Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282200 | KEH37362.1 | 96.923 | 325 | 10 | 0 | 4 | 328 | 28 | 352 | 0.0 | 648 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282200 | sp|I1L153|AAH2_SOYBN | 88.679 | 318 | 36 | 0 | 4 | 321 | 32 | 349 | 0.0 | 586 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282200 | A0A072V6E4 | 96.923 | 325 | 10 | 0 | 4 | 328 | 28 | 352 | 0.0 | 648 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007230 | Msa0282200 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
Msa0011720 | Msa0282200 | 0.820797 | 5.672379e-53 | -8.615850e-47 |
Msa0030000 | Msa0282200 | 0.814039 | 1.887495e-51 | -8.615850e-47 |
Msa0030030 | Msa0282200 | 0.808932 | 2.429315e-50 | -8.615850e-47 |
Msa0039200 | Msa0282200 | 0.844998 | 5.341693e-59 | -8.615850e-47 |
Msa0047470 | Msa0282200 | 0.809979 | 1.447332e-50 | -8.615850e-47 |
Msa0047940 | Msa0282200 | 0.804327 | 2.278059e-49 | -8.615850e-47 |
Msa0055280 | Msa0282200 | 0.813614 | 2.341574e-51 | -8.615850e-47 |
Msa0055590 | Msa0282200 | 0.806527 | 7.876836e-50 | -8.615850e-47 |
Msa0060600 | Msa0282200 | 0.822606 | 2.165280e-53 | -8.615850e-47 |
Msa0077330 | Msa0282200 | 0.800365 | 1.491726e-48 | -8.615850e-47 |
Msa0083160 | Msa0282200 | 0.815040 | 1.133293e-51 | -8.615850e-47 |
Msa0086820 | Msa0282200 | 0.842003 | 3.372027e-58 | -8.615850e-47 |
Msa0101060 | Msa0282200 | 0.803624 | 3.190300e-49 | -8.615850e-47 |
Msa0105340 | Msa0282200 | 0.825482 | 4.576464e-54 | -8.615850e-47 |
Msa0110520 | Msa0282200 | 0.817025 | 4.083109e-52 | -8.615850e-47 |
Msa0125230 | Msa0282200 | 0.800626 | 1.319610e-48 | -8.615850e-47 |
Msa0133670 | Msa0282200 | 0.848554 | 5.692702e-60 | -8.615850e-47 |
Msa0133880 | Msa0282200 | 0.855051 | 8.175243e-62 | -8.615850e-47 |
Msa0151690 | Msa0282200 | 0.804067 | 2.580452e-49 | -8.615850e-47 |
Msa0184120 | Msa0282200 | 0.845197 | 4.717912e-59 | -8.615850e-47 |
Msa0201100 | Msa0282200 | 0.954221 | 4.816478e-112 | -8.615850e-47 |
Msa0221800 | Msa0282200 | 0.824032 | 1.005293e-53 | -8.615850e-47 |
Msa0243620 | Msa0282200 | 0.996086 | 3.094340e-223 | -8.615850e-47 |
Msa0243690 | Msa0282200 | 0.938872 | 3.276925e-99 | -8.615850e-47 |
Msa0256170 | Msa0282200 | 0.816748 | 4.713270e-52 | -8.615850e-47 |
Msa0270610 | Msa0282200 | 0.815566 | 8.655880e-52 | -8.615850e-47 |
Msa0282200 | Msa0306130 | 0.868607 | 5.758759e-66 | -8.615850e-47 |
Msa0282200 | Msa0327150 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
Msa0282200 | Msa0330270 | 0.841256 | 5.305604e-58 | -8.615850e-47 |
Msa0282200 | Msa0338570 | 0.844450 | 7.503426e-59 | -8.615850e-47 |
Msa0282200 | Msa0369750 | 0.809126 | 2.207245e-50 | -8.615850e-47 |
Msa0282200 | Msa0379500 | 0.812603 | 3.902604e-51 | -8.615850e-47 |
Msa0282200 | Msa0411800 | 0.814454 | 1.527826e-51 | -8.615850e-47 |
Msa0282200 | Msa0423110 | 0.800463 | 1.424419e-48 | -8.615850e-47 |
Msa0282200 | Msa0427050 | 0.827205 | 1.779061e-54 | -8.615850e-47 |
Msa0282200 | Msa0448400 | 0.811461 | 6.922390e-51 | -8.615850e-47 |
Msa0282200 | Msa0473450 | 0.825589 | 4.316548e-54 | -8.615850e-47 |
Msa0282200 | Msa0475360 | 0.810847 | 9.403646e-51 | -8.615850e-47 |
Msa0282200 | Msa0486860 | 0.813530 | 2.443435e-51 | -8.615850e-47 |
Msa0282200 | Msa0502910 | 0.812584 | 3.938659e-51 | -8.615850e-47 |
Msa0282200 | Msa0509540 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
Msa0282200 | Msa0524090 | 0.803157 | 3.985856e-49 | -8.615850e-47 |
Msa0282200 | Msa0524120 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
Msa0282200 | Msa0530210 | 0.812403 | 4.315623e-51 | -8.615850e-47 |
Msa0282200 | Msa0534420 | 0.808454 | 3.072076e-50 | -8.615850e-47 |
Msa0282200 | Msa0547050 | 0.826797 | 2.227688e-54 | -8.615850e-47 |
Msa0282200 | Msa0558890 | 0.821602 | 3.700012e-53 | -8.615850e-47 |
Msa0282200 | Msa0578970 | 0.821653 | 3.600556e-53 | -8.615850e-47 |
Msa0282200 | Msa0598250 | 0.812984 | 3.219338e-51 | -8.615850e-47 |
Msa0282200 | Msa0601780 | 0.835320 | 1.797135e-56 | -8.615850e-47 |
Msa0282200 | Msa0606060 | 0.812497 | 4.116460e-51 | -8.615850e-47 |
Msa0282200 | Msa0610590 | 0.821459 | 3.991907e-53 | -8.615850e-47 |
Msa0282200 | Msa0620640 | 0.815568 | 8.650714e-52 | -8.615850e-47 |
Msa0282200 | Msa0621890 | 0.808803 | 2.587992e-50 | -8.615850e-47 |
Msa0282200 | Msa0626230 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
Msa0282200 | Msa0630960 | 0.824780 | 6.703549e-54 | -8.615850e-47 |
Msa0282200 | Msa0630970 | 0.817063 | 4.005123e-52 | -8.615850e-47 |
Msa0282200 | Msa0635990 | 0.800983 | 1.115582e-48 | -8.615850e-47 |
Msa0282200 | Msa0642910 | 0.809342 | 1.983751e-50 | -8.615850e-47 |
Msa0282200 | Msa0651190 | 0.826607 | 2.472707e-54 | -8.615850e-47 |
Msa0282200 | Msa0651790 | 0.828961 | 6.718760e-55 | -8.615850e-47 |
Msa0282200 | Msa0653710 | 0.818414 | 1.985307e-52 | -8.615850e-47 |
Msa0282200 | Msa0654060 | 0.852975 | 3.243453e-61 | -8.615850e-47 |
Msa0282200 | Msa0656270 | 0.820155 | 7.963862e-53 | -8.615850e-47 |
Msa0282200 | Msa0662850 | 0.840087 | 1.074023e-57 | -8.615850e-47 |
Msa0282200 | Msa0686610 | 0.817121 | 3.885751e-52 | -8.615850e-47 |
Msa0282200 | Msa0694250 | 0.808835 | 2.547685e-50 | -8.615850e-47 |
Msa0282200 | Msa0697140 | 0.813752 | 2.183229e-51 | -8.615850e-47 |
Msa0282200 | Msa0700070 | 0.837613 | 4.686338e-57 | -8.615850e-47 |
Msa0282200 | Msa0719340 | 0.805777 | 1.133201e-49 | -8.615850e-47 |
Msa0282200 | Msa0724050 | 0.830211 | 3.336150e-55 | -8.615850e-47 |
Msa0282200 | Msa0736930 | 0.848629 | 5.424919e-60 | -8.615850e-47 |
Msa0282200 | Msa0739570 | 0.860227 | 2.392875e-63 | -8.615850e-47 |
Msa0282200 | Msa0739610 | 0.819157 | 1.345800e-52 | -8.615850e-47 |
Msa0282200 | Msa0763880 | 0.835868 | 1.306322e-56 | -8.615850e-47 |
Msa0282200 | Msa0763910 | 0.825670 | 4.130746e-54 | -8.615850e-47 |
Msa0282200 | Msa0771960 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
Msa0282200 | Msa0772210 | 0.801178 | 1.017654e-48 | -8.615850e-47 |
Msa0282200 | Msa0778060 | 0.806771 | 6.995446e-50 | -8.615850e-47 |
Msa0282200 | Msa0778580 | 0.807876 | 4.080826e-50 | -8.615850e-47 |
Msa0282200 | Msa0782330 | 0.850530 | 1.599679e-60 | -8.615850e-47 |
Msa0282200 | Msa0787720 | 0.806693 | 7.268768e-50 | -8.615850e-47 |
Msa0282200 | Msa0797620 | 0.806987 | 6.296987e-50 | -8.615850e-47 |
Msa0282200 | Msa0815950 | 0.809581 | 1.763146e-50 | -8.615850e-47 |
Msa0282200 | Msa0824770 | 0.809395 | 1.932501e-50 | -8.615850e-47 |
Msa0282200 | Msa0843280 | 0.816193 | 6.272542e-52 | -8.615850e-47 |
Msa0282200 | Msa0844100 | 0.818076 | 2.366559e-52 | -8.615850e-47 |
Msa0282200 | Msa0860270 | 0.860240 | 2.370991e-63 | -8.615850e-47 |
Msa0282200 | Msa0897390 | 0.843256 | 1.567318e-58 | -8.615850e-47 |
