3_1:2678052-2678071 Msa0344110:CDS 55.0%
! TTTGAAACCGGAGCATGGGG+AGG - chr3_1:2678341-2678360 Msa0344110:CDS 55.0%
TTCGAAACCTCCCCATGCTC+CGG + chr3_1:2678351-2678370 None:intergenic 55.0%
GGTTTCGAAGACAGCTGCTG+AGG - chr3_1:2678362-2678381 Msa0344110:CDS 55.0%
ACCGGATAAAGCTGAGCCGA+GGG - chr3_1:2678530-2678549 Msa0344110:intron 55.0%
AAATCCACTGCCAACGCCCT+CGG + chr3_1:2678549-2678568 None:intergenic 55.0%
AGGGGTGAATTCGACGGATG+AGG - chr3_1:2678716-2678735 Msa0344110:CDS 55.0%
AGGAAGAAGGGAATGTGGCG+TGG - chr3_1:2678736-2678755 Msa0344110:CDS 55.0%
GGAAGAAGGGAATGTGGCGT+GGG - chr3_1:2678737-2678756 Msa0344110:CDS 55.0%
GAAGAAGGGAATGTGGCGTG+GGG - chr3_1:2678738-2678757 Msa0344110:CDS 55.0%
AAGAAGGGAATGTGGCGTGG+GGG - chr3_1:2678739-2678758 Msa0344110:CDS 55.0%
!! TGCGCTGGTGAAGCGTTGTT+CGG - chr3_1:2678776-2678795 Msa0344110:CDS 55.0%
!! AGGGCGAGCTTTGTCGACTT+TGG - chr3_1:2678818-2678837 Msa0344110:CDS 55.0%
!! AGCTTTGTCGACTTTGGCGC+AGG - chr3_1:2678824-2678843 Msa0344110:CDS 55.0%
TCGACTTTGGCGCAGGTTGT+TGG - chr3_1:2678831-2678850 Msa0344110:intron 55.0%
CGACTTTGGCGCAGGTTGTT+GGG - chr3_1:2678832-2678851 Msa0344110:intron 55.0%
GGTTAAGAGGGGAAGGTGAG+AGG - chr3_1:2679742-2679761 Msa0344110:intron 55.0%
CCGAAACGGTAACAACCGAG+TGG - chr3_1:2679971-2679990 Msa0344110:CDS 55.0%
ATGGATATGCCTGTCCCCCA+AGG - chr3_1:2680168-2680187 Msa0344110:CDS 55.0%
CAATGGGGAGGTGAGTCCTT+GGG - chr3_1:2680218-2680237 Msa0344110:CDS 55.0%
!! GAAAAGTGGACTGCCCCACA+AGG - chr3_1:2680360-2680379 Msa0344110:CDS 55.0%
GAATACTCGGTCACTAGCCC+AGG + chr3_1:2680562-2680581 None:intergenic 55.0%
TTGATCCAAAACCCGCGCTG+GGG - chr3_1:2682575-2682594 Msa0344110:intron 55.0%
TATTCTCTCAACCCCAGCGC+GGG + chr3_1:2682589-2682608 None:intergenic 55.0%
CACTCGCGTGTCATCTGAGT+CGG - chr3_1:2683415-2683434 Msa0344110:CDS 55.0%
ATGCCTTCGGGTCCTTCTCA+AGG - chr3_1:2683598-2683617 Msa0344110:CDS 55.0%
AGTCCTTGAGAAGGACCCGA+AGG + chr3_1:2683604-2683623 None:intergenic 55.0%
TCCATGCGTTCACAAGGGTC+GGG - chr3_1:2684256-2684275 Msa0344110:five_prime_UTR 55.0%
GTTTCGTCGTCCATCTCCGG+TGG + chr3_1:2677676-2677695 None:intergenic 60.0%
GGCGTCGTAGAGTGGGTCTA+AGG + chr3_1:2677818-2677837 None:intergenic 60.0%
GGTGAAACGGCGTCGTAGAG+TGG + chr3_1:2677826-2677845 None:intergenic 60.0%
CGGTGGCGATTGGAGGGATT+AGG + chr3_1:2677855-2677874 None:intergenic 60.0%
CCATTGCGGTGGCGATTGGA+GGG + chr3_1:2677861-2677880 None:intergenic 60.0%
TCCATTGCGGTGGCGATTGG+AGG + chr3_1:2677862-2677881 None:intergenic 60.0%
