AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0201100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 84 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGCAACCTTATCATTTC+TGG 0.095410 2_1:-21863386 Msa0201100:three_prime_UTR
ACATAACCCCAAACAGATTT+TGG 0.153224 2_1:+21865201 None:intergenic
AAATTTAATTGTTACAAAAT+TGG 0.209089 2_1:+21863193 None:intergenic
TATTTGTAGCATGTAATTAT+AGG 0.239260 2_1:-21863320 Msa0201100:three_prime_UTR
ATGTGCTAGACGATGATATC+TGG 0.266224 2_1:-21863417 Msa0201100:three_prime_UTR
TTCCCACTTGGTGTCGTTAA+AGG 0.289921 2_1:-21865032 Msa0201100:five_prime_UTR
CTTATGCTGCAAGCTGTAAT+AGG 0.294960 2_1:-21863028 Msa0201100:three_prime_UTR
GTATGATCCAAAATCTGTTT+GGG 0.312638 2_1:-21865208 Msa0201100:five_prime_UTR
TTTGTGTAGGTCACGGTTAA+AGG 0.312855 2_1:-21864896 Msa0201100:intron
TTCAGCTGTGAACTTAGTTC+TGG 0.333589 2_1:+21863711 None:intergenic
TGCTGAACAAATTGTACTTA+TGG 0.340654 2_1:-21864813 Msa0201100:CDS
TTGGAAATTTGTCGCTTGCC+TGG 0.357528 2_1:+21864648 None:intergenic
AGTATGATCCAAAATCTGTT+TGG 0.358696 2_1:-21865209 Msa0201100:five_prime_UTR
AATTTGAGAACACGGCTATA+AGG 0.377022 2_1:+21863240 None:intergenic
ACCATACCTTGTGTTCAATA+AGG 0.385103 2_1:+21864426 None:intergenic
AATTTGTCGCTTGCCTGGCC+TGG 0.401249 2_1:+21864653 None:intergenic
AAATGTAAGCATGAATAAAC+TGG 0.406955 2_1:+21863075 None:intergenic
TCGTAAGAAAGGTACTCTTC+AGG 0.428537 2_1:+21864773 None:intergenic
AGTTCACTTGTTTGTACTGT+TGG 0.437924 2_1:-21864713 Msa0201100:CDS
GAACAAGTTGGTTTCCCACT+TGG 0.439155 2_1:-21865044 Msa0201100:five_prime_UTR
TTGGTTGGCCTCCTCTTGAT+AGG 0.440619 2_1:+21863212 None:intergenic
GGTGTCGTTAAAGGCATAGC+TGG 0.445854 2_1:-21865023 Msa0201100:five_prime_UTR
AGTGCTAGTAATGTCATTCC+AGG 0.447467 2_1:-21864671 Msa0201100:CDS
ATAATGTGATGATTGGTTGC+AGG 0.450358 2_1:-21864558 Msa0201100:CDS
CATGGACATTGGAACAGTTC+CGG 0.452698 2_1:+21864859 None:intergenic
TTTGATCATATGTATGATCA+TGG 0.480276 2_1:+21863139 None:intergenic
CCAACATTAATGAGTGGAGC+AGG 0.482594 2_1:-21863633 Msa0201100:three_prime_UTR
TGTGATGATAATGTGATGAT+TGG 0.483174 2_1:-21864565 Msa0201100:CDS
TTAATTGTTACAAAATTGGT+TGG 0.498310 2_1:+21863197 None:intergenic
GTCCATGCGTCAAGATCCTA+TGG 0.502369 2_1:-21864843 Msa0201100:CDS
TGCAACGACCATCGTAAGAA+AGG 0.515554 2_1:+21864762 None:intergenic
GCTGCAGCTTCACATTGAGC+AGG 0.516545 2_1:-21865078 Msa0201100:intron
GTACTTGATAAATTGAAGAA+AGG 0.516995 2_1:-21863107 Msa0201100:three_prime_UTR
TACCTTGTGTTCAATAAGGC+AGG 0.520522 2_1:+21864430 None:intergenic
GACGATGATATCTGGGCGGC+TGG 0.523255 2_1:-21863409 Msa0201100:three_prime_UTR
ATACGAGCAATTGATGATAC+AGG 0.526748 2_1:-21864518 Msa0201100:CDS
GGATCTTGACGCATGGACAT+TGG 0.526811 2_1:+21864848 None:intergenic
TGTTCACCTCAGCATGATGC+AGG 0.530008 2_1:-21863750 Msa0201100:intron
AGCTGGGCAGACAAGATTGA+AGG 0.535514 2_1:-21865006 Msa0201100:intron
ACATATCTGATAAATTCGAT+TGG 0.541292 2_1:+21864469 None:intergenic
GGTCCTGTGCTTGAACAAGT+TGG 0.545766 2_1:-21865056 Msa0201100:five_prime_UTR
TAGTAATGTCATTCCAGGCC+AGG 0.550343 2_1:-21864666 Msa0201100:CDS
TGTGCTAGACGATGATATCT+GGG 0.573456 2_1:-21863416 Msa0201100:three_prime_UTR
CTGCAGCTTCACATTGAGCA+GGG 0.575143 2_1:-21865077 Msa0201100:intron
TTCCTGCCTTATTGAACACA+AGG 0.575456 2_1:-21864432 Msa0201100:intron
CAAATTATTCTCCTATCAAG+AGG 0.575584 2_1:-21863223 Msa0201100:three_prime_UTR
ATCTGTTTGGGGTTATGTCG+AGG 0.575812 2_1:-21865196 Msa0201100:intron
AAAGGCTCACAAGGTCATGC+CGG 0.576546 2_1:-21864878 Msa0201100:exon
CAGCTTATTCTGCACTCAAG+AGG 0.578224 2_1:-21863683 Msa0201100:three_prime_UTR
TGTTCAGCAGCAGCCACCAT+AGG 0.579164 2_1:+21864827 None:intergenic
TGGAGCAGGGCATGATGCCA+TGG 0.582009 2_1:-21863619 Msa0201100:three_prime_UTR
TCGTCTAGCACATCCTCTTG+TGG 0.582928 2_1:+21863427 None:intergenic
AAACCAACTTGTTCAAGCAC+AGG 0.588436 2_1:+21865053 None:intergenic
ATCAATTGCTCGTATATCCA+CGG 0.588827 2_1:+21864526 None:intergenic
CCTGCTCCACTCATTAATGT+TGG 0.589437 2_1:+21863633 None:intergenic
GGAATGACATTACTAGCACT+TGG 0.589744 2_1:+21864674 None:intergenic
TTCTGCACTCAAGAGGATGG+AGG 0.594618 2_1:-21863676 Msa0201100:three_prime_UTR
GGCAATGTCTCACTTAACAA+AGG 0.607328 2_1:-21863598 Msa0201100:intron