Msa0282200 | Msa0903730 | 0.828655 | 7.966087e-55 | -8.615850e-47 |
Msa0282200 | Msa0907700 | 0.807363 | 5.243165e-50 | -8.615850e-47 |
Msa0282200 | Msa0908170 | 0.805618 | 1.223731e-49 | -8.615850e-47 |
Msa0282200 | Msa0923910 | 0.819379 | 1.197784e-52 | -8.615850e-47 |
Msa0282200 | Msa0934830 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
Msa0282200 | Msa0965520 | 0.803672 | 3.117332e-49 | -8.615850e-47 |
Msa0282200 | Msa0971860 | 0.812175 | 4.839568e-51 | -8.615850e-47 |
Msa0282200 | Msa0973230 | 0.818524 | 1.873824e-52 | -8.615850e-47 |
Msa0282200 | Msa0978000 | 0.849274 | 3.591193e-60 | -8.615850e-47 |
Msa0282200 | Msa1009000 | 0.807068 | 6.054459e-50 | -8.615850e-47 |
Msa0282200 | Msa1024580 | 0.856042 | 4.204207e-62 | -8.615850e-47 |
Msa0282200 | Msa1030280 | 0.821513 | 3.879227e-53 | -8.615850e-47 |
Msa0282200 | Msa1032350 | 0.805983 | 1.025706e-49 | -8.615850e-47 |
Msa0282200 | Msa1041550 | 0.822156 | 2.754327e-53 | -8.615850e-47 |
Msa0282200 | Msa1044040 | 0.802532 | 5.365862e-49 | -8.615850e-47 |
Msa0282200 | Msa1049440 | 0.822908 | 1.841512e-53 | -8.615850e-47 |
Msa0282200 | Msa1063180 | 0.833132 | 6.356350e-56 | -8.615850e-47 |
Msa0282200 | Msa1069300 | 0.834265 | 3.311492e-56 | -8.615850e-47 |
Msa0282200 | Msa1080770 | 0.835429 | 1.686535e-56 | -8.615850e-47 |
Msa0282200 | Msa1081530 | 0.809378 | 1.948685e-50 | -8.615850e-47 |
Msa0282200 | Msa1102180 | 0.845806 | 3.228236e-59 | -8.615850e-47 |
Msa0282200 | Msa1108530 | 0.846296 | 2.374651e-59 | -8.615850e-47 |
Msa0282200 | Msa1118910 | 0.825190 | 5.365828e-54 | -8.615850e-47 |
Msa0282200 | Msa1123340 | 0.861297 | 1.132887e-63 | -8.615850e-47 |
Msa0282200 | Msa1152280 | 0.837223 | 5.901106e-57 | -8.615850e-47 |
Msa0282200 | Msa1157160 | 0.819265 | 1.271456e-52 | -8.615850e-47 |
Msa0282200 | Msa1166450 | 0.828329 | 9.552791e-55 | -8.615850e-47 |
Msa0282200 | Msa1195860 | 0.800058 | 1.721827e-48 | -8.615850e-47 |
Msa0282200 | Msa1201990 | 0.809703 | 1.659498e-50 | -8.615850e-47 |
Msa0282200 | Msa1238490 | 0.806715 | 7.190056e-50 | -8.615850e-47 |
Msa0282200 | Msa1244830 | 0.804665 | 1.937487e-49 | -8.615850e-47 |
Msa0282200 | Msa1246420 | 0.833304 | 5.758859e-56 | -8.615850e-47 |
Msa0282200 | Msa1248400 | 0.802379 | 5.769434e-49 | -8.615850e-47 |
Msa0282200 | Msa1272130 | 0.801697 | 7.966742e-49 | -8.615850e-47 |
Msa0282200 | Msa1287160 | 0.843363 | 1.467413e-58 | -8.615850e-47 |
Msa0282200 | Msa1287340 | 0.842299 | 2.814192e-58 | -8.615850e-47 |
Msa0282200 | Msa1292730 | 0.819880 | 9.205698e-53 | -8.615850e-47 |
Msa0282200 | Msa1295010 | 0.804909 | 1.722215e-49 | -8.615850e-47 |
Msa0282200 | Msa1306700 | 0.802692 | 4.972217e-49 | -8.615850e-47 |
Msa0282200 | Msa1309910 | 0.807127 | 5.882728e-50 | -8.615850e-47 |
Msa0282200 | Msa1310260 | 0.813190 | 2.901188e-51 | -8.615850e-47 |
Msa0282200 | Msa1316170 | 0.821821 | 3.292200e-53 | -8.615850e-47 |
Msa0282200 | Msa1327820 | 0.828166 | 1.045788e-54 | -8.615850e-47 |
Msa0282200 | Msa1329990 | 0.806063 | 9.865929e-50 | -8.615850e-47 |
Msa0282200 | Msa1343310 | 0.810454 | 1.143379e-50 | -8.615850e-47 |
Msa0282200 | Msa1355260 | 0.831804 | 1.356428e-55 | -8.615850e-47 |
Msa0282200 | Msa1357720 | 0.819521 | 1.111665e-52 | -8.615850e-47 |
Msa0282200 | Msa1365040 | -0.822143 | 2.772912e-53 | -8.615850e-47 |
Msa0282200 | Msa1367390 | -0.805459 | 1.321098e-49 | -8.615850e-47 |
Msa0282200 | Msa1370650 | 0.830981 | 2.162083e-55 | -8.615850e-47 |
Msa0282200 | Msa1386520 | 0.817490 | 3.209950e-52 | -8.615850e-47 |
Msa0282200 | Msa1396090 | 0.804309 | 2.297685e-49 | -8.615850e-47 |
Msa0282200 | Msa1405470 | 0.808446 | 3.085668e-50 | -8.615850e-47 |
Msa0282200 | Msa1415120 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
Msa0282200 | Msa1419110 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
Msa0282200 | Msa1422750 | 0.836184 | 1.085509e-56 | -8.615850e-47 |
Msa0282200 | Msa1428440 | 0.814516 | 1.480726e-51 | -8.615850e-47 |
Msa0282200 | Msa1435470 | 0.828807 | 7.321079e-55 | -8.615850e-47 |
Msa0282200 | Msa1440180 | 0.806385 | 8.440467e-50 | -8.615850e-47 |
Msa0282200 | Msa1449740 | 0.805754 | 1.145885e-49 | -8.615850e-47 |
Msa0282200 | Msa1457670 | -0.828731 | 7.635798e-55 | -8.615850e-47 |
Msa0282200 | Msa1458920 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
Msa0282200 | Msa1464560 | 0.801597 | 8.354328e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282200 | MtrunA17_Chr2g0296941 | 96.541 | 318 | 11 | 0 | 4 | 321 | 28 | 345 | 0.0 | 629 |
Msa0282200 | MtrunA17_Chr1g0187131 | 32.877 | 292 | 174 | 5 | 32 | 320 | 67 | 339 | 1.59e-35 | 134 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282200 | AT4G20070.2 | 72.026 | 311 | 87 | 0 | 14 | 324 | 84 | 394 | 4.86e-167 | 471 |
Msa0282200 | AT4G20070.1 | 72.403 | 308 | 85 | 0 | 14 | 321 | 84 | 391 | 1.39e-165 | 472 |
Msa0282200 | AT5G43600.1 | 33.893 | 298 | 165 | 7 | 32 | 320 | 72 | 346 | 5.62e-34 | 130 |
Find 142 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAGCAACCTTATCATTTC+TGG | 0.095410 | 2_3:-17997194 | Msa0282200:three_prime_UTR |
ACATAACCCCAAACAGATTT+TGG | 0.153224 | 2_3:+17999009 | None:intergenic |
TGCAAATGCAGAAGCTTTAT+TGG | 0.176766 | 2_3:-17999852 | Msa0282200:CDS |
AAATTTAATTGTTACAAAAT+TGG | 0.209089 | 2_3:+17997001 | None:intergenic |
TATTTGTAGCATGTAATTAT+AGG | 0.239260 | 2_3:-17997128 | Msa0282200:three_prime_UTR |
ATGTGCTAGACGATGATATC+TGG | 0.266224 | 2_3:-17997225 | Msa0282200:three_prime_UTR |
CGATAAATCTTATTCGAAAA+TGG | 0.276645 | 2_3:-18000017 | Msa0282200:CDS |
TTTCCTTGATACCTCTTATC+AGG | 0.279914 | 2_3:+17999175 | None:intergenic |
TTCCCACTTGGTGTCGTTAA+AGG | 0.289921 | 2_3:-17998840 | Msa0282200:CDS |
AGATTTCAAACTACTTTCTT+AGG | 0.292944 | 2_3:-17999244 | Msa0282200:CDS |
CTTATGCTGCAAGCTGTAAT+AGG | 0.294960 | 2_3:-17996836 | Msa0282200:three_prime_UTR |
GAGCTGGCGTTTGTTGATTC+AGG | 0.310318 | 2_3:+18001256 | None:intergenic |
GTATGATCCAAAATCTGTTT+GGG | 0.312638 | 2_3:-17999016 | Msa0282200:CDS |
TTTGTGTAGGTCACGGTTAA+AGG | 0.312855 | 2_3:-17998705 | Msa0282200:intron |
TTCAGCTGTGAACTTAGTTC+TGG | 0.333589 | 2_3:+17997518 | None:intergenic |
TGCTGAACAAATTGTACTTA+TGG | 0.340654 | 2_3:-17998622 | Msa0282200:CDS |
TTGGAAATTTGTCGCTTGCC+TGG | 0.357528 | 2_3:+17998457 | None:intergenic |
AGTATGATCCAAAATCTGTT+TGG | 0.358696 | 2_3:-17999017 | Msa0282200:CDS |
GTTGATGCTGGTAAATTTGA+TGG | 0.363766 | 2_3:-17999676 | Msa0282200:CDS |
AAGTATATGTGAACATTGTA+AGG | 0.369871 | 2_3:-17996744 | Msa0282200:three_prime_UTR |
AATTTGAGAACACGGCTATA+AGG | 0.377022 | 2_3:+17997048 | None:intergenic |
ACCATACCTTGTGTTCAATA+AGG | 0.385103 | 2_3:+17998235 | None:intergenic |
TTCATATATACCTTATTGTT+CGG | 0.386389 | 2_3:-18001761 | Msa0282200:five_prime_UTR |
