AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166450 MtrunA17_Chr7g0268621 92.573 377 9 3 1 358 1 377 0.0 706
Msa1166450 MtrunA17_Chr7g0268611 66.667 369 104 3 6 355 8 376 1.13e-180 506
Msa1166450 MtrunA17_Chr3g0125701 47.594 374 175 5 3 356 4 376 1.17e-119 351
Msa1166450 MtrunA17_Chr3g0125711 47.059 374 177 5 3 356 4 376 2.02e-118 348
Msa1166450 MtrunA17_Chr3g0125691 47.059 374 177 5 3 356 4 376 1.92e-117 346
Msa1166450 MtrunA17_Chr8g0350371 45.455 374 185 3 1 355 1 374 1.17e-116 343
Msa1166450 MtrunA17_Chr5g0412881 46.257 374 182 3 1 355 1 374 8.31e-116 341
Msa1166450 MtrunA17_Chr1g0182991 44.063 379 185 5 7 361 26 401 3.87e-109 325
Msa1166450 MtrunA17_Chr7g0262591 44.327 379 180 7 7 361 25 396 3.38e-108 323
Msa1166450 MtrunA17_Chr3g0139441 45.067 375 181 5 7 357 40 413 3.45e-107 320
Msa1166450 MtrunA17_Chr1g0169111 45.333 375 179 6 7 356 103 476 4.13e-107 323
Msa1166450 MtrunA17_Chr1g0147221 45.040 373 179 6 7 355 43 413 1.54e-103 311
Msa1166450 MtrunA17_Chr6g0485621 44.681 376 180 8 7 355 33 407 2.88e-103 310
Msa1166450 MtrunA17_Chr1g0148801 42.091 373 188 7 7 356 17 384 7.81e-103 309
Msa1166450 MtrunA17_Chr7g0262471 40.764 314 158 7 67 361 213 517 2.54e-71 231
Msa1166450 MtrunA17_Chr4g0025641 45.320 203 93 2 3 187 13 215 4.05e-53 175
Msa1166450 MtrunA17_Chr4g0025651 44.382 178 96 3 187 362 1 177 1.23e-46 157
Msa1166450 MtrunA17_Chr3g0129991 38.462 117 54 2 66 164 3 119 1.56e-18 80.5
Msa1166450 MtrunA17_Chr3g0130001 58.140 43 18 0 1 43 1 43 1.51e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166450 AT1G48910.1 46.505 372 180 3 3 355 2 373 2.09e-121 355
Msa1166450 AT1G21430.1 45.722 374 179 5 6 358 9 379 1.38e-110 328
Msa1166450 AT5G43890.1 43.117 385 190 6 7 363 26 409 1.62e-107 322
Msa1166450 AT1G04610.1 44.947 376 180 6 7 356 38 412 2.09e-107 322
Msa1166450 AT1G04180.1 43.750 384 186 6 7 363 26 406 2.74e-106 318
Msa1166450 AT4G13260.1 43.968 373 184 6 7 355 29 400 4.25e-105 315
Msa1166450 AT5G25620.1 44.267 375 180 7 7 355 33 404 1.54e-104 314
Msa1166450 AT5G25620.2 44.267 375 180 7 7 355 33 404 2.01e-104 314
Msa1166450 AT4G28720.1 42.667 375 188 7 7 355 26 399 2.64e-104 313
Msa1166450 AT4G32540.1 40.909 374 191 5 7 356 22 389 2.13e-96 293
Msa1166450 AT4G32540.2 41.333 375 190 5 7 356 22 391 3.23e-96 293
Msa1166450 AT5G11320.1 41.555 373 188 6 7 356 18 383 5.92e-96 291
Msa1166450 AT2G33230.1 43.617 376 184 7 7 356 33 406 1.40e-95 291
Msa1166450 AT5G11320.2 41.796 323 158 6 7 306 18 333 2.86e-80 249
Msa1166450 AT4G13260.2 45.035 282 132 4 7 265 29 310 3.09e-80 248
Msa1166450 AT4G13260.3 39.863 291 155 5 84 355 8 297 2.56e-67 215

Find 183 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCAACCCTTCAATTTC+AGG 0.149369 7_4:-58552064 None:intergenic
TCTAGGGATATGATGTATTA+TGG 0.157138 7_4:+58546827 Msa1166450:CDS
GTCAAGTGGCATGCTGAATT+TGG 0.205508 7_4:+58553009 Msa1166450:three_prime_UTR
GTTGTTGGTTCTGGTAATTC+TGG 0.206192 7_4:+58545754 Msa1166450:CDS
GTACTTGACCTTCATATAAA+AGG 0.212639 7_4:-58553149 None:intergenic
TACGGAGATGTCACAAATTA+TGG 0.238324 7_4:+58553103 Msa1166450:three_prime_UTR
GTTGTTGGGTCTGGAAATTC+TGG 0.242416 7_4:+58552157 Msa1166450:three_prime_UTR
AAACAGTTCATAGAATATTT+AGG 0.244234 7_4:+58545457 Msa1166450:intron
CATGTTCTTGTTGTTGGTTC+TGG 0.258207 7_4:+58545745 Msa1166450:CDS
ACAGTTCCCACGTCAATTAT+AGG 0.258397 7_4:-58546998 None:intergenic
GTTGTTGGAGCAGGCCCTTC+TGG 0.258715 7_4:+58551653 Msa1166450:three_prime_UTR
TCAAGAGATCAACTCATAAA+TGG 0.262238 7_4:+58547467 Msa1166450:CDS
GATGGTGATGCTTAGTAAAA+TGG 0.287383 7_4:+58553078 Msa1166450:three_prime_UTR
TCAAGTGGCATGCTGAATTT+GGG 0.297595 7_4:+58553010 Msa1166450:three_prime_UTR
GGTGAAGTTGAGGAGTATTC+TGG 0.306966 7_4:+58545592 Msa1166450:CDS
AATTAAGTCTCAAGAGTTAA+AGG 0.323090 7_4:+58553210 Msa1166450:three_prime_UTR
TCAACAGCTCTGTTGTATAT+AGG 0.326418 7_4:-58545508 None:intergenic
GGAGTATTCTGGAAGATTCT+TGG 0.331314 7_4:+58545603 Msa1166450:CDS
TCTCTTTCGAGGATTGTATA+AGG 0.332947 7_4:-58551713 None:intergenic
TATGGAGATTGCTTTAGATT+TGG 0.339070 7_4:+58545777 Msa1166450:CDS
TTCTTTCCCTTCCAATGAAT+GGG 0.339539 7_4:-58555421 None:intergenic
CTAGGGATATGATGTATTAT+GGG 0.339983 7_4:+58546828 Msa1166450:CDS
GAAGGTGAAGGCTATGAATA+AGG 0.342960 7_4:+58551967 Msa1166450:three_prime_UTR
CATGTTCTTGTTGTTGGGTC+TGG 0.344499 7_4:+58552148 Msa1166450:three_prime_UTR
CTTGCCATACTTCATCTTCA+TGG 0.350512 7_4:-58546972 None:intergenic
AAGTATAAGCTTCAAACATA+TGG 0.353044 7_4:+58555686 Msa1166450:three_prime_UTR
GATGAGCATGTTCTTGTTGT+TGG 0.358206 7_4:+58545739 Msa1166450:CDS
CAACAGCTCTGTTGTATATA+GGG 0.358349 7_4:-58545507 None:intergenic
CATTCAACTGGGTTTAAGAA+TGG 0.361675 7_4:+58552106 Msa1166450:three_prime_UTR
ACATATATCAATTTCTTTGA+CGG 0.365198 7_4:-58555821 None:intergenic
AATGAAAGAGTAATAGTTGT+TGG 0.373568 7_4:+58551638 Msa1166450:three_prime_UTR
GATGAACATGTTCTTGTTGT+TGG 0.376175 7_4:+58552142 Msa1166450:three_prime_UTR
ATGCTTAGTAAAATGGTTTA+CGG 0.376808 7_4:+58553085 Msa1166450:three_prime_UTR
ATTCTTTCCCTTCCAATGAA+TGG 0.379709 7_4:-58555422 None:intergenic
AAGCGCAAGTGTAAATATAT+AGG 0.381462 7_4:-58551516 None:intergenic
AGCCAAGTTACCCCATTCAT+TGG 0.391009 7_4:+58555410 Msa1166450:three_prime_UTR
ATCTACCCACAAATGGCTTA+AGG 0.395665 7_4:+58555072 Msa1166450:three_prime_UTR
GCTTTAGATTTGGCTAACTT+TGG 0.396250 7_4:+58545787 Msa1166450:CDS
GGGAAAGTGATTCATTCAAC+TGG 0.397373 7_4:+58552094 Msa1166450:three_prime_UTR
ATGATGAAGGTTCTGAGAAA+TGG 0.397382 7_4:+58551945 Msa1166450:three_prime_UTR
TTCCAATGAATGGGGTAACT+TGG 0.399943 7_4:-58555412 None:intergenic
CCTTCAATTTCAGGTACAAA+AGG 0.400011 7_4:-58552055 None:intergenic
CTATCAAGGAGAGGTTTCTA+TGG 0.400558 7_4:+58555463 Msa1166450:three_prime_UTR
AAGGTTCCAACGTCAATAAT+AGG 0.402511 7_4:-58553181 None:intergenic
ACTGTCAAGAAAATCAAATC+TGG 0.404277 7_4:+58547016 Msa1166450:CDS
GAAACCAGTGCAGAAAATAA+TGG 0.408371 7_4:-58547446 None:intergenic
ATTCAACTGGGTTTAAGAAT+GGG 0.409379 7_4:+58552107 Msa1166450:three_prime_UTR
CAGAAAATAATGGAGTCAAA+TGG 0.413696 7_4:-58547436 None:intergenic
TTCACCATGAAGATGAAGTA+TGG 0.415407 7_4:+58546968 Msa1166450:CDS
TTGTCTATAATAATAATAGA+TGG 0.416196 7_4:+58551568 Msa1166450:three_prime_UTR
AGTATAAGCTTCAAACATAT+GGG 0.421207 7_4:+58555687 Msa1166450:three_prime_UTR
ATCAACTCATAAATGGCTTA+AGG 0.422879 7_4:+58547474 Msa1166450:CDS
AAAGCTGAGAATAAGAGTTC+TGG 0.427642 7_4:+58545571 Msa1166450:CDS
GCAAGCTGCCGTGGCTAGGC+CGG 0.428176 7_4:-58545269 None:intergenic
AATCAAATCTGGAGAAATAC+AGG 0.435570 7_4:+58547027 Msa1166450:CDS
TTCTGGAATGGAAATTGCAT+TGG 0.445243 7_4:+58552174 Msa1166450:three_prime_UTR
TCCAAACCTTAAGCCATTTG+TGG 0.447999 7_4:-58555078 None:intergenic
CATATAAAAGGGACCCTCGC+TGG 0.449889 7_4:-58553137 None:intergenic
TGTATTGTGTTGGACTATCA+AGG 0.452297 7_4:+58555449 Msa1166450:three_prime_UTR
TATGGAGATCTGAGCAAATA+TGG 0.453306 7_4:+58546920 Msa1166450:CDS
ATGAATGGGGTAACTTGGCT+TGG 0.456277 7_4:-58555407 None:intergenic
ACTTCATCTTCATGGTGAAC+GGG 0.456709 7_4:-58546964 None:intergenic
GAAGCACCGGTGATAATAAT+CGG 0.458478 7_4:+58545235 Msa1166450:CDS
AAGGCTATGAATAAGGATTC+CGG 0.459058 7_4:+58551974 Msa1166450:three_prime_UTR
TGAGGATAAGAAGGTGGAAA+AGG 0.459298 7_4:-58545421 None:intergenic
AGAAAATAATGGAGTCAAAT+GGG 0.459670 7_4:-58547435 None:intergenic
TTAAGCAAGCTGCCGTGGCT+AGG 0.460122 7_4:-58545273 None:intergenic
TGGTATGGTAAACCAGGCTT+TGG 0.460923 7_4:-58548341 None:intergenic
ATAATCGGAGCTGGAACATC+CGG 0.461025 7_4:+58545250 Msa1166450:CDS
AGTTGAATGAATCACTTTCC+CGG 0.461841 7_4:-58552092 None:intergenic
AAGAATGGTTTGTATTGTGT+TGG 0.466251 7_4:+58555439 Msa1166450:three_prime_UTR
TAAGGATTCCGGTGAGGTTG+AGG 0.466347 7_4:+58551985 Msa1166450:three_prime_UTR
ATGAACATGTTCTTGTTGTT+GGG 0.471420 7_4:+58552143 Msa1166450:three_prime_UTR
TACTTGACCTTCATATAAAA+GGG 0.473078 7_4:-58553148 None:intergenic
TGGTTCTGGTAATTCTGGTA+TGG 0.475788 7_4:+58545759 Msa1166450:CDS
ATGTTGATGATGATGAGAAA+TGG 0.476343 7_4:+58545542 Msa1166450:CDS
CCAAACCTTAAGCCATTTGT+GGG 0.476994 7_4:-58555077 None:intergenic
CTGCGTTGGGTTGTCAAGGA+GGG 0.478723 7_4:+58548388 Msa1166450:CDS
CCTCGTGTACCTGAGGTTGA+AGG 0.480789 7_4:+58545652 Msa1166450:CDS
TTCGAGGATTGTATAAGGAA+TGG 0.481468 7_4:-58551708 None:intergenic
TTCAATCATTGTTAGAAGCC+CGG 0.486770 7_4:+58545819 Msa1166450:CDS