ACTCTTCAGGATGTTTGCAG+AGG 0.608033 2_1:+21864786 None:intergenic
TTATTCTGCACTCAAGAGGA+TGG 0.613099 2_1:-21863679 Msa0201100:three_prime_UTR
GTGTCGTTAAAGGCATAGCT+GGG 0.619543 2_1:-21865022 Msa0201100:five_prime_UTR
TCTGCACTCAAGAGGATGGA+GGG 0.619874 2_1:-21863675 Msa0201100:three_prime_UTR
GAACTCGATAGAAGCTGCGG+AGG 0.620673 2_1:-21865250 Msa0201100:five_prime_UTR
ATGCTGTTTGTGCGATGTCG+CGG 0.620832 2_1:-21863466 Msa0201100:three_prime_UTR
ATGCCTTTAACGACACCAAG+TGG 0.623755 2_1:+21865029 None:intergenic
TTGATCTGGTGATCTTCAAG+TGG 0.624881 2_1:-21864618 Msa0201100:CDS
CATAAGTCACTCTCCACAAG+AGG 0.625552 2_1:-21863440 Msa0201100:three_prime_UTR
CACCATAGGATCTTGACGCA+TGG 0.629370 2_1:+21864841 None:intergenic
GTCACGGTTAAAGGCTCACA+AGG 0.633455 2_1:-21864887 Msa0201100:five_prime_UTR
AGGAGAATAATTTGAGAACA+CGG 0.640264 2_1:+21863232 None:intergenic
GAAGTACCAACATTAATGAG+TGG 0.642265 2_1:-21863639 Msa0201100:three_prime_UTR
GTTGCAGGTTACATATACCG+TGG 0.655260 2_1:-21864543 Msa0201100:CDS
AGAGAACTCGATAGAAGCTG+CGG 0.656218 2_1:-21865253 Msa0201100:five_prime_UTR
TATGATCCAAAATCTGTTTG+GGG 0.656816 2_1:-21865207 Msa0201100:five_prime_UTR
TGTTAAGTGAGACATTGCCA+TGG 0.658188 2_1:+21863602 None:intergenic
CAACATTAATGAGTGGAGCA+GGG 0.661114 2_1:-21863632 Msa0201100:three_prime_UTR
AATTGATGATACAGGACGTG+AGG 0.664831 2_1:-21864510 Msa0201100:CDS
ATTATTCTCCTATCAAGAGG+AGG 0.665582 2_1:-21863220 Msa0201100:three_prime_UTR
TGCCTTTAACGACACCAAGT+GGG 0.666563 2_1:+21865030 None:intergenic
GAAGAGTACCTTTCTTACGA+TGG 0.667691 2_1:-21864770 Msa0201100:CDS
CTGTTTGTGCGATGTCGCGG+AGG 0.676245 2_1:-21863463 Msa0201100:three_prime_UTR
CTGTTGGTGAAATATCAACA+TGG 0.708340 2_1:-21864697 Msa0201100:CDS
CATGCGTCAAGATCCTATGG+TGG 0.726797 2_1:-21864840 Msa0201100:CDS
GCTAGACGATGATATCTGGG+CGG 0.762672 2_1:-21863413 Msa0201100:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAATTCTTAGAATTT+AGG - chr2_1:21863919-21863938 Msa0201100:intron 10.0%
!! TATAAAATTCTTAGAATTTA+GGG - chr2_1:21863920-21863939 Msa0201100:intron 10.0%
!! TATAAATACTTATAGTAAAT+AGG - chr2_1:21864333-21864352 Msa0201100:intron 10.0%
!! ATAATCAAATGTTAATATAT+TGG - chr2_1:21864690-21864709 Msa0201100:CDS 10.0%
!! AAATTTAATTGTTACAAAAT+TGG + chr2_1:21865036-21865055 None:intergenic 10.0%
!! TTATAAAATTCTTAGAATTT+AGG - chr2_1:21863919-21863938 Msa0201100:intron 10.0%
!! TATAAAATTCTTAGAATTTA+GGG - chr2_1:21863920-21863939 Msa0201100:intron 10.0%
!! TATAAATACTTATAGTAAAT+AGG - chr2_1:21864333-21864352 Msa0201100:intron 10.0%
!! ATAATCAAATGTTAATATAT+TGG - chr2_1:21864690-21864709 Msa0201100:CDS 10.0%
!! AAATTTAATTGTTACAAAAT+TGG + chr2_1:21865036-21865055 None:intergenic 10.0%
!!! AACATGAAGTTTTTTTTTTA+TGG - chr2_1:21865261-21865280 Msa0201100:five_prime_UTR 15.0%
!!! ACATGAAGTTTTTTTTTTAT+GGG - chr2_1:21865262-21865281 Msa0201100:five_prime_UTR 15.0%
!!! AACATGAAGTTTTTTTTTTA+TGG - chr2_1:21865261-21865280 Msa0201100:five_prime_UTR 15.0%
!!! ACATGAAGTTTTTTTTTTAT+GGG - chr2_1:21865262-21865281 Msa0201100:five_prime_UTR 15.0%
!! AAACAGCATATCATTAATAT+CGG + chr2_1:21863312-21863331 None:intergenic 20.0%
!! TTATGCTTAAAGAATATGTT+TGG + chr2_1:21863840-21863859 None:intergenic 20.0%
!!! AGTAAATAGGTATTTTTTGT+TGG - chr2_1:21864346-21864365 Msa0201100:intron 20.0%
!! TATTTGTAGCATGTAATTAT+AGG - chr2_1:21864906-21864925 Msa0201100:intron 20.0%
!! TTAATTGTTACAAAATTGGT+TGG + chr2_1:21865032-21865051 None:intergenic 20.0%
!! AAACAGCATATCATTAATAT+CGG + chr2_1:21863312-21863331 None:intergenic 20.0%
!! TTATGCTTAAAGAATATGTT+TGG + chr2_1:21863840-21863859 None:intergenic 20.0%
!!! AGTAAATAGGTATTTTTTGT+TGG - chr2_1:21864346-21864365 Msa0201100:intron 20.0%
!! TATTTGTAGCATGTAATTAT+AGG - chr2_1:21864906-21864925 Msa0201100:intron 20.0%
!! TTAATTGTTACAAAATTGGT+TGG + chr2_1:21865032-21865051 None:intergenic 20.0%
! TTTCAAATGCTTAAACAAGT+TGG + chr2_1:21863257-21863276 None:intergenic 25.0%
! ACATATCTGATAAATTCGAT+TGG + chr2_1:21863760-21863779 None:intergenic 25.0%
! GAAATGTGTTTATAAGTGAT+GGG + chr2_1:21863987-21864006 None:intergenic 25.0%
! AAATGTGTTTAGATAAGTAG+TGG + chr2_1:21864176-21864195 None:intergenic 25.0%