TTTCAGTTGGGTGGACCAAA+TGG | 0.392422 | 2_3:-17999906 | Msa0282200:intron |
AATTTGTCGCTTGCCTGGCC+TGG | 0.401249 | 2_3:+17998462 | None:intergenic |
AAATGTAAGCATGAATAAAC+TGG | 0.406955 | 2_3:+17996883 | None:intergenic |
CTTGACACACTGACCTCAAC+AGG | 0.410246 | 2_3:+17999577 | None:intergenic |
GACCATGTACATTTCCCATT+TGG | 0.413557 | 2_3:+17999891 | None:intergenic |
AGGAACAGAACCGAACAATA+AGG | 0.421071 | 2_3:+18001751 | None:intergenic |
TCGTAAGAAAGGTACTCTTC+AGG | 0.428537 | 2_3:+17998582 | None:intergenic |
TTAGGCAGTGGTGCTATAGC+TGG | 0.429341 | 2_3:-17999226 | Msa0282200:CDS |
AGTTCACTTGTTTGTACTGT+TGG | 0.437924 | 2_3:-17998522 | Msa0282200:CDS |
GAACAAGTTGGTTTCCCACT+TGG | 0.439155 | 2_3:-17998852 | Msa0282200:CDS |
TTGGTTGGCCTCCTCTTGAT+AGG | 0.440619 | 2_3:+17997020 | None:intergenic |
GGTGTCGTTAAAGGCATAGC+TGG | 0.445854 | 2_3:-17998831 | Msa0282200:CDS |
AGTGCTAGTAATGTCATTCC+AGG | 0.447467 | 2_3:-17998480 | Msa0282200:CDS |
CATGGACATTGGAACAGTTC+CGG | 0.452698 | 2_3:+17998668 | None:intergenic |
ATGTTTGAGAACAAATGAAA+AGG | 0.458265 | 2_3:-18001223 | Msa0282200:five_prime_UTR |
ATGGAAAGCTGCAAAATCTA+AGG | 0.459235 | 2_3:-17999603 | Msa0282200:CDS |
CACAGAACCACTCAGTTTGT+AGG | 0.459294 | 2_3:-18001861 | Msa0282200:five_prime_UTR |
GTGGCAAGGCTTGTTGAGCT+TGG | 0.460871 | 2_3:-18000390 | Msa0282200:CDS |
AAATGGTTAGGAATTGAAAC+TGG | 0.465677 | 2_3:-18000465 | Msa0282200:intron |
AATGCAGAAGCTTTATTGGT+TGG | 0.467018 | 2_3:-17999848 | Msa0282200:CDS |
TTTGATCATATGTATGATCA+TGG | 0.480276 | 2_3:+17996947 | None:intergenic |
CCAACATTAATGAGTGGAGC+AGG | 0.482594 | 2_3:-17997440 | Msa0282200:three_prime_UTR |
TCATCAAATTACAAACAGTC+AGG | 0.484611 | 2_3:+18001935 | None:intergenic |
CAAACTACTTTCTTAGGCAG+TGG | 0.493661 | 2_3:-17999238 | Msa0282200:CDS |
CATTGGAGATACCTGATAAG+AGG | 0.498225 | 2_3:-17999186 | Msa0282200:intron |
TTAATTGTTACAAAATTGGT+TGG | 0.498310 | 2_3:+17997005 | None:intergenic |
AAACATCAAACAAGCTGAGC+TGG | 0.500801 | 2_3:+18001240 | None:intergenic |
GTCCATGCGTCAAGATCCTA+TGG | 0.502369 | 2_3:-17998652 | Msa0282200:CDS |
TTCAGTTGGGTGGACCAAAT+GGG | 0.503176 | 2_3:-17999905 | Msa0282200:intron |
TGTTTGAGAACAAATGAAAA+GGG | 0.508018 | 2_3:-18001222 | Msa0282200:five_prime_UTR |
TTGAAAGTTATGCATGTCAA+TGG | 0.509865 | 2_3:-17999622 | Msa0282200:CDS |
ACAGAACCACTCAGTTTGTA+GGG | 0.512265 | 2_3:-18001860 | Msa0282200:five_prime_UTR |
TGCAACGACCATCGTAAGAA+AGG | 0.515554 | 2_3:+17998571 | None:intergenic |
GCTGCAGCTTCACATTGAGC+AGG | 0.516545 | 2_3:-17998886 | Msa0282200:intron |
AATGTACATGGTCGAGTTGA+GGG | 0.516730 | 2_3:-17999881 | Msa0282200:CDS |
GTACTTGATAAATTGAAGAA+AGG | 0.516995 | 2_3:-17996915 | Msa0282200:three_prime_UTR |
GGTATCTCCAATGTTGTAGC+AGG | 0.519067 | 2_3:+17999196 | None:intergenic |
TACCTTGTGTTCAATAAGGC+AGG | 0.520522 | 2_3:+17998239 | None:intergenic |
AAGGAGTTGATAGAATATAC+AGG | 0.522584 | 2_3:+18001580 | None:intergenic |
GGTAAATTTGATGGAGCACT+AGG | 0.522882 | 2_3:-17999667 | Msa0282200:CDS |
ATTTCGATGCAACAGAAACC+TGG | 0.523035 | 2_3:-18001291 | Msa0282200:five_prime_UTR |
GACGATGATATCTGGGCGGC+TGG | 0.523255 | 2_3:-17997217 | Msa0282200:three_prime_UTR |
ACAGCATGTGGTGGAGGTGG+CGG | 0.525377 | 2_3:+18001792 | None:intergenic |
ATACGAGCAATTGATGATAC+AGG | 0.526748 | 2_3:-17998327 | Msa0282200:three_prime_UTR |
GGATCTTGACGCATGGACAT+TGG | 0.526811 | 2_3:+17998657 | None:intergenic |
TAGGACACTGTTGTTGATGC+TGG | 0.528217 | 2_3:-17999688 | Msa0282200:CDS |
TGTTCACCTCAGCATGATGC+AGG | 0.530008 | 2_3:-17997557 | Msa0282200:intron |
AAATCTTATTCGAAAATGGA+TGG | 0.534286 | 2_3:-18000013 | Msa0282200:CDS |
CGAAAATGGATGGAAGATGC+TGG | 0.534327 | 2_3:-18000003 | Msa0282200:CDS |
AGCTGGGCAGACAAGATTGA+AGG | 0.535514 | 2_3:-17998814 | Msa0282200:intron |
GCAACAGAAACCTGGAAAAG+AGG | 0.537275 | 2_3:-18001283 | Msa0282200:five_prime_UTR |
ACATATCTGATAAATTCGAT+TGG | 0.541292 | 2_3:+17998278 | None:intergenic |
GGTCCTGTGCTTGAACAAGT+TGG | 0.545766 | 2_3:-17998864 | Msa0282200:CDS |
TAGTAATGTCATTCCAGGCC+AGG | 0.550343 | 2_3:-17998475 | Msa0282200:CDS |
AAATCTAAGGCGTCCTGTTG+AGG | 0.552501 | 2_3:-17999590 | Msa0282200:intron |
CATGCACGAGTGAGAAATGC+TGG | 0.553352 | 2_3:+18001836 | None:intergenic |
GACCAAATGGGAAATGTACA+TGG | 0.563951 | 2_3:-17999893 | Msa0282200:CDS |
AGAACAGCATGTGGTGGAGG+TGG | 0.565480 | 2_3:+18001789 | None:intergenic |
TGTGCTAGACGATGATATCT+GGG | 0.573456 | 2_3:-17997224 | Msa0282200:three_prime_UTR |
CTGCAGCTTCACATTGAGCA+GGG | 0.575143 | 2_3:-17998885 | Msa0282200:intron |
TTCCTGCCTTATTGAACACA+AGG | 0.575456 | 2_3:-17998241 | Msa0282200:intron |
CAAATTATTCTCCTATCAAG+AGG | 0.575584 | 2_3:-17997031 | Msa0282200:three_prime_UTR |
ATCTGTTTGGGGTTATGTCG+AGG | 0.575812 | 2_3:-17999004 | Msa0282200:intron |
AAAGGCTCACAAGGTCATGC+CGG | 0.576546 | 2_3:-17998687 | Msa0282200:CDS |
AGTATATGTGAACATTGTAA+GGG | 0.576938 | 2_3:-17996743 | Msa0282200:three_prime_UTR |
CAGCTTATTCTGCACTCAAG+AGG | 0.578224 | 2_3:-17997490 | Msa0282200:three_prime_UTR |
TGTTCAGCAGCAGCCACCAT+AGG | 0.579164 | 2_3:+17998636 | None:intergenic |
GAAAGAACAGCATGTGGTGG+AGG | 0.581921 | 2_3:+18001786 | None:intergenic |
TGGAGCAGGGCATGATGCCA+TGG | 0.582009 | 2_3:-17997426 | Msa0282200:three_prime_UTR |
TCGTCTAGCACATCCTCTTG+TGG | 0.582928 | 2_3:+17997235 | None:intergenic |
AAAGAGAATTAGCGAAAACT+CGG | 0.583055 | 2_3:-18001718 | Msa0282200:five_prime_UTR |
GCCTCATCTCTTAGAATCTG+CGG | 0.585167 | 2_3:+18000414 | None:intergenic |
AAACCAACTTGTTCAAGCAC+AGG | 0.588436 | 2_3:+17998861 | None:intergenic |
ATCAATTGCTCGTATATCCA+CGG | 0.588827 | 2_3:+17998335 | None:intergenic |
CCTGCTCCACTCATTAATGT+TGG | 0.589437 | 2_3:+17997440 | None:intergenic |
GGAATGACATTACTAGCACT+TGG | 0.589744 | 2_3:+17998483 | None:intergenic |
TTCTGCACTCAAGAGGATGG+AGG | 0.594618 | 2_3:-17997483 | Msa0282200:three_prime_UTR |
GGCAATGTCTCACTTAACAA+AGG | 0.607328 | 2_3:-17997405 | Msa0282200:intron |
ACTCTTCAGGATGTTTGCAG+AGG | 0.608033 | 2_3:+17998595 | None:intergenic |
TTTATTGGTTGGATCTCACA+TGG | 0.610664 | 2_3:-17999837 | Msa0282200:intron |
GAAAACAAAGAAGCACATGA+AGG | 0.610863 | 2_3:+18001561 | None:intergenic |
TCCGCAGATTCTAAGAGATG+AGG | 0.611127 | 2_3:-18000415 | Msa0282200:CDS |
AAGGCTTGTTGAGCTTGGAA+AGG | 0.612966 | 2_3:-18000385 | Msa0282200:intron |
TTATTCTGCACTCAAGAGGA+TGG | 0.613099 | 2_3:-17997486 | Msa0282200:three_prime_UTR |
AAATGTACATGGTCGAGTTG+AGG | 0.615458 | 2_3:-17999882 | Msa0282200:CDS |
AATAAGATTTATCGCCCTCG+TGG | 0.616684 | 2_3:+18000026 | None:intergenic |
GTGTCGTTAAAGGCATAGCT+GGG | 0.619543 | 2_3:-17998830 | Msa0282200:CDS |
TCTGCACTCAAGAGGATGGA+GGG | 0.619874 | 2_3:-17997482 | Msa0282200:three_prime_UTR |
GAACTCGATAGAAGCTGCGG+AGG | 0.620673 | 2_3:-17999058 | Msa0282200:CDS |
ATGCTGTTTGTGCGATGTCG+CGG | 0.620832 | 2_3:-17997274 | Msa0282200:three_prime_UTR |