TTCTTACCCTTCCAATGGTA+TGG 0.487301 7_4:-58548356 None:intergenic
TAAGAGTTCTGGTGAAGTTG+AGG 0.487568 7_4:+58545582 Msa1166450:CDS
TTCCATCACGGAACAACACT+TGG 0.488765 7_4:-58547405 None:intergenic
TTCGAGAATGATGAAAGGTA+TGG 0.490300 7_4:-58545305 None:intergenic
GGGCTTCTAACAATGATTGA+AGG 0.491991 7_4:-58545817 None:intergenic
CTTATGCATTCTATTTCTAC+CGG 0.492161 7_4:-58554974 None:intergenic
ATTCATTGGAAGGGAAAGAA+TGG 0.492375 7_4:+58555424 Msa1166450:three_prime_UTR
GAATACCATCATCATTCAAA+AGG 0.492685 7_4:-58555384 None:intergenic
ACTAGTTTCTCCACCGTGCT+TGG 0.493688 7_4:-58546875 None:intergenic
CTCTCCAACCCTTCAACCTC+AGG 0.498735 7_4:-58545661 None:intergenic
TTCATATTCCTCAACCTCAC+CGG 0.503302 7_4:-58551993 None:intergenic
TGCGTTGGGTTGTCAAGGAG+GGG 0.503567 7_4:+58548389 Msa1166450:CDS
TTCAATCGTTGTTCGAAGCA+AGG 0.504367 7_4:+58552222 Msa1166450:three_prime_UTR
GGTACATAGTGAGGATAAGA+AGG 0.504694 7_4:-58545430 None:intergenic
TGAATGGGGTAACTTGGCTT+GGG 0.505766 7_4:-58555406 None:intergenic
CTTATGCTCTCTATTTCTGC+TGG 0.510758 7_4:-58547376 None:intergenic
GCAGAAATAGAGAGCATAAG+TGG 0.510770 7_4:+58547379 Msa1166450:CDS
TCTGATGAAGTATTTGTCAA+TGG 0.510851 7_4:+58553039 Msa1166450:three_prime_UTR
GATGTCACAAATTATGGAGT+TGG 0.515768 7_4:+58553109 Msa1166450:three_prime_UTR
ATATAAAAGGGACCCTCGCT+GGG 0.519555 7_4:-58553136 None:intergenic
TCAAGAGATCTACCCACAAA+TGG 0.521241 7_4:+58555065 Msa1166450:three_prime_UTR
AGCAAATGATATTGCTATGC+TGG 0.521351 7_4:+58548445 Msa1166450:CDS
TACTTCATCTTCATGGTGAA+CGG 0.522181 7_4:-58546965 None:intergenic
ATAGCAAGCAGGATTGTGTA+TGG 0.524380 7_4:+58546902 Msa1166450:CDS
AACGGGCCTTCACTAGGAAA+AGG 0.524492 7_4:-58546947 None:intergenic
AGCCTGGTTTACCATACCAT+TGG 0.525475 7_4:+58548345 Msa1166450:CDS
CTTCAATTTCAGGTACAAAA+GGG 0.526666 7_4:-58552054 None:intergenic
AGGAGAGGTTTCTATGGAGC+TGG 0.527357 7_4:+58555469 Msa1166450:three_prime_UTR
GGAATGTATGATGGAAAAGA+AGG 0.532095 7_4:-58551833 None:intergenic
AGATTCTTGGTTGTTGCTAG+TGG 0.534441 7_4:+58545616 Msa1166450:CDS
TTTACTGCGTTGGGTTGTCA+AGG 0.536045 7_4:+58548384 Msa1166450:CDS
AAGTTACCCCATTCATTGGA+AGG 0.536623 7_4:+58555414 Msa1166450:three_prime_UTR
ATGGTGAACGGGCCTTCACT+AGG 0.550940 7_4:-58546953 None:intergenic
AGAGTAATAGTTGTTGGAGC+AGG 0.551136 7_4:+58551644 Msa1166450:three_prime_UTR
AGGTTGAGGAATATGAAGGA+AGG 0.551335 7_4:+58551999 Msa1166450:three_prime_UTR
ATGTATGATGGAAAAGAAGG+TGG 0.552215 7_4:-58551830 None:intergenic
AATAAGCACTAGTAACAAAA+CGG 0.553856 7_4:+58551485 Msa1166450:exon
GTGGGTAGATCTCTTGAAGC+CGG 0.553863 7_4:-58555059 None:intergenic
GATGGAAAAGAAGGTGGGAA+TGG 0.556044 7_4:-58551824 None:intergenic
CAAGTGGCATGCTGAATTTG+GGG 0.557141 7_4:+58553011 Msa1166450:three_prime_UTR
TAAAATAAAGATCAAAGGAG+AGG 0.557282 7_4:+58555648 Msa1166450:three_prime_UTR
TGGAACATCCGGCCTAGCCA+CGG 0.560221 7_4:+58545261 Msa1166450:CDS
GGATTGTATAAGGAATGGAT+TGG 0.560650 7_4:-58551703 None:intergenic
TCAACGATCACGACGATATG+CGG 0.562313 7_4:-58555586 None:intergenic
AACCGTTCTTACCCTTCCAA+TGG 0.562914 7_4:-58548361 None:intergenic
TGGTTTACCATACCATTGGA+AGG 0.564287 7_4:+58548349 Msa1166450:CDS
AACTAGTGGTGATAGCAAGC+AGG 0.566788 7_4:+58546891 Msa1166450:CDS
CGTTGATTAGATGTCAGTTG+AGG 0.569273 7_4:+58555603 Msa1166450:three_prime_UTR
CTCGTGTACCTGAGGTTGAA+GGG 0.572413 7_4:+58545653 Msa1166450:CDS
CAAGTTTCCTATAATTGACG+TGG 0.574376 7_4:+58546991 Msa1166450:CDS
TAACAGAATGCATGAAGCAC+CGG 0.575824 7_4:+58545222 None:intergenic
TAGGGATATGATGTATTATG+GGG 0.576351 7_4:+58546829 Msa1166450:CDS
CCGGTGATAATAATCGGAGC+TGG 0.577061 7_4:+58545241 Msa1166450:CDS
ACTGCGTTGGGTTGTCAAGG+AGG 0.577065 7_4:+58548387 Msa1166450:CDS
GAGAATGCAGAGTATGATGA+AGG 0.578252 7_4:+58551932 Msa1166450:three_prime_UTR
AACCAAGTGTTGTTCCGTGA+TGG 0.578671 7_4:+58547403 Msa1166450:CDS
GTATTTGTCAATGGAGATGG+TGG 0.579490 7_4:+58553048 Msa1166450:three_prime_UTR
GTAGAAATAGAATGCATAAG+TGG 0.579593 7_4:+58554977 Msa1166450:three_prime_UTR
TAACTATCTGTCACCAAGCA+CGG 0.580671 7_4:+58546862 Msa1166450:CDS
CCAGCTCCGATTATTATCAC+CGG 0.581468 7_4:-58545241 None:intergenic
AATAATGGAGTCAAATGGGT+AGG 0.582608 7_4:-58547431 None:intergenic
GGAAAGTGATTCATTCAACT+GGG 0.587347 7_4:+58552095 Msa1166450:three_prime_UTR
ATCTATTATTATTATAGACA+AGG 0.588358 7_4:-58551566 None:intergenic
TTCCAATGGTATGGTAAACC+AGG 0.588965 7_4:-58548347 None:intergenic
GAAGGTGGAAAAGGAAAGTG+TGG 0.589595 7_4:-58545412 None:intergenic
ATTTATAAAATAAAGATCAA+AGG 0.590359 7_4:+58555643 Msa1166450:three_prime_UTR
TGTATGATGGAAAAGAAGGT+GGG 0.596307 7_4:-58551829 None:intergenic
GAAGTATTTGTCAATGGAGA+TGG 0.597497 7_4:+58553045 Msa1166450:three_prime_UTR
AGTTACCCCATTCATTGGAA+GGG 0.599221 7_4:+58555415 Msa1166450:three_prime_UTR
TGGGTCTGGAAATTCTGGAA+TGG 0.600936 7_4:+58552162 Msa1166450:three_prime_UTR
GCTGCTACTGAGAGACCAGA+AGG 0.602816 7_4:-58551668 None:intergenic
GAAGGTGGGAATGGTTTGTG+AGG 0.606122 7_4:-58551815 None:intergenic
GGTGAGGTTGAGGAATATGA+AGG 0.608479 7_4:+58551995 Msa1166450:three_prime_UTR
ACATAGTGAGGATAAGAAGG+TGG 0.610879 7_4:-58545427 None:intergenic
AGCTGAACCTCGTGTACCTG+AGG 0.611922 7_4:+58545645 Msa1166450:CDS
TGTGTTGGACTATCAAGGAG+AGG 0.616154 7_4:+58555454 Msa1166450:three_prime_UTR
TCACAAATTATGGAGTTGGT+AGG 0.617407 7_4:+58553113 Msa1166450:three_prime_UTR
TCCACTGTTCTGTGATACAG+AGG 0.617971 7_4:-58551911 None:intergenic
AGGTTTCTATGGAGCTGGTG+CGG 0.619956 7_4:+58555474 Msa1166450:three_prime_UTR
GGAGATGGTGGATTCAATGA+TGG 0.623038 7_4:+58553060 Msa1166450:three_prime_UTR
TTCTGAGAAATGGAAGGTGA+AGG 0.623363 7_4:+58551955 Msa1166450:three_prime_UTR
TCTTTCCCTTCCAATGAATG+GGG 0.623661 7_4:-58555420 None:intergenic
TCTCTTTCGAGAATGATGAA+AGG 0.630107 7_4:-58545310 None:intergenic
GGTTTACCATACCATTGGAA+GGG 0.632374 7_4:+58548350 Msa1166450:CDS
TTGATGATGATGAGAAATGG+AGG 0.634704 7_4:+58545545 Msa1166450:CDS
GCATTGGATCTTATCAACCA+TGG 0.635858 7_4:+58552190 Msa1166450:three_prime_UTR
GGAGTTGGTAGGCCCAGCGA+GGG 0.635996 7_4:+58553124 Msa1166450:three_prime_UTR
TACCATTGGAAGGGTAAGAA+CGG 0.636293 7_4:+58548359 Msa1166450:CDS
AAGTATCCTATTATTGACGT+TGG 0.642218 7_4:+58553175 Msa1166450:three_prime_UTR
ATGAAGATGAACACGATCGT+AGG 0.646942 7_4:-58545365 None:intergenic
CTGCTACTGAGAGACCAGAA+GGG 0.656151 7_4:-58551667 None:intergenic
GTATAAGCTTCAAACATATG+GGG 0.660534 7_4:+58555688 Msa1166450:three_prime_UTR
AAGTTTCCTATAATTGACGT+GGG 0.672849 7_4:+58546992 Msa1166450:CDS
CCTTCAACCTCAGGTACACG+AGG 0.674313 7_4:-58545652 None:intergenic
TGGAGTTGGTAGGCCCAGCG+AGG 0.683293 7_4:+58553123 Msa1166450:three_prime_UTR
TGAAGGTTCTGAGAAATGGA+AGG 0.688803 7_4:+58551949 Msa1166450:three_prime_UTR
TCCTCTGTATCACAGAACAG+TGG 0.693621 7_4:+58551910 Msa1166450:three_prime_UTR
AGGGATATGATGTATTATGG+GGG 0.700343 7_4:+58546830 Msa1166450:CDS
TGATGATGATGAGAAATGGA+GGG 0.722234 7_4:+58545546 Msa1166450:CDS
TATGAATAAGGATTCCGGTG+AGG 0.731006 7_4:+58551979 Msa1166450:three_prime_UTR
CTATCTGTCACCAAGCACGG+TGG 0.746358 7_4:+58546865 Msa1166450:CDS
AAGCACGGTGGAGAAACTAG+TGG 0.756921 7_4:+58546877 Msa1166450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTGTATATATGT+AGG + chr7_4:58547348-58547367 Msa1166450:intron 10.0%
!!! ATTAGAAAAAAGTATATAAA+TGG - chr7_4:58547848-58547867 None:intergenic 10.0%
!!! CATAATTTTATTGATAATTT+AGG + chr7_4:58548626-58548645 Msa1166450:intron 10.0%
!!! TTTTTGCTTATATTTTATTT+TGG + chr7_4:58549193-58549212 Msa1166450:intron 10.0%
!! CAATAAAAAATAATCATAAA+AGG - chr7_4:58549845-58549864 None:intergenic 10.0%
!!! TAATTTTTTTATGGTTTTTT+AGG - chr7_4:58550746-58550765 None:intergenic 10.0%
!!! GCTTTTATATAATTTTTTTA+TGG - chr7_4:58550755-58550774 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+GGG - chr7_4:58550874-58550893 None:intergenic 10.0%
!!! GTTTTTTTTTTTTTTTTTTG+AGG - chr7_4:58550876-58550895 None:intergenic 10.0%
!! TTTATTATTAAAGAAATGAT+AGG - chr7_4:58551085-58551104 None:intergenic 10.0%
!! TAGAATAAATATATAAATGA+CGG + chr7_4:58552745-58552764 Msa1166450:intron 10.0%
!! TAATATATTCAATATAGTAT+TGG - chr7_4:58553648-58553667 None:intergenic 10.0%
!! ATCATTAAATCAAAATAATT+TGG + chr7_4:58553929-58553948 Msa1166450:intron 10.0%
!!! AGTTTTTTATTTTTAAAACT+CGG + chr7_4:58554291-58554310 Msa1166450:intron 10.0%
!!! TAATTAATTATTTTTTGGTA+GGG + chr7_4:58555352-58555371 Msa1166450:intron 10.0%