! TACTTATCTAAACACATTTC+AGG - chr2_1:21864177-21864196 Msa0201100:intron 25.0%
! ACTCTTAATAAAAACGAATG+TGG - chr2_1:21864221-21864240 Msa0201100:intron 25.0%
!! TGTTTTATCCTTTTAGATTG+AGG + chr2_1:21864270-21864289 None:intergenic 25.0%
!!! AAATAGGTATTTTTTGTTGG+TGG - chr2_1:21864349-21864368 Msa0201100:intron 25.0%
!!! AATAGGTATTTTTTGTTGGT+GGG - chr2_1:21864350-21864369 Msa0201100:intron 25.0%
!! TAGATTTTCCAGAAATGATA+AGG + chr2_1:21864851-21864870 None:intergenic 25.0%
! TTTGATCATATGTATGATCA+TGG + chr2_1:21865090-21865109 None:intergenic 25.0%
! GTACTTGATAAATTGAAGAA+AGG - chr2_1:21865119-21865138 Msa0201100:intron 25.0%
! AAATGTAAGCATGAATAAAC+TGG + chr2_1:21865154-21865173 None:intergenic 25.0%
! GGATATTTAAGTATATGTGA+AGG - chr2_1:21865283-21865302 Msa0201100:five_prime_UTR 25.0%
! TTTCAAATGCTTAAACAAGT+TGG + chr2_1:21863257-21863276 None:intergenic 25.0%
! ACATATCTGATAAATTCGAT+TGG + chr2_1:21863760-21863779 None:intergenic 25.0%
! GAAATGTGTTTATAAGTGAT+GGG + chr2_1:21863987-21864006 None:intergenic 25.0%
! AAATGTGTTTAGATAAGTAG+TGG + chr2_1:21864176-21864195 None:intergenic 25.0%
! TACTTATCTAAACACATTTC+AGG - chr2_1:21864177-21864196 Msa0201100:intron 25.0%
! ACTCTTAATAAAAACGAATG+TGG - chr2_1:21864221-21864240 Msa0201100:intron 25.0%
!! TGTTTTATCCTTTTAGATTG+AGG + chr2_1:21864270-21864289 None:intergenic 25.0%
!!! AAATAGGTATTTTTTGTTGG+TGG - chr2_1:21864349-21864368 Msa0201100:intron 25.0%
!!! AATAGGTATTTTTTGTTGGT+GGG - chr2_1:21864350-21864369 Msa0201100:intron 25.0%
!! TAGATTTTCCAGAAATGATA+AGG + chr2_1:21864851-21864870 None:intergenic 25.0%
! TTTGATCATATGTATGATCA+TGG + chr2_1:21865090-21865109 None:intergenic 25.0%
! GTACTTGATAAATTGAAGAA+AGG - chr2_1:21865119-21865138 Msa0201100:intron 25.0%
! AAATGTAAGCATGAATAAAC+TGG + chr2_1:21865154-21865173 None:intergenic 25.0%
AGTATGATCCAAAATCTGTT+TGG - chr2_1:21863017-21863036 Msa0201100:three_prime_UTR 30.0%
GTATGATCCAAAATCTGTTT+GGG - chr2_1:21863018-21863037 Msa0201100:three_prime_UTR 30.0%
TATGATCCAAAATCTGTTTG+GGG - chr2_1:21863019-21863038 Msa0201100:three_prime_UTR 30.0%
GTAATTAGCATCCGTAAAAA+AGG - chr2_1:21863277-21863296 Msa0201100:three_prime_UTR 30.0%
!!! GGATTTCAGTTCCTTTTTTA+CGG + chr2_1:21863291-21863310 None:intergenic 30.0%
!!! AATGATATGCTGTTTTGTGT+AGG - chr2_1:21863317-21863336 Msa0201100:three_prime_UTR 30.0%
TGCTGAACAAATTGTACTTA+TGG - chr2_1:21863413-21863432 Msa0201100:three_prime_UTR 30.0%
! TGTGATGATAATGTGATGAT+TGG - chr2_1:21863661-21863680 Msa0201100:three_prime_UTR 30.0%
GCTTAAAGAATATGTTTGGT+CGG + chr2_1:21863836-21863855 None:intergenic 30.0%
ATACCTTATCCATACAAAAC+CGG - chr2_1:21863944-21863963 Msa0201100:intron 30.0%
GGAAATGTGTTTATAAGTGA+TGG + chr2_1:21863988-21864007 None:intergenic 30.0%
! GTTTATCCAAGACACATTTT+AGG + chr2_1:21864082-21864101 None:intergenic 30.0%
GTCTCAAATTTGATGAGATA+AGG + chr2_1:21864203-21864222 None:intergenic 30.0%
!! AGGTTTTTCAGTTTGTTTTC+TGG - chr2_1:21864425-21864444 Msa0201100:intron 30.0%
TTAGAATATGACAACGTATG+AGG - chr2_1:21864721-21864740 Msa0201100:CDS 30.0%
TTTAGCAACCTTATCATTTC+TGG - chr2_1:21864840-21864859 Msa0201100:CDS 30.0%
AGGAGAATAATTTGAGAACA+CGG + chr2_1:21864997-21865016 None:intergenic 30.0%
CAAATTATTCTCCTATCAAG+AGG - chr2_1:21865003-21865022 Msa0201100:intron 30.0%
AGTATGATCCAAAATCTGTT+TGG - chr2_1:21863017-21863036 Msa0201100:three_prime_UTR 30.0%
GTATGATCCAAAATCTGTTT+GGG - chr2_1:21863018-21863037 Msa0201100:three_prime_UTR 30.0%
TATGATCCAAAATCTGTTTG+GGG - chr2_1:21863019-21863038 Msa0201100:three_prime_UTR 30.0%
GTAATTAGCATCCGTAAAAA+AGG - chr2_1:21863277-21863296 Msa0201100:three_prime_UTR 30.0%
!!! GGATTTCAGTTCCTTTTTTA+CGG + chr2_1:21863291-21863310 None:intergenic 30.0%
!!! AATGATATGCTGTTTTGTGT+AGG - chr2_1:21863317-21863336 Msa0201100:three_prime_UTR 30.0%
TGCTGAACAAATTGTACTTA+TGG - chr2_1:21863413-21863432 Msa0201100:three_prime_UTR 30.0%
! TGTGATGATAATGTGATGAT+TGG - chr2_1:21863661-21863680 Msa0201100:three_prime_UTR 30.0%
GCTTAAAGAATATGTTTGGT+CGG + chr2_1:21863836-21863855 None:intergenic 30.0%
ATACCTTATCCATACAAAAC+CGG - chr2_1:21863944-21863963 Msa0201100:intron 30.0%