ATGCCTTTAACGACACCAAG+TGG | 0.623755 | 2_3:+17998837 | None:intergenic |
AACGTCTTTCAGGAATGTAA+CGG | 0.625428 | 2_3:-17999100 | Msa0282200:intron |
CATAAGTCACTCTCCACAAG+AGG | 0.625552 | 2_3:-17997248 | Msa0282200:three_prime_UTR |
CACCATAGGATCTTGACGCA+TGG | 0.629370 | 2_3:+17998650 | None:intergenic |
GATTCTAAGAGATGAGGCAG+TGG | 0.632621 | 2_3:-18000409 | Msa0282200:CDS |
GTCACGGTTAAAGGCTCACA+AGG | 0.633455 | 2_3:-17998696 | Msa0282200:CDS |
ATGCTAGTGGCTATCTAGAG+AGG | 0.636846 | 2_3:-18000068 | Msa0282200:CDS |
AGGAGAATAATTTGAGAACA+CGG | 0.640264 | 2_3:+17997040 | None:intergenic |
GAAGTACCAACATTAATGAG+TGG | 0.642265 | 2_3:-17997446 | Msa0282200:three_prime_UTR |
TAAGAGATGAGGCAGTGGCA+AGG | 0.651166 | 2_3:-18000404 | Msa0282200:CDS |
GTTGCAGGTTACATATACCG+TGG | 0.655260 | 2_3:-17998352 | Msa0282200:intron |
AGAGAACTCGATAGAAGCTG+CGG | 0.656218 | 2_3:-17999061 | Msa0282200:CDS |
TATGATCCAAAATCTGTTTG+GGG | 0.656816 | 2_3:-17999015 | Msa0282200:CDS |
TGTTAAGTGAGACATTGCCA+TGG | 0.658188 | 2_3:+17997409 | None:intergenic |
CATCAAATTACAAACAGTCA+GGG | 0.659874 | 2_3:+18001936 | None:intergenic |
CAACATTAATGAGTGGAGCA+GGG | 0.661114 | 2_3:-17997439 | Msa0282200:three_prime_UTR |
AATTGATGATACAGGACGTG+AGG | 0.664831 | 2_3:-17998319 | Msa0282200:three_prime_UTR |
ATTATTCTCCTATCAAGAGG+AGG | 0.665582 | 2_3:-17997028 | Msa0282200:three_prime_UTR |
TGCCTTTAACGACACCAAGT+GGG | 0.666563 | 2_3:+17998838 | None:intergenic |
GAAGAGTACCTTTCTTACGA+TGG | 0.667691 | 2_3:-17998579 | Msa0282200:CDS |
GAACAGGTTAGCGATGCTAG+TGG | 0.671726 | 2_3:-18000081 | Msa0282200:intron |
TTTGAGTCATGCATCCACGA+GGG | 0.675190 | 2_3:-18000040 | Msa0282200:CDS |
CTGTTTGTGCGATGTCGCGG+AGG | 0.676245 | 2_3:-17997271 | Msa0282200:three_prime_UTR |
ATTGAAAGAACAGCATGTGG+TGG | 0.691465 | 2_3:+18001783 | None:intergenic |
CTGTTGGTGAAATATCAACA+TGG | 0.708340 | 2_3:-17998506 | Msa0282200:CDS |
TGAATTGAAAGAACAGCATG+TGG | 0.716001 | 2_3:+18001780 | None:intergenic |
CATGCGTCAAGATCCTATGG+TGG | 0.726797 | 2_3:-17998649 | Msa0282200:CDS |
GCTGGACCCTACAAACTGAG+TGG | 0.730023 | 2_3:+18001854 | None:intergenic |
GCTAGACGATGATATCTGGG+CGG | 0.762672 | 2_3:-17997221 | Msa0282200:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTGTTATTTTTGATTTA+TGG | - | chr2_3:17996748-17996767 | Msa0282200:three_prime_UTR | 10.0% |
!! | TTATAAAATTCTTAGAATTT+AGG | - | chr2_3:18000591-18000610 | Msa0282200:intron | 10.0% |
!! | TATAAAATTCTTAGAATTTA+GGG | - | chr2_3:18000592-18000611 | Msa0282200:intron | 10.0% |
!! | TATAAATACTTATAGTAAAT+AGG | - | chr2_3:18001005-18001024 | Msa0282200:intron | 10.0% |
!! | ATAATCAAATGTTAATATAT+TGG | - | chr2_3:18001363-18001382 | Msa0282200:intron | 10.0% |
!! | AAATTTAATTGTTACAAAAT+TGG | + | chr2_3:18001709-18001728 | None:intergenic | 10.0% |
!! | TAAAAATAACATCTGAATAA+AGG | - | chr2_3:17997219-17997238 | Msa0282200:three_prime_UTR | 15.0% |
!!! | AACATGAAGTTTTTTTTTAT+GGG | - | chr2_3:18001934-18001953 | Msa0282200:five_prime_UTR | 15.0% |
!! | TTCATATATACCTTATTGTT+CGG | - | chr2_3:17996946-17996965 | Msa0282200:three_prime_UTR | 20.0% |
!!! | TTTGTTTTTGTTTTGATTCT+TGG | - | chr2_3:17997298-17997317 | Msa0282200:intron | 20.0% |
!! | TAAGAAAATTGTATGTATGT+TGG | - | chr2_3:17998121-17998140 | Msa0282200:intron | 20.0% |
!! | AACTACAGTATAAATATTGA+TGG | + | chr2_3:17998387-17998406 | None:intergenic | 20.0% |
!!! | GAGAAATTATTTAGAGTTAA+AGG | + | chr2_3:17998754-17998773 | None:intergenic | 20.0% |
!! | TTTATTTATAAACGTCTTTC+AGG | - | chr2_3:17999597-17999616 | Msa0282200:CDS | 20.0% |
!! | AAACAGCATATCATTAATAT+CGG | + | chr2_3:17999984-18000003 | None:intergenic | 20.0% |
!! | TTATGCTTAAAGAATATGTT+TGG | + | chr2_3:18000512-18000531 | None:intergenic | 20.0% |
!!! | AGTAAATAGGTATTTTTTGT+TGG | - | chr2_3:18001018-18001037 | Msa0282200:intron | 20.0% |
!! | TATTTGTAGCATGTAATTAT+AGG | - | chr2_3:18001579-18001598 | Msa0282200:five_prime_UTR | 20.0% |
!! | TTAATTGTTACAAAATTGGT+TGG | + | chr2_3:18001705-18001724 | None:intergenic | 20.0% |
!!! | CAACATGAAGTTTTTTTTTA+TGG | - | chr2_3:18001933-18001952 | Msa0282200:five_prime_UTR | 20.0% |
!! | AATTCTCTTTTCAATCTCAA+AGG | + | chr2_3:17996979-17996998 | None:intergenic | 25.0% |
! | ACAAAGAAACATGAAAGAAA+AGG | + | chr2_3:17997182-17997201 | None:intergenic | 25.0% |
!! | AATGTTAAGATACCCTTTTA+AGG | - | chr2_3:17997333-17997352 | Msa0282200:intron | 25.0% |
!! | TTTTGCTAACATCATAGAAA+AGG | + | chr2_3:17997368-17997387 | None:intergenic | 25.0% |
! | ATGTTTGAGAACAAATGAAA+AGG | - | chr2_3:17997484-17997503 | Msa0282200:three_prime_UTR | 25.0% |
! | TGTTTGAGAACAAATGAAAA+GGG | - | chr2_3:17997485-17997504 | Msa0282200:three_prime_UTR | 25.0% |
!! | AGTTACTAGTTTCTGAAAAT+TGG | - | chr2_3:17998075-17998094 | Msa0282200:intron | 25.0% |
!!! | TATGTTGGCTTAATTTAACT+TGG | - | chr2_3:17998136-17998155 | Msa0282200:intron | 25.0% |
!!! | CTTAATTTAACTTGGAAGTA+GGG | - | chr2_3:17998144-17998163 | Msa0282200:intron | 25.0% |
!!! | TTAATTTAACTTGGAAGTAG+GGG | - | chr2_3:17998145-17998164 | Msa0282200:intron | 25.0% |
! | AAACTGGAGATTTAGAAAAA+CGG | - | chr2_3:17998258-17998277 | Msa0282200:three_prime_UTR | 25.0% |
! | CATTGAGTAAATATCCAAAT+TGG | - | chr2_3:17998414-17998433 | Msa0282200:intron | 25.0% |
! | TTACAATTTCAAGACCAATT+TGG | + | chr2_3:17998431-17998450 | None:intergenic | 25.0% |
! | TACATTATCGATGATTTGAA+AGG | - | chr2_3:17998472-17998491 | Msa0282200:CDS | 25.0% |
!! | TGATCAAAATTTTGCATTTC+AGG | + | chr2_3:17998500-17998519 | None:intergenic | 25.0% |
!! | ATTTGTTACATTGTTCTTAG+TGG | - | chr2_3:17998585-17998604 | Msa0282200:CDS | 25.0% |
! | CGATAAATCTTATTCGAAAA+TGG | - | chr2_3:17998690-17998709 | Msa0282200:CDS | 25.0% |
! | AAATCTTATTCGAAAATGGA+TGG | - | chr2_3:17998694-17998713 | Msa0282200:CDS | 25.0% |
!!! | ATGAGTATGTTATTTTCAGT+TGG | - | chr2_3:17998788-17998807 | Msa0282200:intron | 25.0% |
!!! | TGAGTATGTTATTTTCAGTT+GGG | - | chr2_3:17998789-17998808 | Msa0282200:intron | 25.0% |
! | AGATTTCAAACTACTTTCTT+AGG | - | chr2_3:17999463-17999482 | Msa0282200:intron | 25.0% |
! | TTTCAAATGCTTAAACAAGT+TGG | + | chr2_3:17999930-17999949 | None:intergenic | 25.0% |
! | ACATATCTGATAAATTCGAT+TGG | + | chr2_3:18000432-18000451 | None:intergenic | 25.0% |
! | GAAATGTGTTTATAAGTGAT+GGG | + | chr2_3:18000659-18000678 | None:intergenic | 25.0% |
! | AAATGTGTTTAGATAAGTAG+TGG | + | chr2_3:18000848-18000867 | None:intergenic | 25.0% |
! | TACTTATCTAAACACATTTC+AGG | - | chr2_3:18000849-18000868 | Msa0282200:intron | 25.0% |
! | ACTCTTAATAAAAACGAATG+TGG | - | chr2_3:18000893-18000912 | Msa0282200:intron | 25.0% |
!! | TGTTTTATCCTTTTAGATTG+AGG | + | chr2_3:18000942-18000961 | None:intergenic | 25.0% |
!!! | AAATAGGTATTTTTTGTTGG+TGG | - | chr2_3:18001021-18001040 | Msa0282200:intron | 25.0% |