GAGTCCATTGCGGTGGCGAT+TGG + chr3_1:2677865-2677884 None:intergenic 60.0%
GAAGCGAGGAGAGAGTGAGG+TGG + chr3_1:2677895-2677914 None:intergenic 60.0%
!! AAACGGGGGCGTTTGGAGAG+AGG + chr3_1:2677939-2677958 None:intergenic 60.0%
! TGAAAGCGCGACGGAGGGAA+CGG + chr3_1:2677999-2678018 None:intergenic 60.0%
CACCGGATAAAGCTGAGCCG+AGG - chr3_1:2678529-2678548 Msa0344110:CDS 60.0%
! GCCCTCGGCTCAGCTTTATC+CGG + chr3_1:2678534-2678553 None:intergenic 60.0%
! TAAAGCTGAGCCGAGGGCGT+TGG - chr3_1:2678536-2678555 Msa0344110:intron 60.0%
GGAATGTGGCGTGGGGGATT+TGG - chr3_1:2678745-2678764 Msa0344110:CDS 60.0%
!! GGCGTGGGGGATTTGGTGTT+TGG - chr3_1:2678752-2678771 Msa0344110:CDS 60.0%
!! GGAAATGATGCGGGTGTCGG+AGG - chr3_1:2678915-2678934 Msa0344110:intron 60.0%
!! TGATGCGGGTGTCGGAGGAA+AGG - chr3_1:2678920-2678939 Msa0344110:intron 60.0%
!! GATGCGGGTGTCGGAGGAAA+GGG - chr3_1:2678921-2678940 Msa0344110:intron 60.0%
AGCTGCTGCCTCTCTTTCCG+AGG - chr3_1:2679115-2679134 Msa0344110:intron 60.0%
GCAATGGGGAGGTGAGTCCT+TGG - chr3_1:2680217-2680236 Msa0344110:CDS 60.0%
CGACTCAGATGACACGCGAG+TGG + chr3_1:2683417-2683436 None:intergenic 60.0%
ATGCGTTCACAAGGGTCGGG+CGG - chr3_1:2684259-2684278 Msa0344110:five_prime_UTR 60.0%
ACAGACCGGAGTAGCGCCAC+CGG - chr3_1:2677657-2677676 Msa0344110:three_prime_UTR 65.0%
CATCTCCGGTGGCGCTACTC+CGG + chr3_1:2677665-2677684 None:intergenic 65.0%
!! GTGGTGGGTTTCGCGGAGGT+CGG + chr3_1:2677725-2677744 None:intergenic 65.0%
CCCTCCAATCGCCACCGCAA+TGG - chr3_1:2677858-2677877 Msa0344110:CDS 65.0%
GCGAGGAGAGAGTGAGGTGG+TGG + chr3_1:2677892-2677911 None:intergenic 65.0%
! CTCAACCCCAGCGCGGGTTT+TGG + chr3_1:2682583-2682602 None:intergenic 65.0%
GCCCGACCCTTGTGAACGCA+TGG + chr3_1:2684260-2684279 None:intergenic 65.0%
CGGAGTAGCGCCACCGGAGA+TGG - chr3_1:2677663-2677682 Msa0344110:three_prime_UTR 70.0%
!! CGGTGTGGTGGGTTTCGCGG+AGG + chr3_1:2677729-2677748 None:intergenic 70.0%
!! CGGGGGCGTTTGGAGAGAGG+AGG + chr3_1:2677936-2677955 None:intergenic 70.0%
GCGACGGAGGGAACGGAGGA+AGG + chr3_1:2677992-2678011 None:intergenic 70.0%
AAGCGCGACGGAGGGAACGG+AGG + chr3_1:2677996-2678015 None:intergenic 70.0%
!! TGAGCCGAGGGCGTTGGCAG+TGG - chr3_1:2678542-2678561 Msa0344110:intron 70.0%
! GGACTGCCCCACAAGGCGCT+TGG - chr3_1:2680367-2680386 Msa0344110:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 2677568 2684351 2677568 ID=Msa0344110;Name=Msa0344110
chr3_1 mRNA 2677568 2684351 2677568 ID=Msa0344110-mRNA-1;Parent=Msa0344110;Name=Msa0344110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=114|1|1|1|1|1|9|276|1330