GGAAATGTGTTTATAAGTGA+TGG + chr2_1:21863988-21864007 None:intergenic 30.0%
! GTTTATCCAAGACACATTTT+AGG + chr2_1:21864082-21864101 None:intergenic 30.0%
GTCTCAAATTTGATGAGATA+AGG + chr2_1:21864203-21864222 None:intergenic 30.0%
!! AGGTTTTTCAGTTTGTTTTC+TGG - chr2_1:21864425-21864444 Msa0201100:intron 30.0%
TTAGAATATGACAACGTATG+AGG - chr2_1:21864721-21864740 Msa0201100:CDS 30.0%
TTTAGCAACCTTATCATTTC+TGG - chr2_1:21864840-21864859 Msa0201100:CDS 30.0%
AGGAGAATAATTTGAGAACA+CGG + chr2_1:21864997-21865016 None:intergenic 30.0%
CAAATTATTCTCCTATCAAG+AGG - chr2_1:21865003-21865022 Msa0201100:intron 30.0%
! ACATAACCCCAAACAGATTT+TGG + chr2_1:21863028-21863047 None:intergenic 35.0%
TTTGCGTTAGTCGTTTATAG+TGG - chr2_1:21863064-21863083 Msa0201100:three_prime_UTR 35.0%
TAGTCGTTTATAGTGGTGTT+TGG - chr2_1:21863071-21863090 Msa0201100:three_prime_UTR 35.0%
AGTTCACTTGTTTGTACTGT+TGG - chr2_1:21863513-21863532 Msa0201100:intron 35.0%
! CTGTTGGTGAAATATCAACA+TGG - chr2_1:21863529-21863548 Msa0201100:intron 35.0%
TTTCCAAAAAGCTGTTGATC+TGG - chr2_1:21863594-21863613 Msa0201100:intron 35.0%
! ATAATGTGATGATTGGTTGC+AGG - chr2_1:21863668-21863687 Msa0201100:three_prime_UTR 35.0%
ATCAATTGCTCGTATATCCA+CGG + chr2_1:21863703-21863722 None:intergenic 35.0%
! ATACGAGCAATTGATGATAC+AGG - chr2_1:21863708-21863727 Msa0201100:three_prime_UTR 35.0%
ACCATACCTTGTGTTCAATA+AGG + chr2_1:21863803-21863822 None:intergenic 35.0%
TGATGTCTTTCTAAGTGAGA+GGG - chr2_1:21863874-21863893 Msa0201100:intron 35.0%
!! AAACCGGTTTTGTATGGATA+AGG + chr2_1:21863950-21863969 None:intergenic 35.0%
GTCTCACGTAGTATGAAATA+GGG + chr2_1:21864014-21864033 None:intergenic 35.0%
AGTCTCACGTAGTATGAAAT+AGG + chr2_1:21864015-21864034 None:intergenic 35.0%
!! CCAGTTTTGTAGAGATTAGT+TGG + chr2_1:21864134-21864153 None:intergenic 35.0%
CCAACTAATCTCTACAAAAC+TGG - chr2_1:21864131-21864150 Msa0201100:intron 35.0%
! ATCTAAAACAACCAGGCATA+AGG + chr2_1:21864398-21864417 None:intergenic 35.0%
! AGACAAGATCTAAAACAACC+AGG + chr2_1:21864405-21864424 None:intergenic 35.0%
!!! GGTTGTTTTAGATCTTGTCT+AGG - chr2_1:21864405-21864424 Msa0201100:intron 35.0%
GGTGAACACAGAAAAATCAT+TGG + chr2_1:21864464-21864483 None:intergenic 35.0%
! GAAGTACCAACATTAATGAG+TGG - chr2_1:21864587-21864606 Msa0201100:CDS 35.0%
AATTTGAGAACACGGCTATA+AGG + chr2_1:21864989-21865008 None:intergenic 35.0%
ATTATTCTCCTATCAAGAGG+AGG - chr2_1:21865006-21865025 Msa0201100:intron 35.0%
! ACATAACCCCAAACAGATTT+TGG + chr2_1:21863028-21863047 None:intergenic 35.0%
TTTGCGTTAGTCGTTTATAG+TGG - chr2_1:21863064-21863083 Msa0201100:three_prime_UTR 35.0%
TAGTCGTTTATAGTGGTGTT+TGG - chr2_1:21863071-21863090 Msa0201100:three_prime_UTR 35.0%
AGTTCACTTGTTTGTACTGT+TGG - chr2_1:21863513-21863532 Msa0201100:intron 35.0%
! CTGTTGGTGAAATATCAACA+TGG - chr2_1:21863529-21863548 Msa0201100:intron 35.0%
TTTCCAAAAAGCTGTTGATC+TGG - chr2_1:21863594-21863613 Msa0201100:intron 35.0%
! ATAATGTGATGATTGGTTGC+AGG - chr2_1:21863668-21863687 Msa0201100:three_prime_UTR 35.0%
ATCAATTGCTCGTATATCCA+CGG + chr2_1:21863703-21863722 None:intergenic 35.0%
! ATACGAGCAATTGATGATAC+AGG - chr2_1:21863708-21863727 Msa0201100:three_prime_UTR 35.0%
ACCATACCTTGTGTTCAATA+AGG + chr2_1:21863803-21863822 None:intergenic 35.0%
TGATGTCTTTCTAAGTGAGA+GGG - chr2_1:21863874-21863893 Msa0201100:intron 35.0%
!! AAACCGGTTTTGTATGGATA+AGG + chr2_1:21863950-21863969 None:intergenic 35.0%
GTCTCACGTAGTATGAAATA+GGG + chr2_1:21864014-21864033 None:intergenic 35.0%
AGTCTCACGTAGTATGAAAT+AGG + chr2_1:21864015-21864034 None:intergenic 35.0%
!! CCAGTTTTGTAGAGATTAGT+TGG + chr2_1:21864134-21864153 None:intergenic 35.0%
CCAACTAATCTCTACAAAAC+TGG - chr2_1:21864131-21864150 Msa0201100:intron 35.0%
! ATCTAAAACAACCAGGCATA+AGG + chr2_1:21864398-21864417 None:intergenic 35.0%
! AGACAAGATCTAAAACAACC+AGG + chr2_1:21864405-21864424 None:intergenic 35.0%
!!! GGTTGTTTTAGATCTTGTCT+AGG - chr2_1:21864405-21864424 Msa0201100:intron 35.0%
GGTGAACACAGAAAAATCAT+TGG + chr2_1:21864464-21864483 None:intergenic 35.0%
! GAAGTACCAACATTAATGAG+TGG - chr2_1:21864587-21864606 Msa0201100:CDS 35.0%