!! ATTTATAAAATAAAGATCAA+AGG + chr7_4:58555643-58555662 Msa1166450:three_prime_UTR 10.0%
!!! TAATTTTTATTTTTGCTAGT+TGG + chr7_4:58546310-58546329 Msa1166450:intron 15.0%
!!! TCATTTGAGTTTTTTTTTAT+TGG - chr7_4:58546709-58546728 None:intergenic 15.0%
!!! TATATACTTTTTAATATACC+AGG - chr7_4:58547565-58547584 None:intergenic 15.0%
!!! GGTATATTAAAAAGTATATA+TGG + chr7_4:58547565-58547584 Msa1166450:intron 15.0%
!!! TTTTAATATTCATGTTGTAT+AGG - chr7_4:58548737-58548756 None:intergenic 15.0%
!!! AACATTTTTAAAACATGAAA+AGG - chr7_4:58549269-58549288 None:intergenic 15.0%
!! TGAACAATAAAAAACTTAAA+AGG - chr7_4:58549431-58549450 None:intergenic 15.0%
!! CATTAATTAATTCAATAGAA+AGG + chr7_4:58549484-58549503 Msa1166450:intron 15.0%
!!! CAATTAAAAAGTTTTTTTGA+AGG - chr7_4:58549760-58549779 None:intergenic 15.0%
!! ATGATAATAATAATAACAAG+AGG + chr7_4:58551041-58551060 Msa1166450:intron 15.0%
!!! TACTTTATAAAAGTATTGTA+AGG + chr7_4:58551190-58551209 Msa1166450:intron 15.0%
!!! ACTTTATAAAAGTATTGTAA+GGG + chr7_4:58551191-58551210 Msa1166450:intron 15.0%
!! TGCTTAAAAATAATTTGATA+TGG - chr7_4:58551404-58551423 None:intergenic 15.0%
!! TTTATTCATTTCAAATTCAA+TGG + chr7_4:58551436-58551455 Msa1166450:intron 15.0%
!! ATCTATTATTATTATAGACA+AGG - chr7_4:58551569-58551588 None:intergenic 15.0%
!! TTGTCTATAATAATAATAGA+TGG + chr7_4:58551568-58551587 Msa1166450:three_prime_UTR 15.0%
!!! TATTGTAAAAACTTTTGTTT+AGG - chr7_4:58551857-58551876 None:intergenic 15.0%
!! AAAACAAAACAAAAAACATT+TGG - chr7_4:58552326-58552345 None:intergenic 15.0%
!! AGAATAAATATATAAATGAC+GGG + chr7_4:58552746-58552765 Msa1166450:intron 15.0%
!! AAAATAAAGGATTAAATTGA+TGG + chr7_4:58553440-58553459 Msa1166450:intron 15.0%
!!! TTTATTATTTTAGATTGGTT+TGG - chr7_4:58553873-58553892 Msa1166460:intron 15.0%
!!! CATTGTTTATTATTTTAGAT+TGG - chr7_4:58553878-58553897 Msa1166460:intron 15.0%
!! AATAAACAATGTAATTAGAA+TGG + chr7_4:58553887-58553906 Msa1166450:intron 15.0%
!!! CAAATATTTTGTTTTTCAAA+GGG - chr7_4:58554215-58554234 Msa1166460:intron 15.0%
!!! ACAAATATTTTGTTTTTCAA+AGG - chr7_4:58554216-58554235 Msa1166460:intron 15.0%
!! TAAAAATAGCGAAATTAAAA+AGG + chr7_4:58554245-58554264 Msa1166450:intron 15.0%
!! TTTGCATAAACAAATTTATT+AGG - chr7_4:58554644-58554663 None:intergenic 15.0%
!! AACAAATTTATTTAAGTGAA+AGG + chr7_4:58554652-58554671 Msa1166450:intron 15.0%
!!! TAACTTTTTTTTTGAAAGAA+AGG + chr7_4:58554680-58554699 Msa1166450:intron 15.0%
!! TAATATATGTTACATGAAAA+TGG + chr7_4:58555262-58555281 Msa1166450:intron 15.0%
!!! CTAATTAATTATTTTTTGGT+AGG + chr7_4:58555351-58555370 Msa1166450:intron 15.0%
!!! AATTAATTATTTTTTGGTAG+GGG + chr7_4:58555353-58555372 Msa1166450:intron 15.0%
!! ATTAAAAAGTGAATAAATTG+TGG - chr7_4:58555770-58555789 None:intergenic 15.0%
!!! TATTCTATGAACTGTTTTTT+GGG - chr7_4:58545454-58545473 None:intergenic 20.0%
!!! ATATTCTATGAACTGTTTTT+TGG - chr7_4:58545455-58545474 None:intergenic 20.0%
!! AAACAGTTCATAGAATATTT+AGG + chr7_4:58545457-58545476 Msa1166450:intron 20.0%
!!! ACATAGAATTTTGTTAATAC+CGG - chr7_4:58545841-58545860 None:intergenic 20.0%
!! TCAAAATTCAACTATGAAAA+TGG + chr7_4:58546010-58546029 Msa1166450:intron 20.0%
!!! TTTGATAGTTGATTTAAGAT+AGG - chr7_4:58546054-58546073 None:intergenic 20.0%
!! ATATTTGCTTCTTAAAATCA+CGG + chr7_4:58546564-58546583 Msa1166450:intron 20.0%
!!! TTTTTTTTATTGGTCACTTA+GGG - chr7_4:58546699-58546718 None:intergenic 20.0%
!!! TTTTTTTTTATTGGTCACTT+AGG - chr7_4:58546700-58546719 None:intergenic 20.0%
!!! TAAGTAGATAAATTGCATTT+TGG - chr7_4:58546761-58546780 None:intergenic 20.0%
!!! TATTTTTCACTTTGCTTTTA+TGG + chr7_4:58547763-58547782 Msa1166450:intron 20.0%
!!! CAACATACAATTATTTTGAT+TGG - chr7_4:58548124-58548143 None:intergenic 20.0%
!! ACATGAAAGAAATTAAGAAT+TGG + chr7_4:58548475-58548494 Msa1166450:intron 20.0%
!! CATGAAAGAAATTAAGAATT+GGG + chr7_4:58548476-58548495 Msa1166450:intron 20.0%
!! GATTCTTAAACCTTAATTTA+TGG - chr7_4:58548578-58548597 None:intergenic 20.0%
!!! AACATACAGTTTTAACTTTT+GGG - chr7_4:58548675-58548694 None:intergenic 20.0%
!!! AAACATACAGTTTTAACTTT+TGG - chr7_4:58548676-58548695 None:intergenic 20.0%
!!! TTTTTCCATAACAACAATTA+AGG - chr7_4:58548881-58548900 None:intergenic 20.0%
!! ACAATACATTGTAATATGTA+GGG + chr7_4:58548937-58548956 Msa1166450:intron 20.0%
!! TTGTTTATATTTCATTCATG+AGG - chr7_4:58549107-58549126 None:intergenic 20.0%
!! TGATAGTTGAAATGTTAATA+TGG + chr7_4:58549130-58549149 Msa1166450:intron 20.0%
!!! AGTTAAAAAGTTGATGTATA+TGG - chr7_4:58549169-58549188 None:intergenic 20.0%
!!! AATGCACTTTAAAATTTGAA+AGG - chr7_4:58549468-58549487 None:intergenic 20.0%
!!! TCGTGTTTTTTTTTTCAAAA+TGG + chr7_4:58549665-58549684 Msa1166450:intron 20.0%
!!! ATATATTTTGTCTTCTCTAA+CGG + chr7_4:58549809-58549828 Msa1166450:intron 20.0%
!! TATTGTTTAACATTAAAGCA+TGG + chr7_4:58549860-58549879 Msa1166450:intron 20.0%
!! ATTGTTTAACATTAAAGCAT+GGG + chr7_4:58549861-58549880 Msa1166450:intron 20.0%
!! TCAATGGTTACATTATATAT+TGG + chr7_4:58549967-58549986 Msa1166450:intron 20.0%
!!! CATATTTGACTAAAGTTTTA+TGG - chr7_4:58550087-58550106 None:intergenic 20.0%
!! TCAATCAGTCAAAAAAAAAA+AGG + chr7_4:58550419-58550438 Msa1166450:intron 20.0%
!!! ATAAAAGCATAAATAGCTTA+CGG + chr7_4:58550767-58550786 Msa1166450:intron 20.0%
!!! TATGTAGTATATTTGCTTTT+GGG - chr7_4:58550795-58550814 None:intergenic 20.0%
!!! TTATGTAGTATATTTGCTTT+TGG - chr7_4:58550796-58550815 None:intergenic 20.0%
!! AAATATACTACATAAGTAGT+AGG + chr7_4:58550801-58550820 Msa1166450:intron 20.0%
!!! CTTTATAAAAGTATTGTAAG+GGG + chr7_4:58551192-58551211 Msa1166450:intron 20.0%
!!! TTCAAAAACTTTTATACTAC+AGG - chr7_4:58551342-58551361 None:intergenic 20.0%
!!! CAACTTTTTAGGATAAAAAA+CGG + chr7_4:58551461-58551480 Msa1166450:intron 20.0%
!! TTAGTATAAAGTATATCTGA+GGG - chr7_4:58552934-58552953 None:intergenic 20.0%
!! ATTAGTATAAAGTATATCTG+AGG - chr7_4:58552935-58552954 None:intergenic 20.0%
!! GATGAAATAATGATAACTTA+TGG - chr7_4:58553337-58553356 None:intergenic 20.0%
!! GTATTCAAGTACATAATTTA+AGG - chr7_4:58553397-58553416 None:intergenic 20.0%
!! TCCATAAACAAGTAAAATAA+AGG + chr7_4:58553427-58553446 Msa1166450:intron 20.0%
!!! TCCTTTATTTTACTTGTTTA+TGG - chr7_4:58553431-58553450 None:intergenic 20.0%
!! GATAATACATAATATATGCA+AGG + chr7_4:58553502-58553521 Msa1166450:intron 20.0%
!!! CTTTTTGCATTTTTTAAAAC+TGG + chr7_4:58554137-58554156 Msa1166450:intron 20.0%
!!! CTAAATGTTATTTTAGGTAT+TGG - chr7_4:58554612-58554631 None:intergenic 20.0%
!! TACCTAAAATAACATTTAGA+TGG + chr7_4:58554613-58554632 Msa1166450:intron 20.0%
!! ACCTAAAATAACATTTAGAT+GGG + chr7_4:58554614-58554633 Msa1166450:intron 20.0%
!! AGGTTATATAACTATAAACA+AGG + chr7_4:58554700-58554719 Msa1166450:intron 20.0%
!!! ATGTCATTTTACTAAAAAGA+TGG + chr7_4:58554727-58554746 Msa1166450:intron 20.0%
!!! ATTAATTATTTTTTGGTAGG+GGG + chr7_4:58555354-58555373 Msa1166450:intron 20.0%
!! ACATATATCAATTTCTTTGA+CGG - chr7_4:58555824-58555843 None:intergenic 20.0%
!! AAAACTGTTTTGCTTCTTTA+TGG + chr7_4:58545332-58545351 Msa1166450:CDS 25.0%
!! CATAGAATTTTGTTAATACC+GGG - chr7_4:58545840-58545859 None:intergenic 25.0%
! AATTAGGGAGAAAAAGAATA+AGG - chr7_4:58545865-58545884 None:intergenic 25.0%
! AGATCTAATGCACTTAATTA+GGG - chr7_4:58545880-58545899 None:intergenic 25.0%
! AAGATCTAATGCACTTAATT+AGG - chr7_4:58545881-58545900 None:intergenic 25.0%
!! CATTAGATCTTTACTAGTTT+AGG + chr7_4:58545890-58545909 Msa1166450:intron 25.0%
!! TACTAGTTTAGGCTAAATTA+TGG + chr7_4:58545901-58545920 Msa1166450:intron 25.0%
!!! TTTGATAGTTGATTTGAGAT+AGG + chr7_4:58545968-58545987 Msa1166450:intron 25.0%
! CTTAAGGGACTAAAATAAAA+CGG - chr7_4:58546128-58546147 None:intergenic 25.0%
!!! GTCATTTCATTTTGGTAAAT+TGG + chr7_4:58546219-58546238 Msa1166450:intron 25.0%
!!! TTATTTTTGCTAGTTGGTTT+TGG + chr7_4:58546316-58546335 Msa1166450:intron 25.0%
! TACTGTTATTAACACTAAAC+AGG + chr7_4:58547091-58547110 Msa1166450:intron 25.0%
! CAATCCAAACATGTTAATTT+GGG - chr7_4:58547201-58547220 None:intergenic 25.0%
! TCAATCCAAACATGTTAATT+TGG - chr7_4:58547202-58547221 None:intergenic 25.0%
!! AGAAAATAATGGAGTCAAAT+GGG - chr7_4:58547438-58547457 None:intergenic 25.0%
!!! GCTTAAGGTATCATATTTTA+TGG + chr7_4:58547489-58547508 Msa1166450:intron 25.0%
!!! CTTTTTTAAATAGAGAAACC+TGG + chr7_4:58547544-58547563 Msa1166450:intron 25.0%