!!! | AATAGGTATTTTTTGTTGGT+GGG | - | chr2_3:18001022-18001041 | Msa0282200:intron | 25.0% |
!! | TAGATTTTCCAGAAATGATA+AGG | + | chr2_3:18001524-18001543 | None:intergenic | 25.0% |
! | TTTGATCATATGTATGATCA+TGG | + | chr2_3:18001763-18001782 | None:intergenic | 25.0% |
! | GTACTTGATAAATTGAAGAA+AGG | - | chr2_3:18001792-18001811 | Msa0282200:five_prime_UTR | 25.0% |
! | AAATGTAAGCATGAATAAAC+TGG | + | chr2_3:18001827-18001846 | None:intergenic | 25.0% |
! | AAGTATATGTGAACATTGTA+AGG | - | chr2_3:18001963-18001982 | Msa0282200:five_prime_UTR | 25.0% |
CATCAAATTACAAACAGTCA+GGG | + | chr2_3:17996774-17996793 | None:intergenic | 30.0% | |
TCATCAAATTACAAACAGTC+AGG | + | chr2_3:17996775-17996794 | None:intergenic | 30.0% | |
AAAGAGAATTAGCGAAAACT+CGG | - | chr2_3:17996989-17997008 | Msa0282200:three_prime_UTR | 30.0% | |
!! | AAGGAGTTGATAGAATATAC+AGG | + | chr2_3:17997130-17997149 | None:intergenic | 30.0% |
TTGATTCTTGGAATCTTTGA+TGG | - | chr2_3:17997310-17997329 | Msa0282200:intron | 30.0% | |
AGGAATCTGAATCCTTAAAA+GGG | + | chr2_3:17997348-17997367 | None:intergenic | 30.0% | |
AAGGAATCTGAATCCTTAAA+AGG | + | chr2_3:17997349-17997368 | None:intergenic | 30.0% | |
ATATAATCACATGTGTCATC+TGG | + | chr2_3:17997774-17997793 | None:intergenic | 30.0% | |
TGTTGAATATTAGTTCGACT+TGG | - | chr2_3:17997891-17997910 | Msa0282200:intron | 30.0% | |
ACCTTGGTTCAAATTGTATT+TGG | - | chr2_3:17998017-17998036 | Msa0282200:intron | 30.0% | |
TCCAAATACAATTTGAACCA+AGG | + | chr2_3:17998021-17998040 | None:intergenic | 30.0% | |
! | GTTTCTGAAAATTGGTATAC+AGG | - | chr2_3:17998083-17998102 | Msa0282200:intron | 30.0% |
! | AAATTGGTATACAGGTTTTG+TGG | - | chr2_3:17998091-17998110 | Msa0282200:intron | 30.0% |
!! | GCTTAATTTAACTTGGAAGT+AGG | - | chr2_3:17998143-17998162 | Msa0282200:intron | 30.0% |
! | TTCAATTCCTAACCATTTTC+AGG | + | chr2_3:17998240-17998259 | None:intergenic | 30.0% |
AAATGGTTAGGAATTGAAAC+TGG | - | chr2_3:17998242-17998261 | Msa0282200:three_prime_UTR | 30.0% | |
AACTGGAGATTTAGAAAAAC+GGG | - | chr2_3:17998259-17998278 | Msa0282200:three_prime_UTR | 30.0% | |
AAAGATGAGTTCTTGAAGTT+AGG | + | chr2_3:17998350-17998369 | None:intergenic | 30.0% | |
TTGTTCTTAGTGGTTAATGT+TGG | - | chr2_3:17998595-17998614 | Msa0282200:CDS | 30.0% | |
TTAGAGTTAAAGGAGTTAGA+AGG | + | chr2_3:17998744-17998763 | None:intergenic | 30.0% | |
GTTTCATTCAATGTTAGTTG+AGG | + | chr2_3:17998915-17998934 | None:intergenic | 30.0% | |
AACCATTTCTTGACAGTTAA+TGG | - | chr2_3:17998937-17998956 | Msa0282200:intron | 30.0% | |
TACCATTAACTGTCAAGAAA+TGG | + | chr2_3:17998942-17998961 | None:intergenic | 30.0% | |
!! | ACTTTGATGGGTACTTATTT+TGG | - | chr2_3:17998995-17999014 | Msa0282200:intron | 30.0% |
TTGAAAGTTATGCATGTCAA+TGG | - | chr2_3:17999085-17999104 | Msa0282200:CDS | 30.0% | |
TAATGATATAGTCTGATGCA+CGG | - | chr2_3:17999182-17999201 | Msa0282200:intron | 30.0% | |
CTCTTGTATGTGTATTCATT+TGG | - | chr2_3:17999275-17999294 | Msa0282200:CDS | 30.0% | |
ATGATTCATTGAAAGGAATC+GGG | + | chr2_3:17999341-17999360 | None:intergenic | 30.0% | |
GATGATTCATTGAAAGGAAT+CGG | + | chr2_3:17999342-17999361 | None:intergenic | 30.0% | |
CAAGATGATGATTCATTGAA+AGG | + | chr2_3:17999348-17999367 | None:intergenic | 30.0% | |
CTTTCAATGAATCATCATCT+TGG | - | chr2_3:17999346-17999365 | Msa0282200:intron | 30.0% | |
!!! | GAATGATGCCACTTTTTTAT+TGG | - | chr2_3:17999377-17999396 | Msa0282200:intron | 30.0% |
AGATGACACCAATAAAAAAG+TGG | + | chr2_3:17999388-17999407 | None:intergenic | 30.0% | |
! | ATTGCATTTTGTGATGAAGA+GGG | - | chr2_3:17999436-17999455 | Msa0282200:intron | 30.0% |
! | TATTTTACCTGCTACAACAT+TGG | - | chr2_3:17999504-17999523 | Msa0282200:intron | 30.0% |
!!! | AGAGGTATCAAGGAAATTTT+TGG | - | chr2_3:17999539-17999558 | Msa0282200:intron | 30.0% |
AGTATGATCCAAAATCTGTT+TGG | - | chr2_3:17999690-17999709 | Msa0282200:intron | 30.0% | |
GTATGATCCAAAATCTGTTT+GGG | - | chr2_3:17999691-17999710 | Msa0282200:intron | 30.0% | |
TATGATCCAAAATCTGTTTG+GGG | - | chr2_3:17999692-17999711 | Msa0282200:intron | 30.0% | |
!!! | CGGATTTCAGTTCTTTTTTA+CGG | + | chr2_3:17999964-17999983 | None:intergenic | 30.0% |
!!! | AATGATATGCTGTTTTGTGT+AGG | - | chr2_3:17999989-18000008 | Msa0282200:intron | 30.0% |
TGCTGAACAAATTGTACTTA+TGG | - | chr2_3:18000085-18000104 | Msa0282200:intron | 30.0% | |
! | TGTGATGATAATGTGATGAT+TGG | - | chr2_3:18000333-18000352 | Msa0282200:intron | 30.0% |
GCTTAAAGAATATGTTTGGT+CGG | + | chr2_3:18000508-18000527 | None:intergenic | 30.0% | |
ATACCTTATCCTTACAAAAC+CGG | - | chr2_3:18000616-18000635 | Msa0282200:intron | 30.0% | |
GGAAATGTGTTTATAAGTGA+TGG | + | chr2_3:18000660-18000679 | None:intergenic | 30.0% | |
! | GTTTATCCAAGACACATTTT+AGG | + | chr2_3:18000754-18000773 | None:intergenic | 30.0% |
GTCTCAAATTTGATGAGATA+AGG | + | chr2_3:18000875-18000894 | None:intergenic | 30.0% | |
!!! | GTTTGTTTTAGATCTTGTCT+AGG | - | chr2_3:18001079-18001098 | Msa0282200:intron | 30.0% |
!! | AGGTTTTTCAGTTTGTTTTC+TGG | - | chr2_3:18001099-18001118 | Msa0282200:intron | 30.0% |
TTAGAATATGACAACGTATG+AGG | - | chr2_3:18001394-18001413 | Msa0282200:intron | 30.0% | |
TTTAGCAACCTTATCATTTC+TGG | - | chr2_3:18001513-18001532 | Msa0282200:intron | 30.0% | |
AGGAGAATAATTTGAGAACA+CGG | + | chr2_3:18001670-18001689 | None:intergenic | 30.0% | |
CAAATTATTCTCCTATCAAG+AGG | - | chr2_3:18001676-18001695 | Msa0282200:five_prime_UTR | 30.0% | |
TGAATTGAAAGAACAGCATG+TGG | + | chr2_3:17996930-17996949 | None:intergenic | 35.0% | |
! | GAAAACAAAGAAGCACATGA+AGG | + | chr2_3:17997149-17997168 | None:intergenic | 35.0% |
!!! | TCATGTGCTTCTTTGTTTTC+TGG | - | chr2_3:17997149-17997168 | Msa0282200:three_prime_UTR | 35.0% |
AGTCAAAGCAAGAACAACAA+TGG | + | chr2_3:17997541-17997560 | None:intergenic | 35.0% | |
! | TCTTGCTTTGACTCTTTTTC+TGG | - | chr2_3:17997548-17997567 | Msa0282200:three_prime_UTR | 35.0% |
!!! | GTTGTGATGTGTGTTTTTTG+TGG | - | chr2_3:17997688-17997707 | Msa0282200:intron | 35.0% |
ACTTGGATGTCTTCAAATCA+TGG | - | chr2_3:17997908-17997927 | Msa0282200:intron | 35.0% | |
GCTAAATGCTTACCTGAAAA+TGG | - | chr2_3:17998225-17998244 | Msa0282200:intron | 35.0% | |
ATGCTTACCTGAAAATGGTT+AGG | - | chr2_3:17998230-17998249 | Msa0282200:intron | 35.0% | |
ACTGGAGATTTAGAAAAACG+GGG | - | chr2_3:17998260-17998279 | Msa0282200:three_prime_UTR | 35.0% | |
! | CCAGCAACATTCACATTTTA+TGG | + | chr2_3:17998563-17998582 | None:intergenic | 35.0% |
CCATAAAATGTGAATGTTGC+TGG | - | chr2_3:17998560-17998579 | Msa0282200:CDS | 35.0% | |
TTAGTGGTTAATGTTGGTGT+TGG | - | chr2_3:17998601-17998620 | Msa0282200:CDS | 35.0% | |
!!! | GTATGTTATTTTCAGTTGGG+TGG | - | chr2_3:17998792-17998811 | Msa0282200:intron | 35.0% |