AATTTGAGAACACGGCTATA+AGG + chr2_1:21864989-21865008 None:intergenic 35.0%
ATTATTCTCCTATCAAGAGG+AGG - chr2_1:21865006-21865025 Msa0201100:intron 35.0%
AGCTGCAGCACATAAGAAAT+GGG + chr2_1:21863137-21863156 None:intergenic 40.0%
AAGCTGCAGCACATAAGAAA+TGG + chr2_1:21863138-21863157 None:intergenic 40.0%
! AAACCAACTTGTTCAAGCAC+AGG + chr2_1:21863176-21863195 None:intergenic 40.0%
!!! ATGCTGTTTTGTGTAGGTCA+CGG - chr2_1:21863323-21863342 Msa0201100:three_prime_UTR 40.0%
TTTGTGTAGGTCACGGTTAA+AGG - chr2_1:21863330-21863349 Msa0201100:three_prime_UTR 40.0%
!! TCGTAAGAAAGGTACTCTTC+AGG + chr2_1:21863456-21863475 None:intergenic 40.0%
!! GAAGAGTACCTTTCTTACGA+TGG - chr2_1:21863456-21863475 Msa0201100:three_prime_UTR 40.0%
GGAATGACATTACTAGCACT+TGG + chr2_1:21863555-21863574 None:intergenic 40.0%
AGTGCTAGTAATGTCATTCC+AGG - chr2_1:21863555-21863574 Msa0201100:intron 40.0%
! TCACCAGATCAACAGCTTTT+TGG + chr2_1:21863600-21863619 None:intergenic 40.0%
TTGATCTGGTGATCTTCAAG+TGG - chr2_1:21863608-21863627 Msa0201100:three_prime_UTR 40.0%
! AATTGATGATACAGGACGTG+AGG - chr2_1:21863716-21863735 Msa0201100:three_prime_UTR 40.0%
! TTCCTGCCTTATTGAACACA+AGG - chr2_1:21863794-21863813 Msa0201100:intron 40.0%
TACCTTGTGTTCAATAAGGC+AGG + chr2_1:21863799-21863818 None:intergenic 40.0%
! GCCTTATTGAACACAAGGTA+TGG - chr2_1:21863799-21863818 Msa0201100:intron 40.0%
CTGATGTCTTTCTAAGTGAG+AGG - chr2_1:21863873-21863892 Msa0201100:intron 40.0%
!! CCTTACAAACCGGTTTTGTA+TGG + chr2_1:21863956-21863975 None:intergenic 40.0%
!! CCATACAAAACCGGTTTGTA+AGG - chr2_1:21863953-21863972 Msa0201100:intron 40.0%
ACGTAGTATGAAATAGGGAC+TGG + chr2_1:21864009-21864028 None:intergenic 40.0%
ACTGTTCTCACATTCAGAAC+TGG - chr2_1:21864043-21864062 Msa0201100:intron 40.0%
!! CCAAGACACATTTTAGGTCT+TGG + chr2_1:21864076-21864095 None:intergenic 40.0%
CCAAGACCTAAAATGTGTCT+TGG - chr2_1:21864073-21864092 Msa0201100:intron 40.0%
!! CTCTACAAAACTGGCTTGTA+AGG - chr2_1:21864140-21864159 Msa0201100:intron 40.0%
AGGTCGAACCTCAATCTAAA+AGG - chr2_1:21864259-21864278 Msa0201100:intron 40.0%
ACACTACTTACCACTATGCT+AGG - chr2_1:21864290-21864309 Msa0201100:intron 40.0%
TAAAACAACCAGGCATAAGG+TGG + chr2_1:21864395-21864414 None:intergenic 40.0%
TTCAGCTGTGAACTTAGTTC+TGG + chr2_1:21864518-21864537 None:intergenic 40.0%
TTATTCTGCACTCAAGAGGA+TGG - chr2_1:21864547-21864566 Msa0201100:CDS 40.0%
CAACATTAATGAGTGGAGCA+GGG - chr2_1:21864594-21864613 Msa0201100:CDS 40.0%
TGTTAAGTGAGACATTGCCA+TGG + chr2_1:21864627-21864646 None:intergenic 40.0%
GGCAATGTCTCACTTAACAA+AGG - chr2_1:21864628-21864647 Msa0201100:CDS 40.0%
CAACGTATGAGGATTTGAAC+AGG - chr2_1:21864732-21864751 Msa0201100:CDS 40.0%
GTATGAGGATTTGAACAGGT+GGG - chr2_1:21864736-21864755 Msa0201100:CDS 40.0%
ATGTGCTAGACGATGATATC+TGG - chr2_1:21864809-21864828 Msa0201100:CDS 40.0%
TGTGCTAGACGATGATATCT+GGG - chr2_1:21864810-21864829 Msa0201100:CDS 40.0%
CTTATGCTGCAAGCTGTAAT+AGG - chr2_1:21865198-21865217 Msa0201100:five_prime_UTR 40.0%
AGCTGCAGCACATAAGAAAT+GGG + chr2_1:21863137-21863156 None:intergenic 40.0%
AAGCTGCAGCACATAAGAAA+TGG + chr2_1:21863138-21863157 None:intergenic 40.0%
! AAACCAACTTGTTCAAGCAC+AGG + chr2_1:21863176-21863195 None:intergenic 40.0%
!!! ATGCTGTTTTGTGTAGGTCA+CGG - chr2_1:21863323-21863342 Msa0201100:three_prime_UTR 40.0%
TTTGTGTAGGTCACGGTTAA+AGG - chr2_1:21863330-21863349 Msa0201100:three_prime_UTR 40.0%
!! TCGTAAGAAAGGTACTCTTC+AGG + chr2_1:21863456-21863475 None:intergenic 40.0%
!! GAAGAGTACCTTTCTTACGA+TGG - chr2_1:21863456-21863475 Msa0201100:three_prime_UTR 40.0%
GGAATGACATTACTAGCACT+TGG + chr2_1:21863555-21863574 None:intergenic 40.0%
AGTGCTAGTAATGTCATTCC+AGG - chr2_1:21863555-21863574 Msa0201100:intron 40.0%
! TCACCAGATCAACAGCTTTT+TGG + chr2_1:21863600-21863619 None:intergenic 40.0%
TTGATCTGGTGATCTTCAAG+TGG - chr2_1:21863608-21863627 Msa0201100:three_prime_UTR 40.0%
! AATTGATGATACAGGACGTG+AGG - chr2_1:21863716-21863735 Msa0201100:three_prime_UTR 40.0%
! TTCCTGCCTTATTGAACACA+AGG - chr2_1:21863794-21863813 Msa0201100:intron 40.0%
TACCTTGTGTTCAATAAGGC+AGG + chr2_1:21863799-21863818 None:intergenic 40.0%
! GCCTTATTGAACACAAGGTA+TGG - chr2_1:21863799-21863818 Msa0201100:intron 40.0%