! TTGTTAAACTTGACTAACAT+TGG - chr7_4:58547614-58547633 None:intergenic 25.0%
!! AAAGTATCCTTATCATGTAT+TGG - chr7_4:58547803-58547822 None:intergenic 25.0%
! AATCACAAGACACTTTAATT+TGG + chr7_4:58547971-58547990 Msa1166450:intron 25.0%
! TGAATTTGACAAAATCATCT+TGG - chr7_4:58548026-58548045 None:intergenic 25.0%
! GTTGAATCATATATCTAAGA+TGG + chr7_4:58548140-58548159 Msa1166450:intron 25.0%
!!! TAGTGTTCATTATTTTGAAC+AGG + chr7_4:58548289-58548308 Msa1166450:intron 25.0%
!!! AGTGTTCATTATTTTGAACA+GGG + chr7_4:58548290-58548309 Msa1166450:intron 25.0%
! TCTTAATTTCTTTCATGTTG+AGG - chr7_4:58548473-58548492 None:intergenic 25.0%
! ATATTCATGTTGTATAGGAA+CGG - chr7_4:58548732-58548751 None:intergenic 25.0%
!!! ACAAATTTTTTCTGCAAAAG+TGG - chr7_4:58548797-58548816 None:intergenic 25.0%
! GACAATACATTGTAATATGT+AGG + chr7_4:58548936-58548955 Msa1166450:intron 25.0%
! TAGTTAAAGTTCACATTTGA+AGG - chr7_4:58548997-58549016 None:intergenic 25.0%
!! ATTTCATTCATGAGGTATTA+AGG - chr7_4:58549099-58549118 None:intergenic 25.0%
!!! CATGTTTTAAAAATGTTCTC+TGG + chr7_4:58549272-58549291 Msa1166450:intron 25.0%
!!! TTTTTCAATATAAAAAGCGC+AGG - chr7_4:58549307-58549326 None:intergenic 25.0%
!! CATTTTCCAATATAAAAAGC+AGG - chr7_4:58549343-58549362 None:intergenic 25.0%
!!! GTTTTGTTAACTAATGTTCA+AGG - chr7_4:58549370-58549389 None:intergenic 25.0%
!!! AAGGATCTTATATTTTGAGA+TGG - chr7_4:58549412-58549431 None:intergenic 25.0%
! TTTGCAGAAGCAAATAAAAA+GGG - chr7_4:58549538-58549557 None:intergenic 25.0%
!! TTTTGCAGAAGCAAATAAAA+AGG - chr7_4:58549539-58549558 None:intergenic 25.0%
! ATGAGATAGACAAACAAAAA+GGG - chr7_4:58549572-58549591 None:intergenic 25.0%
! TATGAGATAGACAAACAAAA+AGG - chr7_4:58549573-58549592 None:intergenic 25.0%
! TTCAAAATGGTCCTATAAAT+AGG + chr7_4:58549678-58549697 Msa1166450:intron 25.0%
! TTGTTTAACATTAAAGCATG+GGG + chr7_4:58549862-58549881 Msa1166450:intron 25.0%
!!! TTTGTTGATTTTCATCACAA+GGG + chr7_4:58549907-58549926 Msa1166450:intron 25.0%
! TTAATGCGTAATGTATAAAG+TGG + chr7_4:58550026-58550045 Msa1166450:intron 25.0%
! CTTTAGTCAAATATGAGAAA+TGG + chr7_4:58550092-58550111 Msa1166450:intron 25.0%
!! GTCAAAAAAAAAAAGGTACA+AGG + chr7_4:58550426-58550445 Msa1166450:intron 25.0%
!! AAAAAAAAGGTACAAGGAAA+AGG + chr7_4:58550432-58550451 Msa1166450:intron 25.0%
!! AAAAAAAGGTACAAGGAAAA+GGG + chr7_4:58550433-58550452 Msa1166450:intron 25.0%
!!! TTATATTTTGGTTACCCTTA+AGG - chr7_4:58550463-58550482 None:intergenic 25.0%
! ATACAAATATATATGCCTGT+AGG + chr7_4:58551107-58551126 Msa1166450:intron 25.0%
! TAGGTACATACAAATTACAA+TGG + chr7_4:58551126-58551145 Msa1166450:intron 25.0%
!! ATTCAATGGTACAACTTTTT+AGG + chr7_4:58551450-58551469 Msa1166450:intron 25.0%
! AATAAGCACTAGTAACAAAA+CGG + chr7_4:58551485-58551504 Msa1166450:exon 25.0%
! AATGAAAGAGTAATAGTTGT+TGG + chr7_4:58551638-58551657 Msa1166450:three_prime_UTR 25.0%
!!! AAAATTGTTTTGCTTCACTA+TGG + chr7_4:58551735-58551754 Msa1166450:three_prime_UTR 25.0%
!!! TTTTGTTTAGGAATGTATGA+TGG - chr7_4:58551845-58551864 None:intergenic 25.0%
! GATTACAAATACAGATTTGT+AGG - chr7_4:58552445-58552464 None:intergenic 25.0%
! AAAACTCTATATCAGACTAT+AGG + chr7_4:58552482-58552501 Msa1166450:intron 25.0%
!!! CAACAAAAAGGTTTTTTACT+CGG - chr7_4:58552511-58552530 None:intergenic 25.0%
!! AGATTTTGTATAGAATTGCA+CGG + chr7_4:58552648-58552667 Msa1166450:intron 25.0%
! TGTGATTGATTATGTAACTT+TGG + chr7_4:58552863-58552882 Msa1166450:intron 25.0%
! ATGCTTAGTAAAATGGTTTA+CGG + chr7_4:58553085-58553104 Msa1166450:three_prime_UTR 25.0%
! TACTTGACCTTCATATAAAA+GGG - chr7_4:58553151-58553170 None:intergenic 25.0%
!! TTTTATATGAAGGTCAAGTA+CGG + chr7_4:58553151-58553170 Msa1166450:three_prime_UTR 25.0%
! AATTAAGTCTCAAGAGTTAA+AGG + chr7_4:58553210-58553229 Msa1166450:three_prime_UTR 25.0%
!! AACCATATTAGGCAAATTTT+AGG - chr7_4:58553298-58553317 None:intergenic 25.0%
! TGTACTTGAATACATCAATT+TGG + chr7_4:58553404-58553423 Msa1166450:intron 25.0%
! CAATAGTTTAAAGACCAAAT+TGG + chr7_4:58553469-58553488 Msa1166450:intron 25.0%
! TTTAAAGACCAAATTGGTAT+TGG + chr7_4:58553475-58553494 Msa1166450:intron 25.0%
!! CAATTTGATCTTTCTTTTTG+TGG - chr7_4:58553550-58553569 None:intergenic 25.0%
!! TGTTAGTTTCAAGACTAAAT+TGG + chr7_4:58553579-58553598 Msa1166450:intron 25.0%
! ACCTCTTAAAAGAAATTAAG+AGG + chr7_4:58553616-58553635 Msa1166450:intron 25.0%
!! ACCTCTTAATTTCTTTTAAG+AGG - chr7_4:58553620-58553639 None:intergenic 25.0%
!!! TTTTAAGAGTGTTAGTTTCA+GGG - chr7_4:58554519-58554538 None:intergenic 25.0%
! CACTCTTAAAAGAAATTAAG+TGG + chr7_4:58554528-58554547 Msa1166450:intron 25.0%
! CCTAAAATAACATTTAGATG+GGG + chr7_4:58554615-58554634 Msa1166450:intron 25.0%
!!! ATTGTGTTGTATGTTACTTT+AGG + chr7_4:58554946-58554965 Msa1166450:intron 25.0%
!! AAGAATGTCCTTTTCAAAAA+TGG + chr7_4:58555001-58555020 Msa1166450:three_prime_UTR 25.0%
! AACATACGTCAAAGTATATA+TGG - chr7_4:58555315-58555334 None:intergenic 25.0%
! ATATATACTTTGACGTATGT+TGG + chr7_4:58555314-58555333 Msa1166450:intron 25.0%
! TAAAATAAAGATCAAAGGAG+AGG + chr7_4:58555648-58555667 Msa1166450:three_prime_UTR 25.0%
! AAGTATAAGCTTCAAACATA+TGG + chr7_4:58555686-58555705 Msa1166450:three_prime_UTR 25.0%
! AGTATAAGCTTCAAACATAT+GGG + chr7_4:58555687-58555706 Msa1166450:three_prime_UTR 25.0%
!! GTTCTAATTCTTTTCATACA+CGG - chr7_4:58555742-58555761 None:intergenic 25.0%
!! ATGTTGATGATGATGAGAAA+TGG + chr7_4:58545542-58545561 Msa1166450:CDS 30.0%
CATTCAACTAGGTACAAAAA+TGG + chr7_4:58545703-58545722 Msa1166450:intron 30.0%
AACTAGGTACAAAAATGGAA+AGG + chr7_4:58545708-58545727 Msa1166450:intron 30.0%
! TATGGAGATTGCTTTAGATT+TGG + chr7_4:58545777-58545796 Msa1166450:CDS 30.0%
!!! CGTTTTATTTTAGTCCCTTA+AGG + chr7_4:58546126-58546145 Msa1166450:intron 30.0%
!!! TTCCTAGTGTCATTTCATTT+TGG + chr7_4:58546211-58546230 Msa1166450:intron 30.0%
TACCAAAATGAAATGACACT+AGG - chr7_4:58546216-58546235 None:intergenic 30.0%
ATCTTAGTATGTGTTTGCTT+TGG + chr7_4:58546478-58546497 Msa1166450:intron 30.0%
!! CATTTTAAGCATGTGTTGTT+TGG - chr7_4:58546626-58546645 None:intergenic 30.0%
ATGTATACTTAATCCTCCAA+AGG + chr7_4:58546643-58546662 Msa1166450:intron 30.0%
!! TTTGCAAGTTGAATTTTGGA+GGG - chr7_4:58546673-58546692 None:intergenic 30.0%
!! ATTTGCAAGTTGAATTTTGG+AGG - chr7_4:58546674-58546693 None:intergenic 30.0%
!! GTGATTTGCAAGTTGAATTT+TGG - chr7_4:58546677-58546696 None:intergenic 30.0%
!! ATTTTGGTCGTAAGTTACAA+AGG - chr7_4:58546745-58546764 None:intergenic 30.0%
ATGTATTGTTATGCACATGT+AGG + chr7_4:58546793-58546812 Msa1166450:intron 30.0%
! TGTAGGTTCATTTTCTTTCT+AGG + chr7_4:58546810-58546829 Msa1166450:intron 30.0%
! GTAGGTTCATTTTCTTTCTA+GGG + chr7_4:58546811-58546830 Msa1166450:intron 30.0%
TCTAGGGATATGATGTATTA+TGG + chr7_4:58546827-58546846 Msa1166450:CDS 30.0%
CTAGGGATATGATGTATTAT+GGG + chr7_4:58546828-58546847 Msa1166450:CDS 30.0%
TAGGGATATGATGTATTATG+GGG + chr7_4:58546829-58546848 Msa1166450:CDS 30.0%
AAGTTTCCTATAATTGACGT+GGG + chr7_4:58546992-58547011 Msa1166450:CDS 30.0%
ACTGTCAAGAAAATCAAATC+TGG + chr7_4:58547016-58547035 Msa1166450:CDS 30.0%
AATCAAATCTGGAGAAATAC+AGG + chr7_4:58547027-58547046 Msa1166450:CDS 30.0%
TTTGCCCAAATTAACATGTT+TGG + chr7_4:58547194-58547213 Msa1166450:intron 30.0%
GTCAAGTTTCCATATATGTA+TGG - chr7_4:58547282-58547301 None:intergenic 30.0%
! CAGAAAATAATGGAGTCAAA+TGG - chr7_4:58547439-58547458 None:intergenic 30.0%
TCAAGAGATCAACTCATAAA+TGG + chr7_4:58547467-58547486 Msa1166450:CDS 30.0%
ATCAACTCATAAATGGCTTA+AGG + chr7_4:58547474-58547493 Msa1166450:CDS 30.0%
!! TATGGAGTACTACTTCTTTT+TGG + chr7_4:58547507-58547526 Msa1166450:intron 30.0%
ATTGGTATAACAGACTTAAC+AGG - chr7_4:58547596-58547615 None:intergenic 30.0%
TGAATTGAAAGTGATGTAAG+TGG - chr7_4:58547742-58547761 None:intergenic 30.0%
GAATAGACCAATACATGATA+AGG + chr7_4:58547793-58547812 Msa1166450:intron 30.0%
!!! TCAGTTATTTTGAGACAGAA+CGG + chr7_4:58547895-58547914 Msa1166450:intron 30.0%
TAGCTATACTGATAGAATCA+TGG + chr7_4:58547936-58547955 Msa1166450:intron 30.0%
TTAGGATGGACCATAAATTA+AGG + chr7_4:58548565-58548584 Msa1166450:intron 30.0%
TGAATTTCAATCGGTATACA+AGG - chr7_4:58548652-58548671 None:intergenic 30.0%
!! ACTTTTGGGTGAATTTCAAT+CGG - chr7_4:58548661-58548680 None:intergenic 30.0%
!!! GATTCAACTTTTTTCAAGGA+AGG - chr7_4:58548855-58548874 None:intergenic 30.0%