chr3_1 exon 2677568 2678548 2677568 ID=Msa0344110-mRNA-1:exon:795;Parent=Msa0344110-mRNA-1
chr3_1 exon 2678675 2678849 2678675 ID=Msa0344110-mRNA-1:exon:794;Parent=Msa0344110-mRNA-1
chr3_1 exon 2678933 2679059 2678933 ID=Msa0344110-mRNA-1:exon:793;Parent=Msa0344110-mRNA-1
chr3_1 exon 2679152 2679266 2679152 ID=Msa0344110-mRNA-1:exon:792;Parent=Msa0344110-mRNA-1
chr3_1 exon 2679444 2679531 2679444 ID=Msa0344110-mRNA-1:exon:791;Parent=Msa0344110-mRNA-1
chr3_1 exon 2679763 2679854 2679763 ID=Msa0344110-mRNA-1:exon:790;Parent=Msa0344110-mRNA-1
chr3_1 exon 2679950 2680444 2679950 ID=Msa0344110-mRNA-1:exon:789;Parent=Msa0344110-mRNA-1
chr3_1 exon 2681227 2681967 2681227 ID=Msa0344110-mRNA-1:exon:788;Parent=Msa0344110-mRNA-1
chr3_1 exon 2682783 2684351 2682783 ID=Msa0344110-mRNA-1:exon:787;Parent=Msa0344110-mRNA-1
chr3_1 five_prime_UTR 2684238 2684351 2684238 ID=Msa0344110-mRNA-1:five_prime_utr;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2682783 2684237 2682783 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2681227 2681967 2681227 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2679950 2680444 2679950 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2679763 2679854 2679763 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2679444 2679531 2679444 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2679152 2679266 2679152 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2678933 2679059 2678933 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2678675 2678849 2678675 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 CDS 2677844 2678548 2677844 ID=Msa0344110-mRNA-1:cds;Parent=Msa0344110-mRNA-1
chr3_1 three_prime_UTR 2677568 2677843 2677568 ID=Msa0344110-mRNA-1:three_prime_utr;Parent=Msa0344110-mRNA-1
Gene Sequence

>Msa0344110

ATGGACGACGAAACACTCTCCCGCATCGTAACAGAAATCTCCGACCTCCGCGAAACCCACCACACCGAAAATCCACAACCACTCTCCGAACAATCCCTCTCTTCTCTCCAAACCCTCCTCAACCATTCCCAACCCTTAGACCCACTCTACGACGCCGTTTCACCTTCCCACCTAATCCCTCCAATCGCCACCGCAATGGACTCATCTCCACCACCTCACTCTCTCCTCGCTTCTCACGTCTTCCTCTCTTTCCTCCTCTCTCCAAACGCCCCCGTTTTCACTCTCTTCACTCCTCTCTCCTTTCTCTCCTTCCTCCGTTCCCTCCGTCGCGCTTTCAAAAACACTAACCCAAATCCTAATAACAACGCTCAGCAGATTCGGAAGCGGAGACGGAACTCCAAAAACAAGAAAAATGTTCAAAATGACGATGATGAACCTAATTCGCCAAATTCTGTACAGAAAGTTGATGTTAGGGTTTTGATTTCGCTATTTGAGAAATTAGTTAATGTTATGGGTTTAATTCATCTTGATCGGTTTCCCGAGAGTTTGAAATCGTTGATTCAAACGATTTCTGAAGTTCCGTTGACTGCGATTGAATTGTGTAATGAGGTTCAGTATGGTAGATTGGTTGGCTTGTGTTCAAAGATTTTGAAAGAGGTTTTGAAACCGGAGCATGGGGAGGTTTCGAAGACAGCTGCTGAGGTTTTAAAGGCGATTTCACCTTTTGTTGTAATGCCGAAGTCTCAGGTGAGGAGTTTTGCTGTTGGTTTTGTTATTAGTTTGAGTAGGGATTCAGATGGTGTGAGGAAAGCGTTGGTTAATTTTCCGAGGTATTTGGCAAATAAGGCACCGGATAAAGCTGAGCCGAGGGCGTTGGCAGTGGATTTTATAATGGAGGTTGTTAGGGTTATGGAAGTGGGGGATCAGATTGAGTTTGTGAAGTATGTTGTGAAAATGAGTCAAGGGAAAACTAATTTAAGGCTTTTGGCGGTTGATCTTATTTTGAATCTTGTGACATTGTTGAAGGATCCTTTAGGGGTGAATTCGACGGATGAGGAAGAAGGGAATGTGGCGTGGGGGATTTGGTGTTTGGATGCGCTGGTGAAGCGTTGTTCGGATGTTAGTGCTACGATTCGAGGGCGAGCTTTGTCGACTTTGGCGCAGGTTGTTGGGTTTTTATCAGGTAGTGAAAAGGCTAGTGTGGTTTTGAAAGAGTTTATGGGTTTTGGTGATGGAAATGATGCGGGTGTCGGAGGAAAGGGAATCAATGAGATGCTTAGGAGAAGGTGTGTGGATGAGAAGGCGGTTGTGAGAAAAGCAGCTCTTTTGTTTGTTACTAACTTGACTGCTCTACTTGGAGGTGCTATTGATGAAGTGGTGCTGAAGACAATGGGAATGGCTTGTTCCGATTCACTTCTTAGCATTCGTAAAGCAGCTGCTGCCTCTCTTTCCGAGGCTTTCAGAACATTCTCAGCCGAAACGGTAACAACCGAGTGGCTACATTCAGTTCCTCGTCAAATAGCTGATAATGAAACTAGCATCCAAGAAGAATGTGAGAACTTGTTTCAAGAACTTGTTTTGGACCGAATATCTAGAACTGCAGCTGCCACCTCTTCATATATCGAACCTGCCTCTAGTATTAAAAAGAAAGGGAAAGGTTTAGACAACGAAATGGATATGCCTGTCCCCCAAGGAATTCTGTATCTCCTTAGAGAGATTTGCAATGGGGAGGTGAGTCCTTGGGTGAAAAAAATTTGCACAAACCTGGGCAAAAAGAAACGGTTGAATCACAAAATTGTTACGGCACTTCAGAATATAATTAAGGTGTCCGAGTCCATCTGGCTGAACCATAGCAAGCCAATAGAAAAGTGGACTGCCCCACAAGGCGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTTCTTCCAAAAGCAGTGGACTGGGAATTTCTTCATCATCATTGGCAGCTTCTTGACAAGCATAAAGTGAAAGGCGAGTTTAGAAGTCCAGTTGTACAAATAAATGCATTTGAGGGCGACGAAAGCATAGAATGCAATAATGTTGCCTGGGCTAGTGACCGAGTATTCCTCTTGCAAACAATCTCTAATGTTTCTGTCGAGCTGCCAACTGATCCTGCTGCTGATTTGGCTCATAACTTGCTCAAACGGGTTGAAAAATTCAACATGCATGCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAGCGAAAAGCTTCAGATGCAGCAACAGAAGAAGCAATAGTCTTGAAATGGGTACACCAAGTTCTATCCAGAGCTTCTCAAATAATAGAAACTTTTATTGCAGATAATTCAGAGCAAAATACAGAAACTGACTTCTTCACTCCACCTAGAAGTGGGCCAAGTAAAGGTCGGAAGTCAGGAAGAAAGCGCAAGTCATTGTCAAAGGCAATTACAGCTATTTATACAATTGGGTCTTTAATTATTGTTTGCCCATCTGCTGATATGAGTGCTATAATTCCATTATTGCACACTATCATCACCTCTGGGAATTCTGACCCAAAATTAAATAAGCTACTCGGCCCTGCAACCTCTCTGCAACAAGAATCTCCTTCTTTTTATATTCAAGGGTGGCTGACCATGGGCAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAGAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGGCTGACTCTGCAGCTCTTCGCAATAATATTGTGGTCACAATGGCAGACTTTTGTGTTCGGTACACTGCTCTTATTGATTGTTACATAACCAAGATCACACGGTGTCTCTTAGATCCTTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCGAGACTGTTGCAGAGGGATTACGTGAAATGGAGAGGTGTTCTATTTCTTCGTTTCCTTTTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGTTAGCAGATTTTCTCTTTGGAAATATTTTGAAAGTCAAGGCTCCTCTTTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTTTGAATGACTGCCGTGCCCATAATGGACATCGTGAGTCCAACGAATCACGAACGGAAAGCCAACTTTTTTCGATCAGGGGTGCTGATGAAAAATCAAGGTCTAGAAGAATGCACATTTATGTTTCTCTACTAAAGCAAATGGCTCCCGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCCGATGGTATGCTCAATATTGAAGATGCAACTGGACAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCATTCAATCCACTCGCGTGTCATCTGAGTCGGCAGACTTAGAAGAAGAAGGGGGAGAAAATGGATCTTCAACTAGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTCATTCAAAACACTATACCCATCTTCATAGAGTTGAAACGTCTATTGGAAACCAAGAACAGTCCCCTCATAGGTTCTCTCATGGAATGCCTTCGGGTCCTTCTCAAGGACTACAAGAATGAGATTGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATCTATGACATGCAGAAATATGAAGCTGCAAAAGCTAAAGCAACAGTTGCTGAGGCTGTAGCCTCCAAGCCAAAATCAGTTGCAAATCAATCACCTGATGTTGCTAAGAATCTGGCAAAGGAACAAGAACAAACACATGAACAAAATGAGGACAGTGACAAGGCCCCAAGTGATTCAAAAATTGCTTCAGCAAGGGCAGATGCTGCAGCTGCAGCAACAGCCCGTTCTTTGCTAAAGGAAATTAACAAGGGGACATCAACACCACAACTTAGTTCTTTGAACGTTCCCAAAGTCAAGTCTTTCACTGGTGGACTCGTATCTAGAGGTGATAAGCGCTTGGATGTCTTAAAATCTGTGCAGAAAAAACATTCTTTTGATTCTGATGAAGAGAACTAA
Protein sequence

>Msa0344110

MDDETLSRIVTEISDLRETHHTENPQPLSEQSLSSLQTLLNHSQPLDPLYDAVSPSHLIPPIATAMDSSPPPHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSLRRAFKNTNPNPNNNAQQIRKRRRNSKNKKNVQNDDDEPNSPNSVQKVDVRVLISLFEKLVNVMGLIHLDRFPESLKSLIQTISEVPLTAIELCNEVQYGRLVGLCSKILKEVLKPEHGEVSKTAAEVLKAISPFVVMPKSQVRSFAVGFVISLSRDSDGVRKALVNFPRYLANKAPDKAEPRALAVDFIMEVVRVMEVGDQIEFVKYVVKMSQGKTNLRLLAVDLILNLVTLLKDPLGVNSTDEEEGNVAWGIWCLDALVKRCSDVSATIRGRALSTLAQVVGFLSGSEKASVVLKEFMGFGDGNDAGVGGKGINEMLRRRCVDEKAVVRKAALLFVTNLTALLGGAIDEVVLKTMGMACSDSLLSIRKAAAASLSEAFRTFSAETVTTEWLHSVPRQIADNETSIQEECENLFQELVLDRISRTAAATSSYIEPASSIKKKGKGLDNEMDMPVPQGILYLLREICNGEVSPWVKKICTNLGKKKRLNHKIVTALQNIIKVSESIWLNHSKPIEKWTAPQGAWFLLSEVSVFLPKAVDWEFLHHHWQLLDKHKVKGEFRSPVVQINAFEGDESIECNNVAWASDRVFLLQTISNVSVELPTDPAADLAHNLLKRVEKFNMHATEVDAHVKALKTLCKRKASDAATEEAIVLKWVHQVLSRASQIIETFIADNSEQNTETDFFTPPRSGPSKGRKSGRKRKSLSKAITAIYTIGSLIIVCPSADMSAIIPLLHTIITSGNSDPKLNKLLGPATSLQQESPSFYIQGWLTMGKLCLADGKLAKNYIPLFVQELEKADSAALRNNIVVTMADFCVRYTALIDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAVFVLNDCRAHNGHRESNESRTESQLFSIRGADEKSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKEIRIQSTRVSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAVASKPKSVANQSPDVAKNLAKEQEQTHEQNEDSDKAPSDSKIASARADAAAAATARSLLKEINKGTSTPQLSSLNVPKVKSFTGGLVSRGDKRLDVLKSVQKKHSFDSDEEN*