CTGATGTCTTTCTAAGTGAG+AGG - chr2_1:21863873-21863892 Msa0201100:intron 40.0%
!! CCTTACAAACCGGTTTTGTA+TGG + chr2_1:21863956-21863975 None:intergenic 40.0%
!! CCATACAAAACCGGTTTGTA+AGG - chr2_1:21863953-21863972 Msa0201100:intron 40.0%
ACGTAGTATGAAATAGGGAC+TGG + chr2_1:21864009-21864028 None:intergenic 40.0%
ACTGTTCTCACATTCAGAAC+TGG - chr2_1:21864043-21864062 Msa0201100:intron 40.0%
!! CCAAGACACATTTTAGGTCT+TGG + chr2_1:21864076-21864095 None:intergenic 40.0%
CCAAGACCTAAAATGTGTCT+TGG - chr2_1:21864073-21864092 Msa0201100:intron 40.0%
!! CTCTACAAAACTGGCTTGTA+AGG - chr2_1:21864140-21864159 Msa0201100:intron 40.0%
AGGTCGAACCTCAATCTAAA+AGG - chr2_1:21864259-21864278 Msa0201100:intron 40.0%
ACACTACTTACCACTATGCT+AGG - chr2_1:21864290-21864309 Msa0201100:intron 40.0%
TAAAACAACCAGGCATAAGG+TGG + chr2_1:21864395-21864414 None:intergenic 40.0%
TTCAGCTGTGAACTTAGTTC+TGG + chr2_1:21864518-21864537 None:intergenic 40.0%
TTATTCTGCACTCAAGAGGA+TGG - chr2_1:21864547-21864566 Msa0201100:CDS 40.0%
CAACATTAATGAGTGGAGCA+GGG - chr2_1:21864594-21864613 Msa0201100:CDS 40.0%
TGTTAAGTGAGACATTGCCA+TGG + chr2_1:21864627-21864646 None:intergenic 40.0%
GGCAATGTCTCACTTAACAA+AGG - chr2_1:21864628-21864647 Msa0201100:CDS 40.0%
CAACGTATGAGGATTTGAAC+AGG - chr2_1:21864732-21864751 Msa0201100:CDS 40.0%
GTATGAGGATTTGAACAGGT+GGG - chr2_1:21864736-21864755 Msa0201100:CDS 40.0%
ATGTGCTAGACGATGATATC+TGG - chr2_1:21864809-21864828 Msa0201100:CDS 40.0%
TGTGCTAGACGATGATATCT+GGG - chr2_1:21864810-21864829 Msa0201100:CDS 40.0%
CTTATGCTGCAAGCTGTAAT+AGG - chr2_1:21865198-21865217 Msa0201100:five_prime_UTR 40.0%
AGAGAACTCGATAGAAGCTG+CGG - chr2_1:21862973-21862992 Msa0201100:three_prime_UTR 45.0%
! ATCTGTTTGGGGTTATGTCG+AGG - chr2_1:21863030-21863049 Msa0201100:three_prime_UTR 45.0%
!! GAACAAGTTGGTTTCCCACT+TGG - chr2_1:21863182-21863201 Msa0201100:three_prime_UTR 45.0%
!! TTCCCACTTGGTGTCGTTAA+AGG - chr2_1:21863194-21863213 Msa0201100:three_prime_UTR 45.0%
TGCCTTTAACGACACCAAGT+GGG + chr2_1:21863199-21863218 None:intergenic 45.0%
ATGCCTTTAACGACACCAAG+TGG + chr2_1:21863200-21863219 None:intergenic 45.0%
! GTGTCGTTAAAGGCATAGCT+GGG - chr2_1:21863204-21863223 Msa0201100:three_prime_UTR 45.0%
CATGGACATTGGAACAGTTC+CGG + chr2_1:21863370-21863389 None:intergenic 45.0%
ACTCTTCAGGATGTTTGCAG+AGG + chr2_1:21863443-21863462 None:intergenic 45.0%
TGCAACGACCATCGTAAGAA+AGG + chr2_1:21863467-21863486 None:intergenic 45.0%
TAGTAATGTCATTCCAGGCC+AGG - chr2_1:21863560-21863579 Msa0201100:intron 45.0%
! TTGGAAATTTGTCGCTTGCC+TGG + chr2_1:21863581-21863600 None:intergenic 45.0%
GTTGCAGGTTACATATACCG+TGG - chr2_1:21863683-21863702 Msa0201100:three_prime_UTR 45.0%
GAGGGAGTAACAGAAAAGTC+AGG - chr2_1:21863892-21863911 Msa0201100:intron 45.0%
AACTAGCATGCCTAGCATAG+TGG + chr2_1:21864303-21864322 None:intergenic 45.0%
! TTGTTGGTGGGCCTAAAGTA+AGG - chr2_1:21864362-21864381 Msa0201100:intron 45.0%
TGGGCCTAAAGTAAGGACTT+GGG - chr2_1:21864369-21864388 Msa0201100:intron 45.0%
CAGCTTATTCTGCACTCAAG+AGG - chr2_1:21864543-21864562 Msa0201100:CDS 45.0%
CCTGCTCCACTCATTAATGT+TGG + chr2_1:21864596-21864615 None:intergenic 45.0%
CCAACATTAATGAGTGGAGC+AGG - chr2_1:21864593-21864612 Msa0201100:CDS 45.0%
CGTATGAGGATTTGAACAGG+TGG - chr2_1:21864735-21864754 Msa0201100:CDS 45.0%
CATAAGTCACTCTCCACAAG+AGG - chr2_1:21864786-21864805 Msa0201100:CDS 45.0%
AGAGAACTCGATAGAAGCTG+CGG - chr2_1:21862973-21862992 Msa0201100:three_prime_UTR 45.0%
! ATCTGTTTGGGGTTATGTCG+AGG - chr2_1:21863030-21863049 Msa0201100:three_prime_UTR 45.0%
!! GAACAAGTTGGTTTCCCACT+TGG - chr2_1:21863182-21863201 Msa0201100:three_prime_UTR 45.0%
!! TTCCCACTTGGTGTCGTTAA+AGG - chr2_1:21863194-21863213 Msa0201100:three_prime_UTR 45.0%
TGCCTTTAACGACACCAAGT+GGG + chr2_1:21863199-21863218 None:intergenic 45.0%
ATGCCTTTAACGACACCAAG+TGG + chr2_1:21863200-21863219 None:intergenic 45.0%
! GTGTCGTTAAAGGCATAGCT+GGG - chr2_1:21863204-21863223 Msa0201100:three_prime_UTR 45.0%
CATGGACATTGGAACAGTTC+CGG + chr2_1:21863370-21863389 None:intergenic 45.0%
ACTCTTCAGGATGTTTGCAG+AGG + chr2_1:21863443-21863462 None:intergenic 45.0%