! | TGCAAATGCAGAAGCTTTAT+TGG | - | chr2_3:17998855-17998874 | Msa0282200:CDS | 35.0% |
!! | AATGCAGAAGCTTTATTGGT+TGG | - | chr2_3:17998859-17998878 | Msa0282200:CDS | 35.0% |
! | TTTATTGGTTGGATCTCACA+TGG | - | chr2_3:17998870-17998889 | Msa0282200:CDS | 35.0% |
ATTCATGTCTCTGACTTTGA+TGG | - | chr2_3:17998982-17999001 | Msa0282200:intron | 35.0% | |
TTCATGTCTCTGACTTTGAT+GGG | - | chr2_3:17998983-17999002 | Msa0282200:intron | 35.0% | |
!!! | GATGGGTACTTATTTTGGTT+AGG | - | chr2_3:17999000-17999019 | Msa0282200:intron | 35.0% |
GTTGATGCTGGTAAATTTGA+TGG | - | chr2_3:17999031-17999050 | Msa0282200:CDS | 35.0% | |
ATGGAAAGCTGCAAAATCTA+AGG | - | chr2_3:17999104-17999123 | Msa0282200:intron | 35.0% | |
TAGTGAATTGGGATTCAAGA+TGG | + | chr2_3:17999310-17999329 | None:intergenic | 35.0% | |
AATCATCATCTTGGAAATGC+TGG | - | chr2_3:17999355-17999374 | Msa0282200:intron | 35.0% | |
TCATGTGATCTAATCTTTGC+AGG | - | chr2_3:17999411-17999430 | Msa0282200:intron | 35.0% | |
! | GATTGCATTTTGTGATGAAG+AGG | - | chr2_3:17999435-17999454 | Msa0282200:intron | 35.0% |
!! | ATACCTGATAAGAGGTATCA+AGG | - | chr2_3:17999529-17999548 | Msa0282200:intron | 35.0% |
TTTCCTTGATACCTCTTATC+AGG | + | chr2_3:17999535-17999554 | None:intergenic | 35.0% | |
AACGTCTTTCAGGAATGTAA+CGG | - | chr2_3:17999607-17999626 | Msa0282200:CDS | 35.0% | |
! | ACATAACCCCAAACAGATTT+TGG | + | chr2_3:17999701-17999720 | None:intergenic | 35.0% |
TTTGCGTTAGTCGTTTATAG+TGG | - | chr2_3:17999737-17999756 | Msa0282200:intron | 35.0% | |
TAGTCGTTTATAGTGGTGTT+TGG | - | chr2_3:17999744-17999763 | Msa0282200:intron | 35.0% | |
AGTTCACTTGTTTGTACTGT+TGG | - | chr2_3:18000185-18000204 | Msa0282200:intron | 35.0% | |
! | CTGTTGGTGAAATATCAACA+TGG | - | chr2_3:18000201-18000220 | Msa0282200:intron | 35.0% |
TTTCCAAAAAGCTGTTGATC+TGG | - | chr2_3:18000266-18000285 | Msa0282200:intron | 35.0% | |
! | ATAATGTGATGATTGGTTGC+AGG | - | chr2_3:18000340-18000359 | Msa0282200:intron | 35.0% |
ATCAATTGCTCGTATATCCA+CGG | + | chr2_3:18000375-18000394 | None:intergenic | 35.0% | |
! | ATACGAGCAATTGATGATAC+AGG | - | chr2_3:18000380-18000399 | Msa0282200:intron | 35.0% |
ACCATACCTTGTGTTCAATA+AGG | + | chr2_3:18000475-18000494 | None:intergenic | 35.0% | |
TGATGTCTTTCTAAGTGAGA+GGG | - | chr2_3:18000546-18000565 | Msa0282200:intron | 35.0% | |
!! | AAACCGGTTTTGTAAGGATA+AGG | + | chr2_3:18000622-18000641 | None:intergenic | 35.0% |
GTCTCACGTAGTATGAAATA+GGG | + | chr2_3:18000686-18000705 | None:intergenic | 35.0% | |
AGTCTCACGTAGTATGAAAT+AGG | + | chr2_3:18000687-18000706 | None:intergenic | 35.0% | |
!! | CCAGTTTTGTAGAGATTAGT+TGG | + | chr2_3:18000806-18000825 | None:intergenic | 35.0% |
CCAACTAATCTCTACAAAAC+TGG | - | chr2_3:18000803-18000822 | Msa0282200:intron | 35.0% | |
! | ACAAGATCTAAAACAAACCC+AGG | + | chr2_3:18001077-18001096 | None:intergenic | 35.0% |
GGTGAACACAGAAAAATCAT+TGG | + | chr2_3:18001138-18001157 | None:intergenic | 35.0% | |
! | GAAGTACCAACATTAATGAG+TGG | - | chr2_3:18001261-18001280 | Msa0282200:five_prime_UTR | 35.0% |
AATTTGAGAACACGGCTATA+AGG | + | chr2_3:18001662-18001681 | None:intergenic | 35.0% | |
ATTATTCTCCTATCAAGAGG+AGG | - | chr2_3:18001679-18001698 | Msa0282200:five_prime_UTR | 35.0% | |
ACAGAACCACTCAGTTTGTA+GGG | - | chr2_3:17996847-17996866 | Msa0282200:three_prime_UTR | 40.0% | |
ATTGAAAGAACAGCATGTGG+TGG | + | chr2_3:17996927-17996946 | None:intergenic | 40.0% | |
AGGAACAGAACCGAACAATA+AGG | + | chr2_3:17996959-17996978 | None:intergenic | 40.0% | |
ATTTCGATGCAACAGAAACC+TGG | - | chr2_3:17997416-17997435 | Msa0282200:three_prime_UTR | 40.0% | |
AAACATCAAACAAGCTGAGC+TGG | + | chr2_3:17997470-17997489 | None:intergenic | 40.0% | |
!! | TTGTTAGCTCTGTAGCACTA+AGG | - | chr2_3:17997725-17997744 | Msa0282200:intron | 40.0% |
GGCTTCATGGATGTTTATGA+TGG | - | chr2_3:17997862-17997881 | Msa0282200:intron | 40.0% | |
! | CGTACGGCAATTTAAAACCT+TGG | - | chr2_3:17998001-17998020 | Msa0282200:intron | 40.0% |
TCACTCTCTTATTGCATTGC+TGG | + | chr2_3:17998053-17998072 | None:intergenic | 40.0% | |
!! | AATGTTGGTGTTGGATGAAC+AGG | - | chr2_3:17998610-17998629 | Msa0282200:CDS | 40.0% |
AATAAGATTTATCGCCCTCG+TGG | + | chr2_3:17998684-17998703 | None:intergenic | 40.0% | |
GACCAAATGGGAAATGTACA+TGG | - | chr2_3:17998814-17998833 | Msa0282200:intron | 40.0% | |
GACCATGTACATTTCCCATT+TGG | + | chr2_3:17998819-17998838 | None:intergenic | 40.0% | |
! | AAATGTACATGGTCGAGTTG+AGG | - | chr2_3:17998825-17998844 | Msa0282200:CDS | 40.0% |
!! | AATGTACATGGTCGAGTTGA+GGG | - | chr2_3:17998826-17998845 | Msa0282200:CDS | 40.0% |
! | GGTAAATTTGATGGAGCACT+AGG | - | chr2_3:17999040-17999059 | Msa0282200:CDS | 40.0% |
GGGATTCAGCATAGTGAATT+GGG | + | chr2_3:17999321-17999340 | None:intergenic | 40.0% | |
CAAACTACTTTCTTAGGCAG+TGG | - | chr2_3:17999469-17999488 | Msa0282200:intron | 40.0% | |
CATTGGAGATACCTGATAAG+AGG | - | chr2_3:17999521-17999540 | Msa0282200:intron | 40.0% | |
AGCTGCAGCACATAAGAAAT+GGG | + | chr2_3:17999810-17999829 | None:intergenic | 40.0% | |
AAGCTGCAGCACATAAGAAA+TGG | + | chr2_3:17999811-17999830 | None:intergenic | 40.0% | |
! | AAACCAACTTGTTCAAGCAC+AGG | + | chr2_3:17999849-17999868 | None:intergenic | 40.0% |
!!! | ATGCTGTTTTGTGTAGGTCA+CGG | - | chr2_3:17999995-18000014 | Msa0282200:CDS | 40.0% |
TTTGTGTAGGTCACGGTTAA+AGG | - | chr2_3:18000002-18000021 | Msa0282200:CDS | 40.0% | |
!! | TCGTAAGAAAGGTACTCTTC+AGG | + | chr2_3:18000128-18000147 | None:intergenic | 40.0% |
!! | GAAGAGTACCTTTCTTACGA+TGG | - | chr2_3:18000128-18000147 | Msa0282200:intron | 40.0% |
GGAATGACATTACTAGCACT+TGG | + | chr2_3:18000227-18000246 | None:intergenic | 40.0% | |
AGTGCTAGTAATGTCATTCC+AGG | - | chr2_3:18000227-18000246 | Msa0282200:intron | 40.0% | |
! | TCACCAGATCAACAGCTTTT+TGG | + | chr2_3:18000272-18000291 | None:intergenic | 40.0% |
TTGATCTGGTGATCTTCAAG+TGG | - | chr2_3:18000280-18000299 | Msa0282200:intron | 40.0% | |
! | AATTGATGATACAGGACGTG+AGG | - | chr2_3:18000388-18000407 | Msa0282200:CDS | 40.0% |
! | TTCCTGCCTTATTGAACACA+AGG | - | chr2_3:18000466-18000485 | Msa0282200:intron | 40.0% |
TACCTTGTGTTCAATAAGGC+AGG | + | chr2_3:18000471-18000490 | None:intergenic | 40.0% | |
! | GCCTTATTGAACACAAGGTA+TGG | - | chr2_3:18000471-18000490 | Msa0282200:intron | 40.0% |
CTGATGTCTTTCTAAGTGAG+AGG | - | chr2_3:18000545-18000564 | Msa0282200:intron | 40.0% | |
!! | CCTTACAAACCGGTTTTGTA+AGG | + | chr2_3:18000628-18000647 | None:intergenic | 40.0% |
!! | CCTTACAAAACCGGTTTGTA+AGG | - | chr2_3:18000625-18000644 | Msa0282200:intron | 40.0% |
ACGTAGTATGAAATAGGGAC+TGG | + | chr2_3:18000681-18000700 | None:intergenic | 40.0% | |
!! | CCAAGACACATTTTAGGTCT+TGG | + | chr2_3:18000748-18000767 | None:intergenic | 40.0% |
CCAAGACCTAAAATGTGTCT+TGG | - | chr2_3:18000745-18000764 | Msa0282200:intron | 40.0% | |