!!! GTTGGATTCAACTTTTTTCA+AGG - chr7_4:58548859-58548878 None:intergenic 30.0%
! TCCAACCTTAATTGTTGTTA+TGG + chr7_4:58548873-58548892 Msa1166450:intron 30.0%
TCCATAACAACAATTAAGGT+TGG - chr7_4:58548877-58548896 None:intergenic 30.0%
CACATTTGAAGGTGAATAAA+TGG - chr7_4:58548986-58549005 None:intergenic 30.0%
!!! CATTCTCCTGCTTTTTATAT+TGG + chr7_4:58549334-58549353 Msa1166450:intron 30.0%
TTGCAGAAGCAAATAAAAAG+GGG - chr7_4:58549537-58549556 None:intergenic 30.0%
TGAGATAGACAAACAAAAAG+GGG - chr7_4:58549571-58549590 None:intergenic 30.0%
TTCCTTTCGTTCCTATTTAT+AGG - chr7_4:58549692-58549711 None:intergenic 30.0%
!!! CTTTGTTGATTTTCATCACA+AGG + chr7_4:58549906-58549925 Msa1166450:intron 30.0%
! AAGAAACACATTAGTCTCAA+TGG + chr7_4:58549951-58549970 Msa1166450:intron 30.0%
TTATATCCTCTCAGTTTCTA+CGG + chr7_4:58549993-58550012 Msa1166450:intron 30.0%
TCAGTTTCTACGGTTATAAT+AGG + chr7_4:58550003-58550022 Msa1166450:intron 30.0%
!! TGAAACATCCTTTGAAGTTT+AGG - chr7_4:58550145-58550164 None:intergenic 30.0%
TAAGTCAGACCAATTTATAG+AGG - chr7_4:58550535-58550554 None:intergenic 30.0%
TACAAACTTACAATTTCCTC+CGG + chr7_4:58550656-58550675 Msa1166450:intron 30.0%
TTGCTTCATCTCATCTTATT+TGG + chr7_4:58550683-58550702 Msa1166450:intron 30.0%
AGATGAAATGTTCATTGTGT+TGG + chr7_4:58551001-58551020 Msa1166450:intron 30.0%
! TGTAATTTGTATGTACCTAC+AGG - chr7_4:58551125-58551144 None:intergenic 30.0%
AAGCGCAAGTGTAAATATAT+AGG - chr7_4:58551519-58551538 None:intergenic 30.0%
! CAAAACAATTTTCTCTTTCG+AGG - chr7_4:58551727-58551746 None:intergenic 30.0%
! CTTCAATTTCAGGTACAAAA+GGG - chr7_4:58552057-58552076 None:intergenic 30.0%
! CTTTTGTACCTGAAATTGAA+GGG + chr7_4:58552056-58552075 Msa1166450:three_prime_UTR 30.0%
ATTCAACTGGGTTTAAGAAT+GGG + chr7_4:58552107-58552126 Msa1166450:three_prime_UTR 30.0%
!! ATGAACATGTTCTTGTTGTT+GGG + chr7_4:58552143-58552162 Msa1166450:three_prime_UTR 30.0%
TTTGATGTGTGCATCTTAAA+AGG - chr7_4:58552349-58552368 None:intergenic 30.0%
AAAATTATAGACAGAGCACA+TGG - chr7_4:58552396-58552415 None:intergenic 30.0%
!!! CCTTTTTGTTGATGATGAAA+CGG + chr7_4:58552520-58552539 Msa1166450:intron 30.0%
!!! CTTTTTGTTGATGATGAAAC+GGG + chr7_4:58552521-58552540 Msa1166450:intron 30.0%
TAGAATTGCACGGATATATA+TGG + chr7_4:58552658-58552677 Msa1166450:intron 30.0%
AGAATTGCACGGATATATAT+GGG + chr7_4:58552659-58552678 Msa1166450:intron 30.0%
! TCTGATGAAGTATTTGTCAA+TGG + chr7_4:58553039-58553058 Msa1166450:three_prime_UTR 30.0%
GTACTTGACCTTCATATAAA+AGG - chr7_4:58553152-58553171 None:intergenic 30.0%
AAGTATCCTATTATTGACGT+TGG + chr7_4:58553175-58553194 Msa1166450:three_prime_UTR 30.0%
! TTGAGACTTAATTTTGCGAA+AGG - chr7_4:58553203-58553222 None:intergenic 30.0%
! AAAGGTACGTTAGCAATAAT+TGG + chr7_4:58553228-58553247 Msa1166450:intron 30.0%
CACCTAAAATTTGCCTAATA+TGG + chr7_4:58553293-58553312 Msa1166450:intron 30.0%
! ATTGACTTCGAAACCATATT+AGG - chr7_4:58553309-58553328 None:intergenic 30.0%
TATCCATACCAATACCAATT+TGG - chr7_4:58553486-58553505 None:intergenic 30.0%
TACATAATATATGCAAGGTC+CGG + chr7_4:58553507-58553526 Msa1166450:intron 30.0%
! TTTGATCTTTCTTTTTGTGG+TGG - chr7_4:58553547-58553566 None:intergenic 30.0%
TGTTTGCATATTCTACTAAG+AGG - chr7_4:58553680-58553699 None:intergenic 30.0%
TGTTTGCATATTCTACTAAG+AGG - chr7_4:58553680-58553699 None:intergenic 30.0%
ATATTGAAATCCACAAGAAG+TGG + chr7_4:58553743-58553762 Msa1166450:intron 30.0%
!! AAGAAGTGGATAAGTTGATT+TGG + chr7_4:58553757-58553776 Msa1166450:intron 30.0%
TTGTACATTAAATCTTGAGG+AGG - chr7_4:58553783-58553802 Msa1166460:CDS 30.0%
AGCTTGTACATTAAATCTTG+AGG - chr7_4:58553786-58553805 Msa1166460:CDS 30.0%
TGAGACTATAAGGTGTATTT+GGG + chr7_4:58553843-58553862 Msa1166450:intron 30.0%
ATATGCTGGAGAAGAATTTA+AGG - chr7_4:58554184-58554203 Msa1166460:CDS 30.0%
AAGTTGACTAAAACAACTCT+TGG - chr7_4:58554341-58554360 Msa1166460:intron 30.0%
!! TTTAAGAGTGTTAGTTTCAG+GGG - chr7_4:58554518-58554537 None:intergenic 30.0%
!!! CTTTTAAGAGTGTTAGTTTC+AGG - chr7_4:58554520-58554539 None:intergenic 30.0%
!! GGTATTGGTTATGTAACTAT+TGG - chr7_4:58554597-58554616 None:intergenic 30.0%
!!! CCCCATCTAAATGTTATTTT+AGG - chr7_4:58554618-58554637 None:intergenic 30.0%
!!! TATGTTACTTTAGGTTTTGC+CGG + chr7_4:58554955-58554974 Msa1166450:intron 30.0%
!! CTTATGCATTCTATTTCTAC+CGG - chr7_4:58554977-58554996 None:intergenic 30.0%
GTAGAAATAGAATGCATAAG+TGG + chr7_4:58554977-58554996 Msa1166450:three_prime_UTR 30.0%
!! GCAATTGACCATTTTTGAAA+AGG - chr7_4:58555012-58555031 None:intergenic 30.0%
TGTAGAAACCAAAAGAAATG+TGG + chr7_4:58555289-58555308 Msa1166450:intron 30.0%
! ATATATGGCCACATTTCTTT+TGG - chr7_4:58555300-58555319 None:intergenic 30.0%
! GATTACCTTTTGAATGATGA+TGG + chr7_4:58555379-58555398 Msa1166450:three_prime_UTR 30.0%
GAATACCATCATCATTCAAA+AGG - chr7_4:58555387-58555406 None:intergenic 30.0%
! AAGAATGGTTTGTATTGTGT+TGG + chr7_4:58555439-58555458 Msa1166450:three_prime_UTR 30.0%
GTATAAGCTTCAAACATATG+GGG + chr7_4:58555688-58555707 Msa1166450:three_prime_UTR 30.0%
TTCGAGAATGATGAAAGGTA+TGG - chr7_4:58545308-58545327 None:intergenic 35.0%
TCTCTTTCGAGAATGATGAA+AGG - chr7_4:58545313-58545332 None:intergenic 35.0%
!!! TGTTTTTTGGGTACATAGTG+AGG - chr7_4:58545442-58545461 None:intergenic 35.0%
CAACAGCTCTGTTGTATATA+GGG - chr7_4:58545510-58545529 None:intergenic 35.0%
TCAACAGCTCTGTTGTATAT+AGG - chr7_4:58545511-58545530 None:intergenic 35.0%
!! TTGATGATGATGAGAAATGG+AGG + chr7_4:58545545-58545564 Msa1166450:CDS 35.0%
! TGATGATGATGAGAAATGGA+GGG + chr7_4:58545546-58545565 Msa1166450:CDS 35.0%
AAAGCTGAGAATAAGAGTTC+TGG + chr7_4:58545571-58545590 Msa1166450:CDS 35.0%
! GCTTTAGATTTGGCTAACTT+TGG + chr7_4:58545787-58545806 Msa1166450:CDS 35.0%
TTCAATCATTGTTAGAAGCC+CGG + chr7_4:58545819-58545838 Msa1166450:CDS 35.0%
AATCTGCATGTTGCAAATCA+CGG - chr7_4:58545928-58545947 None:intergenic 35.0%
! AAACATCTGACTTGACAAGA+AGG + chr7_4:58546247-58546266 Msa1166450:intron 35.0%
!!! TTTTGCTAGTTGGTTTTGGA+AGG + chr7_4:58546320-58546339 Msa1166450:intron 35.0%
!!! TTGGTTTTGGAAGGTTTTAG+AGG + chr7_4:58546329-58546348 Msa1166450:intron 35.0%
GTAAAAACAGTTCCAAAGTG+CGG + chr7_4:58546586-58546605 Msa1166450:intron 35.0%
!! AATTTTGGAGGGAAAACCTT+TGG - chr7_4:58546662-58546681 None:intergenic 35.0%
GTTACAAAGGATAGACATGT+TGG - chr7_4:58546732-58546751 None:intergenic 35.0%
AGGGATATGATGTATTATGG+GGG + chr7_4:58546830-58546849 Msa1166450:CDS 35.0%
TATGGAGATCTGAGCAAATA+TGG + chr7_4:58546920-58546939 Msa1166450:CDS 35.0%
TACTTCATCTTCATGGTGAA+CGG - chr7_4:58546968-58546987 None:intergenic 35.0%
TTCACCATGAAGATGAAGTA+TGG + chr7_4:58546968-58546987 Msa1166450:CDS 35.0%
CAAGTTTCCTATAATTGACG+TGG + chr7_4:58546991-58547010 Msa1166450:CDS 35.0%
TCCAAGAGAGATCAGTATTT+AGG - chr7_4:58547122-58547141 None:intergenic 35.0%
GCACTTGTGAATACATTAAG+AGG + chr7_4:58547243-58547262 Msa1166450:intron 35.0%
TAAAGACATAGATTGACGAG+TGG + chr7_4:58547321-58547340 Msa1166450:intron 35.0%
! AATAATGGAGTCAAATGGGT+AGG - chr7_4:58547434-58547453 None:intergenic 35.0%
GAAACCAGTGCAGAAAATAA+TGG - chr7_4:58547449-58547468 None:intergenic 35.0%
!! TCACCTATTTTGAGAGAGAA+CGG - chr7_4:58547668-58547687 None:intergenic 35.0%
ATGACACTGCATTCAATCAA+GGG - chr7_4:58548251-58548270 None:intergenic 35.0%
!!! GTTCATTATTTTGAACAGGG+TGG + chr7_4:58548293-58548312 Msa1166450:intron 35.0%
AGCAAATGATATTGCTATGC+TGG + chr7_4:58548445-58548464 Msa1166450:CDS 35.0%
CATGTCATATGTTCTGTGAT+TGG + chr7_4:58548504-58548523 Msa1166450:intron 35.0%
CATTGTAATATGTAGGGATC+AGG + chr7_4:58548943-58548962 Msa1166450:intron 35.0%
! ATATAAAAAGCGCAGGAGAA+GGG - chr7_4:58549300-58549319 None:intergenic 35.0%
! AATATAAAAAGCGCAGGAGA+AGG - chr7_4:58549301-58549320 None:intergenic 35.0%
TGCAGAAGCAAATAAAAAGG+GGG - chr7_4:58549536-58549555 None:intergenic 35.0%
GTCCTATAAATAGGAACGAA+AGG + chr7_4:58549687-58549706 Msa1166450:intron 35.0%
TTATAACCGTAGAAACTGAG+AGG - chr7_4:58550002-58550021 None:intergenic 35.0%
! TGTCACTTCCTAAACTTCAA+AGG + chr7_4:58550134-58550153 Msa1166450:intron 35.0%
! ACACTTGCTCTGAATGTAAA+AGG + chr7_4:58550389-58550408 Msa1166450:intron 35.0%
GGTCGTAAACCTCTATAAAT+TGG + chr7_4:58550523-58550542 Msa1166450:intron 35.0%
! AGTTTGGTTTCATGGAACTA+GGG - chr7_4:58550565-58550584 None:intergenic 35.0%
! TACGTATGAGTTTGGTTTCA+TGG - chr7_4:58550573-58550592 None:intergenic 35.0%