TGCAACGACCATCGTAAGAA+AGG + chr2_1:21863467-21863486 None:intergenic 45.0%
TAGTAATGTCATTCCAGGCC+AGG - chr2_1:21863560-21863579 Msa0201100:intron 45.0%
! TTGGAAATTTGTCGCTTGCC+TGG + chr2_1:21863581-21863600 None:intergenic 45.0%
GTTGCAGGTTACATATACCG+TGG - chr2_1:21863683-21863702 Msa0201100:three_prime_UTR 45.0%
GAGGGAGTAACAGAAAAGTC+AGG - chr2_1:21863892-21863911 Msa0201100:intron 45.0%
AACTAGCATGCCTAGCATAG+TGG + chr2_1:21864303-21864322 None:intergenic 45.0%
! TTGTTGGTGGGCCTAAAGTA+AGG - chr2_1:21864362-21864381 Msa0201100:intron 45.0%
TGGGCCTAAAGTAAGGACTT+GGG - chr2_1:21864369-21864388 Msa0201100:intron 45.0%
CAGCTTATTCTGCACTCAAG+AGG - chr2_1:21864543-21864562 Msa0201100:CDS 45.0%
CCTGCTCCACTCATTAATGT+TGG + chr2_1:21864596-21864615 None:intergenic 45.0%
CCAACATTAATGAGTGGAGC+AGG - chr2_1:21864593-21864612 Msa0201100:CDS 45.0%
CGTATGAGGATTTGAACAGG+TGG - chr2_1:21864735-21864754 Msa0201100:CDS 45.0%
CATAAGTCACTCTCCACAAG+AGG - chr2_1:21864786-21864805 Msa0201100:CDS 45.0%
CTGCAGCTTCACATTGAGCA+GGG - chr2_1:21863149-21863168 Msa0201100:three_prime_UTR 50.0%
GGTCCTGTGCTTGAACAAGT+TGG - chr2_1:21863170-21863189 Msa0201100:three_prime_UTR 50.0%
!! GGTGTCGTTAAAGGCATAGC+TGG - chr2_1:21863203-21863222 Msa0201100:three_prime_UTR 50.0%
AGCTGGGCAGACAAGATTGA+AGG - chr2_1:21863220-21863239 Msa0201100:three_prime_UTR 50.0%
GTCACGGTTAAAGGCTCACA+AGG - chr2_1:21863339-21863358 Msa0201100:three_prime_UTR 50.0%
AAAGGCTCACAAGGTCATGC+CGG - chr2_1:21863348-21863367 Msa0201100:three_prime_UTR 50.0%
GGATCTTGACGCATGGACAT+TGG + chr2_1:21863381-21863400 None:intergenic 50.0%
GTCCATGCGTCAAGATCCTA+TGG - chr2_1:21863383-21863402 Msa0201100:three_prime_UTR 50.0%
CACCATAGGATCTTGACGCA+TGG + chr2_1:21863388-21863407 None:intergenic 50.0%
CATGCGTCAAGATCCTATGG+TGG - chr2_1:21863386-21863405 Msa0201100:three_prime_UTR 50.0%
GGCAGAGAGACCTTACAAAC+CGG + chr2_1:21863966-21863985 None:intergenic 50.0%
!! CAAAACTGGCTTGTAAGGCG+AGG - chr2_1:21864145-21864164 Msa0201100:intron 50.0%
GTGGGCCTAAAGTAAGGACT+TGG - chr2_1:21864368-21864387 Msa0201100:intron 50.0%
GTGGCCCAAGTCCTTACTTT+AGG + chr2_1:21864376-21864395 None:intergenic 50.0%
TGTTCACCTCAGCATGATGC+AGG - chr2_1:21864476-21864495 Msa0201100:CDS 50.0%
TTCTGCACTCAAGAGGATGG+AGG - chr2_1:21864550-21864569 Msa0201100:CDS 50.0%
TCTGCACTCAAGAGGATGGA+GGG - chr2_1:21864551-21864570 Msa0201100:CDS 50.0%
! ATGCTGTTTGTGCGATGTCG+CGG - chr2_1:21864760-21864779 Msa0201100:CDS 50.0%
TCGTCTAGCACATCCTCTTG+TGG + chr2_1:21864802-21864821 None:intergenic 50.0%
GCTAGACGATGATATCTGGG+CGG - chr2_1:21864813-21864832 Msa0201100:CDS 50.0%
!! TTGGTTGGCCTCCTCTTGAT+AGG + chr2_1:21865017-21865036 None:intergenic 50.0%
CTGCAGCTTCACATTGAGCA+GGG - chr2_1:21863149-21863168 Msa0201100:three_prime_UTR 50.0%
GGTCCTGTGCTTGAACAAGT+TGG - chr2_1:21863170-21863189 Msa0201100:three_prime_UTR 50.0%
!! GGTGTCGTTAAAGGCATAGC+TGG - chr2_1:21863203-21863222 Msa0201100:three_prime_UTR 50.0%
AGCTGGGCAGACAAGATTGA+AGG - chr2_1:21863220-21863239 Msa0201100:three_prime_UTR 50.0%
GTCACGGTTAAAGGCTCACA+AGG - chr2_1:21863339-21863358 Msa0201100:three_prime_UTR 50.0%
AAAGGCTCACAAGGTCATGC+CGG - chr2_1:21863348-21863367 Msa0201100:three_prime_UTR 50.0%
GGATCTTGACGCATGGACAT+TGG + chr2_1:21863381-21863400 None:intergenic 50.0%
GTCCATGCGTCAAGATCCTA+TGG - chr2_1:21863383-21863402 Msa0201100:three_prime_UTR 50.0%
CACCATAGGATCTTGACGCA+TGG + chr2_1:21863388-21863407 None:intergenic 50.0%
CATGCGTCAAGATCCTATGG+TGG - chr2_1:21863386-21863405 Msa0201100:three_prime_UTR 50.0%
GGCAGAGAGACCTTACAAAC+CGG + chr2_1:21863966-21863985 None:intergenic 50.0%
!! CAAAACTGGCTTGTAAGGCG+AGG - chr2_1:21864145-21864164 Msa0201100:intron 50.0%
GTGGGCCTAAAGTAAGGACT+TGG - chr2_1:21864368-21864387 Msa0201100:intron 50.0%
GTGGCCCAAGTCCTTACTTT+AGG + chr2_1:21864376-21864395 None:intergenic 50.0%
TGTTCACCTCAGCATGATGC+AGG - chr2_1:21864476-21864495 Msa0201100:CDS 50.0%
TTCTGCACTCAAGAGGATGG+AGG - chr2_1:21864550-21864569 Msa0201100:CDS 50.0%
TCTGCACTCAAGAGGATGGA+GGG - chr2_1:21864551-21864570 Msa0201100:CDS 50.0%
! ATGCTGTTTGTGCGATGTCG+CGG - chr2_1:21864760-21864779 Msa0201100:CDS 50.0%