!! | CTCTACAAAACTGGCTTGTA+AGG | - | chr2_3:18000812-18000831 | Msa0282200:intron | 40.0% |
AGGTCGAACCTCAATCTAAA+AGG | - | chr2_3:18000931-18000950 | Msa0282200:intron | 40.0% | |
ACACTACTTACCACTATGCT+AGG | - | chr2_3:18000962-18000981 | Msa0282200:intron | 40.0% | |
CTAAAACAAACCCAGGCATA+AGG | + | chr2_3:18001070-18001089 | None:intergenic | 40.0% | |
TTCAGCTGTGAACTTAGTTC+TGG | + | chr2_3:18001192-18001211 | None:intergenic | 40.0% | |
TTATTCTGCACTCAAGAGGA+TGG | - | chr2_3:18001221-18001240 | Msa0282200:five_prime_UTR | 40.0% | |
CAACATTAATGAGTGGAGCA+GGG | - | chr2_3:18001268-18001287 | Msa0282200:five_prime_UTR | 40.0% | |
TGTTAAGTGAGACATTGCCA+TGG | + | chr2_3:18001301-18001320 | None:intergenic | 40.0% | |
GGCAATGTCTCACTTAACAA+AGG | - | chr2_3:18001302-18001321 | Msa0282200:intron | 40.0% | |
CAACGTATGAGGATTTGAAC+AGG | - | chr2_3:18001405-18001424 | Msa0282200:intron | 40.0% | |
GTATGAGGATTTGAACAGGT+GGG | - | chr2_3:18001409-18001428 | Msa0282200:intron | 40.0% | |
ATGTGCTAGACGATGATATC+TGG | - | chr2_3:18001482-18001501 | Msa0282200:intron | 40.0% | |
TGTGCTAGACGATGATATCT+GGG | - | chr2_3:18001483-18001502 | Msa0282200:intron | 40.0% | |
CTTATGCTGCAAGCTGTAAT+AGG | - | chr2_3:18001871-18001890 | Msa0282200:five_prime_UTR | 40.0% | |
CACAGAACCACTCAGTTTGT+AGG | - | chr2_3:17996846-17996865 | Msa0282200:three_prime_UTR | 45.0% | |
TCATAGTGTGTGTGTGTGTG+TGG | + | chr2_3:17997073-17997092 | None:intergenic | 45.0% | |
GCAACAGAAACCTGGAAAAG+AGG | - | chr2_3:17997424-17997443 | Msa0282200:three_prime_UTR | 45.0% | |
TCACATGTGTCATCTGGTGT+TGG | + | chr2_3:17997768-17997787 | None:intergenic | 45.0% | |
! | CGATGTGTCATTATCGTGTC+CGG | - | chr2_3:17997823-17997842 | Msa0282200:intron | 45.0% |
GCTTAAATTGCAGCTGCGTA+CGG | - | chr2_3:17997985-17998004 | Msa0282200:intron | 45.0% | |
! | TCCGCAGATTCTAAGAGATG+AGG | - | chr2_3:17998292-17998311 | Msa0282200:three_prime_UTR | 45.0% |
GCCTCATCTCTTAGAATCTG+CGG | + | chr2_3:17998296-17998315 | None:intergenic | 45.0% | |
! | GATTCTAAGAGATGAGGCAG+TGG | - | chr2_3:17998298-17998317 | Msa0282200:three_prime_UTR | 45.0% |
!! | AAGGCTTGTTGAGCTTGGAA+AGG | - | chr2_3:17998322-17998341 | Msa0282200:three_prime_UTR | 45.0% |
ATGCTAGTGGCTATCTAGAG+AGG | - | chr2_3:17998639-17998658 | Msa0282200:CDS | 45.0% | |
!! | TTTTGAGTCATGCATCCACG+AGG | - | chr2_3:17998666-17998685 | Msa0282200:CDS | 45.0% |
TTTGAGTCATGCATCCACGA+GGG | - | chr2_3:17998667-17998686 | Msa0282200:CDS | 45.0% | |
CGAAAATGGATGGAAGATGC+TGG | - | chr2_3:17998704-17998723 | Msa0282200:intron | 45.0% | |
TTTCAGTTGGGTGGACCAAA+TGG | - | chr2_3:17998801-17998820 | Msa0282200:intron | 45.0% | |
TTCAGTTGGGTGGACCAAAT+GGG | - | chr2_3:17998802-17998821 | Msa0282200:intron | 45.0% | |
TAGGACACTGTTGTTGATGC+TGG | - | chr2_3:17999019-17999038 | Msa0282200:CDS | 45.0% | |
! | AAATCTAAGGCGTCCTGTTG+AGG | - | chr2_3:17999117-17999136 | Msa0282200:intron | 45.0% |
CGGGATTCAGCATAGTGAAT+TGG | + | chr2_3:17999322-17999341 | None:intergenic | 45.0% | |
GGTATCTCCAATGTTGTAGC+AGG | + | chr2_3:17999514-17999533 | None:intergenic | 45.0% | |
AGAGAACTCGATAGAAGCTG+CGG | - | chr2_3:17999646-17999665 | Msa0282200:CDS | 45.0% | |
! | ATCTGTTTGGGGTTATGTCG+AGG | - | chr2_3:17999703-17999722 | Msa0282200:intron | 45.0% |
!! | GAACAAGTTGGTTTCCCACT+TGG | - | chr2_3:17999855-17999874 | Msa0282200:CDS | 45.0% |
!! | TTCCCACTTGGTGTCGTTAA+AGG | - | chr2_3:17999867-17999886 | Msa0282200:CDS | 45.0% |
TGCCTTTAACGACACCAAGT+GGG | + | chr2_3:17999872-17999891 | None:intergenic | 45.0% | |
ATGCCTTTAACGACACCAAG+TGG | + | chr2_3:17999873-17999892 | None:intergenic | 45.0% | |
! | GTGTCGTTAAAGGCATAGCT+GGG | - | chr2_3:17999877-17999896 | Msa0282200:CDS | 45.0% |
CATGGACATTGGAACAGTTC+CGG | + | chr2_3:18000042-18000061 | None:intergenic | 45.0% | |
ACTCTTCAGGATGTTTGCAG+AGG | + | chr2_3:18000115-18000134 | None:intergenic | 45.0% | |
TGCAACGACCATCGTAAGAA+AGG | + | chr2_3:18000139-18000158 | None:intergenic | 45.0% | |
TAGTAATGTCATTCCAGGCC+AGG | - | chr2_3:18000232-18000251 | Msa0282200:intron | 45.0% | |
! | TTGGAAATTTGTCGCTTGCC+TGG | + | chr2_3:18000253-18000272 | None:intergenic | 45.0% |
GTTGCAGGTTACATATACCG+TGG | - | chr2_3:18000355-18000374 | Msa0282200:intron | 45.0% | |
GAGGGAGTAACAGAAAAGTC+AGG | - | chr2_3:18000564-18000583 | Msa0282200:intron | 45.0% | |
ACTGCTCTCACATTCAGAAC+TGG | - | chr2_3:18000715-18000734 | Msa0282200:intron | 45.0% | |
AACTAGCATGCCTAGCATAG+TGG | + | chr2_3:18000975-18000994 | None:intergenic | 45.0% | |
! | TTGTTGGTGGGCCTAAAGTA+AGG | - | chr2_3:18001034-18001053 | Msa0282200:intron | 45.0% |
TGGGCCTAAAGTAAGGACTT+GGG | - | chr2_3:18001041-18001060 | Msa0282200:intron | 45.0% | |
AAACAAACCCAGGCATAAGG+TGG | + | chr2_3:18001067-18001086 | None:intergenic | 45.0% | |
CAGCTTATTCTGCACTCAAG+AGG | - | chr2_3:18001217-18001236 | Msa0282200:five_prime_UTR | 45.0% | |
CCTGCTCCACTCATTAATGT+TGG | + | chr2_3:18001270-18001289 | None:intergenic | 45.0% | |
CCAACATTAATGAGTGGAGC+AGG | - | chr2_3:18001267-18001286 | Msa0282200:five_prime_UTR | 45.0% | |
CGTATGAGGATTTGAACAGG+TGG | - | chr2_3:18001408-18001427 | Msa0282200:intron | 45.0% | |
CATAAGTCACTCTCCACAAG+AGG | - | chr2_3:18001459-18001478 | Msa0282200:intron | 45.0% | |
!! | ATAAAAAAAAAAAAAAAAAG+TGG | - | chr2_3:17997622-17997641 | Msa0282200:intron | 5.0% |
CATGCACGAGTGAGAAATGC+TGG | + | chr2_3:17996874-17996893 | None:intergenic | 50.0% | |
GAAAGAACAGCATGTGGTGG+AGG | + | chr2_3:17996924-17996943 | None:intergenic | 50.0% | |
TGTGTGTGTGTGTGTGGCTA+TGG | + | chr2_3:17997067-17997086 | None:intergenic | 50.0% | |
! | TTCAGGTACGCCTCTTTTCC+AGG | + | chr2_3:17997437-17997456 | None:intergenic | 50.0% |
!! | GAGCTGGCGTTTGTTGATTC+AGG | + | chr2_3:17997454-17997473 | None:intergenic | 50.0% |
! | CATGTGTCATCTGGTGTTGG+AGG | + | chr2_3:17997765-17997784 | None:intergenic | 50.0% |
TAAGAGATGAGGCAGTGGCA+AGG | - | chr2_3:17998303-17998322 | Msa0282200:three_prime_UTR | 50.0% | |
GAACAGGTTAGCGATGCTAG+TGG | - | chr2_3:17998626-17998645 | Msa0282200:CDS | 50.0% | |
CTTGACACACTGACCTCAAC+AGG | + | chr2_3:17999133-17999152 | None:intergenic | 50.0% | |
AGGTCAGTGTGTCAAGCAAC+TGG | - | chr2_3:17999137-17999156 | Msa0282200:intron | 50.0% | |
!! | TTAGGCAGTGGTGCTATAGC+TGG | - | chr2_3:17999481-17999500 | Msa0282200:intron | 50.0% |
CTGCAGCTTCACATTGAGCA+GGG | - | chr2_3:17999822-17999841 | Msa0282200:intron | 50.0% | |
GGTCCTGTGCTTGAACAAGT+TGG | - | chr2_3:17999843-17999862 | Msa0282200:CDS | 50.0% | |
!! | GGTGTCGTTAAAGGCATAGC+TGG | - | chr2_3:17999876-17999895 | Msa0282200:CDS | 50.0% |
AGCTGGGCAGACAAGATTGA+AGG | - | chr2_3:17999893-17999912 | Msa0282200:CDS | 50.0% | |
GTCACGGTTAAAGGCTCACA+AGG | - | chr2_3:18000011-18000030 | Msa0282200:CDS | 50.0% | |