TACGTATGTACGTATGAGTT+TGG - chr7_4:58550581-58550600 None:intergenic 35.0%
AATAACAAGAGGAATGCTAG+AGG + chr7_4:58551052-58551071 Msa1166450:intron 35.0%
ATAACAAGAGGAATGCTAGA+GGG + chr7_4:58551053-58551072 Msa1166450:intron 35.0%
GGATTGTATAAGGAATGGAT+TGG - chr7_4:58551706-58551725 None:intergenic 35.0%
TTCGAGGATTGTATAAGGAA+TGG - chr7_4:58551711-58551730 None:intergenic 35.0%
TCTCTTTCGAGGATTGTATA+AGG - chr7_4:58551716-58551735 None:intergenic 35.0%
!!! GCTCGCAAAATTGTTTTTTG+AGG - chr7_4:58551793-58551812 None:intergenic 35.0%
! TGTATGATGGAAAAGAAGGT+GGG - chr7_4:58551832-58551851 None:intergenic 35.0%
! ATGTATGATGGAAAAGAAGG+TGG - chr7_4:58551833-58551852 None:intergenic 35.0%
! GGAATGTATGATGGAAAAGA+AGG - chr7_4:58551836-58551855 None:intergenic 35.0%
!! ATGATGAAGGTTCTGAGAAA+TGG + chr7_4:58551945-58551964 Msa1166450:three_prime_UTR 35.0%
AAGGCTATGAATAAGGATTC+CGG + chr7_4:58551974-58551993 Msa1166450:three_prime_UTR 35.0%
! GGAATATGAAGGAAGGTTTT+TGG + chr7_4:58552006-58552025 Msa1166450:three_prime_UTR 35.0%
! CCTTCAATTTCAGGTACAAA+AGG - chr7_4:58552058-58552077 None:intergenic 35.0%
! CCTTTTGTACCTGAAATTGA+AGG + chr7_4:58552055-58552074 Msa1166450:three_prime_UTR 35.0%
AGTTGAATGAATCACTTTCC+CGG - chr7_4:58552095-58552114 None:intergenic 35.0%
GGAAAGTGATTCATTCAACT+GGG + chr7_4:58552095-58552114 Msa1166450:three_prime_UTR 35.0%
CATTCAACTGGGTTTAAGAA+TGG + chr7_4:58552106-58552125 Msa1166450:three_prime_UTR 35.0%
! GATGAACATGTTCTTGTTGT+TGG + chr7_4:58552142-58552161 Msa1166450:three_prime_UTR 35.0%
!! TTCTGGAATGGAAATTGCAT+TGG + chr7_4:58552174-58552193 Msa1166450:three_prime_UTR 35.0%
CCGTTTCATCATCAACAAAA+AGG - chr7_4:58552523-58552542 None:intergenic 35.0%
! GTTAGCTGTTGATTATACGT+AGG + chr7_4:58552820-58552839 Msa1166450:intron 35.0%
ACGAATACAATGTAATGTGC+AGG + chr7_4:58552976-58552995 Msa1166450:intron 35.0%
! GAAGTATTTGTCAATGGAGA+TGG + chr7_4:58553045-58553064 Msa1166450:three_prime_UTR 35.0%
! GATGGTGATGCTTAGTAAAA+TGG + chr7_4:58553078-58553097 Msa1166450:three_prime_UTR 35.0%
TACGGAGATGTCACAAATTA+TGG + chr7_4:58553103-58553122 Msa1166450:three_prime_UTR 35.0%
GATGTCACAAATTATGGAGT+TGG + chr7_4:58553109-58553128 Msa1166450:three_prime_UTR 35.0%
! TCACAAATTATGGAGTTGGT+AGG + chr7_4:58553113-58553132 Msa1166450:three_prime_UTR 35.0%
AAGGTTCCAACGTCAATAAT+AGG - chr7_4:58553184-58553203 None:intergenic 35.0%
ACGTTAGCAATAATTGGCAT+TGG + chr7_4:58553234-58553253 Msa1166450:intron 35.0%
!! ATAATTGGCATTGGTTGCTT+TGG + chr7_4:58553243-58553262 Msa1166450:intron 35.0%
!! AGACCAAATTGGTATTGGTA+TGG + chr7_4:58553480-58553499 Msa1166450:intron 35.0%
ACATAATATATGCAAGGTCC+GGG + chr7_4:58553508-58553527 Msa1166450:intron 35.0%
ATCAACTTATCCACTTCTTG+TGG - chr7_4:58553756-58553775 Msa1166460:CDS 35.0%
GTGAGACTATAAGGTGTATT+TGG + chr7_4:58553842-58553861 Msa1166450:intron 35.0%
TAATGCATACATCTTCAGCT+AGG + chr7_4:58553989-58554008 Msa1166450:intron 35.0%
! ATTGCACTTTTGGTGGAATT+TGG - chr7_4:58554071-58554090 Msa1166460:CDS 35.0%
! TATCAGAATTGCACTTTTGG+TGG - chr7_4:58554078-58554097 Msa1166460:CDS 35.0%
! CCTTATCAGAATTGCACTTT+TGG - chr7_4:58554081-58554100 Msa1166460:CDS 35.0%
! CCAAAAGTGCAATTCTGATA+AGG + chr7_4:58554078-58554097 Msa1166450:intron 35.0%
ATGCAAAAAGATAGTTCGTC+AGG - chr7_4:58554127-58554146 Msa1166460:CDS 35.0%
!!! TGCATTTTAGCTGGATTTGA+TGG - chr7_4:58554457-58554476 Msa1166460:CDS 35.0%
TCAAATCCAGCTAAAATGCA+AGG + chr7_4:58554457-58554476 Msa1166450:intron 35.0%
CAAATCCAGCTAAAATGCAA+GGG + chr7_4:58554458-58554477 Msa1166450:intron 35.0%
TCTGAATCATTCTTCAAGTG+AGG - chr7_4:58554790-58554809 None:intergenic 35.0%
! GACTCTATTATTTTCTGCAC+CGG + chr7_4:58555040-58555059 Msa1166450:three_prime_UTR 35.0%
AACATCAACAACAGCAACAA+CGG + chr7_4:58555192-58555211 Msa1166450:intron 35.0%
TTCTTTCCCTTCCAATGAAT+GGG - chr7_4:58555424-58555443 None:intergenic 35.0%
ATTCTTTCCCTTCCAATGAA+TGG - chr7_4:58555425-58555444 None:intergenic 35.0%
ATTCATTGGAAGGGAAAGAA+TGG + chr7_4:58555424-58555443 Msa1166450:three_prime_UTR 35.0%
TGTATTGTGTTGGACTATCA+AGG + chr7_4:58555449-58555468 Msa1166450:three_prime_UTR 35.0%
!! GAAGCACCGGTGATAATAAT+CGG + chr7_4:58545235-58545254 Msa1166450:CDS 40.0%
ATGAAGATGAACACGATCGT+AGG - chr7_4:58545368-58545387 None:intergenic 40.0%
TGAGGATAAGAAGGTGGAAA+AGG - chr7_4:58545424-58545443 None:intergenic 40.0%
ACATAGTGAGGATAAGAAGG+TGG - chr7_4:58545430-58545449 None:intergenic 40.0%
GGTACATAGTGAGGATAAGA+AGG - chr7_4:58545433-58545452 None:intergenic 40.0%
! TAAGAGTTCTGGTGAAGTTG+AGG + chr7_4:58545582-58545601 Msa1166450:CDS 40.0%
! GGAGTATTCTGGAAGATTCT+TGG + chr7_4:58545603-58545622 Msa1166450:CDS 40.0%
AGATTCTTGGTTGTTGCTAG+TGG + chr7_4:58545616-58545635 Msa1166450:CDS 40.0%
AAGGGTTGGAGAGTTTCAAA+GGG + chr7_4:58545671-58545690 Msa1166450:intron 40.0%
GGAAAGTGATGCATTCAACT+AGG + chr7_4:58545692-58545711 Msa1166450:intron 40.0%
! GATGAGCATGTTCTTGTTGT+TGG + chr7_4:58545739-58545758 Msa1166450:CDS 40.0%
!! CATGTTCTTGTTGTTGGTTC+TGG + chr7_4:58545745-58545764 Msa1166450:CDS 40.0%
!! GTTGTTGGTTCTGGTAATTC+TGG + chr7_4:58545754-58545773 Msa1166450:CDS 40.0%
!! TGGTTCTGGTAATTCTGGTA+TGG + chr7_4:58545759-58545778 Msa1166450:CDS 40.0%
GGGCTTCTAACAATGATTGA+AGG - chr7_4:58545820-58545839 None:intergenic 40.0%
GTGTGACGATTGTACCTTAA+GGG - chr7_4:58546143-58546162 None:intergenic 40.0%
TGTGTGACGATTGTACCTTA+AGG - chr7_4:58546144-58546163 None:intergenic 40.0%
!! ACAGCACTTTAGCTCTTTGT+CGG - chr7_4:58546286-58546305 None:intergenic 40.0%
TATGTGTTTGCTTTGGCAGT+GGG + chr7_4:58546485-58546504 Msa1166450:intron 40.0%
! CAGCTTTAATATCCGCACTT+TGG - chr7_4:58546601-58546620 None:intergenic 40.0%
TAACTATCTGTCACCAAGCA+CGG + chr7_4:58546862-58546881 Msa1166450:CDS 40.0%
ATAGCAAGCAGGATTGTGTA+TGG + chr7_4:58546902-58546921 Msa1166450:CDS 40.0%
! GGTATACCTTTTCCTAGTGA+AGG + chr7_4:58546941-58546960 Msa1166450:CDS 40.0%
ACTTCATCTTCATGGTGAAC+GGG - chr7_4:58546967-58546986 None:intergenic 40.0%
CTTGCCATACTTCATCTTCA+TGG - chr7_4:58546975-58546994 None:intergenic 40.0%
ACAGTTCCCACGTCAATTAT+AGG - chr7_4:58547001-58547020 None:intergenic 40.0%
GCCTAAATACTGATCTCTCT+TGG + chr7_4:58547118-58547137 Msa1166450:intron 40.0%
AAGCACATGACATGCATAGA+TGG + chr7_4:58547144-58547163 Msa1166450:intron 40.0%
CATTAAGAGGTTGAGTGATG+CGG + chr7_4:58547256-58547275 Msa1166450:intron 40.0%
!! CTTATGCTCTCTATTTCTGC+TGG - chr7_4:58547379-58547398 None:intergenic 40.0%
! GCAGAAATAGAGAGCATAAG+TGG + chr7_4:58547379-58547398 Msa1166450:CDS 40.0%
! ATGGGTAGGATTTTCCATCA+CGG - chr7_4:58547420-58547439 None:intergenic 40.0%
! GACTCCATTATTTTCTGCAC+TGG + chr7_4:58547442-58547461 Msa1166450:CDS 40.0%
!! CTATTTTGAGAGAGAACGGA+AGG - chr7_4:58547664-58547683 None:intergenic 40.0%
CTTCCGTTCTCTCTCAAAAT+AGG + chr7_4:58547662-58547681 Msa1166450:intron 40.0%
CATGACACTGCATTCAATCA+AGG - chr7_4:58548252-58548271 None:intergenic 40.0%
! GGTGATCTTTTGAATGAGGA+TGG + chr7_4:58548314-58548333 Msa1166450:CDS 40.0%
TTCCAATGGTATGGTAAACC+AGG - chr7_4:58548350-58548369 None:intergenic 40.0%
TGGTTTACCATACCATTGGA+AGG + chr7_4:58548349-58548368 Msa1166450:CDS 40.0%
GGTTTACCATACCATTGGAA+GGG + chr7_4:58548350-58548369 Msa1166450:CDS 40.0%
TTCTTACCCTTCCAATGGTA+TGG - chr7_4:58548359-58548378 None:intergenic 40.0%
TACCATTGGAAGGGTAAGAA+CGG + chr7_4:58548359-58548378 Msa1166450:CDS 40.0%
! AAGAACGGTTTTTACTGCGT+TGG + chr7_4:58548374-58548393 Msa1166450:CDS 40.0%
! AGAACGGTTTTTACTGCGTT+GGG + chr7_4:58548375-58548394 Msa1166450:CDS 40.0%
! TTGTCAAGGAGGGGATTTTA+TGG + chr7_4:58548398-58548417 Msa1166450:CDS 40.0%
CATCCTAAATCGCACACAAT+CGG - chr7_4:58548553-58548572 None:intergenic 40.0%
! TTGATGCTGCTTGCATGTTA+AGG - chr7_4:58550312-58550331 None:intergenic 40.0%
AAGGAAAAGGGCTAACCTTA+AGG + chr7_4:58550445-58550464 Msa1166450:intron 40.0%
AGGAAAAGGGCTAACCTTAA+GGG + chr7_4:58550446-58550465 Msa1166450:intron 40.0%
! GTTTGGTTTCATGGAACTAG+GGG - chr7_4:58550564-58550583 None:intergenic 40.0%
! GAGTTTGGTTTCATGGAACT+AGG - chr7_4:58550566-58550585 None:intergenic 40.0%
GATGAGATGAAGCAAACAAC+CGG - chr7_4:58550678-58550697 None:intergenic 40.0%
AGAGTAATAGTTGTTGGAGC+AGG + chr7_4:58551644-58551663 Msa1166450:three_prime_UTR 40.0%
GAGAATGCAGAGTATGATGA+AGG + chr7_4:58551932-58551951 Msa1166450:three_prime_UTR 40.0%