TCGTCTAGCACATCCTCTTG+TGG + chr2_1:21864802-21864821 None:intergenic 50.0%
GCTAGACGATGATATCTGGG+CGG - chr2_1:21864813-21864832 Msa0201100:CDS 50.0%
!! TTGGTTGGCCTCCTCTTGAT+AGG + chr2_1:21865017-21865036 None:intergenic 50.0%
GAACTCGATAGAAGCTGCGG+AGG - chr2_1:21862976-21862995 Msa0201100:three_prime_UTR 55.0%
GCTGCAGCTTCACATTGAGC+AGG - chr2_1:21863148-21863167 Msa0201100:three_prime_UTR 55.0%
TGTTCAGCAGCAGCCACCAT+AGG + chr2_1:21863402-21863421 None:intergenic 55.0%
! AATTTGTCGCTTGCCTGGCC+TGG + chr2_1:21863576-21863595 None:intergenic 55.0%
TGTGGCTTCTGTTCCAGCAG+AGG - chr2_1:21864239-21864258 Msa0201100:intron 55.0%
GATTGAGGTTCGACCTCTGC+TGG + chr2_1:21864255-21864274 None:intergenic 55.0%
ACAGCACCTGCATCATGCTG+AGG + chr2_1:21864485-21864504 None:intergenic 55.0%
GAACTCGATAGAAGCTGCGG+AGG - chr2_1:21862976-21862995 Msa0201100:three_prime_UTR 55.0%
GCTGCAGCTTCACATTGAGC+AGG - chr2_1:21863148-21863167 Msa0201100:three_prime_UTR 55.0%
TGTTCAGCAGCAGCCACCAT+AGG + chr2_1:21863402-21863421 None:intergenic 55.0%
! AATTTGTCGCTTGCCTGGCC+TGG + chr2_1:21863576-21863595 None:intergenic 55.0%
TGTGGCTTCTGTTCCAGCAG+AGG - chr2_1:21864239-21864258 Msa0201100:intron 55.0%
GATTGAGGTTCGACCTCTGC+TGG + chr2_1:21864255-21864274 None:intergenic 55.0%
ACAGCACCTGCATCATGCTG+AGG + chr2_1:21864485-21864504 None:intergenic 55.0%
GACTTGGGCCACCTTATGCC+TGG - chr2_1:21864384-21864403 Msa0201100:intron 60.0%
TGGAGCAGGGCATGATGCCA+TGG - chr2_1:21864607-21864626 Msa0201100:CDS 60.0%
CTGTTTGTGCGATGTCGCGG+AGG - chr2_1:21864763-21864782 Msa0201100:CDS 60.0%
GACGATGATATCTGGGCGGC+TGG - chr2_1:21864817-21864836 Msa0201100:CDS 60.0%
GACTTGGGCCACCTTATGCC+TGG - chr2_1:21864384-21864403 Msa0201100:intron 60.0%
TGGAGCAGGGCATGATGCCA+TGG - chr2_1:21864607-21864626 Msa0201100:CDS 60.0%
CTGTTTGTGCGATGTCGCGG+AGG - chr2_1:21864763-21864782 Msa0201100:CDS 60.0%
GACGATGATATCTGGGCGGC+TGG - chr2_1:21864817-21864836 Msa0201100:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 21862945 21865303 21862945 ID=Msa0201100;Name=Msa0201100
chr2_1 mRNA 21862945 21865303 21862945 ID=Msa0201100-mRNA-1;Parent=Msa0201100;Name=Msa0201100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=219|1|1|1|1|0.8|5|693|156
chr2_1 exon 21862945 21863494 21862945 ID=Msa0201100-mRNA-1:exon:8790;Parent=Msa0201100-mRNA-1
chr2_1 exon 21863599 21863760 21863599 ID=Msa0201100-mRNA-1:exon:8789;Parent=Msa0201100-mRNA-1
chr2_1 exon 21864433 21864909 21864433 ID=Msa0201100-mRNA-1:exon:8788;Parent=Msa0201100-mRNA-1
chr2_1 exon 21865007 21865093 21865007 ID=Msa0201100-mRNA-1:exon:8787;Parent=Msa0201100-mRNA-1
chr2_1 exon 21865197 21865303 21865197 ID=Msa0201100-mRNA-1:exon:8786;Parent=Msa0201100-mRNA-1
chr2_1 five_prime_UTR 21865197 21865303 21865197 ID=Msa0201100-mRNA-1:five_prime_utr;Parent=Msa0201100-mRNA-1
chr2_1 five_prime_UTR 21865007 21865093 21865007 ID=Msa0201100-mRNA-1:five_prime_utr;Parent=Msa0201100-mRNA-1
chr2_1 five_prime_UTR 21864885 21864909 21864885 ID=Msa0201100-mRNA-1:five_prime_utr;Parent=Msa0201100-mRNA-1
chr2_1 CDS 21864433 21864884 21864433 ID=Msa0201100-mRNA-1:cds;Parent=Msa0201100-mRNA-1
chr2_1 CDS 21863742 21863760 21863742 ID=Msa0201100-mRNA-1:cds;Parent=Msa0201100-mRNA-1
chr2_1 three_prime_UTR 21863599 21863741 21863599 ID=Msa0201100-mRNA-1:three_prime_utr;Parent=Msa0201100-mRNA-1
chr2_1 three_prime_UTR 21862945 21863494 21862945 ID=Msa0201100-mRNA-1:three_prime_utr;Parent=Msa0201100-mRNA-1
Gene Sequence

>Msa0201100

ATGCCGGAACTGTTCCAATGTCCATGCGTCAAGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCTGAAGAGTACCTTTCTTACGATGGTCGTTGCAGTGATTCATCGATTAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGCCAGGCAAGCGACAAATTTCCAAAAAGCTGTTGATCTGGTGATCTTCAAGTGGATATGTTTTTTGCTTTCTCAAATTGAAGCTTGTGATGATAATGTGATGATTGGTTGCAGGTTACATATACCGTGGATATACGAGCAATTGATGATACAGGACGTGAGGCTGTTATCTATGATTTATCCAATCGAATTTATCAGATATGTGACAAGCGTTCAGTTTCCTGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGA
Protein sequence

>Msa0201100

MPELFQCPCVKILWWLLLNKLYLWKASANILKSTFLTMVVAVIHRLNHFQVHLFVLLVKYQHGQVLVMSFQARQATNFQKAVDLVIFKWICFLLSQIEACDDNVMIGCRLHIPWIYEQLMIQDVRLLSMIYPIEFIRYVTSVQFPALLNTSMMQVL*