AAAGGCTCACAAGGTCATGC+CGG | - | chr2_3:18000020-18000039 | Msa0282200:CDS | 50.0% | |
GGATCTTGACGCATGGACAT+TGG | + | chr2_3:18000053-18000072 | None:intergenic | 50.0% | |
GTCCATGCGTCAAGATCCTA+TGG | - | chr2_3:18000055-18000074 | Msa0282200:CDS | 50.0% | |
CACCATAGGATCTTGACGCA+TGG | + | chr2_3:18000060-18000079 | None:intergenic | 50.0% | |
CATGCGTCAAGATCCTATGG+TGG | - | chr2_3:18000058-18000077 | Msa0282200:CDS | 50.0% | |
GGCAGAGAGACCTTACAAAC+CGG | + | chr2_3:18000638-18000657 | None:intergenic | 50.0% | |
!! | CAAAACTGGCTTGTAAGGCG+AGG | - | chr2_3:18000817-18000836 | Msa0282200:intron | 50.0% |
GTGGGCCTAAAGTAAGGACT+TGG | - | chr2_3:18001040-18001059 | Msa0282200:intron | 50.0% | |
GTGGCCCAAGTCCTTACTTT+AGG | + | chr2_3:18001048-18001067 | None:intergenic | 50.0% | |
TGTTCACCTCAGCATGATGC+AGG | - | chr2_3:18001150-18001169 | Msa0282200:intron | 50.0% | |
TTCTGCACTCAAGAGGATGG+AGG | - | chr2_3:18001224-18001243 | Msa0282200:five_prime_UTR | 50.0% | |
TCTGCACTCAAGAGGATGGA+GGG | - | chr2_3:18001225-18001244 | Msa0282200:five_prime_UTR | 50.0% | |
! | ATGCTGTTTGTGCGATGTCG+CGG | - | chr2_3:18001433-18001452 | Msa0282200:intron | 50.0% |
TCGTCTAGCACATCCTCTTG+TGG | + | chr2_3:18001475-18001494 | None:intergenic | 50.0% | |
GCTAGACGATGATATCTGGG+CGG | - | chr2_3:18001486-18001505 | Msa0282200:intron | 50.0% | |
!! | TTGGTTGGCCTCCTCTTGAT+AGG | + | chr2_3:18001690-18001709 | None:intergenic | 50.0% |
GCTGGACCCTACAAACTGAG+TGG | + | chr2_3:17996856-17996875 | None:intergenic | 55.0% | |
! | AGAACAGCATGTGGTGGAGG+TGG | + | chr2_3:17996921-17996940 | None:intergenic | 55.0% |
! | CATCTGGTGTTGGAGGACAC+AGG | + | chr2_3:17997758-17997777 | None:intergenic | 55.0% |
! | TCCGGTGTCTGTGTCACTCA+GGG | - | chr2_3:17997841-17997860 | Msa0282200:intron | 55.0% |
! | CTGTGTCACTCAGGGCTTCA+TGG | - | chr2_3:17997849-17997868 | Msa0282200:intron | 55.0% |
!! | GTGGCAAGGCTTGTTGAGCT+TGG | - | chr2_3:17998317-17998336 | Msa0282200:three_prime_UTR | 55.0% |
GAACTCGATAGAAGCTGCGG+AGG | - | chr2_3:17999649-17999668 | Msa0282200:CDS | 55.0% | |
GCTGCAGCTTCACATTGAGC+AGG | - | chr2_3:17999821-17999840 | Msa0282200:intron | 55.0% | |
TGTTCAGCAGCAGCCACCAT+AGG | + | chr2_3:18000074-18000093 | None:intergenic | 55.0% | |
! | AATTTGTCGCTTGCCTGGCC+TGG | + | chr2_3:18000248-18000267 | None:intergenic | 55.0% |
TGTGGCTTCTGTTCCAGCAG+AGG | - | chr2_3:18000911-18000930 | Msa0282200:intron | 55.0% | |
GATTGAGGTTCGACCTCTGC+TGG | + | chr2_3:18000927-18000946 | None:intergenic | 55.0% | |
ACTTGGGCCACCTTATGCCT+GGG | - | chr2_3:18001057-18001076 | Msa0282200:intron | 55.0% | |
ACAGCACCTGCATCATGCTG+AGG | + | chr2_3:18001159-18001178 | None:intergenic | 55.0% | |
! | ACAGCATGTGGTGGAGGTGG+CGG | + | chr2_3:17996918-17996937 | None:intergenic | 60.0% |
! | GTCCGGTGTCTGTGTCACTC+AGG | - | chr2_3:17997840-17997859 | Msa0282200:intron | 60.0% |
GCCCTGAGTGACACAGACAC+CGG | + | chr2_3:17997845-17997864 | None:intergenic | 60.0% | |
GACTTGGGCCACCTTATGCC+TGG | - | chr2_3:18001056-18001075 | Msa0282200:intron | 60.0% | |
TGGAGCAGGGCATGATGCCA+TGG | - | chr2_3:18001281-18001300 | Msa0282200:five_prime_UTR | 60.0% | |
CTGTTTGTGCGATGTCGCGG+AGG | - | chr2_3:18001436-18001455 | Msa0282200:intron | 60.0% | |
GACGATGATATCTGGGCGGC+TGG | - | chr2_3:18001490-18001509 | Msa0282200:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 17996743 | 18001986 | 17996743 | ID=Msa0282200;Name=Msa0282200 |
chr2_3 | mRNA | 17996743 | 18001986 | 17996743 | ID=Msa0282200-mRNA-1;Parent=Msa0282200;Name=Msa0282200-mRNA-1;_AED=0.18;_eAED=0.18;_QI=532|1|1|1|0.75|0.76|13|852|328 |
chr2_3 | exon | 17996743 | 17997302 | 17996743 | ID=Msa0282200-mRNA-1:exon:7420;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17997406 | 17997567 | 17997406 | ID=Msa0282200-mRNA-1:exon:7419;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17998242 | 17998367 | 17998242 | ID=Msa0282200-mRNA-1:exon:7418;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17998442 | 17998718 | 17998442 | ID=Msa0282200-mRNA-1:exon:7417;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17998815 | 17998901 | 17998815 | ID=Msa0282200-mRNA-1:exon:7416;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17999005 | 17999110 | 17999005 | ID=Msa0282200-mRNA-1:exon:7415;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17999187 | 17999296 | 17999187 | ID=Msa0282200-mRNA-1:exon:7414;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17999591 | 17999707 | 17999591 | ID=Msa0282200-mRNA-1:exon:7413;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17999838 | 17999922 | 17999838 | ID=Msa0282200-mRNA-1:exon:7412;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 17999994 | 18000097 | 17999994 | ID=Msa0282200-mRNA-1:exon:7411;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 18000386 | 18000477 | 18000386 | ID=Msa0282200-mRNA-1:exon:7410;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 18001197 | 18001313 | 18001197 | ID=Msa0282200-mRNA-1:exon:7409;Parent=Msa0282200-mRNA-1 |
chr2_3 | exon | 18001559 | 18001986 | 18001559 | ID=Msa0282200-mRNA-1:exon:7408;Parent=Msa0282200-mRNA-1 |
chr2_3 | five_prime_UTR | 18001559 | 18001986 | 18001559 | ID=Msa0282200-mRNA-1:five_prime_utr;Parent=Msa0282200-mRNA-1 |
chr2_3 | five_prime_UTR | 18001210 | 18001313 | 18001210 | ID=Msa0282200-mRNA-1:five_prime_utr;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 18001197 | 18001209 | 18001197 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 18000386 | 18000477 | 18000386 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17999994 | 18000097 | 17999994 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17999838 | 17999922 | 17999838 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17999591 | 17999707 | 17999591 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17999187 | 17999296 | 17999187 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17999005 | 17999110 | 17999005 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17998815 | 17998901 | 17998815 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | CDS | 17998446 | 17998718 | 17998446 | ID=Msa0282200-mRNA-1:cds;Parent=Msa0282200-mRNA-1 |
chr2_3 | three_prime_UTR | 17998442 | 17998445 | 17998442 | ID=Msa0282200-mRNA-1:three_prime_utr;Parent=Msa0282200-mRNA-1 |
chr2_3 | three_prime_UTR | 17998242 | 17998367 | 17998242 | ID=Msa0282200-mRNA-1:three_prime_utr;Parent=Msa0282200-mRNA-1 |
chr2_3 | three_prime_UTR | 17997406 | 17997567 | 17997406 | ID=Msa0282200-mRNA-1:three_prime_utr;Parent=Msa0282200-mRNA-1 |
chr2_3 | three_prime_UTR | 17996743 | 17997302 | 17996743 | ID=Msa0282200-mRNA-1:three_prime_utr;Parent=Msa0282200-mRNA-1 |
Gene Sequence |
Protein sequence |