!! TGAAGGTTCTGAGAAATGGA+AGG + chr7_4:58551949-58551968 Msa1166450:three_prime_UTR 40.0%
! TTCTGAGAAATGGAAGGTGA+AGG + chr7_4:58551955-58551974 Msa1166450:three_prime_UTR 40.0%
GAAGGTGAAGGCTATGAATA+AGG + chr7_4:58551967-58551986 Msa1166450:three_prime_UTR 40.0%
TATGAATAAGGATTCCGGTG+AGG + chr7_4:58551979-58551998 Msa1166450:three_prime_UTR 40.0%
TTCATATTCCTCAACCTCAC+CGG - chr7_4:58551996-58552015 None:intergenic 40.0%
AGGTTGAGGAATATGAAGGA+AGG + chr7_4:58551999-58552018 Msa1166450:three_prime_UTR 40.0%
!!! TGAAGGAAGGTTTTTGGTTG+TGG + chr7_4:58552012-58552031 Msa1166450:three_prime_UTR 40.0%
CTCTTCAACCCTTCAATTTC+AGG - chr7_4:58552067-58552086 None:intergenic 40.0%
! GAAGGGTTGAAGAGTTTTAC+CGG + chr7_4:58552073-58552092 Msa1166450:three_prime_UTR 40.0%
! AAGGGTTGAAGAGTTTTACC+GGG + chr7_4:58552074-58552093 Msa1166450:three_prime_UTR 40.0%
GGGAAAGTGATTCATTCAAC+TGG + chr7_4:58552094-58552113 Msa1166450:three_prime_UTR 40.0%
GCATTGGATCTTATCAACCA+TGG + chr7_4:58552190-58552209 Msa1166450:three_prime_UTR 40.0%
!! CGATTGAAGTTTTAGCACCA+TGG - chr7_4:58552210-58552229 None:intergenic 40.0%
TTCAATCGTTGTTCGAAGCA+AGG + chr7_4:58552222-58552241 Msa1166450:three_prime_UTR 40.0%
TCTTCCGTGAAGGGAATATT+GGG - chr7_4:58552623-58552642 None:intergenic 40.0%
ATCTTCCGTGAAGGGAATAT+TGG - chr7_4:58552624-58552643 None:intergenic 40.0%
AATATTCCCTTCACGGAAGA+TGG + chr7_4:58552623-58552642 Msa1166450:intron 40.0%
ATCTTACCATCTTCCGTGAA+GGG - chr7_4:58552632-58552651 None:intergenic 40.0%
AATCTTACCATCTTCCGTGA+AGG - chr7_4:58552633-58552652 None:intergenic 40.0%
! TAAATGACGGGATGAATGAG+TGG + chr7_4:58552758-58552777 Msa1166450:intron 40.0%
AAAGTATATCTGAGGGTGAC+AGG - chr7_4:58552927-58552946 None:intergenic 40.0%
! CAGGTTCACATTTTGTCAAG+TGG + chr7_4:58552995-58553014 Msa1166450:intron 40.0%
TCAAGTGGCATGCTGAATTT+GGG + chr7_4:58553010-58553029 Msa1166450:three_prime_UTR 40.0%
GTATTTGTCAATGGAGATGG+TGG + chr7_4:58553048-58553067 Msa1166450:three_prime_UTR 40.0%
CATAATATATGCAAGGTCCG+GGG + chr7_4:58553509-58553528 Msa1166450:intron 40.0%
! ATCTTTCTTTTTGTGGTGGC+CGG - chr7_4:58553543-58553562 None:intergenic 40.0%
! ACTTTTGGTGGAATTTGGAG+TGG - chr7_4:58554066-58554085 Msa1166460:CDS 40.0%
GTGCAATTCTGATAAGGACA+TGG + chr7_4:58554084-58554103 Msa1166450:intron 40.0%
AAAGGGACATACACATATGC+TGG - chr7_4:58554198-58554217 Msa1166460:intron 40.0%
! TCAAGTGAGGTACTTTGCAA+GGG - chr7_4:58554777-58554796 None:intergenic 40.0%
! TTCAAGTGAGGTACTTTGCA+AGG - chr7_4:58554778-58554797 None:intergenic 40.0%
TCAAGAGATCTACCCACAAA+TGG + chr7_4:58555065-58555084 Msa1166450:three_prime_UTR 40.0%
ATCTACCCACAAATGGCTTA+AGG + chr7_4:58555072-58555091 Msa1166450:three_prime_UTR 40.0%
CCAAACCTTAAGCCATTTGT+GGG - chr7_4:58555080-58555099 None:intergenic 40.0%
TCCAAACCTTAAGCCATTTG+TGG - chr7_4:58555081-58555100 None:intergenic 40.0%
CAGCAACAACGGTAAAATGA+AGG + chr7_4:58555203-58555222 Msa1166450:intron 40.0%
TTCCAATGAATGGGGTAACT+TGG - chr7_4:58555415-58555434 None:intergenic 40.0%
AAGTTACCCCATTCATTGGA+AGG + chr7_4:58555414-58555433 Msa1166450:three_prime_UTR 40.0%
AGTTACCCCATTCATTGGAA+GGG + chr7_4:58555415-58555434 Msa1166450:three_prime_UTR 40.0%
TCTTTCCCTTCCAATGAATG+GGG - chr7_4:58555423-58555442 None:intergenic 40.0%
CTATCAAGGAGAGGTTTCTA+TGG + chr7_4:58555463-58555482 Msa1166450:three_prime_UTR 40.0%
! CGTTGATTAGATGTCAGTTG+AGG + chr7_4:58555603-58555622 Msa1166450:three_prime_UTR 40.0%
CCAGCTCCGATTATTATCAC+CGG - chr7_4:58545244-58545263 None:intergenic 45.0%
ATAATCGGAGCTGGAACATC+CGG + chr7_4:58545250-58545269 Msa1166450:CDS 45.0%
! TTTTGTTAAGCAAGCTGCCG+TGG - chr7_4:58545281-58545300 None:intergenic 45.0%
GAAGGTGGAAAAGGAAAGTG+TGG - chr7_4:58545415-58545434 None:intergenic 45.0%
!! GGTGAAGTTGAGGAGTATTC+TGG + chr7_4:58545592-58545611 Msa1166450:CDS 45.0%
GAAGGGTTGGAGAGTTTCAA+AGG + chr7_4:58545670-58545689 Msa1166450:intron 45.0%
! CATCTGACTTGACAAGAAGG+AGG + chr7_4:58546250-58546269 Msa1166450:intron 45.0%
GTATGTGTTTGCTTTGGCAG+TGG + chr7_4:58546484-58546503 Msa1166450:intron 45.0%
!! GCGGATTGTTACTGCGATTT+TGG - chr7_4:58546525-58546544 None:intergenic 45.0%
!! TCTTAGCTTTGCTGCAAACG+CGG - chr7_4:58546544-58546563 None:intergenic 45.0%
TTTGGAGGGAAAACCTTTGG+AGG - chr7_4:58546659-58546678 None:intergenic 45.0%
AACTAGTGGTGATAGCAAGC+AGG + chr7_4:58546891-58546910 Msa1166450:CDS 45.0%
GTGATGCGGCCATACATATA+TGG + chr7_4:58547270-58547289 Msa1166450:intron 45.0%
! AACCAAGTGTTGTTCCGTGA+TGG + chr7_4:58547403-58547422 Msa1166450:CDS 45.0%
TTCCATCACGGAACAACACT+TGG - chr7_4:58547408-58547427 None:intergenic 45.0%
!!! AACGGAAGGAGTGTTTTGCA+AGG - chr7_4:58547650-58547669 None:intergenic 45.0%
! GGGTGGTGATCTTTTGAATG+AGG + chr7_4:58548310-58548329 Msa1166450:intron 45.0%
TGGTATGGTAAACCAGGCTT+TGG - chr7_4:58548344-58548363 None:intergenic 45.0%
AGCCTGGTTTACCATACCAT+TGG + chr7_4:58548345-58548364 Msa1166450:CDS 45.0%
AACCGTTCTTACCCTTCCAA+TGG - chr7_4:58548364-58548383 None:intergenic 45.0%
! TTTACTGCGTTGGGTTGTCA+AGG + chr7_4:58548384-58548403 Msa1166450:CDS 45.0%
!! TTGCTACATTTTGAGCGTCG+AGG - chr7_4:58548430-58548449 None:intergenic 45.0%
CGATTGTGTGCGATTTAGGA+TGG + chr7_4:58548551-58548570 Msa1166450:intron 45.0%
GTTAAGGTTTCTATACCCCG+AGG - chr7_4:58550296-58550315 None:intergenic 45.0%
GATGGAAAAGAAGGTGGGAA+TGG - chr7_4:58551827-58551846 None:intergenic 45.0%
TCCTCTGTATCACAGAACAG+TGG + chr7_4:58551910-58551929 Msa1166450:three_prime_UTR 45.0%
TCCACTGTTCTGTGATACAG+AGG - chr7_4:58551914-58551933 None:intergenic 45.0%
GGTGAGGTTGAGGAATATGA+AGG + chr7_4:58551995-58552014 Msa1166450:three_prime_UTR 45.0%
!!! AGGTTTTTGGTTGTGGCTAG+TGG + chr7_4:58552019-58552038 Msa1166450:three_prime_UTR 45.0%
!! CATGTTCTTGTTGTTGGGTC+TGG + chr7_4:58552148-58552167 Msa1166450:three_prime_UTR 45.0%
GTTGTTGGGTCTGGAAATTC+TGG + chr7_4:58552157-58552176 Msa1166450:three_prime_UTR 45.0%
! TGGGTCTGGAAATTCTGGAA+TGG + chr7_4:58552162-58552181 Msa1166450:three_prime_UTR 45.0%
CTTCCCCAATATTCCCTTCA+CGG + chr7_4:58552616-58552635 Msa1166450:intron 45.0%
CTTCCGTGAAGGGAATATTG+GGG - chr7_4:58552622-58552641 None:intergenic 45.0%
GTCAAGTGGCATGCTGAATT+TGG + chr7_4:58553009-58553028 Msa1166450:three_prime_UTR 45.0%
CAAGTGGCATGCTGAATTTG+GGG + chr7_4:58553011-58553030 Msa1166450:three_prime_UTR 45.0%
!! GGAGATGGTGGATTCAATGA+TGG + chr7_4:58553060-58553079 Msa1166450:three_prime_UTR 45.0%
ATATAAAAGGGACCCTCGCT+GGG - chr7_4:58553139-58553158 None:intergenic 45.0%
! CGAGGGTCCCTTTTATATGA+AGG + chr7_4:58553141-58553160 Msa1166450:three_prime_UTR 45.0%
! TCTTTCTTTTTGTGGTGGCC+GGG - chr7_4:58553542-58553561 None:intergenic 45.0%
GGACGAAGTGTGAGACTATA+AGG + chr7_4:58553833-58553852 Msa1166450:intron 45.0%
! TTTGGTGGAATTTGGAGTGG+TGG - chr7_4:58554063-58554082 Msa1166460:CDS 45.0%
! TTAAAACTGGCTCCAGAAGC+AGG + chr7_4:58554150-58554169 Msa1166450:intron 45.0%
! TAAAACTGGCTCCAGAAGCA+GGG + chr7_4:58554151-58554170 Msa1166450:intron 45.0%
TCGGTATCTGACCTAACGAT+CGG + chr7_4:58554310-58554329 Msa1166450:intron 45.0%
TCTTGGTTTAGCCGATCGTT+AGG - chr7_4:58554324-58554343 Msa1166460:intron 45.0%
!! CCTAACCCTTGCATTTTAGC+TGG - chr7_4:58554466-58554485 Msa1166460:CDS 45.0%
CCAGCTAAAATGCAAGGGTT+AGG + chr7_4:58554463-58554482 Msa1166450:intron 45.0%
! TTCAGGGGCAGAGATTTTGA+AGG - chr7_4:58554503-58554522 None:intergenic 45.0%
! CAAGTGAGGTACTTTGCAAG+GGG - chr7_4:58554776-58554795 None:intergenic 45.0%
TGTTGTTGTGACGTGACGAA+TGG + chr7_4:58554921-58554940 Msa1166450:intron 45.0%
GTTGTTGTGACGTGACGAAT+GGG + chr7_4:58554922-58554941 Msa1166450:intron 45.0%
CCCACAAATGGCTTAAGGTT+TGG + chr7_4:58555077-58555096 Msa1166450:intron 45.0%
TGAATGGGGTAACTTGGCTT+GGG - chr7_4:58555409-58555428 None:intergenic 45.0%
ATGAATGGGGTAACTTGGCT+TGG - chr7_4:58555410-58555429 None:intergenic 45.0%
AGCCAAGTTACCCCATTCAT+TGG + chr7_4:58555410-58555429 Msa1166450:three_prime_UTR 45.0%
TGTGTTGGACTATCAAGGAG+AGG + chr7_4:58555454-58555473 Msa1166450:three_prime_UTR 45.0%
TCAACGATCACGACGATATG+CGG - chr7_4:58555589-58555608 None:intergenic 45.0%
!!! TATTAGTTTTTATTATATTT+TGG - chr7_4:58550475-58550494 None:intergenic 5.0%
!! AATAAAAACTAATAATAATT+TGG + chr7_4:58550481-58550500 Msa1166450:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - chr7_4:58550875-58550894 None:intergenic 5.0%
!! TATTATCATAAAAAAAAAAT+AGG - chr7_4:58551030-58551049 None:intergenic 5.0%
!! TTAAAAATAAAAAACTAATA+CGG - chr7_4:58554287-58554306 Msa1166460:intron 5.0%
!!! TAATCTAATTAATTATTTTT+TGG + chr7_4:58555347-58555366 Msa1166450:intron 5.0%
CCGGTGATAATAATCGGAGC+TGG + chr7_4:58545241-58545260 Msa1166450:CDS 50.0%
CTCGTGTACCTGAGGTTGAA+GGG + chr7_4:58545653-58545672 Msa1166450:CDS 50.0%
TGTACCTGAGGTTGAAGGGT+TGG + chr7_4:58545657-58545676 Msa1166450:intron 50.0%
!!! ACTGCGATTTTGGCTGAACG+TGG - chr7_4:58546515-58546534 None:intergenic 50.0%
! ACTAGTTTCTCCACCGTGCT+TGG - chr7_4:58546878-58546897 None:intergenic 50.0%
AAGCACGGTGGAGAAACTAG+TGG + chr7_4:58546877-58546896 Msa1166450:CDS 50.0%
AACGGGCCTTCACTAGGAAA+AGG - chr7_4:58546950-58546969 None:intergenic 50.0%
! GAGGATGGTTTTCCAAAGCC+TGG + chr7_4:58548329-58548348 Msa1166450:CDS 50.0%
!! GTGCCGATTGTGTGCGATTT+AGG + chr7_4:58548547-58548566 Msa1166450:intron 50.0%
AGCATGGGGACTTCTCAATC+TGG + chr7_4:58549876-58549895 Msa1166450:intron 50.0%
CTACATGCGTAACCAGTCCT+CGG + chr7_4:58550276-58550295 Msa1166450:intron 50.0%
TACATGCGTAACCAGTCCTC+GGG + chr7_4:58550277-58550296 Msa1166450:intron 50.0%
GGCATGAGATTGCGTAGACT+AGG + chr7_4:58550502-58550521 Msa1166450:intron 50.0%
GAGATGAAGCAAACAACCGG+AGG - chr7_4:58550675-58550694 None:intergenic 50.0%
CTGCTACTGAGAGACCAGAA+GGG - chr7_4:58551670-58551689 None:intergenic 50.0%
! GAAGGTGGGAATGGTTTGTG+AGG - chr7_4:58551818-58551837 None:intergenic 50.0%
TAAGGATTCCGGTGAGGTTG+AGG + chr7_4:58551985-58552004 Msa1166450:three_prime_UTR 50.0%
CATATAAAAGGGACCCTCGC+TGG - chr7_4:58553140-58553159 None:intergenic 50.0%
! CTTTCTTTTTGTGGTGGCCG+GGG - chr7_4:58553541-58553560 None:intergenic 50.0%
GCTTCAGTCTCAAGATCCAC+AGG + chr7_4:58553812-58553831 Msa1166450:intron 50.0%
TAGTCTCACACTTCGTCCTG+TGG - chr7_4:58553831-58553850 Msa1166460:CDS 50.0%
! AAAACTGGCTCCAGAAGCAG+GGG + chr7_4:58554152-58554171 Msa1166450:intron 50.0%
GTGGGTAGATCTCTTGAAGC+CGG - chr7_4:58555062-58555081 None:intergenic 50.0%
AGGAGAGGTTTCTATGGAGC+TGG + chr7_4:58555469-58555488 Msa1166450:three_prime_UTR 50.0%
AGGTTTCTATGGAGCTGGTG+CGG + chr7_4:58555474-58555493 Msa1166450:three_prime_UTR 50.0%
TTAAGCAAGCTGCCGTGGCT+AGG - chr7_4:58545276-58545295 None:intergenic 55.0%
AGCTGAACCTCGTGTACCTG+AGG + chr7_4:58545645-58545664 Msa1166450:CDS 55.0%
CCTTCAACCTCAGGTACACG+AGG - chr7_4:58545655-58545674 None:intergenic 55.0%
CCTCGTGTACCTGAGGTTGA+AGG + chr7_4:58545652-58545671 Msa1166450:CDS 55.0%
CTCTCCAACCCTTCAACCTC+AGG - chr7_4:58545664-58545683 None:intergenic 55.0%
CACGCAGATTCACGCTGCTA+CGG - chr7_4:58546082-58546101 None:intergenic 55.0%
CTATCTGTCACCAAGCACGG+TGG + chr7_4:58546865-58546884 Msa1166450:CDS 55.0%
ATGGTGAACGGGCCTTCACT+AGG - chr7_4:58546956-58546975 None:intergenic 55.0%
! ACTGCGTTGGGTTGTCAAGG+AGG + chr7_4:58548387-58548406 Msa1166450:CDS 55.0%
! CTGCGTTGGGTTGTCAAGGA+GGG + chr7_4:58548388-58548407 Msa1166450:CDS 55.0%
! TGCGTTGGGTTGTCAAGGAG+GGG + chr7_4:58548389-58548408 Msa1166450:CDS 55.0%
ACATGCGTAACCAGTCCTCG+GGG + chr7_4:58550278-58550297 Msa1166450:intron 55.0%
GGTTTCTATACCCCGAGGAC+TGG - chr7_4:58550291-58550310 None:intergenic 55.0%
GCTGCTACTGAGAGACCAGA+AGG - chr7_4:58551671-58551690 None:intergenic 55.0%
! GGAATTTGGAGTGGTGGAGG+AGG - chr7_4:58554057-58554076 Msa1166460:CDS 55.0%
! GGTGGAATTTGGAGTGGTGG+AGG - chr7_4:58554060-58554079 Msa1166460:CDS 55.0%
TGGAACATCCGGCCTAGCCA+CGG + chr7_4:58545261-58545280 Msa1166450:CDS 60.0%
GTTGTTGGAGCAGGCCCTTC+TGG + chr7_4:58551653-58551672 Msa1166450:three_prime_UTR 60.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr7_4:58553521-58553540 Msa1166450:intron 60.0%
! TGGAGTGGTGGAGGAGGAAG+TGG - chr7_4:58554051-58554070 Msa1166460:CDS 60.0%
AAGGCCAATGCCCCTGCTTC+TGG - chr7_4:58554165-58554184 Msa1166460:CDS 60.0%
!! TGGAGTTGGTAGGCCCAGCG+AGG + chr7_4:58553123-58553142 Msa1166450:three_prime_UTR 65.0%
!! GGAGTTGGTAGGCCCAGCGA+GGG + chr7_4:58553124-58553143 Msa1166450:three_prime_UTR 65.0%
! GGCTCCAGAAGCAGGGGCAT+TGG + chr7_4:58554158-58554177 Msa1166450:intron 65.0%
GCAAGCTGCCGTGGCTAGGC+CGG - chr7_4:58545272-58545291 None:intergenic 70.0%
GGTGGCCGGGGTTTGAACCC+CGG - chr7_4:58553529-58553548 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58545229 58555861 58545229 ID=Msa1166450;Name=Msa1166450
chr7_4 mRNA 58545229 58555861 58545229 ID=Msa1166450-mRNA-1;Parent=Msa1166450;Name=Msa1166450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.7|0.54|1|0.5|0.36|11|1581|363
chr7_4 exon 58545229 58545447 58545229 ID=Msa1166450-mRNA-1:exon:17960;Parent=Msa1166450-mRNA-1
chr7_4 exon 58545463 58545674 58545463 ID=Msa1166450-mRNA-1:exon:17961;Parent=Msa1166450-mRNA-1
chr7_4 exon 58545714 58545840 58545714 ID=Msa1166450-mRNA-1:exon:17962;Parent=Msa1166450-mRNA-1
chr7_4 exon 58546815 58547048 58546815 ID=Msa1166450-mRNA-1:exon:17963;Parent=Msa1166450-mRNA-1
chr7_4 exon 58547370 58547495 58547370 ID=Msa1166450-mRNA-1:exon:17964;Parent=Msa1166450-mRNA-1
chr7_4 exon 58548311 58548466 58548311 ID=Msa1166450-mRNA-1:exon:17965;Parent=Msa1166450-mRNA-1
chr7_4 exon 58551472 58552243 58551472 ID=Msa1166450-mRNA-1:exon:17966;Parent=Msa1166450-mRNA-1
chr7_4 exon 58552998 58553231 58552998 ID=Msa1166450-mRNA-1:exon:17967;Parent=Msa1166450-mRNA-1
chr7_4 exon 58554968 58555093 58554968 ID=Msa1166450-mRNA-1:exon:17968;Parent=Msa1166450-mRNA-1
chr7_4 exon 58555373 58555789 58555373 ID=Msa1166450-mRNA-1:exon:17969;Parent=Msa1166450-mRNA-1
chr7_4 exon 58555812 58555861 58555812 ID=Msa1166450-mRNA-1:exon:17970;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58545229 58545447 58545229 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58545463 58545674 58545463 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58545714 58545840 58545714 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58546815 58547048 58546815 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58547370 58547495 58547370 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58548311 58548466 58548311 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 CDS 58551472 58551489 58551472 ID=Msa1166450-mRNA-1:cds;Parent=Msa1166450-mRNA-1
chr7_4 three_prime_UTR 58551490 58552243 58551490 ID=Msa1166450-mRNA-1:three_prime_utr;Parent=Msa1166450-mRNA-1
chr7_4 three_prime_UTR 58552998 58553231 58552998 ID=Msa1166450-mRNA-1:three_prime_utr;Parent=Msa1166450-mRNA-1
chr7_4 three_prime_UTR 58554968 58555093 58554968 ID=Msa1166450-mRNA-1:three_prime_utr;Parent=Msa1166450-mRNA-1
chr7_4 three_prime_UTR 58555373 58555789 58555373 ID=Msa1166450-mRNA-1:three_prime_utr;Parent=Msa1166450-mRNA-1
chr7_4 three_prime_UTR 58555812 58555861 58555812 ID=Msa1166450-mRNA-1:three_prime_utr;Parent=Msa1166450-mRNA-1
Gene Sequence

>Msa1166450

ATGCATGAAGCACCGGTGATAATAATCGGAGCTGGAACATCCGGCCTAGCCACGGCAGCTTGCTTAACAAAACAATCCATACCTTTCATCATTCTCGAAAGAGAAAACTGTTTTGCTTCTTTATGGCAAAACTACACCTACGATCGTGTTCATCTTCATCTAAGAAAACAACTTTGTGAGTTACCACACTTTCCTTTTCCACCTTCTTATCCTCACTATTTCATAGAATATTTAGGTAACTATGTCAACAACTTCAACATCAACCCTATATACAACAGAGCTGTTGAGTTAGCAGAGTATGTTGATGATGATGAGAAATGGAGGGTTAAAGCTGAGAATAAGAGTTCTGGTGAAGTTGAGGAGTATTCTGGAAGATTCTTGGTTGTTGCTAGTGGTGAAACAGCTGAACCTCGTGTACCTGAGGTTGAAGGGTACAAAAATGGAAAGGAGTTTAAAGATGAGCATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAGATTGCTTTAGATTTGGCTAACTTTGGTGCTAAACCTTCAATCATTGTTAGAAGCCCGGTTCATTTTCTTTCTAGGGATATGATGTATTATGGGGGCGTTTTGTTTAACTATCTGTCACCAAGCACGGTGGAGAAACTAGTGGTGATAGCAAGCAGGATTGTGTATGGAGATCTGAGCAAATATGGTATACCTTTTCCTAGTGAAGGCCCGTTCACCATGAAGATGAAGTATGGCAAGTTTCCTATAATTGACGTGGGAACTGTCAAGAAAATCAAATCTGGAGAAATACAGGTGTTGCCAGCAGAAATAGAGAGCATAAGTGGTAACCAAGTGTTGTTCCGTGATGGAAAATCCTACCCATTTGACTCCATTATTTTCTGCACTGGTTTCAAGAGATCAACTCATAAATGGCTTAAGGGTGGTGATCTTTTGAATGAGGATGGTTTTCCAAAGCCTGGTTTACCATACCATTGGAAGGGTAAGAACGGTTTTTACTGCGTTGGGTTGTCAAGGAGGGGATTTTATGGAGCTAACCTCGACGCTCAAAATGTAGCAAATGATATTGCTATGCTGGATAAAAAACGGCAATAA
Protein sequence

>Msa1166450

MHEAPVIIIGAGTSGLATAACLTKQSIPFIILERENCFASLWQNYTYDRVHLHLRKQLCELPHFPFPPSYPHYFIEYLGNYVNNFNINPIYNRAVELAEYVDDDEKWRVKAENKSSGEVEEYSGRFLVVASGETAEPRVPEVEGYKNGKEFKDEHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSRDMMYYGGVLFNYLSPSTVEKLVVIASRIVYGDLSKYGIPFPSEGPFTMKMKYGKFPIIDVGTVKKIKSGEIQVLPAEIESISGNQVLFRDGKSYPFDSIIFCTGFKRSTHKWLKGGDLLNEDGFPKPGLPYHWKGKNGFYCVGLSRRGFYGANLDAQNVANDIAMLDKKRQ*